pycom06g15830

WAT1-related protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
20306676 .. 20309457
2782 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1101 bp
ATGGGGATGAAGTCAAGAATATGGGAGTTGCTGCCGTTCGCGGCGATGGTGATGGTGGAGATTCTGGACGTGGGATTAACCACACTTAGTAAAGCAGCCATGTCCGGAGGAATGAGCCACTTTGTCTTTGTTGTCTACTCCAATGCTCTTGCCACTCTCATCCTCCTCCCTTCTTCTTTCATCATCCACAGAAACAACAGGCCACCACTTACTTTCACCGTCCTCTGTAAATTCTTCCTCCTCAGCCTCGCTGGGATAACAGTGATGCAGAATTGTATATTTACTGGAGTAAGCTACAGCTCCCCCACTCTTGCATCTGCCTTGAGCAACTTGATCCCGGCTTTCACTTTCCTTCTTGCTGTCGTCTTCAGAATGGAGAAGTTAAATTTGAGAAGCTTAAGAAGCCAGATCAAAATTCTGGGCACTCTGGTATCCATCTCAGGAGCATTGATAGTCACTTTCGTTAAAGGTCCTCCAATCGTGTTGTTTCCAATCAAAACTGTTGACTCTTCTCAATTAAACCCATCTGTCTCTGATGTGTTTCCACTGAGTAATTGGGTCACTGGAGCCCTTTTTATCACAACAGCTTGCTTATCTCTTTCGATATGGAACACCGCTCAGGCAGCAGTTCTTAAGGGGTACCCATCGGAGATGACCATAGTCTCCTTCTATTGCTTCTTTGGGACCATTCAATGTGCAATACTTTCTTTCTTTGTAGAAAGGAAAGCAAGTGCCTGGGCACTTAAACTTGATTTGGAGCTCGCAGCGATCGCCTATTCAGCTGTTTTTGGAAGTGTAGTGACATTCTCTACTCAAACATGGTGCATAAGAAAGAAGGGACCTGTATTTGTGGCTATGTTCAAGCCTCTAGGGATTGCCATTGCTGCCTTAATGGGTGCCATCTTCCTTGGTGACACACTCTATACTGGAAGTGTGATTGGGGCAGTGGTAATTGTGGTGGGTTTCTATGGGGTAGTATGGGCGCAATCAAAAGAGCAAAATGGTCCGGACCAAAAGAAAGAGGAAAAGTTTGAAGACTCGCATGAGGCTGATGATCGGCAACAGACGACGCCTCTCCTCAAGACCCACACACATGTATGA

Protein Analysis

367

Amino Acids

39.84

Weight (kDa)

9.08

Isoelectric Point (pI)

