Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0002301

Physical Location & Seq

Genomic Coordinates Reverse (-)

9046792 .. 9048804

Gene Structure 2013 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG118200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGCGACAGGGCAGCTGGTTGATGTTTTGAGAAGAAGGGATTCTCCTAAATACTCCAGGAGAGAATCTGGGTATTATAAGAATGGGTTCTCTGGTGTTAAGCTGAGCCATGGCTGCAATGATGGTGGCAAATTTAGAGATGAAGTTCGCGATTCGCGAAGATGGAGAGGGCAATCAAATGCCTCAGAATCGTTGGTTGAGACCAGAAAAACTCCGGAGAAGGAGAAGGAGAAGAAGAGGAAGTTTTCTCCTGTTATATGGGACAGAGAAGAGAAGAAATTAGTAAGGGTATCATCGAAGAATGGAGTTGTTCCAGTCTCAGTTGTTTCAAGATCACCATCTTGTGAGGTTCATGATGTTGTCTCCGAAGGAGTCGACAGAGTTCAATTGCTTCCTGAGATCAGGAAGAGGAAGTCTCCGGTTACAAGTGACAGGGAAGAGAAGAGAGTGAGGATATCATCAAAGAATAGATTTGTCCCGGTCACTCCTCCATCTAGTGTAATTGTTTCCGATGGGGTTGTTTCAAATTCTCCTGCTTCACAGACTCAGTCTCATGGAGTGGAGGGTTCTGAAGATAAACCTTCTGTGGCAGATGGGCTGGTGGAGATTTCTCAAATGGAAGCCCCTGCTGATTTGCAGGTTCTGCGGCATTCCGAGGTTCCAAATAACCTGGATGACAAAGACCAGACTAGAATCTCATTGTCAAGATGGGCATCTGACATTGACTCGCCAAGGGATGATGTTAGCTGCAGCTCGACTCCTGAAAATGGCGAAATCCGAAGAGAAGGCTCAGTTGGGGATAGGAGCAGAACTTCTAGCTTTGTCAGTGGAGATGGTGGAGAAGAGATTAGTGGACATGTTGGCAATGCGGGCGTTGATCAGCTGTATCCTGATTCAGATGACAAAAATATTGCTCGGATTGAAGAGCCTGCAGTGCCCAGGGGAAGAAGTGCAAACATGCTTCAGGGTTGCAGAAGTAGTCAGGAGTACTATACTAGTGATCAAGAGGCACTGGGTGAAGGCGCTTATGGTGTAGTCTACAGAGCGAGAGATGAACAAACTGGGGAAATTGTAGCCATGAAGAAGGTGAAGATGGATAAGCGCGATGAAGGTTTCCCTATTACATCATTAAGAGAAATAAACATTCTTTTGTCATGTAATCACCCTTCCATTGTGGGTGTGAAGGAAGTTGTTGTGGACAAGGATGATGATATTCTTATGGTTATGGAGTATATGGACTATGAGATCAAGTTTCTAATGGAATCGATGGAGCAGCGATTTAGTATAGGCGAAGTTAAATACTTGGTGAAAAGGCTGTTGGAGGGTGTAAAGTATCTTCATGACAATTGGGTTCTTCACAGAGATCTGAAAACTTCAAACATGCTTTTGAACAAGGAGGGTGAATTGAAAATATGTGACCTTGGGTTGTCACGCGAGTATGGGAGTCCCCTGAAGCCTTATACTTCCAATGTAGTCACTTTGTTGTACAGGGCACCTGAACTTCTATTAGGTCAAAAGCAGTACTCTACAGCAATTGATATGTGGTCAGTTGGATGTATAATGGCTGAACTTTTGGCCAAAGAACCACTATTCAGTCCGAAAACGCCAACCGAAGTTCATCAGCTTGATGCGATTTTTGATACTCTTGGTGCACCAAACGAGACAGATTGGCCTGGAGTATCCAAATTGCCAGTGTTTAAAGCTATTAAAATTAAAAAAGGGGAGAACAATCTGCGCAAGAAATTTTGTGGGACATGTTTCACAGGATCACCAATGCTTACTGCTTCAGGGTTGGATCTATTGACAAAACTTTTAACATATGATCCTGAGAAGCGCATAACAGTGGATGATGCTCTTAGCCATGACTGGTTTAAGGACTACCCTGAACCCAGCCCCTTTAAACCTTCTCCTAGTGTTCATGACAACTACATCCTCAAGCAGCAATGGGAAAGGGAGCGTCAGAAAAGAAAGAGAGAGGAAAGTGAGAGTCGTAGAAGGGAGAAAAGGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007346 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

670

Amino Acids

75.65

Weight (kDa)

6.9

Isoelectric Point (pI)

57.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	335 - 624	4.4e-70	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	335 - 529	9.3e-32	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370
fragaria_vesca	FvH4_5g07740
malus_domestica	MD06G1147400.v1.1 MD06G1147600.v1.1 MD14G1161600.v1.1
prunus_persica	Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1
pyrus_communis	pycom06g13700
rosa_chinensis	RchiOBHm_Chr7g0190701 RchiOBHm_Chr7g0190711
rosa_laevigata	RLG00000004502
rosa_multiflora	Rmu_co8410623.1_g000001 Rmu_sc0006709.1_g000001 Rmu_sc0014053.1_g000001 Rmu_sc0021017.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264390
rosa_rugosa	Rorug06G0506600 Rorug06G0506700
rosa_samantha	Rh7AG113100 Rh7AG113200 Rh7BG115600 Rh7BG115700 Rh7CG118100 Rh7CG118200 Rh7DG117000 Rh7DG117100
rosa_wichuraiana	Rw7G009870 Rw7G009880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	78
Acc16I	TGCGCA	1 cut(s)	1736
Acc36I	ACCTGC	1 cut(s)	628
AccB1I	GGYRCC	1 cut(s)	1492
AccI	GTMKAC	2 cut(s)	375, 1038
AccII	CGCG	4 cut(s)	150, 157, 1104, 1434
AccIII	TCCGGA	1 cut(s)	214
AciI	CCGC	2 cut(s)	646, 869
AclWI	GGATC	3 cut(s)	1774, 1803, 1817
AcoI	YGGCCR	1 cut(s)	1575
AcsI	RAATTY	3 cut(s)	131, 526, 1742
AcuI	CTGAAG	4 cut(s)	591, 947, 1472, 1770
AdeI	CACNNNGTG	1 cut(s)	1016
AfaI	GTAC	3 cut(s)	989, 1487, 1523
AfiI	CCNNNNNNNGG	1 cut(s)	767
AflIII	ACRYGT	2 cut(s)	856, 1754
AgsI	TTSAA	7 cut(s)	330, 386, 525, 923, 1377, 1390, 1408
AhlI	ACTAGT	1 cut(s)	995
AjnI	CCWGG	4 cut(s)	56, 669, 938, 1672
AjuI	GAANNNNNNNTTGG	4 cut(s)	777, 809, 1301, 1333
