Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73400 |
| fragaria_vesca | FvH4_5g17981 |
| malus_domestica | MD14G1242500.v1.1 |
| prunus_persica | Prupe.5G240200_v2.0.a1 |
| pyrus_communis | pycom06g21040 pycom06g21050 |
| rosa_chinensis | RchiOBHm_Chr7g0177611 RchiOBHm_Chr7g0224181 |
| rosa_laevigata | RLG00000005521 |
| rosa_multiflora | Rmu_ssc0000330.1_g000014 |
| rosa_rugosa | Rorug06G0407800 |
| rosa_samantha | Rh7AG007100 Rh7BG007100 Rh7CG007600 Rh7DG007200 Rh7DG007300 |
| rosa_wichuraiana | Rw7G000610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 251 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 153 |
| AgsI | TTSAA | 2 cut(s) | 44, 211 |
| AjnI | CCWGG | 2 cut(s) | 122, 239 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 21, 53 |
| AleI | CACNNNNGTG | 1 cut(s) | 295 |
| AluBI | AGCT | 2 cut(s) | 57, 71 |
| AluI | AGCT | 2 cut(s) | 57, 71 |
| AlwI | GGATC | 1 cut(s) | 251 |
| ApeKI | GCWGC | 1 cut(s) | 68 |
| AspS9I | GGNCC | 1 cut(s) | 120 |
| AvaII | GGWCC | 1 cut(s) | 120 |
| BanII | GRGCYC | 1 cut(s) | 240 |
| BbvI | GCAGC | 1 cut(s) | 80 |
| BccI | CCATC | 1 cut(s) | 259 |
| BciT130I | CCWGG | 2 cut(s) | 124, 241 |
| BclI | TGATCA | 2 cut(s) | 48, 190 |
| BfaI | CTAG | 1 cut(s) | 72 |
| BisI | GCNGC | 1 cut(s) | 69 |
| BlsI | GCNGC | 1 cut(s) | 70 |
| Bme1390I | CCNGG | 2 cut(s) | 124, 241 |
| Bme18I | GGWCC | 1 cut(s) | 120 |
| BmgT120I | GGNCC | 1 cut(s) | 120 |
| BmiI | GGNNCC | 1 cut(s) | 121 |
| BmrFI | CCNGG | 2 cut(s) | 124, 241 |
| BsaJI | CCNNGG | 2 cut(s) | 123, 239 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 153 |
| BseBI | CCWGG | 2 cut(s) | 124, 241 |
| BseDI | CCNNGG | 2 cut(s) | 123, 239 |
| BseGI | GGATG | 1 cut(s) | 236 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BseXI | GCAGC | 1 cut(s) | 80 |
| BslFI | GGGAC | 1 cut(s) | 282 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BsmFI | GGGAC | 1 cut(s) | 282 |
| Bsp1286I | GDGCHC | 1 cut(s) | 240 |
| Bsp143I | GATC | 3 cut(s) | 48, 190, 243 |
| BspLI | GGNNCC | 1 cut(s) | 121 |
| BspPI | GGATC | 1 cut(s) | 251 |
| BssECI | CCNNGG | 2 cut(s) | 123, 239 |
| BssMI | GATC | 3 cut(s) | 48, 190, 243 |
| Bst2UI | CCWGG | 2 cut(s) | 124, 241 |
| Bst4CI | ACNGT | 1 cut(s) | 297 |
| BstF5I | GGATG | 1 cut(s) | 236 |
| BstKTI | GATC | 3 cut(s) | 51, 193, 246 |
| BstMBI | GATC | 3 cut(s) | 48, 190, 243 |
| BstNI | CCWGG | 2 cut(s) | 124, 241 |
| BstSCI | CCNGG | 2 cut(s) | 122, 239 |
| BstV1I | GCAGC | 1 cut(s) | 80 |
| BtsCI | GGATG | 1 cut(s) | 236 |
| Cfr13I | GGNCC | 1 cut(s) | 120 |
| CviAII | CATG | 1 cut(s) | 194 |
| CviJI | RGCY | 5 cut(s) | 20, 57, 71, 146, 238 |
| CviKI_1 | RGCY | 5 cut(s) | 20, 57, 71, 146, 238 |
