Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002301

Physical Location & Seq

Genomic Coordinates Forward (+)

58054701 .. 58056755

Gene Structure 2055 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00264390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGCGACAGGGAGAGTTGACGTTTTTAGAAGAAGGGATTCTCCTAAGTACTCCAAAAGAGAATCTGAGTATTATAGGAACGGGTTCTCTGGTGTTAAGCTGAGCCATGGCGGTGATGGGGGTGTCAAATATAGGGATGAAGTTGGCAATTCAAGGAGGTCGGTTGAGAATGGAAGGGGTCCTCATCGGGAAGGGGTCGTTGAGTTACTTCCTGAGAAGAAGAGGAAGTTTTCGCCCATTATATGGGATAAAGAAGAGAAGAAAGCGAGGGCATTAACAAGGAGTGGGGTTGTTCCTGTCTCGGCCATTGCTCATTCATCACCTAGGAAGAGATCATCTTTTGAGGTTGGTGATGTTGTCTCTGATGGTCCTGCTTCAGATATTCAGTCTCATGGAGACGGGGTGTCTGAATTCAAGCATGAAAATGTGGTTCCGTTACTCTCCGAGAAGAAGAGGAAGTCTCCTGTTACAATTGACAGAGAACAGAAGAAAGTGAGGATATCATCAAAGAACAGAGTTGTTAAAGTTGTTCCAGTCATTTCTTCTACATCTCCTTGTCCTGCTCAAACCAATGGGGTTGCTTCAAAGTCTCCTGCTTCAGAGATTCAGTCTCAGGGAGTGGAGGTGTCTGAAGCTGAACCTTCTGTGGCTGATGGGCTGGTGGAGATTTCTCATTTGGAACCTCCTGCTGATGTGCATACTCCACTATGCAAATCCGAGGCACAGAGTAACCTAAATGACAAAGACCAGACTAGGATCTCATTGTCAAGATGGGCATCTGACACTGATTCTCCGATGGATGATCGCAGCTGTAACTCAACTCCAGAAAGTGGCGAAATCCAAAGAGAAGACTCAGTTGAGCCTAGGAGCAGAACTTCTAGCTCTCATGAAGAAAGCGACTCTGTCTCTGGAGAAGAGATTGGTGGAGTTGGTGGGAATGCAACTGGTGGCCAGCTGTATCCTGACTCAGAGGATGATGAAGGTCTTCCTCAGATTGAAGAGCCTGTGGTGCCAAGAGGAAGAAGTACAAACATGCTTCAGGGATGCAGAAGTGTGGCCGAGTTTACTAAACTAGATGGGATGCTGGGTGAAGGCACTTATGGTGTTGTCTACAGAGCGAGAGATAAACAAACTGGAGAAATTGTAGCCATTAAGAAGGTGAAGATGGATAAGTTCAATGAAGGTTTCCCTATTACATCATTGAGAGAAATAAACATTCTTTTGTCTTGTAATCACCCTTCCATTGTGGGTGTGAAGGAAGTTGTTCACAACGGTGATGATATTTTTATGGTTATGGAGTGTATGGAATATGAGCTCAAGCTTCTAACGGAGGCGACGAAACAGCCATTTAGTATAGGCGAAGTTAAATACTTGATGAGAAGTCTGTTGGAGGGTGTGAAGTATCTTCATGACAATTGGGTTCTTCACAGAGATCTGAAAACTTCAAATATTCTTTTAAACAAGGAGGGTGAATTGAAAATATGCGACTTTGGTTTGTCACGCCAGTATGGGAGTACCCTGAAGCCATATACTTCCCTAGTCGTCACTTTGTGGTACAGGGCACCTGAACTGCTATTAGGTCAAAAGCAGTATTCTACAGCAATTGATATGTGGTCAGTTGGATGTATAATGGCTGAACTTTTGGCCAAGGAAGCTCTATTTCAAGGGAAAACCGAAGTTGATCAGCTTGACAAGATTTTCAGAACTCTTGGTACCCCAAGTGAGACAGATTGGCCTGGGGTATCCAAATTGCCTGGCTTCAAAGCTATTCAGGTTAAACAACGGGAGAACCTTTTGCGCAAGAAATTTTCTGGGACATGTTTCACAGGATCCCCAATGCTCTCTGCTTCAGGGTTGGATTTGTTGACAAAACTTTTAACATACGACCCTGTGAAGCGGATAACAGTGGATGATGCTCTTAGCCATGACTGGTTTAGAGACTATCCCGAACCCAGACCTTTCAAGCCTTCGCCTACTGTGCATGACAGGTACATGAGCCTCAGGCAGCGTCAGGAAAGGGAGCATGTGGAAAGGGCGCGTCATGGAAAGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006139 