Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0002301

Physical Location & Seq

Genomic Coordinates Reverse (-)

8638791 .. 8640827

Gene Structure 2037 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG115700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGGCGACAGGGCAGGTTGATGTTTTGAGAAGAAGGGATTCTCCTAAATACTCCAGGAGAGAATTTGGGTATTATAAGAATGGGTTCTCTGGTGTTAAGCTGAGCCATGGCCGCCATGATGGTGGCAAATTTAGAGATGAAGTTCGCGATTCGCGAAGATGGAGAGGGCAATCAAATGTCTCAGAAACGTTGGTTGAGACCAGAAAAACTCCGGAGAAGGAGAAGGAGAAGAAGAGGAAGTTTTCTCCTGTTATATGGGACAGAGAAGAGAAGAAATTAGTAAGGGTATCATCGAAGAATGGAGCTGTTCCAGTCTCAGTTGTTTCTCGGTCATCTCCTCTAAAGAGAACATCAAGATCAACATCTTGTGAGGTTCATGATGTTGTCTCCGAAGGAGTCGACAGAGTTCAATTGCTTCCTGAGATCAGGAAGAGGAAGTCTCCGGTTACAAGTGACAGGGAAGAGAAGAGAGTGAGGATATCATCAAAGAATAGATTTGTCCCGGTCACTCCTCCATCTAGTGTAATTGTTTCCGATGGGGTTGTTTCAAATTCTCCTGCTTCACAGACTCAGTCTCATGGAGTGGAGGGTTCTGAAGATAAACCTTCTGTGGCAGATGGGTTGGTGGAGATTTCTCAAATGGAAGCCCCTGCTGATTTGCAGGTTCGGCGGCATTACAAGGTACAAAATAACCTGGATGACAAAGACCAGATTAGCATCTCATTGTCAAGATGGGCATCTGACACTGACTCTCCAAGGGATGATGTTAGCTGCAGCTCGACTACTGAAAGTGGCGAAATCCGAAGAGAAGGCTCAGTTGCGGATAGGAGCAGAACTTCTAGCTCTGTCAGTGGAGATGGTGGAGAAGAGATTAGTGGACATGTTGGCAATGCGGGCGTTGATCAGCTGTATCCTGATTCAGATGACGAAAATATTGCTCGGATTGAAGAGCCTGCAGTGCCCAGGGGAAGAAGTGCAAACATGCTTCAGGGTTGCAGAAGTAGTCAGGAGTACTATACTAGTGATCAAGAGGCACTGGGTGAAGGCACTTATGGTGTAGTCTACAGAGCGAGAGATGAACAAACTGGGGAAATTGTAGCCATGAAGAAGGTGAAGATGGATAAGTGCGATGAAGGTTTCCCTATTACATCATTGAGAGAAATAAACATTCTTTTGTCATGTAATCACCCTTCCATTGTGGGTGTGAAGGAAGTTGTTGTGGACAAGGATGATGATATTCTTATGGTTATGGAGTATATGGACTATGAGCTCAAGTTTCTAATGGAATCGATGGAGCAGCGATTTAGTATAGGCGAAGTTAAATACTTGGTGAAAAGGCTGTTGGAGGGTGTAAAGTATCTTCATGACAATTGGGTTCTTCACAGAGATCTGAAAACTTCGAACATGCTTTTGAACAAGGAGGGTGAATTGAAAATATGTGACCTTGGGTTGTCACGCCAGTATGGGAGTCCCCTGAAGCCTTATACTTCCAATGTGGTCACTTTGTTGTACAGGGCACCTGAACTTCTATTAGGTCAAAAGCAGTACTCTACAGCAATTGATATGTGGTCAGTTGGATGTATAATGGCTGAACTTTTGGCCAAAGAACCACTATTCAGTCCGAAAACGCCAACCGAAGTTCATCAGCTCGACGCGATTTTTGATACTCTTGGTGCACCAAACGAGACAGATTGGCCTGGAGTATCCAAATTGCCAGTGTTTAAAGCTATTAAGATTAAAAAAGGGGAGAACAATCTGCGCAAGAAATTTTGTGGGACACGTTTCACAGGATCACCAATGCTTACTGCTTCAGGGTTGGATCTGTTGACAAAACTTTTAACATATGATCCTGAGAAGCGGATAACAGTGGATGATGCTCTTAGCCATGACTGGTTTAAGGACTACCCTGAACCCAGCCCTTTTAAACCTTCTCCTAGTGTTCATGACAGCTACATCCTCAAGCAGCAATGGGAAAGGCAGCGTCAGGAAAGAAAGAGAGAGGAAAGTGAGCGTCGTAGAAGGGAGAAAAGGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006139 