AluBI	AGCT	8 cut(s)	16, 103, 747, 753, 819, 883, 1624, 1703
AluI	AGCT	8 cut(s)	16, 103, 747, 753, 819, 883, 1624, 1703
Alw21I	GWGCWC	1 cut(s)	1654
Alw26I	GTCTC	6 cut(s)	194, 322, 367, 420, 555, 1655
Alw44I	GTGCAC	1 cut(s)	1650
AlwI	GGATC	3 cut(s)	1774, 1803, 1817
AlwNI	CAGNNNCTG	1 cut(s)	643
Aor13HI	TCCGGA	1 cut(s)	214
AoxI	GGCC	2 cut(s)	1575, 1670
ApaLI	GTGCAC	1 cut(s)	1650
ApeKI	GCWGC	6 cut(s)	13, 114, 747, 750, 1273, 1939
ApoI	RAATTY	3 cut(s)	131, 526, 1742
Asp700I	GAANNNNTTC	2 cut(s)	40, 86
AspLEI	GCGC	4 cut(s)	1025, 1104, 1737, 1836
AsuC2I	CCSGG	1 cut(s)	479
AsuHPI	GGTGA	7 cut(s)	327, 1028, 1099, 1154, 1318, 1412, 1761
BaeGI	GKGCMC	3 cut(s)	939, 1495, 1654
BalI	TGGCCA	1 cut(s)	1577
BanI	GGYRCC	1 cut(s)	1492
BarI	GAAGNNNNNNTAC	4 cut(s)	1150, 1182, 1320, 1352
Bbv12I	GWGCWC	1 cut(s)	1654
BbvI	GCAGC	6 cut(s)	25, 101, 734, 762, 1285, 1951
BciT130I	CCWGG	4 cut(s)	58, 671, 940, 1674
BciVI	GTATCC	2 cut(s)	897, 1690
BclI	TGATCA	2 cut(s)	877, 1000
BcnI	CCSGG	1 cut(s)	479
BcoDI	GTCTC	6 cut(s)	194, 322, 367, 420, 555, 1655
BcuI	ACTAGT	1 cut(s)	995
BfaI	CTAG	5 cut(s)	495, 690, 816, 996, 1911
BfmI	CTRYAG	4 cut(s)	748, 930, 1039, 1527
BfoI	RGCGCY	1 cut(s)	1026
BfuAI	ACCTGC	1 cut(s)	628
BfuI	GTATCC	2 cut(s)	897, 1690
BglII	AGATCT	1 cut(s)	1363
BisI	GCNGC	7 cut(s)	14, 115, 647, 748, 751, 1274, 1940
BlpI	GCTNAGC	1 cut(s)	104
BlsI	GCNGC	7 cut(s)	15, 116, 648, 749, 752, 1275, 1941
BmcAI	AGTACT	2 cut(s)	989, 1523
Bme1390I	CCNGG	5 cut(s)	58, 479, 671, 940, 1674
BmiI	GGNNCC	2 cut(s)	660, 1494
BmrFI	CCNGG	5 cut(s)	58, 479, 671, 940, 1674
BmrI	ACTGGG	2 cut(s)	1022, 1071
BmsI	GCATC	3 cut(s)	722, 1618, 1840
BmuI	ACTGGG	2 cut(s)	1022, 1071
BplI	GAGNNNNNCTC	2 cut(s)	400, 432
BpmI	CTGGAG	2 cut(s)	40, 1695
Bpu1102I	GCTNAGC	1 cut(s)	104
BpuEI	CTTGAG	1 cut(s)	1919
BpuMI	CCSGG	1 cut(s)	479
Bsa29I	ATCGAT	1 cut(s)	1265
BsaBI	GATNNNNATC	2 cut(s)	337, 712
BsaI	GGTCTC	1 cut(s)	194
BsaJI	CCNNGG	6 cut(s)	109, 654, 731, 938, 939, 1420
BsaWI	WCCGGW	2 cut(s)	214, 418
Bsc4I	CCNNNNNNNGG	1 cut(s)	767
Bse1I	ACTGG	5 cut(s)	314, 1017, 1066, 1691, 1871