GO:0006396 GO:0006397 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008380 GO:0009555 GO:0009653 GO:0009889 GO:0009987 GO:0010208 GO:0010467 GO:0010468 GO:0010556 GO:0010584 GO:0010675 GO:0010927 GO:0010962 GO:0016043 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022607 GO:0030198 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0032950 GO:0032951 GO:0032952 GO:0032953 GO:0032989 GO:0034641 GO:0036211 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045229 GO:0046483 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0085029 GO:0090304 GO:0097472 GO:0140096 GO:1901360 GO:1901564 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

684

Amino Acids

76.25

Weight (kDa)

7.25

Isoelectric Point (pI)

51.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	358 - 550	4.8e-33	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	360 - 645	1.8e-74	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370
fragaria_vesca	FvH4_5g07740
malus_domestica	MD06G1147400.v1.1 MD06G1147600.v1.1 MD14G1161600.v1.1
prunus_persica	Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1
pyrus_communis	pycom06g13700
rosa_chinensis	RchiOBHm_Chr7g0190701 RchiOBHm_Chr7g0190711
rosa_laevigata	RLG00000004502
rosa_multiflora	Rmu_co8410623.1_g000001 Rmu_sc0006709.1_g000001 Rmu_sc0014053.1_g000001 Rmu_sc0021017.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264390
rosa_rugosa	Rorug06G0506600 Rorug06G0506700
rosa_samantha	Rh7AG113100 Rh7AG113200 Rh7BG115600 Rh7BG115700 Rh7CG118100 Rh7CG118200 Rh7DG117000 Rh7DG117100
rosa_wichuraiana	Rw7G009870 Rw7G009880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1799
Acc65I	GGTACC	1 cut(s)	1712
AccB1I	GGYRCC	3 cut(s)	1009, 1561, 1712
AccB7I	CCANNNNNTGG	2 cut(s)	243, 830
AccI	GTMKAC	1 cut(s)	1110
AccII	CGCG	1 cut(s)	2038
AciI	CCGC	2 cut(s)	111, 1897
AclWI	GGATC	3 cut(s)	764, 1824, 1837
AcoI	YGGCCR	4 cut(s)	303, 949, 1056, 1644
AcsI	RAATTY	2 cut(s)	410, 1805
AcuI	CTGAAG	6 cut(s)	360, 582, 651, 1022, 1541, 1833
AdeI	CACNNNGTG	1 cut(s)	1551
AfaI	GTAC	6 cut(s)	50, 1027, 1516, 1556, 1714, 1991
AfiI	CCNNNNNNNGG	2 cut(s)	243, 830
AflIII	ACRYGT	1 cut(s)	1817