GO:0006396 GO:0006397 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008380 GO:0009555 GO:0009653 GO:0009889 GO:0009987 GO:0010208 GO:0010467 GO:0010468 GO:0010556 GO:0010584 GO:0010675 GO:0010927 GO:0010962 GO:0016043 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022607 GO:0030198 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0032950 GO:0032951 GO:0032952 GO:0032953 GO:0032989 GO:0034641 GO:0036211 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045229 GO:0046483 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0085029 GO:0090304 GO:0097472 GO:0140096 GO:1901360 GO:1901564 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

678

Amino Acids

76.79

Weight (kDa)

8.36

Isoelectric Point (pI)

59.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	343 - 632	3.3e-70	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	343 - 537	6.6e-32	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370 AT5G63370
fragaria_vesca	FvH4_5g07740
malus_domestica	MD06G1147400.v1.1 MD06G1147600.v1.1 MD14G1161600.v1.1
prunus_persica	Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1 Prupe.5G154500_v2.0.a1
pyrus_communis	pycom06g13700
rosa_chinensis	RchiOBHm_Chr7g0190701 RchiOBHm_Chr7g0190711
rosa_laevigata	RLG00000004502
rosa_multiflora	Rmu_co8410623.1_g000001 Rmu_sc0006709.1_g000001 Rmu_sc0014053.1_g000001 Rmu_sc0021017.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264390
rosa_rugosa	Rorug06G0506600 Rorug06G0506700
rosa_samantha	Rh7AG113100 Rh7AG113200 Rh7BG115600 Rh7BG115700 Rh7CG118100 Rh7CG118200 Rh7DG117000 Rh7DG117100
rosa_wichuraiana	Rw7G009870 Rw7G009880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	75
Acc16I	TGCGCA	1 cut(s)	1760
Acc36I	ACCTGC	2 cut(s)	4, 652
AccB1I	GGYRCC	1 cut(s)	1516
AccI	GTMKAC	2 cut(s)	399, 1062
AccII	CGCG	3 cut(s)	147, 154, 1655
AccIII	TCCGGA	1 cut(s)	211
AciI	CCGC	5 cut(s)	112, 670, 821, 893, 1858
AclI	AACGTT	1 cut(s)	188
