Rh7AG113100

cyclin-dependent kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
8841522 .. 8845284
3763 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG113100.1

Sequence Viewer

Length: 1260 bp
ATGGATGATCGCAGCTGTAACTCAACTCCAGAAAGTGGGGAAATCCGAAGAGAAGACTCAGTTGAGCCTAGGAGCAGAACTTCTAGCTCTCATGAAGAAAGCGACTCTGTCACTGGAGAAGAGATTGGTGGAGTTGGTGGGAATGCAAGTGGTGGCCAGTTGTATCCTGACTCAGAGGATGATGAAGGTCTTCCTCAGATTGAAGAGTGTGTGGTGCCAAGAGGAAGAAGTACAAACATGCTTCAGGGATGCAGAAGTGTGGCCGAGTTTACTAAACTTGATGGGATGCTGGGTGAAGGCACTTATGGTGTTGTCTACAGAGCGAGAGATAAACAAACCGGAGAAATTGTAGCCATTAAGAAGGTGAAGATGGATAAGTCCAATGAAGGTTTCCCTATTACATCATTGAGAGAAATAAACATTCTTTTGTCTTGTAATCACCCTTCCATTGTGGGTGTGAAGGAAGTTGTTCACAACGGTGATGATATTTTTATGGTTATGGAGTGTATGGAATATGAGCTTAAGCTTCTAACGGAGGCGACAAAACAGCCATTTAGTATAGGCGAAGTTAAATACTTGATGAGAAGTCTGTTGGAGGGTGTGAAGTATCTTCATGACAATTGGGTTCTTCACAGAGATCTGAAAACTTCCAATATTCTTTTAAACAAGGAGGGTGAATTGAAAATATGTGACTTTGGTTTGTCACGCCAGTATGGGAGTCCCCTGAAGCCATATACTTCCCTAGTGGTCACTTTGTGGTACAGGGCACCTGAACTTCTATTAGGTCAAAAGCAGTATTCTACAGCAATTGATATGTGGTCAGTTGGATGTATAATGGCTGAACTTTTGGCCAAGGAAGCACTATTTCAAGGGAAAACCGAAGTTGATCAGCTTGACAAGATTTTCAGAACCCTTGGTACACCAAGTGAGACAGATTGGCCTGGGGTATCCAAATTGCCAGGCTTCAAAGCTATTCAGGTTAAACAACGGGAGAACCTTTTGCGCAAGAAATTTTCTGGGACATGTTTCACAGGATCCCCAATGCTCTCTGCTTCAGGGTTGGATTTGTTGACAAAACTTTTAACATACGACCCTGCGAAGCGGATAACAGTGGGTGATGCTCTTAGCCATGACTGGTTTAAAGACTATCCCGAACCCAGACCTTTCAAGCCTTCGCCTACTGTGCATGACAGGTACATGACCCTCAGGCAGCGTCAGGAAAGGGAGCATGTGGAAAGGGCGCGTCGTGGAAAGCGTTAA

Protein Analysis

419

Amino Acids

47.17

Weight (kDa)

6.15

Isoelectric Point (pI)

