ubiquitin protein ligase activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g05930 FvH4_7g05930 FvH4_7g05930 |
| malus_domestica | MD07G1068200.v1.1 |
| prunus_persica | Prupe.2G085600_v2.0.a1 |
| pyrus_communis | pycom07g05230 |
| rosa_chinensis | RchiOBHm_Chr1g0333131 |
| rosa_laevigata | RLG00000029624 |
| rosa_multiflora | Rmu_sc0007432.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00317770 |
| rosa_rugosa | Rorug01G0107300 Rorug01G0107400 |
| rosa_samantha | Rh1AG130600 Rh1BG099700 Rh1CG124400 Rh1DG135900 |
| rosa_wichuraiana | Rw1G010240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1013 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1823, 2473 |
| AccI | GTMKAC | 3 cut(s) | 739, 1057, 1779 |
| AccIII | TCCGGA | 1 cut(s) | 2903 |
| AciI | CCGC | 4 cut(s) | 654, 1218, 2197, 3149 |
| AclWI | GGATC | 2 cut(s) | 1602, 1854 |
| AcoI | YGGCCR | 4 cut(s) | 156, 1047, 1814, 2824 |
| AcsI | RAATTY | 5 cut(s) | 609, 776, 1114, 2026, 2966 |
| AcuI | CTGAAG | 2 cut(s) | 1445, 2280 |
| AcvI | CACGTG | 1 cut(s) | 1277 |
| AdeI | CACNNNGTG | 1 cut(s) | 1573 |
| AfaI | GTAC | 4 cut(s) | 14, 1687, 1724, 2878 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 225, 1405, 1823, 2473, 3133 |
| AflII | CTTAAG | 2 cut(s) | 880, 3226 |
| AflIII | ACRYGT | 2 cut(s) | 2435, 2879 |
| AjiI | CACGTC | 1 cut(s) | 1894 |
| AjnI | CCWGG | 4 cut(s) | 171, 275, 377, 1913 |
| AleI | CACNNNNGTG | 2 cut(s) | 30, 1665 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 98, 130 |
| Alw21I | GWGCWC | 2 cut(s) | 1510, 3216 |
| Alw26I | GTCTC | 1 cut(s) | 629 |
| AlwI | GGATC | 2 cut(s) | 1602, 1854 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1889 |
| Ama87I | CYCGRG | 3 cut(s) | 524, 1554, 2289 |
| Aor13HI | TCCGGA | 1 cut(s) | 2903 |
| AoxI | GGCC | 7 cut(s) | 156, 531, 1047, 1389, 1814, 2665, 2824 |
| ApoI | RAATTY | 5 cut(s) | 609, 776, 1114, 2026, 2966 |
| AseI | ATTAAT | 1 cut(s) | 941 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3034 |
| AspLEI | GCGC | 3 cut(s) | 690, 1224, 2511 |
| AspS9I | GGNCC | 3 cut(s) | 169, 856, 2665 |
| AsuC2I | CCSGG | 1 cut(s) | 2741 |
| AsuHPI | GGTGA | 7 cut(s) | 44, 1340, 1709, 1987, 2330, 2331, 2963 |
| AsuNHI | GCTAGC | 1 cut(s) | 1178 |
| AvaI | CYCGRG | 3 cut(s) | 524, 1554, 2289 |
| AvaII | GGWCC | 2 cut(s) | 169, 856 |
| BalI | TGGCCA | 4 cut(s) | 158, 1049, 1816, 2826 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 1510 |
| BauI | CACGAG | 1 cut(s) | 1689 |
| BbrPI | CACGTG | 1 cut(s) | 1277 |
| BbsI | GAAGAC | 4 cut(s) | 169, 1628, 2925, 3005 |