Bse3DI	GCAATG	3 cut(s)	124, 871, 1949
Bse8I	GATNNNNATC	2 cut(s)	337, 712
BseAI	TCCGGA	1 cut(s)	214
BseBI	CCWGG	4 cut(s)	58, 671, 940, 1674
BseCI	ATCGAT	1 cut(s)	1265
BseDI	CCNNGG	6 cut(s)	109, 654, 731, 938, 939, 1420
BseGI	GGATG	6 cut(s)	679, 742, 1210, 1559, 1852, 1929
BseJI	GATNNNNATC	2 cut(s)	337, 712
BseLI	CCNNNNNNNGG	1 cut(s)	767
BseMI	GCAATG	3 cut(s)	124, 871, 1949
BseMII	CTCAG	7 cut(s)	95, 198, 333, 387, 560, 804, 1818
BseNI	ACTGG	5 cut(s)	314, 1017, 1066, 1691, 1871
BseRI	GAGGAG	1 cut(s)	477
BseSI	GKGCMC	3 cut(s)	939, 1495, 1654
BseXI	GCAGC	6 cut(s)	25, 101, 734, 762, 1285, 1951
BseYI	CCCAGC	1 cut(s)	1889
Bsh1236I	CGCG	4 cut(s)	150, 157, 1104, 1434
BshFI	GGCC	2 cut(s)	1577, 1672
BshNI	GGYRCC	1 cut(s)	1492
BshVI	ATCGAT	1 cut(s)	1265
BsiHKAI	GWGCWC	1 cut(s)	1654
BsiSI	CCGG	3 cut(s)	215, 419, 479
BslFI	GGGAC	4 cut(s)	275, 461, 1431, 1765
BslI	CCNNNNNNNGG	1 cut(s)	767
BsmAI	GTCTC	6 cut(s)	194, 322, 367, 420, 555, 1655
BsmFI	GGGAC	4 cut(s)	275, 461, 1431, 1765
BsmI	GAATGC	1 cut(s)	649
BsnI	GGCC	2 cut(s)	1577, 1672
Bso31I	GGTCTC	1 cut(s)	194
Bsp1286I	GDGCHC	3 cut(s)	939, 1495, 1654
Bsp13I	TCCGGA	1 cut(s)	214
Bsp1407I	TGTACA	1 cut(s)	1485
Bsp143I	GATC	9 cut(s)	332, 399, 877, 1000, 1245, 1363, 1766, 1795, 1822
Bsp1720I	GCTNAGC	1 cut(s)	104
Bsp19I	CCATGG	1 cut(s)	109
Bsp68I	TCGCGA	2 cut(s)	150, 157
BspACI	CCGC	2 cut(s)	646, 869
BspANI	GGCC	2 cut(s)	1577, 1672
BspCNI	CTCAG	7 cut(s)	96, 197, 332, 388, 559, 803, 1819
BspDI	ATCGAT	1 cut(s)	1265
BspEI	TCCGGA	1 cut(s)	214
BspFNI	CGCG	4 cut(s)	150, 157, 1104, 1434
BspHI	TCATGA	3 cut(s)	352, 1339, 1918
BspLI	GGNNCC	2 cut(s)	660, 1494
BspMAI	CTGCAG	2 cut(s)	752, 934
BspMI	ACCTGC	1 cut(s)	628
BspPI	GGATC	3 cut(s)	1774, 1803, 1817
BspQI	GCTCTTC	1 cut(s)	918
BspT107I	GGYRCC	1 cut(s)	1492
BspTNI	GGTCTC	1 cut(s)	194
BsrDI	GCAATG	3 cut(s)	124, 871, 1949
BsrGI	TGTACA	1 cut(s)	1485
BsrI	ACTGG	5 cut(s)	314, 1017, 1066, 1691, 1871
BssECI	CCNNGG	6 cut(s)	109, 654, 731, 938, 939, 1420
BssMI	GATC	9 cut(s)	332, 399, 877, 1000, 1245, 1363, 1766, 1795, 1822