AhdI	GACNNNNNGTC	1 cut(s)	403
AjnI	CCWGG	2 cut(s)	1735, 1753
AleI	CACNNNNGTG	1 cut(s)	1272
Alw21I	GWGCWC	1 cut(s)	1317
AlwI	GGATC	3 cut(s)	764, 1824, 1837
AoxI	GGCC	5 cut(s)	303, 949, 1056, 1644, 1733
ApeKI	GCWGC	2 cut(s)	807, 2005
ApoI	RAATTY	2 cut(s)	410, 1805
Asp700I	GAANNNNTTC	4 cut(s)	37, 83, 984, 1263
Asp718I	GGTACC	1 cut(s)	1712
AspA2I	CCTAGG	2 cut(s)	323, 863
AspLEI	GCGC	2 cut(s)	1800, 2038
AspS9I	GGNCC	2 cut(s)	179, 368
AsuHPI	GGTGA	8 cut(s)	125, 312, 362, 1100, 1171, 1226, 1286, 1481
AvaII	GGWCC	2 cut(s)	179, 368
AvrII	CCTAGG	2 cut(s)	323, 863
AxyI	CCTNAGG	1 cut(s)	2000
BaeGI	GKGCMC	1 cut(s)	1564
BalI	TGGCCA	2 cut(s)	951, 1646
BamHI	GGATCC	1 cut(s)	1829
BanI	GGYRCC	3 cut(s)	1009, 1561, 1712
BanII	GRGCYC	1 cut(s)	1317
BarI	GAAGNNNNNNTAC	2 cut(s)	1222, 1254
BbsI	GAAGAC	2 cut(s)	855, 977
Bbv12I	GWGCWC	1 cut(s)	1317
BbvI	GCAGC	2 cut(s)	819, 2017
BccI	CCATC	7 cut(s)	110, 359, 647, 765, 790, 1070, 1159
BciT130I	CCWGG	2 cut(s)	1737, 1755
BciVI	GTATCC	2 cut(s)	969, 1753
BclI	TGATCA	1 cut(s)	1681
BfaI	CTAG	6 cut(s)	324, 753, 864, 879, 1073, 1538
BfmI	CTRYAG	2 cut(s)	1111, 1596
BfuI	GTATCC	2 cut(s)	969, 1753
BglII	AGATCT	1 cut(s)	1432
BisI	GCNGC	2 cut(s)	808, 2006
BlnI	CCTAGG	2 cut(s)	323, 863
BlpI	GCTNAGC	1 cut(s)	101
BlsI	GCNGC	2 cut(s)	809, 2007
BmcAI	AGTACT	1 cut(s)	50
Bme1390I	CCNGG	2 cut(s)	1737, 1755
Bme18I	GGWCC	2 cut(s)	179, 368
BmeRI	GACNNNNNGTC	1 cut(s)	403
BmgT120I	GGNCC	2 cut(s)	179, 368
BmiI	GGNNCC	7 cut(s)	180, 432, 681, 1011, 1563, 1714, 1831
BmrFI	CCNGG	2 cut(s)	1737, 1755
BmsI	GCATC	4 cut(s)	785, 1034, 1071, 1903
BpiI	GAAGAC	2 cut(s)	855, 977
BplI	GAGNNNNNCTC	2 cut(s)	445, 477
BpmI	CTGGAG	3 cut(s)	807, 930, 1155
Bpu1102I	GCTNAGC	1 cut(s)	101
BpuEI	CTTGAG	1 cut(s)	1301
BsaBI	GATNNNNATC	1 cut(s)	775
BsaJI	CCNNGG	6 cut(s)	106, 323, 717, 863, 1647, 1736
BsaXI	ACNNNNNCTCC	8 cut(s)	387, 417, 609, 639, 775, 805, 1128, 1158
Bsc4I	CCNNNNNNNGG	2 cut(s)	243, 830
Bse1I	ACTGG	5 cut(s)	533, 949, 1138, 1504, 1934
Bse21I	CCTNAGG	1 cut(s)	2000
Bse3DI	GCAATG	1 cut(s)	306
Bse8I	GATNNNNATC	1 cut(s)	775
BseBI	CCWGG	2 cut(s)	1737, 1755
BseDI	CCNNGG	6 cut(s)	106, 323, 717, 863, 1647, 1736
BseGI	GGATG	7 cut(s)	142, 805, 979, 1049, 1086, 1628, 1915
BseJI	GATNNNNATC	1 cut(s)	775
BseLI	CCNNNNNNNGG	2 cut(s)	243, 830