| Bbv12I | GWGCWC | 2 cut(s) | 1510, 3216 |
| BbvCI | CCTCAGC | 1 cut(s) | 1521 |
| BccI | CCATC | 5 cut(s) | 376, 958, 2260, 2606, 2777 |
| BceAI | ACGGC | 2 cut(s) | 1383, 2637 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2189, 2223 |
| BciT130I | CCWGG | 4 cut(s) | 173, 277, 379, 1915 |
| BciVI | GTATCC | 3 cut(s) | 660, 1548, 2102 |
| BcnI | CCSGG | 1 cut(s) | 2741 |
| BcoDI | GTCTC | 1 cut(s) | 629 |
| BfaI | CTAG | 5 cut(s) | 75, 1179, 2256, 3102, 3194 |
| BfmI | CTRYAG | 2 cut(s) | 1881, 2872 |
| BfoI | RGCGCY | 1 cut(s) | 1225 |
| BfrI | CTTAAG | 2 cut(s) | 880, 3226 |
| BfuAI | ACCTGC | 1 cut(s) | 1013 |
| BfuI | GTATCC | 3 cut(s) | 660, 1548, 2102 |
| BglII | AGATCT | 1 cut(s) | 1161 |
| Bme1390I | CCNGG | 5 cut(s) | 173, 277, 379, 1915, 2741 |
| Bme18I | GGWCC | 2 cut(s) | 169, 856 |
| BmeT110I | CYCGRG | 3 cut(s) | 524, 1554, 2289 |
| BmgBI | CACGTC | 1 cut(s) | 1894 |
| BmgT120I | GGNCC | 3 cut(s) | 169, 856, 2665 |
| BmiI | GGNNCC | 2 cut(s) | 6, 3179 |
| BmrFI | CCNGG | 5 cut(s) | 173, 277, 379, 1915, 2741 |
| BmrI | ACTGGG | 1 cut(s) | 1883 |
| BmtI | GCTAGC | 1 cut(s) | 1182 |
| BmuI | ACTGGG | 1 cut(s) | 1883 |
| BoxI | GACNNNNGTC | 1 cut(s) | 641 |
| BpiI | GAAGAC | 4 cut(s) | 169, 1628, 2925, 3005 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2843, 2875 |
| BpmI | CTGGAG | 1 cut(s) | 1119 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1521 |
| BpuEI | CTTGAG | 6 cut(s) | 1192, 1735, 1742, 2020, 2731, 2785 |
| BpuMI | CCSGG | 1 cut(s) | 2741 |
| BsaAI | YACGTR | 2 cut(s) | 12, 1277 |
| BsaBI | GATNNNNATC | 1 cut(s) | 306 |
| BsaWI | WCCGGW | 1 cut(s) | 2903 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 98, 128 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 225, 1405, 1823, 2473, 3133 |
| Bse1I | ACTGG | 6 cut(s) | 467, 1551, 1596, 1878, 2267, 2528 |
| Bse3DI | GCAATG | 2 cut(s) | 1345, 2782 |
| Bse8I | GATNNNNATC | 1 cut(s) | 306 |
| BseAI | TCCGGA | 1 cut(s) | 2903 |
| BseBI | CCWGG | 4 cut(s) | 173, 277, 379, 1915 |
| BseGI | GGATG | 8 cut(s) | 215, 243, 387, 463, 969, 1945, 2271, 3109 |
| BseJI | GATNNNNATC | 1 cut(s) | 306 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 225, 1405, 1823, 2473, 3133 |
| BseMI | GCAATG | 2 cut(s) | 1345, 2782 |
| BseMII | CTCAG | 5 cut(s) | 161, 206, 438, 1512, 2942 |
| BseNI | ACTGG | 6 cut(s) | 467, 1551, 1596, 1878, 2267, 2528 |
| BseRI | GAGGAG | 2 cut(s) | 542, 1309 |
| BsgI | GTGCAG | 3 cut(s) | 259, 2256, 3107 |