27.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 26 - 153 4.3e-11 EamA-like transporter family
EamA PF00892 188 - 326 5e-11 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 639
AccB1I GGYRCC 2 cut(s) 639, 896
AccBSI CCGCTC 1 cut(s) 617
AccI GTMKAC 1 cut(s) 135
AccII CGCG 1 cut(s) 41
AccIII TCCGGA 2 cut(s) 104, 1006
AciI CCGC 2 cut(s) 41, 615
AclWI GGATC 1 cut(s) 328
AcsI RAATTY 3 cut(s) 230, 385, 414
AcuI CTGAAG 1 cut(s) 352
AcyI GRCGYC 1 cut(s) 1070
AfaI GTAC 1 cut(s) 641
AflII CTTAAG 2 cut(s) 397, 632
AflIII ACRYGT 1 cut(s) 1093
AgsI TTSAA 3 cut(s) 692, 862, 1034
AjiI CACGTC 1 cut(s) 70
AjnI CCWGG 1 cut(s) 734
AluBI AGCT 6 cut(s) 294, 300, 396, 587, 760, 782
AluI AGCT 6 cut(s) 294, 300, 396, 587, 760, 782
Alw21I GWGCWC 1 cut(s) 762
Alw26I GTCTC 2 cut(s) 535, 667
AlwI GGATC 1 cut(s) 328
Aor13HI TCCGGA 2 cut(s) 104, 1006
AoxI GGCC 1 cut(s) 200
ApeKI GCWGC 5 cut(s) 31, 95, 623, 764, 884
ApoI RAATTY 3 cut(s) 230, 385, 414
AsiSI GCGATCGC 1 cut(s) 771
Asp718I GGTACC 1 cut(s) 639
AspLEI GCGC 1 cut(s) 985
AspS9I GGNCC 5 cut(s) 470, 684, 839, 1004, 1009
AsuC2I CCSGG 1 cut(s) 338
AsuHPI GGTGA 3 cut(s) 61, 208, 923
AvaII GGWCC 5 cut(s) 470, 684, 839, 1004, 1009
BaeGI GKGCMC 2 cut(s) 425, 742
BaeI ACNNNNGTAYC 2 cut(s) 414, 447
BanI GGYRCC 2 cut(s) 639, 896
BanII GRGCYC 2 cut(s) 571, 762
BbsI GAAGAC 2 cut(s) 358, 1041
Bbv12I GWGCWC 1 cut(s) 762
BbvCI CCTCAGC 1 cut(s) 242
BbvI GCAGC 5 cut(s) 18, 107, 635, 776, 871
BccI CCATC 6 cut(s) 40, 46, 443, 532, 652, 908
BceAI ACGGC 1 cut(s) 19
BciT130I CCWGG 1 cut(s) 736
BciVI GTATCC 1 cut(s) 442
BcnI CCSGG 1 cut(s) 338
BcoDI GTCTC 2 cut(s) 535, 667
BfaI CTAG 1 cut(s) 869
BfmI CTRYAG 1 cut(s) 295
BfrI CTTAAG 2 cut(s) 397, 632
BfuI GTATCC 1 cut(s) 442
BisI GCNGC 6 cut(s) 32, 42, 96, 624, 765, 885
BlsI GCNGC 6 cut(s) 33, 43, 97, 625, 766, 886
Bme1390I CCNGG 2 cut(s) 338, 736
Bme18I GGWCC 5 cut(s) 470, 684, 839, 1004, 1009
BmgBI CACGTC 1 cut(s) 70
BmgT120I GGNCC 5 cut(s) 470, 684, 839, 1004, 1009
BmiI GGNNCC 5 cut(s) 568, 641, 685, 840, 898
BmrFI CCNGG 2 cut(s) 338, 736
BmsI GCATC 2 cut(s) 255, 323
BoxI GACNNNNGTC 1 cut(s) 659
BpiI GAAGAC 2 cut(s) 358, 1041
BpmI CTGGAG 2 cut(s) 306, 585
Bpu10I CCTNAGC 2 cut(s) 242, 618
BpuEI CTTGAG 2 cut(s) 343, 1064
BpuMI CCSGG 1 cut(s) 338
BsaHI GRCGYC 1 cut(s) 1070
BsaJI CCNNGG 2 cut(s) 735, 907
BsaWI WCCGGW 2 cut(s) 104, 1006
Bse1I ACTGG 3 cut(s) 289, 568, 931
Bse3DI GCAATG 1 cut(s) 879
BseAI TCCGGA 2 cut(s) 104, 1006
BseBI CCWGG 1 cut(s) 736
BseDI CCNNGG 2 cut(s) 735, 907
BseGI GGATG 3 cut(s) 12, 159, 183
BseMI GCAATG 1 cut(s) 879
BseMII CTCAG 4 cut(s) 256, 453, 539, 632