BssT1I	CCWWGG	3 cut(s)	109, 731, 1420
Bst2UI	CCWGG	4 cut(s)	58, 671, 940, 1674
Bst4CI	ACNGT	1 cut(s)	1843
Bst6I	CTCTTC	8 cut(s)	230, 264, 401, 432, 437, 775, 837, 918
BstAPI	GCANNNNNTGC	1 cut(s)	643
BstAUI	TGTACA	1 cut(s)	1485
BstC8I	GCNNGC	2 cut(s)	871, 930
BstDEI	CTNAG	8 cut(s)	104, 184, 319, 396, 546, 790, 1827, 1856
BstDSI	CCRYGG	1 cut(s)	109
BstF5I	GGATG	6 cut(s)	679, 742, 1210, 1559, 1852, 1929
BstFNI	CGCG	4 cut(s)	150, 157, 1104, 1434
BstH2I	RGCGCY	1 cut(s)	1026
BstHHI	GCGC	4 cut(s)	1025, 1104, 1737, 1836
BstKTI	GATC	9 cut(s)	335, 402, 880, 1003, 1248, 1366, 1769, 1798, 1825
BstMAI	GTCTC	6 cut(s)	194, 322, 367, 420, 555, 1655
BstMBI	GATC	9 cut(s)	332, 399, 877, 1000, 1245, 1363, 1766, 1795, 1822
BstMWI	GCNNNNNNNGC	4 cut(s)	114, 643, 870, 934
BstNI	CCWGG	4 cut(s)	58, 671, 940, 1674
BstNSI	RCATGY	4 cut(s)	860, 961, 1384, 1758
BstSCI	CCNGG	5 cut(s)	56, 477, 669, 938, 1672
BstSFI	CTRYAG	4 cut(s)	748, 930, 1039, 1527
BstSLI	GKGCMC	3 cut(s)	939, 1495, 1654
BstUI	CGCG	4 cut(s)	150, 157, 1104, 1434
BstV1I	GCAGC	6 cut(s)	25, 101, 734, 762, 1285, 1951
BstX2I	RGATCY	2 cut(s)	1363, 1795
BstYI	RGATCY	2 cut(s)	1363, 1795
Bsu15I	ATCGAT	1 cut(s)	1265
BsuI	GTATCC	2 cut(s)	897, 1690
BsuRI	GGCC	2 cut(s)	1577, 1672
BsuTUI	ATCGAT	1 cut(s)	1265
BtgI	CCRYGG	1 cut(s)	109
BtgZI	GCGATG	1 cut(s)	1119
BtsCI	GGATG	6 cut(s)	679, 742, 1210, 1559, 1852, 1929
BtsI	GCAGTG	1 cut(s)	939
BtsIMutI	CAGTG	5 cut(s)	832, 939, 1010, 1698, 1848
BtuMI	TCGCGA	2 cut(s)	150, 157
BveI	ACCTGC	1 cut(s)	628
Cac8I	GCNNGC	2 cut(s)	871, 930
CaiI	CAGNNNCTG	1 cut(s)	643
CciI	TCATGA	3 cut(s)	352, 1339, 1918
CfoI	GCGC	4 cut(s)	1025, 1104, 1737, 1836
ClaI	ATCGAT	1 cut(s)	1265
CseI	GACGC	1 cut(s)	1946
Csp6I	GTAC	3 cut(s)	988, 1486, 1522
CspCI	CAANNNNNGTGG	2 cut(s)	106, 141
CviQI	GTAC	3 cut(s)	988, 1486, 1522
DdeI	CTNAG	8 cut(s)	104, 184, 319, 396, 546, 790, 1827, 1856
DpnI	GATC	9 cut(s)	334, 401, 879, 1002, 1247, 1365, 1768, 1797, 1824
DpnII	GATC	9 cut(s)	332, 399, 877, 1000, 1245, 1363, 1766, 1795, 1822
DraI	TTTAAA	2 cut(s)	1699, 1900