47.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 93 - 285 1.1e-33 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 95 - 380 4.8e-75 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1004
AccB1I GGYRCC 2 cut(s) 214, 766
AccB7I CCANNNNNTGG 1 cut(s) 35
AccI GTMKAC 1 cut(s) 315
AccII CGCG 1 cut(s) 1243
AciI CCGC 1 cut(s) 1102
AclWI GGATC 2 cut(s) 1029, 1042
AcoI YGGCCR 3 cut(s) 154, 261, 849
AcsI RAATTY 1 cut(s) 1010
AcuI CTGAAG 3 cut(s) 227, 746, 1038
AdeI CACNNNGTG 2 cut(s) 756, 926
AfaI GTAC 4 cut(s) 232, 761, 919, 1196
AfiI CCNNNNNNNGG 1 cut(s) 35
AflII CTTAAG 1 cut(s) 521
AflIII ACRYGT 1 cut(s) 1022
AgsI TTSAA 5 cut(s) 203, 682, 869, 967, 1168
AjnI CCWGG 2 cut(s) 940, 958
AjuI GAANNNNNNNTTGG 2 cut(s) 374, 406
AleI CACNNNNGTG 1 cut(s) 477
AluBI AGCT 6 cut(s) 15, 87, 520, 526, 892, 971
AluI AGCT 6 cut(s) 15, 87, 520, 526, 892, 971
Alw26I GTCTC 1 cut(s) 923
AlwI GGATC 2 cut(s) 1029, 1042
AoxI GGCC 4 cut(s) 154, 261, 849, 938
ApeKI GCWGC 2 cut(s) 12, 1210
ApoI RAATTY 1 cut(s) 1010
Asp700I GAANNNNTTC 2 cut(s) 189, 468
AspA2I CCTAGG 1 cut(s) 68
AspLEI GCGC 2 cut(s) 1005, 1243
AsuHPI GGTGA 6 cut(s) 305, 376, 431, 491, 686, 1127
AvrII CCTAGG 1 cut(s) 68
AxyI CCTNAGG 1 cut(s) 1205
BaeGI GKGCMC 1 cut(s) 769
BalI TGGCCA 2 cut(s) 156, 851
BamHI GGATCC 1 cut(s) 1034
BanI GGYRCC 2 cut(s) 214, 766
BarI GAAGNNNNNNTAC 2 cut(s) 427, 459
BbsI GAAGAC 2 cut(s) 60, 182
BbvI GCAGC 2 cut(s) 24, 1222
BccI CCATC 2 cut(s) 275, 364
BciT130I CCWGG 2 cut(s) 942, 960
BciVI GTATCC 2 cut(s) 174, 958
BclI TGATCA 1 cut(s) 886
BcoDI GTCTC 1 cut(s) 923
BfaI CTAG 3 cut(s) 69, 84, 743
BfmI CTRYAG 2 cut(s) 316, 801
BfrI CTTAAG 1 cut(s) 521
BfuI GTATCC 2 cut(s) 174, 958
BglII AGATCT 1 cut(s) 637
BisI GCNGC 2 cut(s) 13, 1211
BlnI CCTAGG 1 cut(s) 68
BlsI GCNGC 2 cut(s) 14, 1212
Bme1390I CCNGG 2 cut(s) 942, 960
BmiI GGNNCC 3 cut(s) 216, 768, 1036
BmrFI CCNGG 2 cut(s) 942, 960
BmsI GCATC 3 cut(s) 239, 276, 1108
BpiI GAAGAC 2 cut(s) 60, 182
BpmI CTGGAG 2 cut(s) 12, 135
BsaJI CCNNGG 4 cut(s) 68, 852, 913, 941
BsaWI WCCGGW 1 cut(s) 338
BsaXI ACNNNNNCTCC 2 cut(s) 333, 363
Bsc4I CCNNNNNNNGG 1 cut(s) 35
Bse1I ACTGG 4 cut(s) 118, 157, 709, 1139
Bse21I CCTNAGG 1 cut(s) 1205
BseBI CCWGG 2 cut(s) 942, 960
BseDI CCNNGG 4 cut(s) 68, 852, 913, 941
BseGI GGATG 5 cut(s) 10, 184, 254, 291, 833
BseLI CCNNNNNNNGG 1 cut(s) 35
BseMII CTCAG 4 cut(s) 72, 186, 209, 1219
BseNI ACTGG 4 cut(s) 118, 157, 709, 1139
BseSI GKGCMC 1 cut(s) 769
BseXI GCAGC 2 cut(s) 24, 1222