AclWI	GGATC	3 cut(s)	1798, 1827, 1841
AcoI	YGGCCR	2 cut(s)	109, 1599
AcsI	RAATTY	4 cut(s)	62, 128, 550, 1766
AcuI	CTGAAG	4 cut(s)	615, 971, 1496, 1794
AdeI	CACNNNGTG	1 cut(s)	1040
AfaI	GTAC	4 cut(s)	684, 1013, 1511, 1547
AflIII	ACRYGT	2 cut(s)	880, 1778
AgsI	TTSAA	5 cut(s)	410, 549, 947, 1414, 1432
AhlI	ACTAGT	1 cut(s)	1019
AjnI	CCWGG	4 cut(s)	53, 693, 962, 1696
AjuI	GAANNNNNNNTTGG	2 cut(s)	1325, 1357
Alw21I	GWGCWC	2 cut(s)	1272, 1678
Alw26I	GTCTC	7 cut(s)	184, 191, 319, 391, 444, 579, 1679
Alw44I	GTGCAC	1 cut(s)	1674
AlwI	GGATC	3 cut(s)	1798, 1827, 1841
Aor13HI	TCCGGA	1 cut(s)	211
AoxI	GGCC	3 cut(s)	109, 1599, 1694
ApaLI	GTGCAC	1 cut(s)	1674
ApeKI	GCWGC	5 cut(s)	771, 774, 1297, 1963, 1978
ApoI	RAATTY	4 cut(s)	62, 128, 550, 1766
ArsI	GACNNNNNNTTYG	2 cut(s)	1643, 1675
Asp700I	GAANNNNTTC	2 cut(s)	37, 83
AspLEI	GCGC	1 cut(s)	1761
AsuC2I	CCSGG	1 cut(s)	503
AsuHPI	GGTGA	6 cut(s)	1052, 1123, 1178, 1342, 1436, 1785
AsuII	TTCGAA	1 cut(s)	1400
BaeGI	GKGCMC	3 cut(s)	963, 1519, 1678
BalI	TGGCCA	1 cut(s)	1601
BanI	GGYRCC	1 cut(s)	1516
BanII	GRGCYC	1 cut(s)	1272
BarI	GAAGNNNNNNTAC	4 cut(s)	1174, 1206, 1344, 1376
Bbv12I	GWGCWC	2 cut(s)	1272, 1678
BbvI	GCAGC	5 cut(s)	758, 786, 1309, 1975, 1990
BccI	CCATC	9 cut(s)	113, 153, 523, 530, 611, 726, 851, 1111, 1285
BcgI	CGANNNNNNTGC	2 cut(s)	917, 951
BciT130I	CCWGG	4 cut(s)	55, 695, 964, 1698
BciVI	GTATCC	2 cut(s)	921, 1714
BclI	TGATCA	2 cut(s)	901, 1024
BcnI	CCSGG	1 cut(s)	503
BcoDI	GTCTC	7 cut(s)	184, 191, 319, 391, 444, 579, 1679
BcuI	ACTAGT	1 cut(s)	1019
BfaI	CTAG	4 cut(s)	519, 840, 1020, 1935
BfmI	CTRYAG	4 cut(s)	772, 954, 1063, 1551
BfuAI	ACCTGC	2 cut(s)	4, 652
BfuI	GTATCC	2 cut(s)	921, 1714
BglII	AGATCT	1 cut(s)	1387
BisI	GCNGC	7 cut(s)	112, 671, 772, 775, 1298, 1964, 1979
BlpI	GCTNAGC	1 cut(s)	101
BlsI	GCNGC	7 cut(s)	113, 672, 773, 776, 1299, 1965, 1980
BmcAI	AGTACT	2 cut(s)	1013, 1547
Bme1390I	CCNGG	5 cut(s)	55, 503, 695, 964, 1698
BmiI	GGNNCC	1 cut(s)	1518
BmrFI	CCNGG	5 cut(s)	55, 503, 695, 964, 1698
BmrI	ACTGGG	2 cut(s)	1046, 1095
BmsI	GCATC	3 cut(s)	726, 746, 1864
BmuI	ACTGGG	2 cut(s)	1046, 1095
BplI	GAGNNNNNCTC	2 cut(s)	424, 456
BpmI	CTGGAG	2 cut(s)	37, 1719