BseMI	GCAATG	1 cut(s)	306
BseMII	CTCAG	8 cut(s)	57, 92, 204, 626, 867, 981, 1004, 2014
BseNI	ACTGG	5 cut(s)	533, 949, 1138, 1504, 1934
BseSI	GKGCMC	1 cut(s)	1564
BseXI	GCAGC	2 cut(s)	819, 2017
BseYI	CCCAGC	1 cut(s)	1084
Bsh1236I	CGCG	1 cut(s)	2038
BshFI	GGCC	5 cut(s)	305, 951, 1058, 1646, 1735
BshNI	GGYRCC	3 cut(s)	1009, 1561, 1712
BsiHKAI	GWGCWC	1 cut(s)	1317
BslFI	GGGAC	1 cut(s)	1828
BslI	CCNNNNNNNGG	2 cut(s)	243, 830
BsmBI	CGTCTC	1 cut(s)	390
BsmFI	GGGAC	1 cut(s)	1828
BsmI	GAATGC	1 cut(s)	943
BsnI	GGCC	5 cut(s)	305, 951, 1058, 1646, 1735
Bsp1286I	GDGCHC	2 cut(s)	1317, 1564
Bsp143I	GATC	6 cut(s)	332, 756, 802, 1432, 1681, 1829
Bsp1720I	GCTNAGC	1 cut(s)	101
Bsp19I	CCATGG	1 cut(s)	106
BspACI	CCGC	2 cut(s)	111, 1897
BspANI	GGCC	5 cut(s)	305, 951, 1058, 1646, 1735
BspCNI	CTCAG	8 cut(s)	58, 93, 205, 625, 866, 980, 1003, 2013
BspFNI	CGCG	1 cut(s)	2038
BspHI	TCATGA	2 cut(s)	886, 1408
BspLI	GGNNCC	7 cut(s)	180, 432, 681, 1011, 1563, 1714, 1831
BspPI	GGATC	3 cut(s)	764, 1824, 1837
BspQI	GCTCTTC	1 cut(s)	993
BspT107I	GGYRCC	3 cut(s)	1009, 1561, 1712
BsrDI	GCAATG	1 cut(s)	306
BsrI	ACTGG	5 cut(s)	533, 949, 1138, 1504, 1934
BssECI	CCNNGG	6 cut(s)	106, 323, 717, 863, 1647, 1736
BssMI	GATC	6 cut(s)	332, 756, 802, 1432, 1681, 1829
BssT1I	CCWWGG	4 cut(s)	106, 323, 863, 1647
Bst2UI	CCWGG	2 cut(s)	1737, 1755
Bst4CI	ACNGT	3 cut(s)	1274, 1906, 1978
Bst6I	CTCTTC	6 cut(s)	215, 249, 323, 446, 909, 993
BstC8I	GCNNGC	1 cut(s)	953
BstDSI	CCRYGG	1 cut(s)	106
BstF5I	GGATG	7 cut(s)	142, 805, 979, 1049, 1086, 1628, 1915
BstFNI	CGCG	1 cut(s)	2038
BstHHI	GCGC	2 cut(s)	1800, 2038
BstKTI	GATC	6 cut(s)	335, 759, 805, 1435, 1684, 1832
BstMBI	GATC	6 cut(s)	332, 756, 802, 1432, 1681, 1829
BstMWI	GCNNNNNNNGC	3 cut(s)	1009, 1652, 1978
BstNI	CCWGG	2 cut(s)	1737, 1755
BstNSI	RCATGY	3 cut(s)	1036, 1821, 2027
BstSCI	CCNGG	2 cut(s)	1735, 1753
BstSFI	CTRYAG	2 cut(s)	1111, 1596
BstSLI	GKGCMC	1 cut(s)	1564
BstUI	CGCG	1 cut(s)	2038
BstV1I	GCAGC	2 cut(s)	819, 2017
BstV2I	GAAGAC	2 cut(s)	855, 977
BstX2I	RGATCY	3 cut(s)	756, 1432, 1829
BstYI	RGATCY	3 cut(s)	756, 1432, 1829
Bsu36I	CCTNAGG	1 cut(s)	2000
BsuI	GTATCC	2 cut(s)	969, 1753
BsuRI	GGCC	5 cut(s)	305, 951, 1058, 1646, 1735
BtgI	CCRYGG	1 cut(s)	106
BtsCI	GGATG	7 cut(s)	142, 805, 979, 1049, 1086, 1628, 1915
