Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0002301

Physical Location & Seq

Genomic Coordinates Reverse (-)

18578733 .. 18580961

Gene Structure 2229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g13700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGGCGACAGGGCGAGTTGATGTTTTGAGGAGGAGTGATTCTTATAATTACTCGAAAAGAGAATTTGAGTATTATAGGAATGGGGTTTCTCGTGGTGATGTAGGTCATGGTCGCAGTGATGAGCTCAAACATAGGAATGGATTCCATCAATCTTCCAATGTGCGCTATTCACGGGGATATGGACGGCTTCCAAATGCCCCAGAGCCATTGGTTAAGAATGGAAAAACCCGAAGGAGTGAAGATGCGGCTCAATTACCTGCCGAGAAGAAAGAGTTTGGCGATGATGTCAAACATAGGAATGGACTCCATCGTTCTTCCAAAATGTGTGATTCACGAGGATCTGGACCGCGGCTTCCAAATGCCCCAGAACTAGTGGTTAAGAATTGCAAAACCCGAAGGAGTGAAGATGCTTATCAATCACCTCCTGAGAAGAAGAGGAAGTTTTCTCCTATTATATGGGACAAAGAAGAGAAGGAAGTGAGAGTCTCATCGAAGAATAGAGTTGTTCCCGTTATTCCTCTGCCCTCCCCTCATCCAGATGTAGCAAGATTACCTGCTATTGCTAAGGTTGAGGATGTTGTTTCTGTTGGAGTTCTTTCCAAGTCTCCGGCTAGAGTGGTGGAGTCTCTGGAAGCGGAGGTTTCCGAAATTTCTGATGTTTCTCAATTTGAGGCACCAGCCGATCTTTCTGCACCACTACATCCTCAGAAGGTTGGGGAAGATGAACAGGTGCAAAAGAACAGGGAAGACAAAGAATTTTTCTATCAACGTGACATCTCATTGTCAAAATGGTCATCCGATAGTGATTCCCCAAGGGATATCTCTGATGACAGCTCGCCTGAAAGTGGGGAGATTCGAATAGAAAGCTCCAGGTTGAGTCGGGCTAGAACTTCTGGCTCTGACAAAGAAGACAGCTTTGAAAAGCCTGGCAGTGGAGACACACTTTATGGAGACGAGTTATGTGATGATGCGCTTATGGATGCTGATAATTATGGTGGGAATGCTGAAGATAGCCGGTTCTACTCTGATTCAGAGGATGATTCTGATCTTTCTCAGATTGAAGAGCCAGAAGTGCCTACACAAAAAAGTATAAACATGCTTCAAGGTTGCAGAAGTGTGTTTGAGTATGAAAGGCTCAACCATATAAGTGAAGGCACTTATGGTGTTGTCTTTAGAGCCAGAGATAAAAAGACCGGAGAAATTGTCGCATTGAAGAAGATGAAGATGGATGTGGATAAGGGATGTGATGGTTTCCCTATGTCGGCATTGAGAGAAATAAACATTCTGTTGTCTTTTAATCACCCTTCTATTGTTGGTGTTAAGGAAGTTGTTATGGATGACTTTGATGGTGTTTATATGGTTATGGAGCATATGGACCATGACTTGAAGGGGCTAATGGAGTCGATGAAGCAGCCATTTAGTATTGGTGAAGTTAAGTACTTGATGAAACAACTTTTGGAGGGTGTAGAGTATCTTCATGACAATTGGATCCTTCACAGAGATCTGAAAACATCAAATATTCTATTGAATAACGAGGGTGAGTTGAAAATATGCGACTTTGGGTTGTCACGACAATATGGGAGTCCACTAAAGCCATATACTTCTTTAGTTGTCACTTTGTGGTACCGGGCACCTGAAATTCTGTTAGGCACAAAACAGTACTCTACAGCAATTGATATGTGGTCAGTAGGTTGCATAATGGCTGAATTATTGGCGAAGGCACCTCTCTTTAGCGGGAAAGATGAAATTGAGCAGCTGGACAAGATCTTCAAAACTCTTGGTACACCAGATGAGAAAAGTGGTTTGTCCAAATTGCCAGGCTTCAAAGCTAATTTTGTTAAGCAACCGTACAATCTTCTGCGCAAGAAATTTCCTGCCGCATCTTTCACTGGATCATGCCCAGTGCTCTCTGAATCTGGGTTTGATTTGCTGAAGAGGCTCTTATGTTATAACCCTGCGGAGCGAATAACAGCGAAGGATGCCCTCAACCATAACTGGTTTCGCGAGTCCCCTGAACCAAGAAGGGATTTCAAGCCAATTACTCCTGATCGACATGTTCAAGACCGGCACCTTAACAGCAGGCGGCGTGAGAAAATTTTACAGCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006139 