| BshFI | GGCC | 7 cut(s) | 158, 533, 1049, 1391, 1816, 2667, 2826 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1510, 3216 |
| BsiHKCI | CYCGRG | 3 cut(s) | 524, 1554, 2289 |
| BsiSI | CCGG | 3 cut(s) | 1541, 2740, 2904 |
| BslFI | GGGAC | 4 cut(s) | 1508, 1891, 2346, 2868 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 225, 1405, 1823, 2473, 3133 |
| BsmAI | GTCTC | 1 cut(s) | 629 |
| BsmFI | GGGAC | 4 cut(s) | 1508, 1891, 2346, 2868 |
| BsmI | GAATGC | 3 cut(s) | 1715, 3151, 3204 |
| BsnI | GGCC | 7 cut(s) | 158, 533, 1049, 1391, 1816, 2667, 2826 |
| BsoBI | CYCGRG | 3 cut(s) | 524, 1554, 2289 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1510, 3216 |
| Bsp13I | TCCGGA | 1 cut(s) | 2903 |
| Bsp143I | GATC | 7 cut(s) | 568, 805, 1161, 1594, 1846, 2127, 2206 |
| Bsp19I | CCATGG | 3 cut(s) | 959, 2961, 3083 |
| BspACI | CCGC | 4 cut(s) | 654, 1218, 2197, 3149 |
| BspANI | GGCC | 7 cut(s) | 158, 533, 1049, 1391, 1816, 2667, 2826 |
| BspCNI | CTCAG | 5 cut(s) | 160, 205, 439, 1513, 2941 |
| BspEI | TCCGGA | 1 cut(s) | 2903 |
| BspHI | TCATGA | 2 cut(s) | 1597, 2980 |
| BspLI | GGNNCC | 2 cut(s) | 6, 3179 |
| BspMI | ACCTGC | 1 cut(s) | 1013 |
| BspOI | GCTAGC | 1 cut(s) | 1182 |
| BspPI | GGATC | 2 cut(s) | 1602, 1854 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BspTI | CTTAAG | 2 cut(s) | 880, 3226 |
| BsrDI | GCAATG | 2 cut(s) | 1345, 2782 |
| BsrI | ACTGG | 6 cut(s) | 467, 1551, 1596, 1878, 2267, 2528 |
| BssMI | GATC | 7 cut(s) | 568, 805, 1161, 1594, 1846, 2127, 2206 |
| BssNAI | GTATAC | 1 cut(s) | 740 |
| BssSI | CACGAG | 1 cut(s) | 1689 |
| BssT1I | CCWWGG | 6 cut(s) | 101, 159, 959, 2668, 2961, 3083 |
| Bst1107I | GTATAC | 1 cut(s) | 740 |
| Bst2BI | CACGAG | 1 cut(s) | 1689 |
| Bst2UI | CCWGG | 4 cut(s) | 173, 277, 379, 1915 |
| Bst4CI | ACNGT | 6 cut(s) | 478, 626, 1070, 1812, 2337, 2876 |
| Bst6I | CTCTTC | 4 cut(s) | 159, 766, 1326, 1794 |
| BstAFI | CTTAAG | 2 cut(s) | 880, 3226 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2649, 2697, 2706 |
| BstBAI | YACGTR | 2 cut(s) | 12, 1277 |
| BstC8I | GCNNGC | 8 cut(s) | 406, 951, 1020, 1180, 1184, 1216, 1220, 3107 |
| BstDEI | CTNAG | 7 cut(s) | 147, 192, 220, 447, 1521, 1766, 2928 |
| BstDSI | CCRYGG | 3 cut(s) | 959, 2961, 3083 |
| BstEII | GGTNACC | 2 cut(s) | 1975, 2337 |
| BstF5I | GGATG | 8 cut(s) | 215, 243, 387, 463, 969, 1945, 2271, 3109 |
| BstH2I | RGCGCY | 1 cut(s) | 1225 |
| BstHHI | GCGC | 3 cut(s) | 690, 1224, 2511 |
| BstKTI | GATC | 7 cut(s) | 571, 808, 1164, 1597, 1849, 2130, 2209 |
| BstMAI | GTCTC | 1 cut(s) | 629 |