BseYI CCCAGC 1 cut(s) 289
Bsh1236I CGCG 1 cut(s) 1243
BshFI GGCC 4 cut(s) 156, 263, 851, 940
BshNI GGYRCC 2 cut(s) 214, 766
BsiSI CCGG 1 cut(s) 339
BslFI GGGAC 2 cut(s) 705, 1033
BslI CCNNNNNNNGG 1 cut(s) 35
BsmAI GTCTC 1 cut(s) 923
BsmFI GGGAC 2 cut(s) 705, 1033
BsmI GAATGC 1 cut(s) 148
BsnI GGCC 4 cut(s) 156, 263, 851, 940
Bsp1286I GDGCHC 1 cut(s) 769
Bsp143I GATC 4 cut(s) 7, 637, 886, 1034
BspACI CCGC 1 cut(s) 1102
BspANI GGCC 4 cut(s) 156, 263, 851, 940
BspCNI CTCAG 4 cut(s) 71, 185, 208, 1218
BspFNI CGCG 1 cut(s) 1243
BspHI TCATGA 2 cut(s) 91, 613
BspLI GGNNCC 3 cut(s) 216, 768, 1036
BspPI GGATC 2 cut(s) 1029, 1042
BspT107I GGYRCC 2 cut(s) 214, 766
BspTI CTTAAG 1 cut(s) 521
BsrI ACTGG 4 cut(s) 118, 157, 709, 1139
BssECI CCNNGG 4 cut(s) 68, 852, 913, 941
BssMI GATC 4 cut(s) 7, 637, 886, 1034
BssT1I CCWWGG 3 cut(s) 68, 852, 913
Bst2UI CCWGG 2 cut(s) 942, 960
Bst4CI ACNGT 3 cut(s) 479, 1111, 1183
Bst6I CTCTTC 3 cut(s) 43, 114, 198
BstAFI CTTAAG 1 cut(s) 521
BstDEI CTNAG 5 cut(s) 58, 172, 195, 1124, 1205
BstF5I GGATG 5 cut(s) 10, 184, 254, 291, 833
BstFNI CGCG 1 cut(s) 1243
BstHHI GCGC 2 cut(s) 1005, 1243
BstKTI GATC 4 cut(s) 10, 640, 889, 1037
BstMAI GTCTC 1 cut(s) 923
BstMBI GATC 4 cut(s) 7, 637, 886, 1034
BstMWI GCNNNNNNNGC 2 cut(s) 857, 1183
BstNI CCWGG 2 cut(s) 942, 960
BstNSI RCATGY 3 cut(s) 241, 1026, 1232
BstSCI CCNGG 2 cut(s) 940, 958
BstSFI CTRYAG 2 cut(s) 316, 801
BstSLI GKGCMC 1 cut(s) 769
BstUI CGCG 1 cut(s) 1243
BstV1I GCAGC 2 cut(s) 24, 1222
BstV2I GAAGAC 2 cut(s) 60, 182
BstX2I RGATCY 2 cut(s) 637, 1034
BstYI RGATCY 2 cut(s) 637, 1034
Bsu36I CCTNAGG 1 cut(s) 1205
BsuI GTATCC 2 cut(s) 174, 958
BsuRI GGCC 4 cut(s) 156, 263, 851, 940
BtsCI GGATG 5 cut(s) 10, 184, 254, 291, 833
BtsIMutI CAGTG 2 cut(s) 111, 1116
CciI TCATGA 2 cut(s) 91, 613
CfoI GCGC 2 cut(s) 1005, 1243
CseI GACGC 2 cut(s) 1202, 1232
Csp6I GTAC 4 cut(s) 231, 760, 918, 1195
CviAII CATG 8 cut(s) 92, 238, 614, 1023, 1130, 1187, 1198, 1229
CviQI GTAC 4 cut(s) 231, 760, 918, 1195
DdeI CTNAG 5 cut(s) 58, 172, 195, 1124, 1205
DpnI GATC 4 cut(s) 9, 639, 888, 1036
DpnII GATC 4 cut(s) 7, 637, 886, 1034
DraI TTTAAA 2 cut(s) 663, 1141
DraIII CACNNNGTG 2 cut(s) 756, 926
EaeI YGGCCR 3 cut(s) 154, 261, 849
Eam1104I CTCTTC 3 cut(s) 43, 114, 198
EarI CTCTTC 3 cut(s) 43, 114, 198
Eco130I CCWWGG 3 cut(s) 68, 852, 913
Eco57I CTGAAG 3 cut(s) 227, 746, 1038
Eco81I CCTNAGG 1 cut(s) 1205
EcoRII CCWGG 2 cut(s) 940, 958
EcoT14I CCWWGG 3 cut(s) 68, 852, 913
ErhI CCWWGG 3 cut(s) 68, 852, 913
