Rmu_sc0021017.1_g000001

cyclin-dependent kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021017.1
Physical Location & Seq
Reverse (-)
1040 .. 2537
1498 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021017.1_g000001.1.cds

Sequence Viewer

Length: 1498 bp
tcctgctcaaaccaatggggttgcttcaaagtctcctgcttcagagattcagtctcagggagtggaggtgtctgaagctgaaccttctgtggctgatgggctggtggagatttctcatttggaacctcccgccgatctgcatactccactatgcaaatccgaggcacagagtaacctgaatgacaaagaccagactaggatctctttgtcaagatgggcatctgacactgattctccgatggatgatcgcagctgtaactcaactccagaaagtggtgaaatccgaagagaagactcagttgagcctaggagcagaacttgtagctctcatgaagaaagcgactctgtcactggagaagagattgatggagttggtgggaatgcaagtggtggccagctgtatcctgactcagaggatgatgaaggtcttcctcagattgaagagcctatggtgccaagaggaagaagtacaaacatgcttcagggatgcagaagtgtggccgagtttactaaactagatgggatgctgggtgaaggcacttatggtgttgtctacagagcgagagataaacaaactggagaaattgtagccattaagaaggtgaagatggataagtccaatgaaggtttccctattacatcattgagagaaataaacattcttttgtcttgtaatcacccttccattgtgggtgtgaaggaagttgttcacaacggtgatgatatttttatggttatggagtgtatggaatatgagctcaagcttctaacggaggcgacaaaacagccatttagtataggcgaagttaaatacttgatgagaagtctgttggagggtgtgaagtatcttcatgataattgggttcttcacagagatctgaaaacttccaatattcttttaaacaaggagggtgaattgaaaatatgcgactttggtttgtcacgccagtatgggagtcccctgaagccatatacttccctagtggtcactttgtggtacagggcacctgaacttctattaggtcaaaagcagtattcgacagcaattgatatgtggtcagttggatgtataatggctgaacttttggccaaggaagcactatttcaagggaaaaccgaagttgatcagcttgacaagattttcagaacccttggtacaccaagtgagacagattggcctggggtatccaaattgccaggcttcaaagctattcaggttaaacaacgggagaaccttttgcgcaagaaattttctgggacgtgtttcacaggatccccaatgctctctgcttcagggttggatttgttgacaaaacttttaacatacgaccctgcaaagcggataacagtgggtgatgctcttagccatgactggtttaaagactatcccgaacccagacctttcaagccttcgcctactgtgcatgacaggtacatgaccctcaggcagcgtcaggaaagggagcatgtggaaagggcgcgtcgtggaaagcgttaa

Protein Analysis

498

Amino Acids

55.58

Weight (kDa)

5.44

Isoelectric Point (pI)