| BstMBI | GATC | 7 cut(s) | 568, 805, 1161, 1594, 1846, 2127, 2206 |
| BstNI | CCWGG | 4 cut(s) | 173, 277, 379, 1915 |
| BstNSI | RCATGY | 5 cut(s) | 803, 1015, 2439, 2840, 2883 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 641 |
| BstPI | GGTNACC | 2 cut(s) | 1975, 2337 |
| BstSCI | CCNGG | 5 cut(s) | 171, 275, 377, 1913, 2739 |
| BstSFI | CTRYAG | 2 cut(s) | 1881, 2872 |
| BstV2I | GAAGAC | 4 cut(s) | 169, 1628, 2925, 3005 |
| BstX2I | RGATCY | 1 cut(s) | 1161 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2456 |
| BstYI | RGATCY | 1 cut(s) | 1161 |
| BstZ17I | GTATAC | 1 cut(s) | 740 |
| BsuI | GTATCC | 3 cut(s) | 660, 1548, 2102 |
| BsuRI | GGCC | 7 cut(s) | 158, 533, 1049, 1391, 1816, 2667, 2826 |
| BtgI | CCRYGG | 3 cut(s) | 959, 2961, 3083 |
| BtrI | CACGTC | 1 cut(s) | 1894 |
| BtsCI | GGATG | 8 cut(s) | 215, 243, 387, 463, 969, 1945, 2271, 3109 |
| BtsI | GCAGTG | 3 cut(s) | 2467, 2686, 3238 |
| BtsIMutI | CAGTG | 8 cut(s) | 155, 631, 1477, 1544, 1589, 2467, 2686, 3238 |
| BveI | ACCTGC | 1 cut(s) | 1013 |
| Cac8I | GCNNGC | 8 cut(s) | 406, 951, 1020, 1180, 1184, 1216, 1220, 3107 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1889 |
| CciI | TCATGA | 2 cut(s) | 1597, 2980 |
| CfoI | GCGC | 3 cut(s) | 690, 1224, 2511 |
| Cfr13I | GGNCC | 3 cut(s) | 169, 856, 2665 |
| CseI | GACGC | 1 cut(s) | 874 |
| CsiI | ACCWGGT | 1 cut(s) | 171 |
| Csp6I | GTAC | 4 cut(s) | 13, 1686, 1723, 2877 |
| CviQI | GTAC | 4 cut(s) | 13, 1686, 1723, 2877 |
| DdeI | CTNAG | 7 cut(s) | 147, 192, 220, 447, 1521, 1766, 2928 |
| DpnI | GATC | 7 cut(s) | 570, 807, 1163, 1596, 1848, 2129, 2208 |
| DpnII | GATC | 7 cut(s) | 568, 805, 1161, 1594, 1846, 2127, 2206 |
| DraI | TTTAAA | 3 cut(s) | 825, 1356, 1378 |
| DraIII | CACNNNGTG | 1 cut(s) | 1573 |
| EaeI | YGGCCR | 4 cut(s) | 156, 1047, 1814, 2824 |
| Eam1104I | CTCTTC | 4 cut(s) | 159, 766, 1326, 1794 |
| EarI | CTCTTC | 4 cut(s) | 159, 766, 1326, 1794 |
| Ecl136II | GAGCTC | 1 cut(s) | 1508 |
| Eco130I | CCWWGG | 6 cut(s) | 101, 159, 959, 2668, 2961, 3083 |
| Eco24I | GRGCYC | 1 cut(s) | 1510 |
| Eco32I | GATATC | 2 cut(s) | 414, 1312 |
| Eco47I | GGWCC | 2 cut(s) | 169, 856 |
| Eco53kI | GAGCTC | 1 cut(s) | 1508 |
| Eco57I | CTGAAG | 2 cut(s) | 1445, 2280 |
| Eco72I | CACGTG | 1 cut(s) | 1277 |
| Eco88I | CYCGRG | 3 cut(s) | 524, 1554, 2289 |
| Eco91I | GGTNACC | 2 cut(s) | 1975, 2337 |
| EcoICRI | GAGCTC | 1 cut(s) | 1508 |
| EcoO109I | RGGNCCY | 2 cut(s) | 856, 2665 |
| EcoO65I | GGTNACC | 2 cut(s) | 1975, 2337 |