BtsIMutI	CAGTG	2 cut(s)	783, 1911
Cac8I	GCNNGC	1 cut(s)	953
CciI	TCATGA	2 cut(s)	886, 1408
CfoI	GCGC	2 cut(s)	1800, 2038
Cfr13I	GGNCC	2 cut(s)	179, 368
CseI	GACGC	2 cut(s)	1997, 2027
Csp6I	GTAC	6 cut(s)	49, 1026, 1515, 1555, 1713, 1990
CviQI	GTAC	6 cut(s)	49, 1026, 1515, 1555, 1713, 1990
DpnI	GATC	6 cut(s)	334, 758, 804, 1434, 1683, 1831
DpnII	GATC	6 cut(s)	332, 756, 802, 1432, 1681, 1829
DraI	TTTAAA	1 cut(s)	1458
DraIII	CACNNNGTG	1 cut(s)	1551
DriI	GACNNNNNGTC	1 cut(s)	403
EaeI	YGGCCR	4 cut(s)	303, 949, 1056, 1644
Eam1104I	CTCTTC	6 cut(s)	215, 249, 323, 446, 909, 993
Eam1105I	GACNNNNNGTC	1 cut(s)	403
EarI	CTCTTC	6 cut(s)	215, 249, 323, 446, 909, 993
Ecl136II	GAGCTC	1 cut(s)	1315
Eco130I	CCWWGG	4 cut(s)	106, 323, 863, 1647
Eco24I	GRGCYC	1 cut(s)	1317
Eco32I	GATATC	1 cut(s)	501
Eco47I	GGWCC	2 cut(s)	179, 368
Eco53kI	GAGCTC	1 cut(s)	1315
Eco57I	CTGAAG	6 cut(s)	360, 582, 651, 1022, 1541, 1833
Eco81I	CCTNAGG	1 cut(s)	2000
EcoICRI	GAGCTC	1 cut(s)	1315
EcoO109I	RGGNCCY	1 cut(s)	179
EcoRI	GAATTC	1 cut(s)	410
EcoRII	CCWGG	2 cut(s)	1735, 1753
EcoRV	GATATC	1 cut(s)	501
EcoT14I	CCWWGG	4 cut(s)	106, 323, 863, 1647
EcoT38I	GRGCYC	1 cut(s)	1317
ErhI	CCWWGG	4 cut(s)	106, 323, 863, 1647
Esp3I	CGTCTC	1 cut(s)	390
FaqI	GGGAC	1 cut(s)	1828
FbaI	TGATCA	1 cut(s)	1681
FblI	GTMKAC	1 cut(s)	1110
Fnu4HI	GCNGC	2 cut(s)	808, 2006
FokI	GGATG	7 cut(s)	149, 812, 986, 1056, 1093, 1635, 1922
FriOI	GRGCYC	1 cut(s)	1317
Fsp4HI	GCNGC	2 cut(s)	808, 2006
FspBI	CTAG	6 cut(s)	324, 753, 864, 879, 1073, 1538
FspI	TGCGCA	1 cut(s)	1799
GlaI	GCGC	2 cut(s)	1799, 2037
GluI	GCNGC	2 cut(s)	808, 2006
GsaI	CCCAGC	1 cut(s)	1088
GsuI	CTGGAG	3 cut(s)	807, 930, 1155
HaeIII	GGCC	5 cut(s)	305, 951, 1058, 1646, 1735
HgaI	GACGC	2 cut(s)	1997, 2027
HhaI	GCGC	2 cut(s)	1800, 2038
Hin6I	GCGC	2 cut(s)	1798, 2036
HinP1I	GCGC	2 cut(s)	1798, 2036
HincII	GTYRAC	2 cut(s)	19, 1866
HindII	GTYRAC	2 cut(s)	19, 1866
HindIII	AAGCTT	1 cut(s)	1319
HinfI	GANTC	7 cut(s)	38, 62, 604, 788, 851, 899, 965
HphI	GGTGA	8 cut(s)	125, 312, 362, 1100, 1171, 1226, 1286, 1481
Hpy166II	GTNNAC	5 cut(s)	19, 1065, 1111, 1267, 1866
Hpy8I	GTNNAC	5 cut(s)	19, 1065, 1111, 1267, 1866
Hpy99I	CGWCG	1 cut(s)	1339
HpyCH4III	ACNGT	3 cut(s)	1274, 1906, 1978
HpyCH4IV	ACGT	1 cut(s)	21
HpyCH4V	TGCA	5 cut(s)	697, 711, 941, 1047, 1981