BseNI ACTGG 3 cut(s) 289, 568, 931
BseRI GAGGAG 3 cut(s) 155, 230, 1067
BseSI GKGCMC 2 cut(s) 425, 742
BseXI GCAGC 5 cut(s) 18, 107, 635, 776, 871
BseYI CCCAGC 1 cut(s) 251
Bsh1236I CGCG 1 cut(s) 41
Bsh1285I CGRYCG 1 cut(s) 771
BshFI GGCC 1 cut(s) 202
BshNI GGYRCC 2 cut(s) 639, 896
BsiEI CGRYCG 1 cut(s) 771
BsiHKAI GWGCWC 1 cut(s) 762
BsiSI CCGG 3 cut(s) 105, 338, 1007
BslFI GGGAC 2 cut(s) 697, 852
BsmAI GTCTC 2 cut(s) 535, 667
BsmFI GGGAC 2 cut(s) 697, 852
BsnI GGCC 1 cut(s) 202
Bsp1286I GDGCHC 4 cut(s) 425, 571, 742, 762
Bsp13I TCCGGA 2 cut(s) 104, 1006
Bsp143I GATC 4 cut(s) 333, 408, 768, 1054
BspACI CCGC 2 cut(s) 41, 615
BspANI GGCC 1 cut(s) 202
BspCNI CTCAG 4 cut(s) 255, 452, 540, 631
BspEI TCCGGA 2 cut(s) 104, 1006
BspFNI CGCG 1 cut(s) 41
BspLI GGNNCC 5 cut(s) 568, 641, 685, 840, 898
BspPI GGATC 1 cut(s) 328
BspT107I GGYRCC 2 cut(s) 639, 896
BspTI CTTAAG 2 cut(s) 397, 632
BsrBI CCGCTC 1 cut(s) 617
BsrDI GCAATG 1 cut(s) 879
BsrI ACTGG 3 cut(s) 289, 568, 931
BssECI CCNNGG 2 cut(s) 735, 907
BssMI GATC 4 cut(s) 333, 408, 768, 1054
BssNI GRCGYC 1 cut(s) 1070
BssT1I CCWWGG 1 cut(s) 907
Bst2UI CCWGG 1 cut(s) 736
Bst4CI ACNGT 3 cut(s) 220, 262, 502
Bst6I CTCTTC 1 cut(s) 514
BstACI GRCGYC 1 cut(s) 1070
BstAFI CTTAAG 2 cut(s) 397, 632
BstC8I GCNNGC 2 cut(s) 589, 762
BstDEI CTNAG 5 cut(s) 86, 242, 439, 548, 618
BstF5I GGATG 3 cut(s) 12, 159, 183
BstFNI CGCG 1 cut(s) 41
BstHHI GCGC 1 cut(s) 985
BstKTI GATC 4 cut(s) 336, 411, 771, 1057
BstMAI GTCTC 2 cut(s) 535, 667
BstMBI GATC 4 cut(s) 333, 408, 768, 1054
BstMCI CGRYCG 1 cut(s) 771
BstMWI GCNNNNNNNGC 5 cut(s) 402, 623, 770, 779, 884
BstNI CCWGG 1 cut(s) 736
BstNSI RCATGY 1 cut(s) 1097
BstPAI GACNNNNGTC 1 cut(s) 659
BstSCI CCNGG 2 cut(s) 336, 734
BstSFI CTRYAG 1 cut(s) 295
BstSLI GKGCMC 2 cut(s) 425, 742
BstUI CGCG 1 cut(s) 41
BstV1I GCAGC 5 cut(s) 18, 107, 635, 776, 871
BstV2I GAAGAC 2 cut(s) 358, 1041
BsuI GTATCC 1 cut(s) 442
BsuRI GGCC 1 cut(s) 202
BtgZI GCGATG 1 cut(s) 59
BtrI CACGTC 1 cut(s) 70
BtsCI GGATG 3 cut(s) 12, 159, 183
BtsI GCAGTG 1 cut(s) 951
BtsIMutI CAGTG 4 cut(s) 267, 545, 561, 951
Cac8I GCNNGC 2 cut(s) 589, 762
CfoI GCGC 1 cut(s) 985
Cfr13I GGNCC 5 cut(s) 470, 684, 839, 1004, 1009
CseI GACGC 1 cut(s) 1078
Csp6I GTAC 1 cut(s) 640
CviAII CATG 4 cut(s) 100, 819, 1043, 1094
CviQI GTAC 1 cut(s) 640
DdeI CTNAG 5 cut(s) 86, 242, 439, 548, 618
DpnI GATC 4 cut(s) 335, 410, 770, 1056
DpnII GATC 4 cut(s) 333, 408, 768, 1054
Eam1104I CTCTTC 1 cut(s) 514
EarI CTCTTC 1 cut(s) 514
Ecl136II GAGCTC 1 cut(s) 760
Eco130I CCWWGG 1 cut(s) 907
Eco24I GRGCYC 2 cut(s) 571, 762