| EcoRII | CCWGG | 4 cut(s) | 171, 275, 377, 1913 |
| EcoRV | GATATC | 2 cut(s) | 414, 1312 |
| EcoT14I | CCWWGG | 6 cut(s) | 101, 159, 959, 2668, 2961, 3083 |
| EcoT22I | ATGCAT | 1 cut(s) | 2838 |
| EcoT38I | GRGCYC | 1 cut(s) | 1510 |
| ErhI | CCWWGG | 6 cut(s) | 101, 159, 959, 2668, 2961, 3083 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 28, 60, 2222, 2254 |
| FaqI | GGGAC | 4 cut(s) | 1508, 1891, 2346, 2868 |
| FauI | CCCGC | 2 cut(s) | 661, 1211 |
| FauNDI | CATATG | 1 cut(s) | 1327 |
| FblI | GTMKAC | 3 cut(s) | 739, 1057, 1779 |
| FokI | GGATG | 8 cut(s) | 202, 230, 394, 450, 976, 1952, 2278, 3096 |
| FriOI | GRGCYC | 1 cut(s) | 1510 |
| FspBI | CTAG | 5 cut(s) | 75, 1179, 2256, 3102, 3194 |
| GlaI | GCGC | 3 cut(s) | 689, 1223, 2510 |
| GsuI | CTGGAG | 1 cut(s) | 1119 |
| HaeII | RGCGCY | 1 cut(s) | 1225 |
| HaeIII | GGCC | 7 cut(s) | 158, 533, 1049, 1391, 1816, 2667, 2826 |
| HapII | CCGG | 3 cut(s) | 1541, 2740, 2904 |
| HgaI | GACGC | 1 cut(s) | 874 |
| HhaI | GCGC | 3 cut(s) | 690, 1224, 2511 |
| Hin6I | GCGC | 3 cut(s) | 688, 1222, 2509 |
| HinP1I | GCGC | 3 cut(s) | 688, 1222, 2509 |
| HincII | GTYRAC | 1 cut(s) | 1058 |
| HindII | GTYRAC | 1 cut(s) | 1058 |
| HindIII | AAGCTT | 2 cut(s) | 590, 916 |
| HpaII | CCGG | 3 cut(s) | 1541, 2740, 2904 |
| HphI | GGTGA | 7 cut(s) | 44, 1340, 1709, 1987, 2330, 2331, 2963 |
| Hpy166II | GTNNAC | 8 cut(s) | 740, 970, 1058, 1780, 2042, 2433, 2728, 2790 |
| Hpy8I | GTNNAC | 8 cut(s) | 740, 970, 1058, 1780, 2042, 2433, 2728, 2790 |
| HpyCH4III | ACNGT | 6 cut(s) | 478, 626, 1070, 1812, 2337, 2876 |
| HpyCH4IV | ACGT | 4 cut(s) | 11, 1105, 1276, 1893 |
| HpyF3I | CTNAG | 7 cut(s) | 147, 192, 220, 447, 1521, 1766, 2928 |
| HpySE526I | ACGT | 4 cut(s) | 11, 1105, 1276, 1893 |
| HspAI | GCGC | 3 cut(s) | 688, 1222, 2509 |
| Kpn2I | TCCGGA | 1 cut(s) | 2903 |
| Kzo9I | GATC | 7 cut(s) | 568, 805, 1161, 1594, 1846, 2127, 2206 |
| LmnI | GCTCC | 4 cut(s) | 106, 1138, 2549, 3267 |
| MabI | ACCWGGT | 1 cut(s) | 171 |
| MaeI | CTAG | 5 cut(s) | 75, 1179, 2256, 3102, 3194 |
| MaeII | ACGT | 4 cut(s) | 11, 1105, 1276, 1893 |
| MalI | GATC | 7 cut(s) | 570, 807, 1163, 1596, 1848, 2129, 2208 |
| MboI | GATC | 7 cut(s) | 568, 805, 1161, 1594, 1846, 2127, 2206 |
| MfeI | CAATTG | 2 cut(s) | 1362, 2701 |
| MflI | RGATCY | 1 cut(s) | 1161 |
| MhlI | GDGCHC | 2 cut(s) | 1510, 3216 |
| MlsI | TGGCCA | 4 cut(s) | 158, 1049, 1816, 2826 |
| MluNI | TGGCCA | 4 cut(s) | 158, 1049, 1816, 2826 |
| MlyI | GAGTC | 4 cut(s) | 1585, 1709, 2041, 2559 |
| MmeI | TCCRAC | 1 cut(s) | 3120 |
