Pentatricopeptide repeat-containing protein At1g73400
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73400 |
| fragaria_vesca | FvH4_5g17981 |
| malus_domestica | MD14G1242500.v1.1 |
| prunus_persica | Prupe.5G240200_v2.0.a1 |
| pyrus_communis | pycom06g21040 pycom06g21050 |
| rosa_chinensis | RchiOBHm_Chr7g0177611 RchiOBHm_Chr7g0224181 |
| rosa_laevigata | RLG00000005521 |
| rosa_multiflora | Rmu_ssc0000330.1_g000014 |
| rosa_rugosa | Rorug06G0407800 |
| rosa_samantha | Rh7AG007100 Rh7BG007100 Rh7CG007600 Rh7DG007200 Rh7DG007300 |
| rosa_wichuraiana | Rw7G000610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 312 |
| Acc16I | TGCGCA | 1 cut(s) | 397 |
| AclWI | GGATC | 2 cut(s) | 341, 519 |
| AcoI | YGGCCR | 1 cut(s) | 129 |
| AcsI | RAATTY | 1 cut(s) | 29 |
| AgsI | TTSAA | 4 cut(s) | 29, 118, 327, 562 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 110, 142 |
| AluBI | AGCT | 3 cut(s) | 17, 111, 597 |
| AluI | AGCT | 3 cut(s) | 17, 111, 597 |
| Alw26I | GTCTC | 1 cut(s) | 359 |
| AlwI | GGATC | 2 cut(s) | 341, 519 |
| AoxI | GGCC | 1 cut(s) | 129 |
| ApeKI | GCWGC | 2 cut(s) | 14, 393 |
| ApoI | RAATTY | 1 cut(s) | 29 |
| AspLEI | GCGC | 1 cut(s) | 398 |
| AspS9I | GGNCC | 1 cut(s) | 223 |
| AsuC2I | CCSGG | 1 cut(s) | 133 |
| AvaII | GGWCC | 1 cut(s) | 223 |
| BbsI | GAAGAC | 1 cut(s) | 459 |
| BbvI | GCAGC | 2 cut(s) | 26, 380 |
| BccI | CCATC | 5 cut(s) | 163, 275, 347, 373, 502 |
| BcnI | CCSGG | 1 cut(s) | 133 |
| BcoDI | GTCTC | 1 cut(s) | 359 |
| BfaI | CTAG | 1 cut(s) | 297 |
| BisI | GCNGC | 2 cut(s) | 15, 394 |
| BlsI | GCNGC | 2 cut(s) | 16, 395 |
| Bme1390I | CCNGG | 1 cut(s) | 133 |
| Bme18I | GGWCC | 1 cut(s) | 223 |
| BmgT120I | GGNCC | 1 cut(s) | 223 |
| BmiI | GGNNCC | 1 cut(s) | 225 |
| BmrFI | CCNGG | 1 cut(s) | 133 |
| BmsI | GCATC | 1 cut(s) | 424 |
| BpiI | GAAGAC | 1 cut(s) | 459 |
| BpuEI | CTTGAG | 1 cut(s) | 203 |
| BpuMI | CCSGG | 1 cut(s) | 133 |
| Bsa29I | ATCGAT | 1 cut(s) | 345 |
| BseCI | ATCGAT | 1 cut(s) | 345 |
| BseGI | GGATG | 2 cut(s) | 128, 279 |
| BseXI | GCAGC | 2 cut(s) | 26, 380 |
| BsgI | GTGCAG | 1 cut(s) | 323 |
| BshFI | GGCC | 1 cut(s) | 131 |
| BshVI | ATCGAT | 1 cut(s) | 345 |
| BsiSI | CCGG | 1 cut(s) | 132 |
| BslFI | GGGAC | 1 cut(s) | 209 |
| BsmAI | GTCTC | 1 cut(s) | 359 |
| BsmFI | GGGAC | 1 cut(s) | 209 |
| BsnI | GGCC | 1 cut(s) | 131 |
| Bsp143I | GATC | 3 cut(s) | 342, 346, 511 |
| BspANI | GGCC | 1 cut(s) | 131 |
| BspDI | ATCGAT | 1 cut(s) | 345 |
| BspLI | GGNNCC | 1 cut(s) | 225 |
| BspPI | GGATC | 2 cut(s) | 341, 519 |
| BspQI | GCTCTTC | 1 cut(s) | 569 |
| BssMI | GATC | 3 cut(s) | 342, 346, 511 |