48.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1242
AccB1I GGYRCC 2 cut(s) 452, 1004
AccB7I CCANNNNNTGG 1 cut(s) 273
AccI GTMKAC 1 cut(s) 553
AccII CGCG 1 cut(s) 1481
AciI CCGC 2 cut(s) 130, 1340
AclWI GGATC 3 cut(s) 207, 1267, 1280
AcoI YGGCCR 3 cut(s) 392, 499, 1087
AcsI RAATTY 1 cut(s) 1248
AcuI CTGAAG 5 cut(s) 25, 94, 465, 984, 1276
AdeI CACNNNGTG 2 cut(s) 994, 1164
AfaI GTAC 4 cut(s) 470, 999, 1157, 1434
AfiI CCNNNNNNNGG 1 cut(s) 273
AflIII ACRYGT 1 cut(s) 1260
AgsI TTSAA 6 cut(s) 28, 441, 920, 1107, 1205, 1406
AjiI CACGTC 1 cut(s) 1261
AjnI CCWGG 2 cut(s) 1178, 1196
AjuI GAANNNNNNNTTGG 2 cut(s) 612, 644
AleI CACNNNNGTG 1 cut(s) 715
AluBI AGCT 8 cut(s) 78, 253, 325, 398, 758, 764, 1130, 1209
AluI AGCT 8 cut(s) 78, 253, 325, 398, 758, 764, 1130, 1209
Alw21I GWGCWC 1 cut(s) 760
Alw26I GTCTC 3 cut(s) 37, 58, 1161
AlwI GGATC 3 cut(s) 207, 1267, 1280
AoxI GGCC 4 cut(s) 392, 499, 1087, 1176
ApeKI GCWGC 2 cut(s) 250, 1448
ApoI RAATTY 1 cut(s) 1248
Asp700I GAANNNNTTC 2 cut(s) 427, 706
AspA2I CCTAGG 1 cut(s) 306
AspLEI GCGC 2 cut(s) 1243, 1481
AsuHPI GGTGA 7 cut(s) 288, 543, 614, 669, 729, 924, 1365
AvrII CCTAGG 1 cut(s) 306
AxyI CCTNAGG 1 cut(s) 1443
BaeGI GKGCMC 1 cut(s) 1007
BalI TGGCCA 2 cut(s) 394, 1089
BamHI GGATCC 1 cut(s) 1272
BanI GGYRCC 2 cut(s) 452, 1004
BanII GRGCYC 1 cut(s) 760
BarI GAAGNNNNNNTAC 2 cut(s) 665, 697
BbsI GAAGAC 2 cut(s) 298, 420
Bbv12I GWGCWC 1 cut(s) 760
BbvI GCAGC 2 cut(s) 262, 1460
BccI CCATC 6 cut(s) 90, 208, 233, 360, 513, 602
BciT130I CCWGG 2 cut(s) 1180, 1198
BciVI GTATCC 2 cut(s) 412, 1196
BclI TGATCA 1 cut(s) 1124
BcoDI GTCTC 3 cut(s) 37, 58, 1161
BfaI CTAG 4 cut(s) 196, 307, 516, 981
BfmI CTRYAG 1 cut(s) 554
BfuI GTATCC 2 cut(s) 412, 1196
BglII AGATCT 1 cut(s) 875
BisI GCNGC 2 cut(s) 251, 1449
BlnI CCTAGG 1 cut(s) 306
BlsI GCNGC 2 cut(s) 252, 1450
Bme1390I CCNGG 2 cut(s) 1180, 1198
BmgBI CACGTC 1 cut(s) 1261
BmiI GGNNCC 4 cut(s) 124, 454, 1006, 1274
BmrFI CCNGG 2 cut(s) 1180, 1198
BmsI GCATC 4 cut(s) 228, 477, 514, 1346
BpiI GAAGAC 2 cut(s) 298, 420
BpmI CTGGAG 3 cut(s) 250, 373, 598
BpuEI CTTGAG 1 cut(s) 744
BsaBI GATNNNNATC 1 cut(s) 218
BsaJI CCNNGG 5 cut(s) 160, 306, 1090, 1151, 1179