Bpu1102I	GCTNAGC	1 cut(s)	101
Bpu14I	TTCGAA	1 cut(s)	1400
BpuEI	CTTGAG	2 cut(s)	1256, 1943
BpuMI	CCSGG	1 cut(s)	503
Bsa29I	ATCGAT	1 cut(s)	1289
BsaBI	GATNNNNATC	3 cut(s)	361, 716, 736
BsaI	GGTCTC	1 cut(s)	191
BsaJI	CCNNGG	5 cut(s)	106, 755, 962, 963, 1444
BsaWI	WCCGGW	2 cut(s)	211, 442
BsaXI	ACNNNNNCTCC	2 cut(s)	736, 766
Bse1I	ACTGG	6 cut(s)	311, 1041, 1090, 1459, 1715, 1895
Bse3DI	GCAATG	2 cut(s)	895, 1973
Bse8I	GATNNNNATC	3 cut(s)	361, 716, 736
BseAI	TCCGGA	1 cut(s)	211
BseBI	CCWGG	4 cut(s)	55, 695, 964, 1698
BseCI	ATCGAT	1 cut(s)	1289
BseDI	CCNNGG	5 cut(s)	106, 755, 962, 963, 1444
BseGI	GGATG	6 cut(s)	703, 766, 1234, 1583, 1876, 1953
BseJI	GATNNNNATC	3 cut(s)	361, 716, 736
BseMI	GCAATG	2 cut(s)	895, 1973
BseMII	CTCAG	7 cut(s)	92, 195, 330, 411, 584, 828, 1842
BseNI	ACTGG	6 cut(s)	311, 1041, 1090, 1459, 1715, 1895
BseRI	GAGGAG	2 cut(s)	327, 501
BseSI	GKGCMC	3 cut(s)	963, 1519, 1678
BseXI	GCAGC	5 cut(s)	758, 786, 1309, 1975, 1990
BseYI	CCCAGC	1 cut(s)	1913
Bsh1236I	CGCG	3 cut(s)	147, 154, 1655
BshFI	GGCC	3 cut(s)	111, 1601, 1696
BshNI	GGYRCC	1 cut(s)	1516
BshVI	ATCGAT	1 cut(s)	1289
BsiHKAI	GWGCWC	2 cut(s)	1272, 1678
BsiSI	CCGG	3 cut(s)	212, 443, 503
BslFI	GGGAC	4 cut(s)	272, 485, 1455, 1789
BsmAI	GTCTC	7 cut(s)	184, 191, 319, 391, 444, 579, 1679
BsmFI	GGGAC	4 cut(s)	272, 485, 1455, 1789
BsnI	GGCC	3 cut(s)	111, 1601, 1696
Bso31I	GGTCTC	1 cut(s)	191
Bsp119I	TTCGAA	1 cut(s)	1400
Bsp1286I	GDGCHC	4 cut(s)	963, 1272, 1519, 1678
Bsp13I	TCCGGA	1 cut(s)	211
Bsp1407I	TGTACA	1 cut(s)	1509
Bsp143I	GATC	8 cut(s)	356, 423, 901, 1024, 1387, 1790, 1819, 1846
Bsp1720I	GCTNAGC	1 cut(s)	101
Bsp19I	CCATGG	1 cut(s)	106
Bsp68I	TCGCGA	2 cut(s)	147, 154
BspACI	CCGC	5 cut(s)	112, 670, 821, 893, 1858
BspANI	GGCC	3 cut(s)	111, 1601, 1696
BspCNI	CTCAG	7 cut(s)	93, 194, 329, 412, 583, 827, 1843
BspDI	ATCGAT	1 cut(s)	1289
BspEI	TCCGGA	1 cut(s)	211
BspFNI	CGCG	3 cut(s)	147, 154, 1655
BspHI	TCATGA	3 cut(s)	376, 1363, 1942
BspLI	GGNNCC	1 cut(s)	1518
BspMAI	CTGCAG	2 cut(s)	776, 958
BspMI	ACCTGC	2 cut(s)	4, 652
BspPI	GGATC	3 cut(s)	1798, 1827, 1841
BspQI	GCTCTTC	1 cut(s)	942
BspT104I	TTCGAA	1 cut(s)	1400
BspT107I	GGYRCC	1 cut(s)	1516