DraIII	CACNNNGTG	1 cut(s)	1016
EaeI	YGGCCR	1 cut(s)	1575
Eam1104I	CTCTTC	8 cut(s)	230, 264, 401, 432, 437, 775, 837, 918
EarI	CTCTTC	8 cut(s)	230, 264, 401, 432, 437, 775, 837, 918
Eco130I	CCWWGG	3 cut(s)	109, 731, 1420
Eco31I	GGTCTC	1 cut(s)	194
Eco32I	GATATC	1 cut(s)	456
Eco57I	CTGAAG	4 cut(s)	591, 947, 1472, 1770
EcoRII	CCWGG	4 cut(s)	56, 669, 938, 1672
EcoRV	GATATC	1 cut(s)	456
EcoT14I	CCWWGG	3 cut(s)	109, 731, 1420
ErhI	CCWWGG	3 cut(s)	109, 731, 1420
FaqI	GGGAC	4 cut(s)	275, 461, 1431, 1765
FauI	CCCGC	1 cut(s)	862
FauNDI	CATATG	1 cut(s)	1819
FbaI	TGATCA	2 cut(s)	877, 1000
FblI	GTMKAC	2 cut(s)	375, 1038
Fnu4HI	GCNGC	7 cut(s)	14, 115, 647, 748, 751, 1274, 1940
FokI	GGATG	6 cut(s)	686, 749, 1217, 1566, 1859, 1916
Fsp4HI	GCNGC	7 cut(s)	14, 115, 647, 748, 751, 1274, 1940
FspBI	CTAG	5 cut(s)	495, 690, 816, 996, 1911
FspI	TGCGCA	1 cut(s)	1736
GlaI	GCGC	4 cut(s)	1024, 1103, 1736, 1835
GluI	GCNGC	7 cut(s)	14, 115, 647, 748, 751, 1274, 1940
GsaI	CCCAGC	1 cut(s)	1893
GsuI	CTGGAG	2 cut(s)	40, 1695
HaeII	RGCGCY	1 cut(s)	1026
HaeIII	GGCC	2 cut(s)	1577, 1672
HapII	CCGG	3 cut(s)	215, 419, 479
HgaI	GACGC	1 cut(s)	1946
HhaI	GCGC	4 cut(s)	1025, 1104, 1737, 1836
Hin6I	GCGC	4 cut(s)	1023, 1102, 1735, 1834
HinP1I	GCGC	4 cut(s)	1023, 1102, 1735, 1834
HincII	GTYRAC	1 cut(s)	376
HindII	GTYRAC	1 cut(s)	376
HpaII	CCGG	3 cut(s)	215, 419, 479
HphI	GGTGA	7 cut(s)	327, 1028, 1099, 1154, 1318, 1412, 1761
Hpy166II	GTNNAC	5 cut(s)	376, 854, 1039, 1198, 1652
Hpy8I	GTNNAC	5 cut(s)	376, 854, 1039, 1198, 1652
HpyCH4III	ACNGT	1 cut(s)	1843
HpyCH4V	TGCA	7 cut(s)	117, 637, 750, 932, 953, 972, 1652
HpyF10VI	GCNNNNNNNGC	4 cut(s)	114, 643, 870, 934
HpyF3I	CTNAG	8 cut(s)	104, 184, 319, 396, 546, 790, 1827, 1856
HspAI	GCGC	4 cut(s)	1023, 1102, 1735, 1834
Kpn2I	TCCGGA	1 cut(s)	214
Ksp22I	TGATCA	2 cut(s)	877, 1000
Kzo9I	GATC	9 cut(s)	332, 399, 877, 1000, 1245, 1363, 1766, 1795, 1822
LguI	GCTCTTC	1 cut(s)	918
LmnI	GCTCC	3 cut(s)	804, 1270, 1954
Lsp1109I	GCAGC	6 cut(s)	25, 101, 734, 762, 1285, 1951
LweI	GCATC	3 cut(s)	722, 1618, 1840