BsaXI ACNNNNNCTCC 6 cut(s) 52, 82, 218, 248, 571, 601
Bsc4I CCNNNNNNNGG 1 cut(s) 273
Bse1I ACTGG 4 cut(s) 356, 581, 947, 1377
Bse21I CCTNAGG 1 cut(s) 1443
Bse8I GATNNNNATC 1 cut(s) 218
BseBI CCWGG 2 cut(s) 1180, 1198
BseDI CCNNGG 5 cut(s) 160, 306, 1090, 1151, 1179
BseGI GGATG 5 cut(s) 248, 422, 492, 529, 1071
BseJI GATNNNNATC 1 cut(s) 218
BseLI CCNNNNNNNGG 1 cut(s) 273
BseMII CTCAG 5 cut(s) 69, 310, 424, 447, 1457
BseNI ACTGG 4 cut(s) 356, 581, 947, 1377
BseSI GKGCMC 1 cut(s) 1007
BseXI GCAGC 2 cut(s) 262, 1460
BseYI CCCAGC 1 cut(s) 527
Bsh1236I CGCG 1 cut(s) 1481
BshFI GGCC 4 cut(s) 394, 501, 1089, 1178
BshNI GGYRCC 2 cut(s) 452, 1004
BsiHKAI GWGCWC 1 cut(s) 760
BslFI GGGAC 2 cut(s) 943, 1271
BslI CCNNNNNNNGG 1 cut(s) 273
BsmAI GTCTC 3 cut(s) 37, 58, 1161
BsmFI GGGAC 2 cut(s) 943, 1271
BsmI GAATGC 1 cut(s) 386
BsnI GGCC 4 cut(s) 394, 501, 1089, 1178
Bsp1286I GDGCHC 2 cut(s) 760, 1007
Bsp143I GATC 6 cut(s) 134, 199, 245, 875, 1124, 1272
BspACI CCGC 2 cut(s) 130, 1340
BspANI GGCC 4 cut(s) 394, 501, 1089, 1178
BspCNI CTCAG 5 cut(s) 68, 309, 423, 446, 1456
BspFNI CGCG 1 cut(s) 1481
BspHI TCATGA 2 cut(s) 329, 851
BspLI GGNNCC 4 cut(s) 124, 454, 1006, 1274
BspPI GGATC 3 cut(s) 207, 1267, 1280
BspQI GCTCTTC 1 cut(s) 436
BspT107I GGYRCC 2 cut(s) 452, 1004
BsrI ACTGG 4 cut(s) 356, 581, 947, 1377
BssECI CCNNGG 5 cut(s) 160, 306, 1090, 1151, 1179
BssMI GATC 6 cut(s) 134, 199, 245, 875, 1124, 1272
BssT1I CCWWGG 3 cut(s) 306, 1090, 1151
Bst2UI CCWGG 2 cut(s) 1180, 1198
Bst4CI ACNGT 3 cut(s) 717, 1349, 1421
Bst6I CTCTTC 3 cut(s) 281, 352, 436
BstC8I GCNNGC 1 cut(s) 396
BstDEI CTNAG 6 cut(s) 55, 296, 410, 433, 1362, 1443
BstF5I GGATG 5 cut(s) 248, 422, 492, 529, 1071
BstFNI CGCG 1 cut(s) 1481
BstHHI GCGC 2 cut(s) 1243, 1481
BstKTI GATC 6 cut(s) 137, 202, 248, 878, 1127, 1275
BstMAI GTCTC 3 cut(s) 37, 58, 1161
BstMBI GATC 6 cut(s) 134, 199, 245, 875, 1124, 1272
BstMWI GCNNNNNNNGC 3 cut(s) 452, 1095, 1421
BstNI CCWGG 2 cut(s) 1180, 1198
BstNSI RCATGY 2 cut(s) 479, 1470
BstSCI CCNGG 2 cut(s) 1178, 1196
BstSFI CTRYAG 1 cut(s) 554
BstSLI GKGCMC 1 cut(s) 1007
BstUI CGCG 1 cut(s) 1481
BstV1I GCAGC 2 cut(s) 262, 1460
BstV2I GAAGAC 2 cut(s) 298, 420