BspTNI	GGTCTC	1 cut(s)	191
BsrDI	GCAATG	2 cut(s)	895, 1973
BsrGI	TGTACA	1 cut(s)	1509
BsrI	ACTGG	6 cut(s)	311, 1041, 1090, 1459, 1715, 1895
BssECI	CCNNGG	5 cut(s)	106, 755, 962, 963, 1444
BssMI	GATC	8 cut(s)	356, 423, 901, 1024, 1387, 1790, 1819, 1846
BssT1I	CCWWGG	3 cut(s)	106, 755, 1444
Bst2UI	CCWGG	4 cut(s)	55, 695, 964, 1698
Bst4CI	ACNGT	1 cut(s)	1867
Bst6I	CTCTTC	8 cut(s)	227, 261, 425, 456, 461, 799, 861, 942
BstAUI	TGTACA	1 cut(s)	1509
BstBI	TTCGAA	1 cut(s)	1400
BstC8I	GCNNGC	2 cut(s)	895, 954
BstDEI	CTNAG	8 cut(s)	101, 181, 316, 420, 570, 814, 1851, 1880
BstDSI	CCRYGG	1 cut(s)	106
BstF5I	GGATG	6 cut(s)	703, 766, 1234, 1583, 1876, 1953
BstFNI	CGCG	3 cut(s)	147, 154, 1655
BstHHI	GCGC	1 cut(s)	1761
BstKTI	GATC	8 cut(s)	359, 426, 904, 1027, 1390, 1793, 1822, 1849
BstMAI	GTCTC	7 cut(s)	184, 191, 319, 391, 444, 579, 1679
BstMBI	GATC	8 cut(s)	356, 423, 901, 1024, 1387, 1790, 1819, 1846
BstMWI	GCNNNNNNNGC	4 cut(s)	111, 667, 894, 958
BstNI	CCWGG	4 cut(s)	55, 695, 964, 1698
BstNSI	RCATGY	3 cut(s)	884, 985, 1408
BstSCI	CCNGG	5 cut(s)	53, 501, 693, 962, 1696
BstSFI	CTRYAG	4 cut(s)	772, 954, 1063, 1551
BstSLI	GKGCMC	3 cut(s)	963, 1519, 1678
BstUI	CGCG	3 cut(s)	147, 154, 1655
BstV1I	GCAGC	5 cut(s)	758, 786, 1309, 1975, 1990
BstX2I	RGATCY	2 cut(s)	1387, 1819
BstXI	CCANNNNNNTGG	1 cut(s)	122
BstYI	RGATCY	2 cut(s)	1387, 1819
Bsu15I	ATCGAT	1 cut(s)	1289
BsuI	GTATCC	2 cut(s)	921, 1714
BsuRI	GGCC	3 cut(s)	111, 1601, 1696
BsuTUI	ATCGAT	1 cut(s)	1289
BtgI	CCRYGG	1 cut(s)	106
BtgZI	GCGATG	1 cut(s)	1143
BtsCI	GGATG	6 cut(s)	703, 766, 1234, 1583, 1876, 1953
BtsI	GCAGTG	1 cut(s)	963
BtsIMutI	CAGTG	6 cut(s)	744, 856, 963, 1034, 1722, 1872
BtuMI	TCGCGA	2 cut(s)	147, 154
BveI	ACCTGC	2 cut(s)	4, 652
Cac8I	GCNNGC	2 cut(s)	895, 954
CciI	TCATGA	3 cut(s)	376, 1363, 1942
CfoI	GCGC	1 cut(s)	1761
ClaI	ATCGAT	1 cut(s)	1289
CseI	GACGC	3 cut(s)	1661, 1970, 2000
Csp6I	GTAC	4 cut(s)	683, 1012, 1510, 1546
CviQI	GTAC	4 cut(s)	683, 1012, 1510, 1546
DdeI	CTNAG	8 cut(s)	101, 181, 316, 420, 570, 814, 1851, 1880
DpnI	GATC	8 cut(s)	358, 425, 903, 1026, 1389, 1792, 1821, 1848
DpnII	GATC	8 cut(s)	356, 423, 901, 1024, 1387, 1790, 1819, 1846