GO:0006396 GO:0006397 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008380 GO:0009555 GO:0009653 GO:0009889 GO:0009987 GO:0010208 GO:0010467 GO:0010468 GO:0010556 GO:0010584 GO:0010675 GO:0010927 GO:0010962 GO:0016043 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022607 GO:0030198 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0032950 GO:0032951 GO:0032952 GO:0032953 GO:0032989 GO:0034641 GO:0036211 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045229 GO:0046483 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0085029 GO:0090304 GO:0097472 GO:0140096 GO:1901360 GO:1901564 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

703

Amino Acids

79.5

Weight (kDa)

6.14

Isoelectric Point (pI)

57.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370
fragaria_vesca	FvH4_5g07740
malus_domestica	MD06G1147400.v1.1 MD06G1147600.v1.1 MD14G1161600.v1.1
prunus_persica	Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1
pyrus_communis	pycom06g13700
rosa_chinensis	RchiOBHm_Chr7g0190701 RchiOBHm_Chr7g0190711
rosa_laevigata	RLG00000004502
rosa_multiflora	Rmu_co8410623.1_g000001 Rmu_sc0006709.1_g000001 Rmu_sc0014053.1_g000001 Rmu_sc0021017.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264390
rosa_rugosa	Rorug06G0506600 Rorug06G0506700
rosa_samantha	Rh7AG113100 Rh7AG113200 Rh7BG115600 Rh7BG115700 Rh7CG118100 Rh7CG118200 Rh7DG117000 Rh7DG117100
rosa_wichuraiana	Rw7G009870 Rw7G009880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	45, 1950
Acc16I	TGCGCA	1 cut(s)	1862
Acc36I	ACCTGC	2 cut(s)	265, 562
Acc65I	GGTACC	1 cut(s)	1623
AccB1I	GGYRCC	5 cut(s)	673, 1623, 1630, 1720, 2067
AccII	CGCG	2 cut(s)	349, 2004
AciI	CCGC	8 cut(s)	245, 347, 349, 635, 1734, 1878, 1958, 2083
AclWI	GGATC	4 cut(s)	346, 1483, 1496, 1900
AcsI	RAATTY	6 cut(s)	62, 648, 755, 1638, 1868, 2094
AcuI	CTGAAG	2 cut(s)	1026, 1952
AdeI	CACNNNGTG	1 cut(s)	1620
AfaI	GTAC	5 cut(s)	1439, 1625, 1661, 1783, 1850
AfiI	CCNNNNNNNGG	3 cut(s)	845, 932, 1261
AflIII	ACRYGT	1 cut(s)	2053
AhlI	ACTAGT	1 cut(s)	370