| Bst4CI | ACNGT | 1 cut(s) | 212 |
| Bst6I | CTCTTC | 1 cut(s) | 569 |
| BstDEI | CTNAG | 2 cut(s) | 9, 257 |
| BstEII | GGTNACC | 1 cut(s) | 182 |
| BstF5I | GGATG | 2 cut(s) | 128, 279 |
| BstHHI | GCGC | 1 cut(s) | 398 |
| BstKTI | GATC | 3 cut(s) | 345, 349, 514 |
| BstMAI | GTCTC | 1 cut(s) | 359 |
| BstMBI | GATC | 3 cut(s) | 342, 346, 511 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 301 |
| BstNSI | RCATGY | 2 cut(s) | 319, 441 |
| BstPI | GGTNACC | 1 cut(s) | 182 |
| BstSCI | CCNGG | 1 cut(s) | 131 |
| BstV1I | GCAGC | 2 cut(s) | 26, 380 |
| BstV2I | GAAGAC | 1 cut(s) | 459 |
| Bsu15I | ATCGAT | 1 cut(s) | 345 |
| BsuRI | GGCC | 1 cut(s) | 131 |
| BsuTUI | ATCGAT | 1 cut(s) | 345 |
| BtsCI | GGATG | 2 cut(s) | 128, 279 |
| CfoI | GCGC | 1 cut(s) | 398 |
| Cfr13I | GGNCC | 1 cut(s) | 223 |
| ClaI | ATCGAT | 1 cut(s) | 345 |
| CviAII | CATG | 5 cut(s) | 34, 316, 374, 438, 580 |
| CviJI | RGCY | 9 cut(s) | 17, 98, 111, 131, 149, 262, 393, 409, 597 |
| CviKI_1 | RGCY | 9 cut(s) | 17, 98, 111, 131, 149, 262, 393, 409, 597 |
| DdeI | CTNAG | 2 cut(s) | 9, 257 |
| DpnI | GATC | 3 cut(s) | 344, 348, 513 |
| DpnII | GATC | 3 cut(s) | 342, 346, 511 |
| EaeI | YGGCCR | 1 cut(s) | 129 |
| Eam1104I | CTCTTC | 1 cut(s) | 569 |
| EarI | CTCTTC | 1 cut(s) | 569 |
| Eco47I | GGWCC | 1 cut(s) | 223 |
| Eco91I | GGTNACC | 1 cut(s) | 182 |
| EcoO109I | RGGNCCY | 1 cut(s) | 223 |
| EcoO65I | GGTNACC | 1 cut(s) | 182 |
| EcoRI | GAATTC | 1 cut(s) | 29 |
| EcoT22I | ATGCAT | 1 cut(s) | 439 |
| FaeI | CATG | 5 cut(s) | 37, 319, 377, 441, 583 |
| FaqI | GGGAC | 1 cut(s) | 209 |
| FatI | CATG | 5 cut(s) | 33, 315, 373, 437, 579 |
| Fnu4HI | GCNGC | 2 cut(s) | 15, 394 |
| FokI | GGATG | 2 cut(s) | 135, 286 |
| Fsp4HI | GCNGC | 2 cut(s) | 15, 394 |
| FspBI | CTAG | 1 cut(s) | 297 |
| FspI | TGCGCA | 1 cut(s) | 397 |
| GlaI | GCGC | 1 cut(s) | 397 |
| GluI | GCNGC | 2 cut(s) | 15, 394 |
| HaeIII | GGCC | 1 cut(s) | 131 |
| HapII | CCGG | 1 cut(s) | 132 |
| HhaI | GCGC | 1 cut(s) | 398 |
| Hin1II | CATG | 5 cut(s) | 37, 319, 377, 441, 583 |
| Hin6I | GCGC | 1 cut(s) | 396 |
| HinP1I | GCGC | 1 cut(s) | 396 |
| HinfI | GANTC | 1 cut(s) | 497 |
| HpaII | CCGG | 1 cut(s) | 132 |
| Hpy166II | GTNNAC | 1 cut(s) | 463 |
| Hpy188I | TCNGA | 2 cut(s) | 10, 507 |
| Hpy188III | TCNNGA | 3 cut(s) | 106, 191, 350 |
| Hpy8I | GTNNAC | 1 cut(s) | 463 |
| HpyAV | CCTTC | 5 cut(s) | 112, 130, 264, 398, 546 |
| HpyCH4III | ACNGT | 1 cut(s) | 212 |
| HpyCH4IV | ACGT | 2 cut(s) | 456, 550 |
| HpyCH4V | TGCA | 6 cut(s) | 83, 163, 304, 420, 437, 557 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 301 |