BstX2I RGATCY 3 cut(s) 199, 875, 1272
BstYI RGATCY 3 cut(s) 199, 875, 1272
Bsu36I CCTNAGG 1 cut(s) 1443
BsuI GTATCC 2 cut(s) 412, 1196
BsuRI GGCC 4 cut(s) 394, 501, 1089, 1178
BtrI CACGTC 1 cut(s) 1261
BtsCI GGATG 5 cut(s) 248, 422, 492, 529, 1071
BtsIMutI CAGTG 3 cut(s) 226, 349, 1354
Cac8I GCNNGC 1 cut(s) 396
CciI TCATGA 2 cut(s) 329, 851
CfoI GCGC 2 cut(s) 1243, 1481
CseI GACGC 2 cut(s) 1440, 1470
Csp6I GTAC 4 cut(s) 469, 998, 1156, 1433
CviAII CATG 7 cut(s) 330, 476, 852, 1368, 1425, 1436, 1467
CviQI GTAC 4 cut(s) 469, 998, 1156, 1433
DdeI CTNAG 6 cut(s) 55, 296, 410, 433, 1362, 1443
DpnI GATC 6 cut(s) 136, 201, 247, 877, 1126, 1274
DpnII GATC 6 cut(s) 134, 199, 245, 875, 1124, 1272
DraI TTTAAA 2 cut(s) 901, 1379
DraIII CACNNNGTG 2 cut(s) 994, 1164
EaeI YGGCCR 3 cut(s) 392, 499, 1087
Eam1104I CTCTTC 3 cut(s) 281, 352, 436
EarI CTCTTC 3 cut(s) 281, 352, 436
Ecl136II GAGCTC 1 cut(s) 758
Eco130I CCWWGG 3 cut(s) 306, 1090, 1151
Eco24I GRGCYC 1 cut(s) 760
Eco53kI GAGCTC 1 cut(s) 758
Eco57I CTGAAG 5 cut(s) 25, 94, 465, 984, 1276
Eco81I CCTNAGG 1 cut(s) 1443
EcoICRI GAGCTC 1 cut(s) 758
EcoRII CCWGG 2 cut(s) 1178, 1196
EcoT14I CCWWGG 3 cut(s) 306, 1090, 1151
EcoT38I GRGCYC 1 cut(s) 760
ErhI CCWWGG 3 cut(s) 306, 1090, 1151
FaeI CATG 7 cut(s) 333, 479, 855, 1371, 1428, 1439, 1470
FaqI GGGAC 2 cut(s) 943, 1271
FatI CATG 7 cut(s) 329, 475, 851, 1367, 1424, 1435, 1466
FauI CCCGC 1 cut(s) 137
FbaI TGATCA 1 cut(s) 1124
FblI GTMKAC 1 cut(s) 553
Fnu4HI GCNGC 2 cut(s) 251, 1449
FokI GGATG 5 cut(s) 255, 429, 499, 536, 1078
FriOI GRGCYC 1 cut(s) 760
Fsp4HI GCNGC 2 cut(s) 251, 1449
FspBI CTAG 4 cut(s) 196, 307, 516, 981
FspI TGCGCA 1 cut(s) 1242
GlaI GCGC 2 cut(s) 1242, 1480
GluI GCNGC 2 cut(s) 251, 1449
GsaI CCCAGC 1 cut(s) 531
GsuI CTGGAG 3 cut(s) 250, 373, 598
HaeIII GGCC 4 cut(s) 394, 501, 1089, 1178
HgaI GACGC 2 cut(s) 1440, 1470
HhaI GCGC 2 cut(s) 1243, 1481
Hin1II CATG 7 cut(s) 333, 479, 855, 1371, 1428, 1439, 1470
Hin6I GCGC 2 cut(s) 1241, 1479
HinP1I GCGC 2 cut(s) 1241, 1479
HincII GTYRAC 1 cut(s) 1309
HindII GTYRAC 1 cut(s) 1309
HindIII AAGCTT 1 cut(s) 762
HinfI GANTC 6 cut(s) 47, 231, 294, 342, 408, 956