AjnI	CCWGG	3 cut(s)	869, 925, 1816
AjuI	GAANNNNNNNTTGG	2 cut(s)	1439, 1471
AluBI	AGCT	6 cut(s)	124, 834, 867, 915, 1756, 1829
AluI	AGCT	6 cut(s)	124, 834, 867, 915, 1756, 1829
Alw21I	GWGCWC	2 cut(s)	126, 1908
Alw26I	GTCTC	5 cut(s)	490, 609, 630, 930, 945
AlwI	GGATC	4 cut(s)	346, 1483, 1496, 1900
ApeKI	GCWGC	2 cut(s)	1411, 1753
ApoI	RAATTY	6 cut(s)	62, 648, 755, 1638, 1868, 2094
Asp700I	GAANNNNTTC	1 cut(s)	140
Asp718I	GGTACC	1 cut(s)	1623
AspLEI	GCGC	3 cut(s)	165, 973, 1863
AspS9I	GGNCC	2 cut(s)	344, 1375
AsuC2I	CCSGG	1 cut(s)	1628
AsuHPI	GGTGA	5 cut(s)	107, 411, 1292, 1439, 1550
AsuII	TTCGAA	1 cut(s)	856
AvaII	GGWCC	2 cut(s)	344, 1375
BaeGI	GKGCMC	1 cut(s)	1633
BamHI	GGATCC	1 cut(s)	1488
BanI	GGYRCC	5 cut(s)	673, 1623, 1630, 1720, 2067
BanII	GRGCYC	1 cut(s)	126
BarI	GAAGNNNNNNTAC	2 cut(s)	1458, 1490
BauI	CACGAG	2 cut(s)	90, 333
BbsI	GAAGAC	2 cut(s)	753, 915
Bbv12I	GWGCWC	2 cut(s)	126, 1908
BbvI	GCAGC	2 cut(s)	1423, 1765
BccI	CCATC	5 cut(s)	153, 315, 1219, 1241, 1340
BceAI	ACGGC	1 cut(s)	200
BcgI	CGANNNNNNTGC	2 cut(s)	671, 705
BciT130I	CCWGG	3 cut(s)	871, 927, 1818
BcnI	CCSGG	1 cut(s)	1628
BcoDI	GTCTC	5 cut(s)	490, 609, 630, 930, 945
BcuI	ACTAGT	1 cut(s)	370
BfaI	CTAG	3 cut(s)	371, 612, 885
BfmI	CTRYAG	1 cut(s)	1665
BfuAI	ACCTGC	2 cut(s)	265, 562
BglII	AGATCT	2 cut(s)	1501, 1764
BisI	GCNGC	6 cut(s)	246, 350, 1412, 1754, 1878, 2084
BlsI	GCNGC	6 cut(s)	247, 351, 1413, 1755, 1879, 2085
BmcAI	AGTACT	2 cut(s)	1439, 1661
Bme1390I	CCNGG	4 cut(s)	871, 927, 1628, 1818
Bme18I	GGWCC	2 cut(s)	344, 1375
BmgT120I	GGNCC	2 cut(s)	344, 1375
BmiI	GGNNCC	6 cut(s)	675, 1490, 1625, 1632, 1722, 2069
BmrFI	CCNGG	4 cut(s)	871, 927, 1628, 1818
BmrI	ACTGGG	1 cut(s)	1895
BmsI	GCATC	6 cut(s)	232, 397, 958, 970, 1889, 1969
BmuI	ACTGGG	1 cut(s)	1895
BpiI	GAAGAC	2 cut(s)	753, 915
BpmI	CTGGAG	1 cut(s)	853
Bpu10I	CCTNAGC	1 cut(s)	564
Bpu14I	TTCGAA	1 cut(s)	856
BpuMI	CCSGG	1 cut(s)	1628
BsaBI	GATNNNNATC	2 cut(s)	411, 1044
BsaJI	CCNNGG	2 cut(s)	347, 812
BsaWI	WCCGGW	1 cut(s)	1193
BsaXI	ACNNNNNCTCC	2 cut(s)	1188, 1218
Bsc4I	CCNNNNNNNGG	3 cut(s)	845, 932, 1261
Bse118I	RCCGGY	2 cut(s)	1014, 2064
Bse1I	ACTGG	3 cut(s)	1894, 1901, 2000
Bse8I	GATNNNNATC	2 cut(s)	411, 1044
BseBI	CCWGG	3 cut(s)	871, 927, 1818
BseDI	CCNNGG	2 cut(s)	347, 812
BseJI	GATNNNNATC	2 cut(s)	411, 1044