| Mox20I | TGGCCA | 4 cut(s) | 158, 1049, 1816, 2826 |
| Mph1103I | ATGCAT | 1 cut(s) | 2838 |
| MroI | TCCGGA | 1 cut(s) | 2903 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3034 |
| MscI | TGGCCA | 4 cut(s) | 158, 1049, 1816, 2826 |
| MslI | CAYNNNNRTG | 4 cut(s) | 30, 1515, 1665, 3209 |
| Msp20I | TGGCCA | 4 cut(s) | 158, 1049, 1816, 2826 |
| MspA1I | CMGCKG | 1 cut(s) | 1018 |
| MspCI | CTTAAG | 2 cut(s) | 880, 3226 |
| MspI | CCGG | 3 cut(s) | 1541, 2740, 2904 |
| MspR9I | CCNGG | 5 cut(s) | 173, 277, 379, 1915, 2741 |
| MunI | CAATTG | 2 cut(s) | 1362, 2701 |
| Mva1269I | GAATGC | 3 cut(s) | 1715, 3151, 3204 |
| MvaI | CCWGG | 4 cut(s) | 173, 277, 379, 1915 |
| NciI | CCSGG | 1 cut(s) | 2741 |
| NcoI | CCATGG | 3 cut(s) | 959, 2961, 3083 |
| NdeI | CATATG | 1 cut(s) | 1327 |
| NdeII | GATC | 7 cut(s) | 568, 805, 1161, 1594, 1846, 2127, 2206 |
| NheI | GCTAGC | 1 cut(s) | 1178 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 3179 |
| NmeAIII | GCCGAG | 1 cut(s) | 3094 |
| NmuCI | GTSAC | 7 cut(s) | 1400, 1577, 1761, 1975, 2337, 2462, 2867 |
| NsiI | ATGCAT | 1 cut(s) | 2838 |
| NspI | RCATGY | 5 cut(s) | 803, 1015, 2439, 2840, 2883 |
| OliI | CACNNNNGTG | 2 cut(s) | 30, 1665 |
| PaeR7I | CTCGAG | 1 cut(s) | 524 |
| PagI | TCATGA | 2 cut(s) | 1597, 2980 |
| PasI | CCCWGGG | 1 cut(s) | 1914 |
| PciI | ACATGT | 2 cut(s) | 2435, 2879 |
| PctI | GAATGC | 3 cut(s) | 1715, 3151, 3204 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3034 |
| PfeI | GAWTC | 6 cut(s) | 1424, 1550, 2190, 2245, 2354, 2957 |
| PflFI | GACNNNGTC | 1 cut(s) | 173 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1823, 2473 |
| PleI | GAGTC | 4 cut(s) | 1584, 1708, 2041, 2559 |
| PmaCI | CACGTG | 1 cut(s) | 1277 |
| PmlI | CACGTG | 1 cut(s) | 1277 |
| PpsI | GAGTC | 4 cut(s) | 1584, 1708, 2041, 2559 |
| Ppu21I | YACGTR | 2 cut(s) | 12, 1277 |
| PpuMI | RGGWCCY | 1 cut(s) | 856 |
| PscI | ACATGT | 2 cut(s) | 2435, 2879 |
| PshAI | GACNNNNGTC | 1 cut(s) | 641 |
| PshBI | ATTAAT | 1 cut(s) | 941 |
| Psp124BI | GAGCTC | 1 cut(s) | 1510 |
| Psp5II | RGGWCCY | 1 cut(s) | 856 |
| Psp6I | CCWGG | 4 cut(s) | 171, 275, 377, 1913 |
| PspCI | CACGTG | 1 cut(s) | 1277 |
| PspEI | GGTNACC | 2 cut(s) | 1975, 2337 |
| PspGI | CCWGG | 4 cut(s) | 171, 275, 377, 1913 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 3179 |
| PspPI | GGNCC | 3 cut(s) | 169, 856, 2665 |
| PspPPI | RGGWCCY | 1 cut(s) | 856 |
| PspXI | VCTCGAGB | 1 cut(s) | 524 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1889 |