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1009, 1652, 1978
HpySE526I	ACGT	1 cut(s)	21
HspAI	GCGC	2 cut(s)	1798, 2036
KpnI	GGTACC	1 cut(s)	1716
Ksp22I	TGATCA	1 cut(s)	1681
Kzo9I	GATC	6 cut(s)	332, 756, 802, 1432, 1681, 1829
LguI	GCTCTTC	1 cut(s)	993
LmnI	GCTCC	2 cut(s)	867, 2020
Lsp1109I	GCAGC	2 cut(s)	819, 2017
LweI	GCATC	4 cut(s)	785, 1034, 1071, 1903
MaeI	CTAG	6 cut(s)	324, 753, 864, 879, 1073, 1538
MaeII	ACGT	1 cut(s)	21
MaeIII	GTNAC	7 cut(s)	204, 435, 466, 728, 812, 1497, 1543
MalI	GATC	6 cut(s)	334, 758, 804, 1434, 1683, 1831
MboI	GATC	6 cut(s)	332, 756, 802, 1432, 1681, 1829
MfeI	CAATTG	3 cut(s)	471, 1414, 1602
MflI	RGATCY	3 cut(s)	756, 1432, 1829
MhlI	GDGCHC	2 cut(s)	1317, 1564
MlsI	TGGCCA	2 cut(s)	951, 1646
MluCI	AATT	9 cut(s)	148, 410, 471, 1140, 1414, 1472, 1602, 1748, 1805
MluNI	TGGCCA	2 cut(s)	951, 1646
MlyI	GAGTC	3 cut(s)	845, 893, 959
MmeI	TCCRAC	3 cut(s)	1368, 1600, 1836
Mox20I	TGGCCA	2 cut(s)	951, 1646
MroXI	GAANNNNTTC	4 cut(s)	37, 83, 984, 1263
MscI	TGGCCA	2 cut(s)	951, 1646
MseI	TTAA	9 cut(s)	96, 275, 522, 1152, 1365, 1457, 1776, 1877, 2053
MslI	CAYNNNNRTG	3 cut(s)	111, 423, 1272
Msp20I	TGGCCA	2 cut(s)	951, 1646
MspA1I	CMGCKG	2 cut(s)	810, 955
MspR9I	CCNGG	2 cut(s)	1737, 1755
MunI	CAATTG	3 cut(s)	471, 1414, 1602
Mva1269I	GAATGC	1 cut(s)	943
MvaI	CCWGG	2 cut(s)	1737, 1755
MvnI	CGCG	1 cut(s)	2038
MwoI	GCNNNNNNNGC	3 cut(s)	1009, 1652, 1978
NcoI	CCATGG	1 cut(s)	106
NdeII	GATC	6 cut(s)	332, 756, 802, 1432, 1681, 1829
NlaIV	GGNNCC	7 cut(s)	180, 432, 681, 1011, 1563, 1714, 1831
NmeAIII	GCCGAG	2 cut(s)	281, 1084
NmuCI	GTSAC	2 cut(s)	1497, 1543
NsbI	TGCGCA	1 cut(s)	1799
NspI	RCATGY	3 cut(s)	1036, 1821, 2027
OliI	CACNNNNGTG	1 cut(s)	1272
PagI	TCATGA	2 cut(s)	886, 1408
PciI	ACATGT	1 cut(s)	1817
PciSI	GCTCTTC	1 cut(s)	993
PcsI	WCGNNNNNNNCGW	1 cut(s)	1334
PctI	GAATGC	1 cut(s)	943
PdmI	GAANNNNTTC	4 cut(s)	37, 83, 984, 1263
PfeI	GAWTC	4 cut(s)	38, 62, 604, 788
PflFI	GACNNNGTC	1 cut(s)	902
PflMI	CCANNNNNTGG	2 cut(s)	243, 830
PkrI	GCNGC	2 cut(s)	809, 2007
PleI	GAGTC	3 cut(s)	845, 893, 959
PpsI	GAGTC	3 cut(s)	845, 893, 959
PpuMI	RGGWCCY	1 cut(s)	179
PscI	ACATGT	1 cut(s)	1817
Psp124BI	GAGCTC	1 cut(s)	1317
Psp5II	RGGWCCY	1 cut(s)	179
Psp6I	CCWGG	2 cut(s)	1735, 1753
PspFI	CCCAGC	1 cut(s)	1084
PspGI	CCWGG	2 cut(s)	1735, 1753