HphI GGTGA 7 cut(s) 288, 543, 614, 669, 729, 924, 1365
Hpy166II GTNNAC 5 cut(s) 508, 554, 710, 1158, 1309
Hpy188III TCNNGA 7 cut(s) 211, 267, 330, 405, 852, 1389, 1455
Hpy8I GTNNAC 5 cut(s) 508, 554, 710, 1158, 1309
Hpy99I CGWCG 1 cut(s) 1486
HpyAV CCTTC 8 cut(s) 94, 417, 528, 593, 618, 691, 692, 1420
HpyCH4III ACNGT 3 cut(s) 717, 1349, 1421
HpyCH4IV ACGT 1 cut(s) 1260
HpyCH4V TGCA 6 cut(s) 140, 154, 384, 490, 1335, 1424
HpyF10VI GCNNNNNNNGC 3 cut(s) 452, 1095, 1421
HpyF3I CTNAG 6 cut(s) 55, 296, 410, 433, 1362, 1443
HpySE526I ACGT 1 cut(s) 1260
Hsp92II CATG 7 cut(s) 333, 479, 855, 1371, 1428, 1439, 1470
HspAI GCGC 2 cut(s) 1241, 1479
Ksp22I TGATCA 1 cut(s) 1124
Kzo9I GATC 6 cut(s) 134, 199, 245, 875, 1124, 1272
LguI GCTCTTC 1 cut(s) 436
LmnI GCTCC 2 cut(s) 310, 1463
Lsp1109I GCAGC 2 cut(s) 262, 1460
LweI GCATC 4 cut(s) 228, 477, 514, 1346
MaeI CTAG 4 cut(s) 196, 307, 516, 981
MaeII ACGT 1 cut(s) 1260
MaeIII GTNAC 5 cut(s) 171, 255, 347, 940, 986
MalI GATC 6 cut(s) 136, 201, 247, 877, 1126, 1274
MboI GATC 6 cut(s) 134, 199, 245, 875, 1124, 1272
MfeI CAATTG 1 cut(s) 1045
MflI RGATCY 3 cut(s) 199, 875, 1272
MhlI GDGCHC 2 cut(s) 760, 1007
MlsI TGGCCA 2 cut(s) 394, 1089
MluCI AATT 6 cut(s) 583, 857, 915, 1045, 1191, 1248
MluNI TGGCCA 2 cut(s) 394, 1089
MlyI GAGTC 4 cut(s) 288, 336, 402, 965
MmeI TCCRAC 3 cut(s) 811, 1043, 1279
Mox20I TGGCCA 2 cut(s) 394, 1089
MroXI GAANNNNTTC 2 cut(s) 427, 706
MscI TGGCCA 2 cut(s) 394, 1089
MseI TTAA 7 cut(s) 595, 808, 900, 1219, 1320, 1378, 1496
MslI CAYNNNNRTG 1 cut(s) 715
Msp20I TGGCCA 2 cut(s) 394, 1089
MspA1I CMGCKG 2 cut(s) 253, 398
MspR9I CCNGG 2 cut(s) 1180, 1198
MunI CAATTG 1 cut(s) 1045
Mva1269I GAATGC 1 cut(s) 386
MvaI CCWGG 2 cut(s) 1180, 1198
MvnI CGCG 1 cut(s) 1481
MwoI GCNNNNNNNGC 3 cut(s) 452, 1095, 1421
NdeII GATC 6 cut(s) 134, 199, 245, 875, 1124, 1272
NlaIII CATG 7 cut(s) 333, 479, 855, 1371, 1428, 1439, 1470
NlaIV GGNNCC 4 cut(s) 124, 454, 1006, 1274
NmeAIII GCCGAG 1 cut(s) 527
NmuCI GTSAC 3 cut(s) 347, 940, 986
NsbI TGCGCA 1 cut(s) 1242
NspI RCATGY 2 cut(s) 479, 1470
OliI CACNNNNGTG 1 cut(s) 715
PagI TCATGA 2 cut(s) 329, 851
PciSI GCTCTTC 1 cut(s) 436
PcsI WCGNNNNNNNCGW 1 cut(s) 1490
PctI GAATGC 1 cut(s) 386