BseLI	CCNNNNNNNGG	3 cut(s)	845, 932, 1261
BseMII	CTCAG	3 cut(s)	417, 719, 1067
BseNI	ACTGG	3 cut(s)	1894, 1901, 2000
BseRI	GAGGAG	2 cut(s)	43, 46
BseSI	GKGCMC	1 cut(s)	1633
BseXI	GCAGC	2 cut(s)	1423, 1765
BsgI	GTGCAG	1 cut(s)	675
Bsh1236I	CGCG	2 cut(s)	349, 2004
BshNI	GGYRCC	5 cut(s)	673, 1623, 1630, 1720, 2067
BsiHKAI	GWGCWC	2 cut(s)	126, 1908
BsiSI	CCGG	5 cut(s)	608, 1015, 1194, 1627, 2065
BslFI	GGGAC	2 cut(s)	473, 1993
BslI	CCNNNNNNNGG	3 cut(s)	845, 932, 1261
BsmAI	GTCTC	5 cut(s)	490, 609, 630, 930, 945
BsmBI	CGTCTC	1 cut(s)	945
BsmFI	GGGAC	2 cut(s)	473, 1993
BsmI	GAATGC	1 cut(s)	1006
Bsp119I	TTCGAA	1 cut(s)	856
Bsp1286I	GDGCHC	3 cut(s)	126, 1633, 1908
Bsp143I	GATC	8 cut(s)	338, 682, 1045, 1488, 1501, 1764, 1892, 2047
Bsp68I	TCGCGA	1 cut(s)	2004
BspACI	CCGC	8 cut(s)	245, 347, 349, 635, 1734, 1878, 1958, 2083
BspCNI	CTCAG	3 cut(s)	418, 718, 1066
BspFNI	CGCG	2 cut(s)	349, 2004
BspHI	TCATGA	1 cut(s)	1477
BspLI	GGNNCC	6 cut(s)	675, 1490, 1625, 1632, 1722, 2069
BspMI	ACCTGC	2 cut(s)	265, 562
BspPI	GGATC	4 cut(s)	346, 1483, 1496, 1900
BspQI	GCTCTTC	1 cut(s)	1056
BspT104I	TTCGAA	1 cut(s)	856
BspT107I	GGYRCC	5 cut(s)	673, 1623, 1630, 1720, 2067
BsrFI	RCCGGY	2 cut(s)	1014, 2064
BsrI	ACTGG	3 cut(s)	1894, 1901, 2000
BssAI	RCCGGY	2 cut(s)	1014, 2064
BssECI	CCNNGG	2 cut(s)	347, 812
BssMI	GATC	8 cut(s)	338, 682, 1045, 1488, 1501, 1764, 1892, 2047
BssSI	CACGAG	2 cut(s)	90, 333
BssT1I	CCWWGG	1 cut(s)	812
Bst2BI	CACGAG	2 cut(s)	90, 333
Bst2UI	CCWGG	3 cut(s)	871, 927, 1818
Bst4CI	ACNGT	2 cut(s)	1659, 1848
Bst6I	CTCTTC	4 cut(s)	428, 462, 1056, 1928
BstBI	TTCGAA	1 cut(s)	856
BstC8I	GCNNGC	2 cut(s)	836, 2081
BstDEI	CTNAG	4 cut(s)	426, 564, 705, 1053
BstDSI	CCRYGG	1 cut(s)	347
BstFNI	CGCG	2 cut(s)	349, 2004
BstHHI	GCGC	3 cut(s)	165, 973, 1863
BstKTI	GATC	8 cut(s)	341, 685, 1048, 1491, 1504, 1767, 1895, 2050
BstMAI	GTCTC	5 cut(s)	490, 609, 630, 930, 945
BstMBI	GATC	8 cut(s)	338, 682, 1045, 1488, 1501, 1764, 1892, 2047
BstMWI	GCNNNNNNNGC	3 cut(s)	1072, 1936, 1979
BstNI	CCWGG	3 cut(s)	871, 927, 1818
BstNSI	RCATGY	2 cut(s)	1099, 2057
BstSCI	CCNGG	4 cut(s)	869, 925, 1626, 1816
BstSFI	CTRYAG	1 cut(s)	1665
BstSLI	GKGCMC	1 cut(s)	1633
BstUI	CGCG	2 cut(s)	349, 2004
BstV1I	GCAGC	2 cut(s)	1423, 1765