FaeI CATG 8 cut(s) 95, 241, 617, 1026, 1133, 1190, 1201, 1232
FaqI GGGAC 2 cut(s) 705, 1033
FatI CATG 8 cut(s) 91, 237, 613, 1022, 1129, 1186, 1197, 1228
FbaI TGATCA 1 cut(s) 886
FblI GTMKAC 1 cut(s) 315
Fnu4HI GCNGC 2 cut(s) 13, 1211
FokI GGATG 5 cut(s) 17, 191, 261, 298, 840
Fsp4HI GCNGC 2 cut(s) 13, 1211
FspBI CTAG 3 cut(s) 69, 84, 743
FspI TGCGCA 1 cut(s) 1004
GlaI GCGC 2 cut(s) 1004, 1242
GluI GCNGC 2 cut(s) 13, 1211
GsaI CCCAGC 1 cut(s) 293
GsuI CTGGAG 2 cut(s) 12, 135
HaeIII GGCC 4 cut(s) 156, 263, 851, 940
HapII CCGG 1 cut(s) 339
HgaI GACGC 2 cut(s) 1202, 1232
HhaI GCGC 2 cut(s) 1005, 1243
Hin1II CATG 8 cut(s) 95, 241, 617, 1026, 1133, 1190, 1201, 1232
Hin6I GCGC 2 cut(s) 1003, 1241
HinP1I GCGC 2 cut(s) 1003, 1241
HincII GTYRAC 1 cut(s) 1071
HindII GTYRAC 1 cut(s) 1071
HindIII AAGCTT 1 cut(s) 524
HinfI GANTC 4 cut(s) 56, 104, 170, 718
HpaII CCGG 1 cut(s) 339
HphI GGTGA 6 cut(s) 305, 376, 431, 491, 686, 1127
Hpy166II GTNNAC 5 cut(s) 270, 316, 472, 920, 1071
Hpy188I TCNGA 5 cut(s) 47, 175, 198, 642, 908
Hpy188III TCNNGA 6 cut(s) 29, 92, 167, 614, 1151, 1217
Hpy8I GTNNAC 5 cut(s) 270, 316, 472, 920, 1071
Hpy99I CGWCG 1 cut(s) 1248
HpyAV CCTTC 7 cut(s) 179, 290, 355, 380, 453, 454, 1182
HpyCH4III ACNGT 3 cut(s) 479, 1111, 1183
HpyCH4V TGCA 3 cut(s) 146, 252, 1186
HpyF10VI GCNNNNNNNGC 2 cut(s) 857, 1183
HpyF3I CTNAG 5 cut(s) 58, 172, 195, 1124, 1205
Hsp92II CATG 8 cut(s) 95, 241, 617, 1026, 1133, 1190, 1201, 1232
HspAI GCGC 2 cut(s) 1003, 1241
Ksp22I TGATCA 1 cut(s) 886
Kzo9I GATC 4 cut(s) 7, 637, 886, 1034
LmnI GCTCC 2 cut(s) 72, 1225
Lsp1109I GCAGC 2 cut(s) 24, 1222
LweI GCATC 3 cut(s) 239, 276, 1108
MaeI CTAG 3 cut(s) 69, 84, 743
MaeIII GTNAC 5 cut(s) 17, 109, 689, 702, 748
MalI GATC 4 cut(s) 9, 639, 888, 1036
MboI GATC 4 cut(s) 7, 637, 886, 1034
MfeI CAATTG 2 cut(s) 619, 807
MflI RGATCY 2 cut(s) 637, 1034
MhlI GDGCHC 1 cut(s) 769
MlsI TGGCCA 2 cut(s) 156, 851
MluCI AATT 6 cut(s) 345, 619, 677, 807, 953, 1010
MluNI TGGCCA 2 cut(s) 156, 851
MlyI GAGTC 4 cut(s) 50, 98, 164, 727
MmeI TCCRAC 3 cut(s) 573, 805, 1041
MnlI CCTC 7 cut(s) 169, 204, 215, 529, 589, 664, 1214
Mox20I TGGCCA 2 cut(s) 156, 851
MroXI GAANNNNTTC 2 cut(s) 189, 468
MscI TGGCCA 2 cut(s) 156, 851
MseI TTAA 8 cut(s) 357, 522, 570, 662, 981, 1082, 1140, 1258
MslI CAYNNNNRTG 1 cut(s) 477
Msp20I TGGCCA 2 cut(s) 156, 851
MspA1I CMGCKG 1 cut(s) 15
MspCI CTTAAG 1 cut(s) 521
MspI CCGG 1 cut(s) 339
MspR9I CCNGG 2 cut(s) 942, 960
MunI CAATTG 2 cut(s) 619, 807