Eco47I GGWCC 5 cut(s) 470, 684, 839, 1004, 1009
Eco53kI GAGCTC 1 cut(s) 760
Eco57I CTGAAG 1 cut(s) 352
EcoICRI GAGCTC 1 cut(s) 760
EcoO109I RGGNCCY 2 cut(s) 470, 839
EcoRII CCWGG 1 cut(s) 734
EcoT14I CCWWGG 1 cut(s) 907
EcoT38I GRGCYC 2 cut(s) 571, 762
ErhI CCWWGG 1 cut(s) 907
FaeI CATG 4 cut(s) 103, 822, 1046, 1097
FaqI GGGAC 2 cut(s) 697, 852
FatI CATG 4 cut(s) 99, 818, 1042, 1093
FblI GTMKAC 1 cut(s) 135
Fnu4HI GCNGC 6 cut(s) 32, 42, 96, 624, 765, 885
FokI GGATG 3 cut(s) 19, 146, 170
FriOI GRGCYC 2 cut(s) 571, 762
Fsp4HI GCNGC 6 cut(s) 32, 42, 96, 624, 765, 885
FspBI CTAG 1 cut(s) 869
GlaI GCGC 1 cut(s) 984
GluI GCNGC 6 cut(s) 32, 42, 96, 624, 765, 885
GsaI CCCAGC 1 cut(s) 255
GsuI CTGGAG 2 cut(s) 306, 585
HaeIII GGCC 1 cut(s) 202
HapII CCGG 3 cut(s) 105, 338, 1007
HgaI GACGC 1 cut(s) 1078
HhaI GCGC 1 cut(s) 985
Hin1I GRCGYC 1 cut(s) 1070
Hin1II CATG 4 cut(s) 103, 822, 1046, 1097
Hin6I GCGC 1 cut(s) 983
HinP1I GCGC 1 cut(s) 983
HincII GTYRAC 1 cut(s) 505
HindII GTYRAC 1 cut(s) 505
HindIII AAGCTT 1 cut(s) 394
HinfI GANTC 3 cut(s) 61, 506, 1037
HpaII CCGG 3 cut(s) 105, 338, 1007
HphI GGTGA 3 cut(s) 61, 208, 923
Hpy166II GTNNAC 2 cut(s) 136, 505
Hpy188I TCNGA 3 cut(s) 371, 535, 649
Hpy188III TCNNGA 6 cut(s) 15, 65, 105, 441, 1007, 1081
Hpy8I GTNNAC 2 cut(s) 136, 505
Hpy99I CGWCG 1 cut(s) 1072
HpyAV CCTTC 4 cut(s) 180, 362, 676, 829
HpyCH4III ACNGT 3 cut(s) 220, 262, 502
HpyCH4IV ACGT 1 cut(s) 69
HpyCH4V TGCA 4 cut(s) 268, 314, 698, 825
HpyF10VI GCNNNNNNNGC 5 cut(s) 402, 623, 770, 779, 884
HpyF3I CTNAG 5 cut(s) 86, 242, 439, 548, 618
HpySE526I ACGT 1 cut(s) 69
Hsp92I GRCGYC 1 cut(s) 1070
Hsp92II CATG 4 cut(s) 103, 822, 1046, 1097
HspAI GCGC 1 cut(s) 983
Kpn2I TCCGGA 2 cut(s) 104, 1006
KpnI GGTACC 1 cut(s) 643
Kzo9I GATC 4 cut(s) 333, 408, 768, 1054
LmnI GCTCC 4 cut(s) 305, 443, 566, 757
Lsp1109I GCAGC 5 cut(s) 18, 107, 635, 776, 871
LweI GCATC 2 cut(s) 255, 323
MaeI CTAG 1 cut(s) 869
MaeII ACGT 1 cut(s) 69
MaeIII GTNAC 4 cut(s) 454, 559, 799, 911
MalI GATC 4 cut(s) 335, 410, 770, 1056
MbiI CCGCTC 1 cut(s) 617
MboI GATC 4 cut(s) 333, 408, 768, 1054
MboII GAAGA 6 cut(s) 165, 226, 358, 501, 895, 1046
MhlI GDGCHC 4 cut(s) 425, 571, 742, 762
MluCI AATT 7 cut(s) 230, 271, 385, 414, 515, 553, 951
MlyI GAGTC 2 cut(s) 500, 1031
MroI TCCGGA 2 cut(s) 104, 1006
MseI TTAA 8 cut(s) 77, 383, 398, 465, 518, 633, 744, 890
MslI CAYNNNNRTG 2 cut(s) 1092, 1096
MspA1I CMGCKG 1 cut(s) 782
MspCI CTTAAG 2 cut(s) 397, 632
MspI CCGG 3 cut(s) 105, 338, 1007
MspR9I CCNGG 2 cut(s) 338, 736
MvaI CCWGG 1 cut(s) 736
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 5 cut(s) 402, 623, 770, 779, 884