BstV2I	GAAGAC	2 cut(s)	753, 915
BstX2I	RGATCY	4 cut(s)	338, 1488, 1501, 1764
BstYI	RGATCY	4 cut(s)	338, 1488, 1501, 1764
BtgI	CCRYGG	1 cut(s)	347
BtgZI	GCGATG	1 cut(s)	294
BtsI	GCAGTG	2 cut(s)	121, 937
BtsIMutI	CAGTG	4 cut(s)	121, 937, 1887, 1908
BtuMI	TCGCGA	1 cut(s)	2004
BveI	ACCTGC	2 cut(s)	265, 562
Cac8I	GCNNGC	2 cut(s)	836, 2081
CciI	TCATGA	1 cut(s)	1477
CfoI	GCGC	3 cut(s)	165, 973, 1863
Cfr10I	RCCGGY	2 cut(s)	1014, 2064
Cfr13I	GGNCC	2 cut(s)	344, 1375
Cfr42I	CCGCGG	1 cut(s)	350
Csp6I	GTAC	5 cut(s)	1438, 1624, 1660, 1782, 1849
CviAII	CATG	6 cut(s)	107, 1096, 1379, 1478, 1896, 2054
CviQI	GTAC	5 cut(s)	1438, 1624, 1660, 1782, 1849
DdeI	CTNAG	4 cut(s)	426, 564, 705, 1053
DpnI	GATC	8 cut(s)	340, 684, 1047, 1490, 1503, 1766, 1894, 2049
DpnII	GATC	8 cut(s)	338, 682, 1045, 1488, 1501, 1764, 1892, 2047
DraIII	CACNNNGTG	1 cut(s)	1620
Eam1104I	CTCTTC	4 cut(s)	428, 462, 1056, 1928
EarI	CTCTTC	4 cut(s)	428, 462, 1056, 1928
Ecl136II	GAGCTC	1 cut(s)	124
Eco130I	CCWWGG	1 cut(s)	812
Eco24I	GRGCYC	1 cut(s)	126
Eco32I	GATATC	1 cut(s)	820
Eco47I	GGWCC	2 cut(s)	344, 1375
Eco53kI	GAGCTC	1 cut(s)	124
Eco57I	CTGAAG	2 cut(s)	1026, 1952
EcoICRI	GAGCTC	1 cut(s)	124
EcoRII	CCWGG	3 cut(s)	869, 925, 1816
EcoRV	GATATC	1 cut(s)	820
EcoT14I	CCWWGG	1 cut(s)	812
EcoT38I	GRGCYC	1 cut(s)	126
ErhI	CCWWGG	1 cut(s)	812
Esp3I	CGTCTC	1 cut(s)	945
FaeI	CATG	6 cut(s)	110, 1099, 1382, 1481, 1899, 2057
FalI	AAGNNNNNCTT	2 cut(s)	1925, 1957
FaqI	GGGAC	2 cut(s)	473, 1993
FatI	CATG	6 cut(s)	106, 1095, 1378, 1477, 1895, 2053
FauI	CCCGC	1 cut(s)	1727
FauNDI	CATATG	1 cut(s)	1371
Fnu4HI	GCNGC	6 cut(s)	246, 350, 1412, 1754, 1878, 2084
FriOI	GRGCYC	1 cut(s)	126
Fsp4HI	GCNGC	6 cut(s)	246, 350, 1412, 1754, 1878, 2084
FspBI	CTAG	3 cut(s)	371, 612, 885
FspI	TGCGCA	1 cut(s)	1862
GlaI	GCGC	3 cut(s)	164, 972, 1862
GluI	GCNGC	6 cut(s)	246, 350, 1412, 1754, 1878, 2084
GsuI	CTGGAG	1 cut(s)	853
HapII	CCGG	5 cut(s)	608, 1015, 1194, 1627, 2065
HhaI	GCGC	3 cut(s)	165, 973, 1863
Hin1II	CATG	6 cut(s)	110, 1099, 1382, 1481, 1899, 2057
Hin6I	GCGC	3 cut(s)	163, 971, 1861
HinP1I	GCGC	3 cut(s)	163, 971, 1861
HpaII	CCGG	5 cut(s)	608, 1015, 1194, 1627, 2065
HphI	GGTGA	5 cut(s)	107, 411, 1292, 1439, 1550
Hpy166II	GTNNAC	2 cut(s)	1586, 1784
Hpy8I	GTNNAC	2 cut(s)	1586, 1784