DraI	TTTAAA	2 cut(s)	1723, 1924
DraIII	CACNNNGTG	1 cut(s)	1040
EaeI	YGGCCR	2 cut(s)	109, 1599
Eam1104I	CTCTTC	8 cut(s)	227, 261, 425, 456, 461, 799, 861, 942
EarI	CTCTTC	8 cut(s)	227, 261, 425, 456, 461, 799, 861, 942
Ecl136II	GAGCTC	1 cut(s)	1270
Eco130I	CCWWGG	3 cut(s)	106, 755, 1444
Eco24I	GRGCYC	1 cut(s)	1272
Eco31I	GGTCTC	1 cut(s)	191
Eco32I	GATATC	1 cut(s)	480
Eco53kI	GAGCTC	1 cut(s)	1270
Eco57I	CTGAAG	4 cut(s)	615, 971, 1496, 1794
EcoICRI	GAGCTC	1 cut(s)	1270
EcoRII	CCWGG	4 cut(s)	53, 693, 962, 1696
EcoRV	GATATC	1 cut(s)	480
EcoT14I	CCWWGG	3 cut(s)	106, 755, 1444
EcoT38I	GRGCYC	1 cut(s)	1272
ErhI	CCWWGG	3 cut(s)	106, 755, 1444
FaqI	GGGAC	4 cut(s)	272, 485, 1455, 1789
FauI	CCCGC	1 cut(s)	886
FauNDI	CATATG	1 cut(s)	1843
FbaI	TGATCA	2 cut(s)	901, 1024
FblI	GTMKAC	2 cut(s)	399, 1062
Fnu4HI	GCNGC	7 cut(s)	112, 671, 772, 775, 1298, 1964, 1979
FokI	GGATG	6 cut(s)	710, 773, 1241, 1590, 1883, 1940
FriOI	GRGCYC	1 cut(s)	1272
Fsp4HI	GCNGC	7 cut(s)	112, 671, 772, 775, 1298, 1964, 1979
FspBI	CTAG	4 cut(s)	519, 840, 1020, 1935
FspI	TGCGCA	1 cut(s)	1760
GlaI	GCGC	1 cut(s)	1760
GluI	GCNGC	7 cut(s)	112, 671, 772, 775, 1298, 1964, 1979
GsaI	CCCAGC	1 cut(s)	1917
GsuI	CTGGAG	2 cut(s)	37, 1719
HaeIII	GGCC	3 cut(s)	111, 1601, 1696
HapII	CCGG	3 cut(s)	212, 443, 503
HgaI	GACGC	3 cut(s)	1661, 1970, 2000
HhaI	GCGC	1 cut(s)	1761
Hin6I	GCGC	1 cut(s)	1759
HinP1I	GCGC	1 cut(s)	1759
HincII	GTYRAC	2 cut(s)	400, 1827
HindII	GTYRAC	2 cut(s)	400, 1827
HinfI	GANTC	8 cut(s)	38, 149, 396, 568, 749, 917, 1286, 1468
HpaII	CCGG	3 cut(s)	212, 443, 503
HphI	GGTGA	6 cut(s)	1052, 1123, 1178, 1342, 1436, 1785
Hpy166II	GTNNAC	6 cut(s)	400, 878, 1063, 1222, 1676, 1827
Hpy8I	GTNNAC	6 cut(s)	400, 878, 1063, 1222, 1676, 1827
Hpy99I	CGWCG	2 cut(s)	1655, 2016
HpyCH4III	ACNGT	1 cut(s)	1867
HpyCH4IV	ACGT	2 cut(s)	188, 1780
HpyCH4V	TGCA	6 cut(s)	661, 774, 956, 977, 996, 1676
HpyF10VI	GCNNNNNNNGC	4 cut(s)	111, 667, 894, 958
HpyF3I	CTNAG	8 cut(s)	101, 181, 316, 420, 570, 814, 1851, 1880
HpySE526I	ACGT	2 cut(s)	188, 1780
HspAI	GCGC	1 cut(s)	1759
Kpn2I	TCCGGA	1 cut(s)	211
Ksp22I	TGATCA	2 cut(s)	901, 1024
Kzo9I	GATC	8 cut(s)	356, 423, 901, 1024, 1387, 1790, 1819, 1846