| DpnI | GATC | 3 cut(s) | 50, 192, 245 |
| DpnII | GATC | 3 cut(s) | 48, 190, 243 |
| Eco24I | GRGCYC | 1 cut(s) | 240 |
| Eco47I | GGWCC | 1 cut(s) | 120 |
| EcoRII | CCWGG | 2 cut(s) | 122, 239 |
| EcoT38I | GRGCYC | 1 cut(s) | 240 |
| FaeI | CATG | 1 cut(s) | 197 |
| FaiI | YATR | 4 cut(s) | 35, 195, 255, 279 |
| FaqI | GGGAC | 1 cut(s) | 282 |
| FatI | CATG | 1 cut(s) | 193 |
| FbaI | TGATCA | 2 cut(s) | 48, 190 |
| Fnu4HI | GCNGC | 1 cut(s) | 69 |
| FokI | GGATG | 1 cut(s) | 243 |
| FriOI | GRGCYC | 1 cut(s) | 240 |
| Fsp4HI | GCNGC | 1 cut(s) | 69 |
| FspBI | CTAG | 1 cut(s) | 72 |
| GluI | GCNGC | 1 cut(s) | 69 |
| Hin1II | CATG | 1 cut(s) | 197 |
| Hpy188III | TCNNGA | 5 cut(s) | 41, 52, 134, 211, 247 |
| HpyCH4III | ACNGT | 1 cut(s) | 297 |
| Hsp92II | CATG | 1 cut(s) | 197 |
| Ksp22I | TGATCA | 2 cut(s) | 48, 190 |
| Kzo9I | GATC | 3 cut(s) | 48, 190, 243 |
| LmnI | GCTCC | 1 cut(s) | 54 |
| LpnPI | CCDG | 7 cut(s) | 37, 102, 109, 136, 209, 226, 253 |
| Lsp1109I | GCAGC | 1 cut(s) | 80 |
| MaeI | CTAG | 1 cut(s) | 72 |
| MaeIII | GTNAC | 1 cut(s) | 288 |
| MalI | GATC | 3 cut(s) | 50, 192, 245 |
| MboI | GATC | 3 cut(s) | 48, 190, 243 |
| MboII | GAAGA | 1 cut(s) | 175 |
| MfeI | CAATTG | 1 cut(s) | 272 |
| MhlI | GDGCHC | 1 cut(s) | 240 |
| MluCI | AATT | 2 cut(s) | 44, 272 |
| MnlI | CCTC | 2 cut(s) | 76, 177 |
| MslI | CAYNNNNRTG | 1 cut(s) | 295 |
| MspR9I | CCNGG | 2 cut(s) | 124, 241 |
| MunI | CAATTG | 1 cut(s) | 272 |
| MvaI | CCWGG | 2 cut(s) | 124, 241 |
| NdeII | GATC | 3 cut(s) | 48, 190, 243 |
| NlaIII | CATG | 1 cut(s) | 197 |
| NlaIV | GGNNCC | 1 cut(s) | 121 |
| NmuCI | GTSAC | 1 cut(s) | 288 |
| OliI | CACNNNNGTG | 1 cut(s) | 295 |
| PkrI | GCNGC | 1 cut(s) | 70 |
| Psp6I | CCWGG | 2 cut(s) | 122, 239 |
| PspGI | CCWGG | 2 cut(s) | 122, 239 |
| PspN4I | GGNNCC | 1 cut(s) | 121 |
| PspPI | GGNCC | 1 cut(s) | 120 |
| RseI | CAYNNNNRTG | 1 cut(s) | 295 |
| SatI | GCNGC | 1 cut(s) | 69 |
| Sau3AI | GATC | 3 cut(s) | 48, 190, 243 |
| Sau96I | GGNCC | 1 cut(s) | 120 |
| ScrFI | CCNGG | 2 cut(s) | 124, 241 |
| SduI | GDGCHC | 1 cut(s) | 240 |
| SetI | ASST | 2 cut(s) | 59, 73 |
| SinI | GGWCC | 1 cut(s) | 120 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 295 |
| Sse9I | AATT | 2 cut(s) | 44, 272 |
| SspMI | CTAG | 1 cut(s) | 72 |
| StyD4I | CCNGG | 2 cut(s) | 122, 239 |
| TaaI | ACNGT | 1 cut(s) | 297 |
| TasI | AATT | 2 cut(s) | 44, 272 |
| TseFI | GTSAC | 1 cut(s) | 288 |
| TseI | GCWGC | 1 cut(s) | 68 |
| Tsp45I | GTSAC | 1 cut(s) | 288 |
| TspDTI | ATGAA | 4 cut(s) | 105, 122, 189, 233 |
| VpaK11BI | GGWCC | 1 cut(s) | 120 |
| XspI | CTAG | 1 cut(s) | 72 |