HpyCH4III	ACNGT	2 cut(s)	1659, 1848
HpyCH4IV	ACGT	1 cut(s)	769
HpyCH4V	TGCA	5 cut(s)	387, 692, 733, 1110, 1695
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1072, 1936, 1979
HpyF3I	CTNAG	4 cut(s)	426, 564, 705, 1053
HpySE526I	ACGT	1 cut(s)	769
Hsp92II	CATG	6 cut(s)	110, 1099, 1382, 1481, 1899, 2057
HspAI	GCGC	3 cut(s)	163, 971, 1861
KpnI	GGTACC	1 cut(s)	1627
KspI	CCGCGG	1 cut(s)	350
Kzo9I	GATC	8 cut(s)	338, 682, 1045, 1488, 1501, 1764, 1892, 2047
LguI	GCTCTTC	1 cut(s)	1056
LmnI	GCTCC	3 cut(s)	872, 1366, 1960
Lsp1109I	GCAGC	2 cut(s)	1423, 1765
LweI	GCATC	6 cut(s)	232, 397, 958, 970, 1889, 1969
MaeI	CTAG	3 cut(s)	371, 612, 885
MaeII	ACGT	1 cut(s)	769
MaeIII	GTNAC	3 cut(s)	770, 1566, 1612
MalI	GATC	8 cut(s)	340, 684, 1047, 1490, 1503, 1766, 1894, 2049
MboI	GATC	8 cut(s)	338, 682, 1045, 1488, 1501, 1764, 1892, 2047
MfeI	CAATTG	2 cut(s)	1483, 1671
MflI	RGATCY	4 cut(s)	338, 1488, 1501, 1764
MhlI	GDGCHC	3 cut(s)	126, 1633, 1908
MlyI	GAGTC	7 cut(s)	297, 492, 632, 886, 1409, 1591, 2015
MmeI	TCCRAC	1 cut(s)	568
MroXI	GAANNNNTTC	1 cut(s)	140
MseI	TTAA	7 cut(s)	213, 378, 1296, 1320, 1434, 1839, 2073
MslI	CAYNNNNRTG	4 cut(s)	135, 297, 537, 1146
MspA1I	CMGCKG	2 cut(s)	349, 1756
MspI	CCGG	5 cut(s)	608, 1015, 1194, 1627, 2065
MspR9I	CCNGG	4 cut(s)	871, 927, 1628, 1818
MunI	CAATTG	2 cut(s)	1483, 1671
Mva1269I	GAATGC	1 cut(s)	1006
MvaI	CCWGG	3 cut(s)	871, 927, 1818
MvnI	CGCG	2 cut(s)	349, 2004
MwoI	GCNNNNNNNGC	3 cut(s)	1072, 1936, 1979
NciI	CCSGG	1 cut(s)	1628
NdeI	CATATG	1 cut(s)	1371
NdeII	GATC	8 cut(s)	338, 682, 1045, 1488, 1501, 1764, 1892, 2047
NlaIII	CATG	6 cut(s)	110, 1099, 1382, 1481, 1899, 2057
NlaIV	GGNNCC	6 cut(s)	675, 1490, 1625, 1632, 1722, 2069
NmeAIII	GCCGAG	1 cut(s)	286
NmuCI	GTSAC	3 cut(s)	770, 1566, 1612
NruI	TCGCGA	1 cut(s)	2004
NsbI	TGCGCA	1 cut(s)	1862
NspI	RCATGY	2 cut(s)	1099, 2057
NspV	TTCGAA	1 cut(s)	856
PagI	TCATGA	1 cut(s)	1477
PciI	ACATGT	1 cut(s)	2053
PciSI	GCTCTTC	1 cut(s)	1056
PctI	GAATGC	1 cut(s)	1006
PdmI	GAANNNNTTC	1 cut(s)	140
PfeI	GAWTC	8 cut(s)	38, 141, 329, 806, 853, 1028, 1040, 1913
PkrI	GCNGC	6 cut(s)	247, 351, 1413, 1755, 1879, 2085
PleI	GAGTC	7 cut(s)	297, 491, 631, 885, 1408, 1590, 2014
PpsI	GAGTC	7 cut(s)	297, 491, 631, 885, 1408, 1590, 2014
PscI	ACATGT	1 cut(s)	2053