Mva1269I GAATGC 1 cut(s) 148
MvaI CCWGG 2 cut(s) 942, 960
MvnI CGCG 1 cut(s) 1243
MwoI GCNNNNNNNGC 2 cut(s) 857, 1183
NdeII GATC 4 cut(s) 7, 637, 886, 1034
NlaIII CATG 8 cut(s) 95, 241, 617, 1026, 1133, 1190, 1201, 1232
NlaIV GGNNCC 3 cut(s) 216, 768, 1036
NmeAIII GCCGAG 1 cut(s) 289
NmuCI GTSAC 4 cut(s) 109, 689, 702, 748
NsbI TGCGCA 1 cut(s) 1004
NspI RCATGY 3 cut(s) 241, 1026, 1232
OliI CACNNNNGTG 1 cut(s) 477
PagI TCATGA 2 cut(s) 91, 613
PciI ACATGT 1 cut(s) 1022
PcsI WCGNNNNNNNCGW 1 cut(s) 1252
PctI GAATGC 1 cut(s) 148
PdmI GAANNNNTTC 2 cut(s) 189, 468
PflFI GACNNNGTC 1 cut(s) 107
PflMI CCANNNNNTGG 1 cut(s) 35
PkrI GCNGC 2 cut(s) 14, 1212
PleI GAGTC 4 cut(s) 50, 98, 164, 726
PpsI GAGTC 4 cut(s) 50, 98, 164, 726
PscI ACATGT 1 cut(s) 1022
Psp6I CCWGG 2 cut(s) 940, 958
PspFI CCCAGC 1 cut(s) 289
PspGI CCWGG 2 cut(s) 940, 958
PspN4I GGNNCC 3 cut(s) 216, 768, 1036
PsrI GAACNNNNNNTAC 2 cut(s) 901, 933
PsuI RGATCY 2 cut(s) 637, 1034
PsyI GACNNNGTC 1 cut(s) 107
PvuII CAGCTG 1 cut(s) 15
RsaI GTAC 4 cut(s) 232, 761, 919, 1196
RsaNI GTAC 4 cut(s) 231, 760, 918, 1195
RseI CAYNNNNRTG 1 cut(s) 477
SaqAI TTAA 8 cut(s) 357, 522, 570, 662, 981, 1082, 1140, 1258
SatI GCNGC 2 cut(s) 13, 1211
Sau3AI GATC 4 cut(s) 7, 637, 886, 1034
SchI GAGTC 4 cut(s) 50, 98, 164, 727
ScrFI CCNGG 2 cut(s) 942, 960
SduI GDGCHC 1 cut(s) 769
SfaNI GCATC 3 cut(s) 239, 276, 1108
SfcI CTRYAG 2 cut(s) 316, 801
SmiMI CAYNNNNRTG 1 cut(s) 477
SmlI CTYRAG 1 cut(s) 521
SmoI CTYRAG 1 cut(s) 521
Sse9I AATT 6 cut(s) 345, 619, 677, 807, 953, 1010
SsiI CCGC 1 cut(s) 1102
SspI AATATT 1 cut(s) 655
SspMI CTAG 3 cut(s) 69, 84, 743
StyD4I CCNGG 2 cut(s) 940, 958
StyI CCWWGG 3 cut(s) 68, 852, 913
TaaI ACNGT 3 cut(s) 479, 1111, 1183
TasI AATT 6 cut(s) 345, 619, 677, 807, 953, 1010
TatI WGTACW 1 cut(s) 230
Tru1I TTAA 8 cut(s) 357, 522, 570, 662, 981, 1082, 1140, 1258
Tru9I TTAA 8 cut(s) 357, 522, 570, 662, 981, 1082, 1140, 1258
TscAI CASTG 2 cut(s) 118, 1116
TseFI GTSAC 4 cut(s) 109, 689, 702, 748
TseI GCWGC 2 cut(s) 12, 1210
Tsp45I GTSAC 4 cut(s) 109, 689, 702, 748
TspDTI ATGAA 4 cut(s) 108, 198, 399, 602
TspGWI ACGGA 1 cut(s) 548
TspRI CASTG 2 cut(s) 118, 1116
Tth111I GACNNNGTC 1 cut(s) 107
Van91I CCANNNNNTGG 1 cut(s) 35
Vha464I CTTAAG 1 cut(s) 521
XapI RAATTY 1 cut(s) 1010
XceI RCATGY 3 cut(s) 241, 1026, 1232
XmaJI CCTAGG 1 cut(s) 68
XmiI GTMKAC 1 cut(s) 315
XmnI GAANNNNTTC 2 cut(s) 189, 468
XspI CTAG 3 cut(s) 69, 84, 743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.