PdmI GAANNNNTTC 2 cut(s) 427, 706
PfeI GAWTC 2 cut(s) 47, 231
PflFI GACNNNGTC 1 cut(s) 345
PflMI CCANNNNNTGG 1 cut(s) 273
PkrI GCNGC 2 cut(s) 252, 1450
PleI GAGTC 4 cut(s) 288, 336, 402, 964
PpsI GAGTC 4 cut(s) 288, 336, 402, 964
Psp124BI GAGCTC 1 cut(s) 760
Psp6I CCWGG 2 cut(s) 1178, 1196
PspFI CCCAGC 1 cut(s) 527
PspGI CCWGG 2 cut(s) 1178, 1196
PspN4I GGNNCC 4 cut(s) 124, 454, 1006, 1274
PsrI GAACNNNNNNTAC 2 cut(s) 1139, 1171
PsuI RGATCY 3 cut(s) 199, 875, 1272
PsyI GACNNNGTC 1 cut(s) 345
PvuII CAGCTG 2 cut(s) 253, 398
RsaI GTAC 4 cut(s) 470, 999, 1157, 1434
RsaNI GTAC 4 cut(s) 469, 998, 1156, 1433
RseI CAYNNNNRTG 1 cut(s) 715
SacI GAGCTC 1 cut(s) 760
SapI GCTCTTC 1 cut(s) 436
SaqAI TTAA 7 cut(s) 595, 808, 900, 1219, 1320, 1378, 1496
SatI GCNGC 2 cut(s) 251, 1449
Sau3AI GATC 6 cut(s) 134, 199, 245, 875, 1124, 1272
SchI GAGTC 4 cut(s) 288, 336, 402, 965
ScrFI CCNGG 2 cut(s) 1180, 1198
SduI GDGCHC 2 cut(s) 760, 1007
SfaNI GCATC 4 cut(s) 228, 477, 514, 1346
SfcI CTRYAG 1 cut(s) 554
SmiMI CAYNNNNRTG 1 cut(s) 715
SmlI CTYRAG 1 cut(s) 759
SmoI CTYRAG 1 cut(s) 759
Sse9I AATT 6 cut(s) 583, 857, 915, 1045, 1191, 1248
SsiI CCGC 2 cut(s) 130, 1340
SspI AATATT 1 cut(s) 893
SspMI CTAG 4 cut(s) 196, 307, 516, 981
SstI GAGCTC 1 cut(s) 760
StyD4I CCNGG 2 cut(s) 1178, 1196
StyI CCWWGG 3 cut(s) 306, 1090, 1151
TaaI ACNGT 3 cut(s) 717, 1349, 1421
TaiI ACGT 1 cut(s) 1263
TaqI TCGA 1 cut(s) 1038
TasI AATT 6 cut(s) 583, 857, 915, 1045, 1191, 1248
TatI WGTACW 1 cut(s) 468
TfiI GAWTC 2 cut(s) 47, 231
Tru1I TTAA 7 cut(s) 595, 808, 900, 1219, 1320, 1378, 1496
Tru9I TTAA 7 cut(s) 595, 808, 900, 1219, 1320, 1378, 1496
TscAI CASTG 3 cut(s) 233, 356, 1354
TseFI GTSAC 3 cut(s) 347, 940, 986
TseI GCWGC 2 cut(s) 250, 1448
Tsp45I GTSAC 3 cut(s) 347, 940, 986
TspDTI ATGAA 4 cut(s) 346, 436, 637, 840
TspGWI ACGGA 1 cut(s) 786
TspRI CASTG 3 cut(s) 233, 356, 1354
Tth111I GACNNNGTC 1 cut(s) 345
Van91I CCANNNNNTGG 1 cut(s) 273
XapI RAATTY 1 cut(s) 1248
XceI RCATGY 2 cut(s) 479, 1470
XmaJI CCTAGG 1 cut(s) 306
XmiI GTMKAC 1 cut(s) 553
XmnI GAANNNNTTC 2 cut(s) 427, 706
XspI CTAG 4 cut(s) 196, 307, 516, 981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.