NciI CCSGG 1 cut(s) 338
NdeII GATC 4 cut(s) 333, 408, 768, 1054
NlaIII CATG 4 cut(s) 103, 822, 1046, 1097
NlaIV GGNNCC 5 cut(s) 568, 641, 685, 840, 898
NmuCI GTSAC 4 cut(s) 454, 559, 799, 911
NspI RCATGY 1 cut(s) 1097
PciI ACATGT 1 cut(s) 1093
PfeI GAWTC 1 cut(s) 61
PkrI GCNGC 6 cut(s) 33, 43, 97, 625, 766, 886
Ple19I CGATCG 1 cut(s) 771
PleI GAGTC 2 cut(s) 500, 1031
PpsI GAGTC 2 cut(s) 500, 1031
PpuMI RGGWCCY 2 cut(s) 470, 839
PscI ACATGT 1 cut(s) 1093
PshAI GACNNNNGTC 1 cut(s) 659
Psp124BI GAGCTC 1 cut(s) 762
Psp5II RGGWCCY 2 cut(s) 470, 839
Psp6I CCWGG 1 cut(s) 734
PspFI CCCAGC 1 cut(s) 251
PspGI CCWGG 1 cut(s) 734
PspN4I GGNNCC 5 cut(s) 568, 641, 685, 840, 898
PspPI GGNCC 5 cut(s) 470, 684, 839, 1004, 1009
PspPPI RGGWCCY 2 cut(s) 470, 839
PvuI CGATCG 1 cut(s) 771
PvuII CAGCTG 1 cut(s) 782
RgaI GCGATCGC 1 cut(s) 771
RsaI GTAC 1 cut(s) 641
RsaNI GTAC 1 cut(s) 640
RseI CAYNNNNRTG 2 cut(s) 1092, 1096
SacI GAGCTC 1 cut(s) 762
SaqAI TTAA 8 cut(s) 77, 383, 398, 465, 518, 633, 744, 890
SatI GCNGC 6 cut(s) 32, 42, 96, 624, 765, 885
Sau3AI GATC 4 cut(s) 333, 408, 768, 1054
Sau96I GGNCC 5 cut(s) 470, 684, 839, 1004, 1009
SchI GAGTC 2 cut(s) 500, 1031
ScrFI CCNGG 2 cut(s) 338, 736
SduI GDGCHC 4 cut(s) 425, 571, 742, 762
SetI ASST 9 cut(s) 72, 296, 302, 398, 472, 589, 762, 784, 844
SfaAI GCGATCGC 1 cut(s) 771
SfaNI GCATC 2 cut(s) 255, 323
SfcI CTRYAG 1 cut(s) 295
SgfI GCGATCGC 1 cut(s) 771
SinI GGWCC 5 cut(s) 470, 684, 839, 1004, 1009
SmiMI CAYNNNNRTG 2 cut(s) 1092, 1096
SmlI CTYRAG 4 cut(s) 322, 397, 632, 1079
SmoI CTYRAG 4 cut(s) 322, 397, 632, 1079
Sse9I AATT 7 cut(s) 230, 271, 385, 414, 515, 553, 951
SsiI CCGC 2 cut(s) 41, 615
SspMI CTAG 1 cut(s) 869
SstI GAGCTC 1 cut(s) 762
StyD4I CCNGG 2 cut(s) 336, 734
StyI CCWWGG 1 cut(s) 907
TaaI ACNGT 3 cut(s) 220, 262, 502
TaiI ACGT 1 cut(s) 72
TaqI TCGA 1 cut(s) 602
TasI AATT 7 cut(s) 230, 271, 385, 414, 515, 553, 951
TauI GCSGC 1 cut(s) 44
TfiI GAWTC 1 cut(s) 61
Tru1I TTAA 8 cut(s) 77, 383, 398, 465, 518, 633, 744, 890
Tru9I TTAA 8 cut(s) 77, 383, 398, 465, 518, 633, 744, 890
TscAI CASTG 4 cut(s) 267, 552, 568, 951
TseFI GTSAC 4 cut(s) 454, 559, 799, 911
TseI GCWGC 5 cut(s) 31, 95, 623, 764, 884
Tsp45I GTSAC 4 cut(s) 454, 559, 799, 911
TspDTI ATGAA 2 cut(s) 23, 169
TspRI CASTG 4 cut(s) 267, 552, 568, 951
Vha464I CTTAAG 2 cut(s) 397, 632
VpaK11BI GGWCC 5 cut(s) 470, 684, 839, 1004, 1009
XapI RAATTY 3 cut(s) 230, 385, 414
XceI RCATGY 1 cut(s) 1097
XcmI CCANNNNNNNNNTGG 1 cut(s) 552
XmiI GTMKAC 1 cut(s) 135
XspI CTAG 1 cut(s) 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.