MaeI	CTAG	5 cut(s)	495, 690, 816, 996, 1911
MaeIII	GTNAC	6 cut(s)	421, 428, 481, 1415, 1428, 1474
MalI	GATC	9 cut(s)	334, 401, 879, 1002, 1247, 1365, 1768, 1797, 1824
MboI	GATC	9 cut(s)	332, 399, 877, 1000, 1245, 1363, 1766, 1795, 1822
MfeI	CAATTG	3 cut(s)	386, 1345, 1533
MflI	RGATCY	2 cut(s)	1363, 1795
MhlI	GDGCHC	3 cut(s)	939, 1495, 1654
MlsI	TGGCCA	1 cut(s)	1577
MluNI	TGGCCA	1 cut(s)	1577
MlyI	GAGTC	6 cut(s)	381, 538, 719, 751, 1453, 1996
MmeI	TCCRAC	3 cut(s)	1299, 1531, 1773
Mox20I	TGGCCA	1 cut(s)	1577
MroI	TCCGGA	1 cut(s)	214
MroXI	GAANNNNTTC	2 cut(s)	40, 86
MscI	TGGCCA	1 cut(s)	1577
MseI	TTAA	9 cut(s)	99, 1130, 1296, 1698, 1707, 1713, 1814, 1872, 1899
MslI	CAYNNNNRTG	1 cut(s)	1841
Msp20I	TGGCCA	1 cut(s)	1577
MspA1I	CMGCKG	2 cut(s)	16, 883
MspI	CCGG	3 cut(s)	215, 419, 479
MspR9I	CCNGG	5 cut(s)	58, 479, 671, 940, 1674
MunI	CAATTG	3 cut(s)	386, 1345, 1533
Mva1269I	GAATGC	1 cut(s)	649
MvaI	CCWGG	4 cut(s)	58, 671, 940, 1674
MvnI	CGCG	4 cut(s)	150, 157, 1104, 1434
MwoI	GCNNNNNNNGC	4 cut(s)	114, 643, 870, 934
NciI	CCSGG	1 cut(s)	479
NcoI	CCATGG	1 cut(s)	109
NdeI	CATATG	1 cut(s)	1819
NdeII	GATC	9 cut(s)	332, 399, 877, 1000, 1245, 1363, 1766, 1795, 1822
NlaIV	GGNNCC	2 cut(s)	660, 1494
NmuCI	GTSAC	5 cut(s)	428, 481, 1415, 1428, 1474
NruI	TCGCGA	2 cut(s)	150, 157
NsbI	TGCGCA	1 cut(s)	1736
NspI	RCATGY	4 cut(s)	860, 961, 1384, 1758
PagI	TCATGA	3 cut(s)	352, 1339, 1918
PasI	CCCWGGG	1 cut(s)	939
PciI	ACATGT	2 cut(s)	856, 1754
PciSI	GCTCTTC	1 cut(s)	918
PcsI	WCGNNNNNNNCGW	1 cut(s)	154
PctI	GAATGC	1 cut(s)	649
PdmI	GAANNNNTTC	2 cut(s)	40, 86
PfeI	GAWTC	7 cut(s)	41, 65, 152, 188, 693, 893, 1262
PflFI	GACNNNGTC	1 cut(s)	547
PfoI	TCCNGGA	1 cut(s)	56
PkrI	GCNGC	7 cut(s)	15, 116, 648, 749, 752, 1275, 1941
PleI	GAGTC	6 cut(s)	380, 538, 719, 751, 1452, 1995
PpsI	GAGTC	6 cut(s)	380, 538, 719, 751, 1452, 1995
PscI	ACATGT	2 cut(s)	856, 1754
PsiI	TTATAA	1 cut(s)	78
Psp6I	CCWGG	4 cut(s)	56, 669, 938, 1672
PspFI	CCCAGC	1 cut(s)	1889
PspGI	CCWGG	4 cut(s)	56, 669, 938, 1672
PspN4I	GGNNCC	2 cut(s)	660, 1494