PsiI	TTATAA	2 cut(s)	45, 1950
Psp124BI	GAGCTC	1 cut(s)	126
Psp6I	CCWGG	3 cut(s)	869, 925, 1816
PspGI	CCWGG	3 cut(s)	869, 925, 1816
PspN4I	GGNNCC	6 cut(s)	675, 1490, 1625, 1632, 1722, 2069
PspPI	GGNCC	2 cut(s)	344, 1375
PsuI	RGATCY	4 cut(s)	338, 1488, 1501, 1764
PvuII	CAGCTG	1 cut(s)	1756
RruI	TCGCGA	1 cut(s)	2004
RsaI	GTAC	5 cut(s)	1439, 1625, 1661, 1783, 1850
RsaNI	GTAC	5 cut(s)	1438, 1624, 1660, 1782, 1849
RseI	CAYNNNNRTG	4 cut(s)	135, 297, 537, 1146
SacI	GAGCTC	1 cut(s)	126
SacII	CCGCGG	1 cut(s)	350
SapI	GCTCTTC	1 cut(s)	1056
SaqAI	TTAA	7 cut(s)	213, 378, 1296, 1320, 1434, 1839, 2073
SatI	GCNGC	6 cut(s)	246, 350, 1412, 1754, 1878, 2084
Sau3AI	GATC	8 cut(s)	338, 682, 1045, 1488, 1501, 1764, 1892, 2047
Sau96I	GGNCC	2 cut(s)	344, 1375
ScaI	AGTACT	2 cut(s)	1439, 1661
SchI	GAGTC	7 cut(s)	297, 492, 632, 886, 1409, 1591, 2015
ScrFI	CCNGG	4 cut(s)	871, 927, 1628, 1818
SduI	GDGCHC	3 cut(s)	126, 1633, 1908
SfaNI	GCATC	6 cut(s)	232, 397, 958, 970, 1889, 1969
SfcI	CTRYAG	1 cut(s)	1665
Sfr303I	CCGCGG	1 cut(s)	350
SfuI	TTCGAA	1 cut(s)	856
SgrBI	CCGCGG	1 cut(s)	350
SinI	GGWCC	2 cut(s)	344, 1375
SmiMI	CAYNNNNRTG	4 cut(s)	135, 297, 537, 1146
SpeI	ACTAGT	1 cut(s)	370
SsiI	CCGC	8 cut(s)	245, 347, 349, 635, 1734, 1878, 1958, 2083
SspI	AATATT	1 cut(s)	1519
SspMI	CTAG	3 cut(s)	371, 612, 885
SstI	GAGCTC	1 cut(s)	126
StyD4I	CCNGG	4 cut(s)	869, 925, 1626, 1816
StyI	CCWWGG	1 cut(s)	812
TaaI	ACNGT	2 cut(s)	1659, 1848
TaiI	ACGT	1 cut(s)	772
TaqI	TCGA	5 cut(s)	53, 491, 856, 1403, 2050
TatI	WGTACW	2 cut(s)	1437, 1659
TauI	GCSGC	4 cut(s)	248, 352, 1880, 2086
TfiI	GAWTC	8 cut(s)	38, 141, 329, 806, 853, 1028, 1040, 1913
Tru1I	TTAA	7 cut(s)	213, 378, 1296, 1320, 1434, 1839, 2073
Tru9I	TTAA	7 cut(s)	213, 378, 1296, 1320, 1434, 1839, 2073
TscAI	CASTG	4 cut(s)	121, 937, 1894, 1908
TseFI	GTSAC	3 cut(s)	770, 1566, 1612
TseI	GCWGC	2 cut(s)	1411, 1753
Tsp45I	GTSAC	3 cut(s)	770, 1566, 1612
TspDTI	ATGAA	7 cut(s)	738, 1143, 1235, 1421, 1460, 1466, 1758
TspRI	CASTG	4 cut(s)	121, 937, 1894, 1908
VpaK11BI	GGWCC	2 cut(s)	344, 1375
XapI	RAATTY	6 cut(s)	62, 648, 755, 1638, 1868, 2094
XceI	RCATGY	2 cut(s)	1099, 2057
XmnI	GAANNNNTTC	1 cut(s)	140
XspI	CTAG	3 cut(s)	371, 612, 885
ZrmI	AGTACT	2 cut(s)	1439, 1661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.