| PsuI | RGATCY | 1 cut(s) | 1161 |
| PsyI | GACNNNGTC | 1 cut(s) | 173 |
| PvuII | CAGCTG | 1 cut(s) | 1018 |
| RsaI | GTAC | 4 cut(s) | 14, 1687, 1724, 2878 |
| RsaNI | GTAC | 4 cut(s) | 13, 1686, 1723, 2877 |
| RseI | CAYNNNNRTG | 4 cut(s) | 30, 1515, 1665, 3209 |
| SacI | GAGCTC | 1 cut(s) | 1510 |
| SalI | GTCGAC | 1 cut(s) | 1056 |
| Sau3AI | GATC | 7 cut(s) | 568, 805, 1161, 1594, 1846, 2127, 2206 |
| Sau96I | GGNCC | 3 cut(s) | 169, 856, 2665 |
| SchI | GAGTC | 4 cut(s) | 1585, 1709, 2041, 2559 |
| ScrFI | CCNGG | 5 cut(s) | 173, 277, 379, 1915, 2741 |
| SduI | GDGCHC | 2 cut(s) | 1510, 3216 |
| SexAI | ACCWGGT | 1 cut(s) | 171 |
| SfcI | CTRYAG | 2 cut(s) | 1881, 2872 |
| Sfr274I | CTCGAG | 1 cut(s) | 524 |
| SinI | GGWCC | 2 cut(s) | 169, 856 |
| SlaI | CTCGAG | 1 cut(s) | 524 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 30, 1515, 1665, 3209 |
| SmlI | CTYRAG | 9 cut(s) | 524, 880, 1207, 1714, 1757, 2035, 2710, 2800, 3226 |
| SmoI | CTYRAG | 9 cut(s) | 524, 880, 1207, 1714, 1757, 2035, 2710, 2800, 3226 |
| SsiI | CCGC | 4 cut(s) | 654, 1218, 2197, 3149 |
| SspI | AATATT | 4 cut(s) | 1627, 2521, 2582, 3033 |
| SspMI | CTAG | 5 cut(s) | 75, 1179, 2256, 3102, 3194 |
| SstI | GAGCTC | 1 cut(s) | 1510 |
| StyD4I | CCNGG | 5 cut(s) | 171, 275, 377, 1913, 2739 |
| StyI | CCWWGG | 6 cut(s) | 101, 159, 959, 2668, 2961, 3083 |
| TaaI | ACNGT | 6 cut(s) | 478, 626, 1070, 1812, 2337, 2876 |
| TaiI | ACGT | 4 cut(s) | 14, 1108, 1279, 1896 |
| TatI | WGTACW | 1 cut(s) | 2876 |
| TauI | GCSGC | 1 cut(s) | 2200 |
| TfiI | GAWTC | 6 cut(s) | 1424, 1550, 2190, 2245, 2354, 2957 |
| TscAI | CASTG | 8 cut(s) | 155, 631, 1477, 1551, 1596, 2467, 2693, 3238 |
| TseFI | GTSAC | 7 cut(s) | 1400, 1577, 1761, 1975, 2337, 2462, 2867 |
| Tsp45I | GTSAC | 7 cut(s) | 1400, 1577, 1761, 1975, 2337, 2462, 2867 |
| TspGWI | ACGGA | 4 cut(s) | 1472, 1677, 2037, 2577 |
| TspRI | CASTG | 8 cut(s) | 155, 631, 1477, 1551, 1596, 2467, 2693, 3238 |
| Tth111I | GACNNNGTC | 1 cut(s) | 173 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1823, 2473 |
| Vha464I | CTTAAG | 2 cut(s) | 880, 3226 |
| VpaK11BI | GGWCC | 2 cut(s) | 169, 856 |
| VspI | ATTAAT | 1 cut(s) | 941 |
| XapI | RAATTY | 5 cut(s) | 609, 776, 1114, 2026, 2966 |
| XceI | RCATGY | 5 cut(s) | 803, 1015, 2439, 2840, 2883 |
| XhoI | CTCGAG | 1 cut(s) | 524 |
| XmiI | GTMKAC | 3 cut(s) | 739, 1057, 1779 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3034 |
| XspI | CTAG | 5 cut(s) | 75, 1179, 2256, 3102, 3194 |
| Zsp2I | ATGCAT | 1 cut(s) | 2838 |