PstI	CTGCAG	2 cut(s)	752, 934
PstNI	CAGNNNCTG	1 cut(s)	643
PsuI	RGATCY	2 cut(s)	1363, 1795
PsyI	GACNNNGTC	1 cut(s)	547
PvuII	CAGCTG	2 cut(s)	16, 883
RruI	TCGCGA	2 cut(s)	150, 157
RsaI	GTAC	3 cut(s)	989, 1487, 1523
RsaNI	GTAC	3 cut(s)	988, 1486, 1522
RseI	CAYNNNNRTG	1 cut(s)	1841
SalI	GTCGAC	1 cut(s)	374
SapI	GCTCTTC	1 cut(s)	918
SaqAI	TTAA	9 cut(s)	99, 1130, 1296, 1698, 1707, 1713, 1814, 1872, 1899
SatI	GCNGC	7 cut(s)	14, 115, 647, 748, 751, 1274, 1940
Sau3AI	GATC	9 cut(s)	332, 399, 877, 1000, 1245, 1363, 1766, 1795, 1822
ScaI	AGTACT	2 cut(s)	989, 1523
SchI	GAGTC	6 cut(s)	381, 538, 719, 751, 1453, 1996
ScrFI	CCNGG	5 cut(s)	58, 479, 671, 940, 1674
SduI	GDGCHC	3 cut(s)	939, 1495, 1654
SfaNI	GCATC	3 cut(s)	722, 1618, 1840
SfcI	CTRYAG	4 cut(s)	748, 930, 1039, 1527
SmiMI	CAYNNNNRTG	1 cut(s)	1841
SmlI	CTYRAG	1 cut(s)	1934
SmoI	CTYRAG	1 cut(s)	1934
SpeI	ACTAGT	1 cut(s)	995
SsiI	CCGC	2 cut(s)	646, 869
SspI	AATATT	1 cut(s)	910
SspMI	CTAG	5 cut(s)	495, 690, 816, 996, 1911
StyD4I	CCNGG	5 cut(s)	56, 477, 669, 938, 1672
StyI	CCWWGG	3 cut(s)	109, 731, 1420
TaaI	ACNGT	1 cut(s)	1843
TaqI	TCGA	4 cut(s)	296, 375, 755, 1265
TatI	WGTACW	3 cut(s)	987, 1485, 1521
TauI	GCSGC	1 cut(s)	649
TfiI	GAWTC	7 cut(s)	41, 65, 152, 188, 693, 893, 1262
Tru1I	TTAA	9 cut(s)	99, 1130, 1296, 1698, 1707, 1713, 1814, 1872, 1899
Tru9I	TTAA	9 cut(s)	99, 1130, 1296, 1698, 1707, 1713, 1814, 1872, 1899
TscAI	CASTG	5 cut(s)	832, 939, 1017, 1698, 1848
TseFI	GTSAC	5 cut(s)	428, 481, 1415, 1428, 1474
TseI	GCWGC	6 cut(s)	13, 114, 747, 750, 1273, 1939
Tsp45I	GTSAC	5 cut(s)	428, 481, 1415, 1428, 1474
TspDTI	ATGAA	8 cut(s)	156, 341, 1068, 1094, 1122, 1328, 1607, 1907
TspRI	CASTG	5 cut(s)	832, 939, 1017, 1698, 1848
Tth111I	GACNNNGTC	1 cut(s)	547
VneI	GTGCAC	1 cut(s)	1650
XapI	RAATTY	3 cut(s)	131, 526, 1742
XceI	RCATGY	4 cut(s)	860, 961, 1384, 1758
XmiI	GTMKAC	2 cut(s)	375, 1038
XmnI	GAANNNNTTC	2 cut(s)	40, 86
XspI	CTAG	5 cut(s)	495, 690, 816, 996, 1911
ZrmI	AGTACT	2 cut(s)	989, 1523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.