| HpyF3I | CTNAG | 2 cut(s) | 9, 257 |
| HpySE526I | ACGT | 2 cut(s) | 456, 550 |
| Hsp92II | CATG | 5 cut(s) | 37, 319, 377, 441, 583 |
| HspAI | GCGC | 1 cut(s) | 396 |
| Kzo9I | GATC | 3 cut(s) | 342, 346, 511 |
| LguI | GCTCTTC | 1 cut(s) | 569 |
| LmnI | GCTCC | 1 cut(s) | 356 |
| LpnPI | CCDG | 6 cut(s) | 119, 145, 204, 363, 386, 578 |
| Lsp1109I | GCAGC | 2 cut(s) | 26, 380 |
| LweI | GCATC | 1 cut(s) | 424 |
| MaeI | CTAG | 1 cut(s) | 297 |
| MaeII | ACGT | 2 cut(s) | 456, 550 |
| MaeIII | GTNAC | 3 cut(s) | 182, 199, 230 |
| MalI | GATC | 3 cut(s) | 344, 348, 513 |
| MboI | GATC | 3 cut(s) | 342, 346, 511 |
| MboII | GAAGA | 4 cut(s) | 51, 443, 464, 586 |
| MluCI | AATT | 3 cut(s) | 29, 84, 476 |
| MnlI | CCTC | 5 cut(s) | 4, 139, 198, 278, 381 |
| Mph1103I | ATGCAT | 1 cut(s) | 439 |
| MspI | CCGG | 1 cut(s) | 132 |
| MspR9I | CCNGG | 1 cut(s) | 133 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 301 |
| NciI | CCSGG | 1 cut(s) | 133 |
| NdeII | GATC | 3 cut(s) | 342, 346, 511 |
| NlaIII | CATG | 5 cut(s) | 37, 319, 377, 441, 583 |
| NlaIV | GGNNCC | 1 cut(s) | 225 |
| NsbI | TGCGCA | 1 cut(s) | 397 |
| NsiI | ATGCAT | 1 cut(s) | 439 |
| NspI | RCATGY | 2 cut(s) | 319, 441 |
| PciSI | GCTCTTC | 1 cut(s) | 569 |
| PfeI | GAWTC | 1 cut(s) | 497 |
| PkrI | GCNGC | 2 cut(s) | 16, 395 |
| PpuMI | RGGWCCY | 1 cut(s) | 223 |
| PsiI | TTATAA | 1 cut(s) | 312 |
| Psp5II | RGGWCCY | 1 cut(s) | 223 |
| PspEI | GGTNACC | 1 cut(s) | 182 |
| PspN4I | GGNNCC | 1 cut(s) | 225 |
| PspPI | GGNCC | 1 cut(s) | 223 |
| PspPPI | RGGWCCY | 1 cut(s) | 223 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 167, 199 |
| SapI | GCTCTTC | 1 cut(s) | 569 |
| SatI | GCNGC | 2 cut(s) | 15, 394 |
| Sau3AI | GATC | 3 cut(s) | 342, 346, 511 |
| Sau96I | GGNCC | 1 cut(s) | 223 |
| ScrFI | CCNGG | 1 cut(s) | 133 |
| SfaNI | GCATC | 1 cut(s) | 424 |
| SinI | GGWCC | 1 cut(s) | 223 |
| SmlI | CTYRAG | 2 cut(s) | 18, 218 |
| SmoI | CTYRAG | 2 cut(s) | 18, 218 |
| Sse9I | AATT | 3 cut(s) | 29, 84, 476 |
| SspMI | CTAG | 1 cut(s) | 297 |
| StyD4I | CCNGG | 1 cut(s) | 131 |
| TaaI | ACNGT | 1 cut(s) | 212 |
| TaiI | ACGT | 2 cut(s) | 459, 553 |
| TaqI | TCGA | 1 cut(s) | 345 |
| TasI | AATT | 3 cut(s) | 29, 84, 476 |
| TfiI | GAWTC | 1 cut(s) | 497 |
| TseI | GCWGC | 2 cut(s) | 14, 393 |
| TspDTI | ATGAA | 3 cut(s) | 22, 264, 488 |
| TspGWI | ACGGA | 2 cut(s) | 282, 586 |
| VpaK11BI | GGWCC | 1 cut(s) | 223 |
| XapI | RAATTY | 1 cut(s) | 29 |
| XceI | RCATGY | 2 cut(s) | 319, 441 |
| XspI | CTAG | 1 cut(s) | 297 |
| Zsp2I | ATGCAT | 1 cut(s) | 439 |