LguI	GCTCTTC	1 cut(s)	942
LmnI	GCTCC	3 cut(s)	302, 828, 1294
Lsp1109I	GCAGC	5 cut(s)	758, 786, 1309, 1975, 1990
LweI	GCATC	3 cut(s)	726, 746, 1864
MaeI	CTAG	4 cut(s)	519, 840, 1020, 1935
MaeII	ACGT	2 cut(s)	188, 1780
MaeIII	GTNAC	6 cut(s)	445, 452, 505, 1439, 1452, 1498
MalI	GATC	8 cut(s)	358, 425, 903, 1026, 1389, 1792, 1821, 1848
MboI	GATC	8 cut(s)	356, 423, 901, 1024, 1387, 1790, 1819, 1846
MfeI	CAATTG	3 cut(s)	410, 1369, 1557
MflI	RGATCY	2 cut(s)	1387, 1819
MhlI	GDGCHC	4 cut(s)	963, 1272, 1519, 1678
MlsI	TGGCCA	1 cut(s)	1601
MluNI	TGGCCA	1 cut(s)	1601
MlyI	GAGTC	4 cut(s)	405, 562, 743, 1477
MmeI	TCCRAC	3 cut(s)	1323, 1555, 1797
Mox20I	TGGCCA	1 cut(s)	1601
MroI	TCCGGA	1 cut(s)	211
MroXI	GAANNNNTTC	2 cut(s)	37, 83
MscI	TGGCCA	1 cut(s)	1601
MseI	TTAA	8 cut(s)	96, 1320, 1722, 1731, 1737, 1838, 1896, 1923
MslI	CAYNNNNRTG	1 cut(s)	120
Msp20I	TGGCCA	1 cut(s)	1601
MspA1I	CMGCKG	1 cut(s)	907
MspI	CCGG	3 cut(s)	212, 443, 503
MspR9I	CCNGG	5 cut(s)	55, 503, 695, 964, 1698
MunI	CAATTG	3 cut(s)	410, 1369, 1557
MvaI	CCWGG	4 cut(s)	55, 695, 964, 1698
MvnI	CGCG	3 cut(s)	147, 154, 1655
MwoI	GCNNNNNNNGC	4 cut(s)	111, 667, 894, 958
NciI	CCSGG	1 cut(s)	503
NcoI	CCATGG	1 cut(s)	106
NdeI	CATATG	1 cut(s)	1843
NdeII	GATC	8 cut(s)	356, 423, 901, 1024, 1387, 1790, 1819, 1846
NlaIV	GGNNCC	1 cut(s)	1518
NmuCI	GTSAC	5 cut(s)	452, 505, 1439, 1452, 1498
NruI	TCGCGA	2 cut(s)	147, 154
NsbI	TGCGCA	1 cut(s)	1760
NspI	RCATGY	3 cut(s)	884, 985, 1408
NspV	TTCGAA	1 cut(s)	1400
PagI	TCATGA	3 cut(s)	376, 1363, 1942
PasI	CCCWGGG	1 cut(s)	963
PciI	ACATGT	1 cut(s)	880
PciSI	GCTCTTC	1 cut(s)	942
PcsI	WCGNNNNNNNCGW	1 cut(s)	151
PdmI	GAANNNNTTC	2 cut(s)	37, 83
PfeI	GAWTC	4 cut(s)	38, 149, 917, 1286
PflFI	GACNNNGTC	1 cut(s)	571
PfoI	TCCNGGA	1 cut(s)	53
PkrI	GCNGC	7 cut(s)	113, 672, 773, 776, 1299, 1965, 1980
PleI	GAGTC	4 cut(s)	404, 562, 743, 1476
PpsI	GAGTC	4 cut(s)	404, 562, 743, 1476
PscI	ACATGT	1 cut(s)	880
PsiI	TTATAA	1 cut(s)	75
Psp124BI	GAGCTC	1 cut(s)	1272
Psp1406I	AACGTT	1 cut(s)	188
Psp6I	CCWGG	4 cut(s)	53, 693, 962, 1696
PspFI	CCCAGC	1 cut(s)	1913
PspGI	CCWGG	4 cut(s)	53, 693, 962, 1696
PspN4I	GGNNCC	1 cut(s)	1518