PspN4I	GGNNCC	7 cut(s)	180, 432, 681, 1011, 1563, 1714, 1831
PspPI	GGNCC	2 cut(s)	179, 368
PspPPI	RGGWCCY	1 cut(s)	179
PsrI	GAACNNNNNNTAC	2 cut(s)	1696, 1728
PsuI	RGATCY	3 cut(s)	756, 1432, 1829
PsyI	GACNNNGTC	1 cut(s)	902
PvuII	CAGCTG	2 cut(s)	810, 955
RsaI	GTAC	6 cut(s)	50, 1027, 1516, 1556, 1714, 1991
RsaNI	GTAC	6 cut(s)	49, 1026, 1515, 1555, 1713, 1990
RseI	CAYNNNNRTG	3 cut(s)	111, 423, 1272
SacI	GAGCTC	1 cut(s)	1317
SapI	GCTCTTC	1 cut(s)	993
SaqAI	TTAA	9 cut(s)	96, 275, 522, 1152, 1365, 1457, 1776, 1877, 2053
SatI	GCNGC	2 cut(s)	808, 2006
Sau3AI	GATC	6 cut(s)	332, 756, 802, 1432, 1681, 1829
Sau96I	GGNCC	2 cut(s)	179, 368
ScaI	AGTACT	1 cut(s)	50
SchI	GAGTC	3 cut(s)	845, 893, 959
ScrFI	CCNGG	2 cut(s)	1737, 1755
SduI	GDGCHC	2 cut(s)	1317, 1564
SfaNI	GCATC	4 cut(s)	785, 1034, 1071, 1903
SfcI	CTRYAG	2 cut(s)	1111, 1596
SinI	GGWCC	2 cut(s)	179, 368
SmiMI	CAYNNNNRTG	3 cut(s)	111, 423, 1272
SmlI	CTYRAG	1 cut(s)	1316
SmoI	CTYRAG	1 cut(s)	1316
Sse9I	AATT	9 cut(s)	148, 410, 471, 1140, 1414, 1472, 1602, 1748, 1805
SsiI	CCGC	2 cut(s)	111, 1897
SspI	AATATT	1 cut(s)	1450
SspMI	CTAG	6 cut(s)	324, 753, 864, 879, 1073, 1538
SstI	GAGCTC	1 cut(s)	1317
StyD4I	CCNGG	2 cut(s)	1735, 1753
StyI	CCWWGG	4 cut(s)	106, 323, 863, 1647
TaaI	ACNGT	3 cut(s)	1274, 1906, 1978
TaiI	ACGT	1 cut(s)	24
TasI	AATT	9 cut(s)	148, 410, 471, 1140, 1414, 1472, 1602, 1748, 1805
TatI	WGTACW	2 cut(s)	48, 1025
TfiI	GAWTC	4 cut(s)	38, 62, 604, 788
Tru1I	TTAA	9 cut(s)	96, 275, 522, 1152, 1365, 1457, 1776, 1877, 2053
Tru9I	TTAA	9 cut(s)	96, 275, 522, 1152, 1365, 1457, 1776, 1877, 2053
TscAI	CASTG	2 cut(s)	790, 1911
TseFI	GTSAC	2 cut(s)	1497, 1543
TseI	GCWGC	2 cut(s)	807, 2005
Tsp45I	GTSAC	2 cut(s)	1497, 1543
TspDTI	ATGAA	7 cut(s)	153, 306, 435, 903, 993, 1194, 1397
TspGWI	ACGGA	2 cut(s)	423, 1343
TspRI	CASTG	2 cut(s)	790, 1911
Tth111I	GACNNNGTC	1 cut(s)	902
Van91I	CCANNNNNTGG	2 cut(s)	243, 830
VpaK11BI	GGWCC	2 cut(s)	179, 368
XapI	RAATTY	2 cut(s)	410, 1805
XceI	RCATGY	3 cut(s)	1036, 1821, 2027
XcmI	CCANNNNNNNNNTGG	1 cut(s)	113
XmaJI	CCTAGG	2 cut(s)	323, 863
XmiI	GTMKAC	1 cut(s)	1110
XmnI	GAANNNNTTC	4 cut(s)	37, 83, 984, 1263
XspI	CTAG	6 cut(s)	324, 753, 864, 879, 1073, 1538
ZrmI	AGTACT	1 cut(s)	50

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.