PstI	CTGCAG	2 cut(s)	776, 958
PsuI	RGATCY	2 cut(s)	1387, 1819
PsyI	GACNNNGTC	1 cut(s)	571
PvuII	CAGCTG	1 cut(s)	907
RruI	TCGCGA	2 cut(s)	147, 154
RsaI	GTAC	4 cut(s)	684, 1013, 1511, 1547
RsaNI	GTAC	4 cut(s)	683, 1012, 1510, 1546
RseI	CAYNNNNRTG	1 cut(s)	120
SacI	GAGCTC	1 cut(s)	1272
SalI	GTCGAC	1 cut(s)	398
SapI	GCTCTTC	1 cut(s)	942
SaqAI	TTAA	8 cut(s)	96, 1320, 1722, 1731, 1737, 1838, 1896, 1923
SatI	GCNGC	7 cut(s)	112, 671, 772, 775, 1298, 1964, 1979
Sau3AI	GATC	8 cut(s)	356, 423, 901, 1024, 1387, 1790, 1819, 1846
ScaI	AGTACT	2 cut(s)	1013, 1547
SchI	GAGTC	4 cut(s)	405, 562, 743, 1477
ScrFI	CCNGG	5 cut(s)	55, 503, 695, 964, 1698
SduI	GDGCHC	4 cut(s)	963, 1272, 1519, 1678
SfaNI	GCATC	3 cut(s)	726, 746, 1864
SfcI	CTRYAG	4 cut(s)	772, 954, 1063, 1551
SfuI	TTCGAA	1 cut(s)	1400
SmiMI	CAYNNNNRTG	1 cut(s)	120
SmlI	CTYRAG	2 cut(s)	1271, 1958
SmoI	CTYRAG	2 cut(s)	1271, 1958
SpeI	ACTAGT	1 cut(s)	1019
SsiI	CCGC	5 cut(s)	112, 670, 821, 893, 1858
SspI	AATATT	1 cut(s)	934
SspMI	CTAG	4 cut(s)	519, 840, 1020, 1935
SstI	GAGCTC	1 cut(s)	1272
StyD4I	CCNGG	5 cut(s)	53, 501, 693, 962, 1696
StyI	CCWWGG	3 cut(s)	106, 755, 1444
TaaI	ACNGT	1 cut(s)	1867
TaiI	ACGT	2 cut(s)	191, 1783
TaqI	TCGA	6 cut(s)	293, 399, 779, 1289, 1400, 1650
TaqII	GACCGA	1 cut(s)	318
TatI	WGTACW	3 cut(s)	1011, 1509, 1545
TauI	GCSGC	2 cut(s)	114, 673
TfiI	GAWTC	4 cut(s)	38, 149, 917, 1286
Tru1I	TTAA	8 cut(s)	96, 1320, 1722, 1731, 1737, 1838, 1896, 1923
Tru9I	TTAA	8 cut(s)	96, 1320, 1722, 1731, 1737, 1838, 1896, 1923
TscAI	CASTG	6 cut(s)	751, 856, 963, 1041, 1722, 1872
TseFI	GTSAC	5 cut(s)	452, 505, 1439, 1452, 1498
TseI	GCWGC	5 cut(s)	771, 774, 1297, 1963, 1978
Tsp45I	GTSAC	5 cut(s)	452, 505, 1439, 1452, 1498
TspDTI	ATGAA	8 cut(s)	153, 365, 1092, 1118, 1146, 1352, 1631, 1931
TspRI	CASTG	6 cut(s)	751, 856, 963, 1041, 1722, 1872
Tth111I	GACNNNGTC	1 cut(s)	571
VneI	GTGCAC	1 cut(s)	1674
XapI	RAATTY	4 cut(s)	62, 128, 550, 1766
XceI	RCATGY	3 cut(s)	884, 985, 1408
XmiI	GTMKAC	2 cut(s)	399, 1062
XmnI	GAANNNNTTC	2 cut(s)	37, 83
XspI	CTAG	4 cut(s)	519, 840, 1020, 1935
ZrmI	AGTACT	2 cut(s)	1013, 1547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.