ubiquitin protein ligase activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g05930 FvH4_7g05930 FvH4_7g05930 |
| malus_domestica | MD07G1068200.v1.1 |
| prunus_persica | Prupe.2G085600_v2.0.a1 |
| pyrus_communis | pycom07g05230 |
| rosa_chinensis | RchiOBHm_Chr1g0333131 |
| rosa_laevigata | RLG00000029624 |
| rosa_multiflora | Rmu_sc0007432.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00317770 |
| rosa_rugosa | Rorug01G0107300 Rorug01G0107400 |
| rosa_samantha | Rh1AG130600 Rh1BG099700 Rh1CG124400 Rh1DG135900 |
| rosa_wichuraiana | Rw1G010240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 329 |
| AciI | CCGC | 1 cut(s) | 221 |
| AclWI | GGATC | 3 cut(s) | 155, 203, 279 |
| AcuI | CTGAAG | 1 cut(s) | 494 |
| AfaI | GTAC | 1 cut(s) | 462 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 454 |
| AflII | CTTAAG | 2 cut(s) | 34, 142 |
| AflIII | ACRYGT | 1 cut(s) | 569 |
| AgsI | TTSAA | 3 cut(s) | 29, 52, 95 |
| AluBI | AGCT | 7 cut(s) | 14, 314, 430, 436, 533, 542, 623 |
| AluI | AGCT | 7 cut(s) | 14, 314, 430, 436, 533, 542, 623 |
| AlwI | GGATC | 3 cut(s) | 155, 203, 279 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 99 |
| AsuHPI | GGTGA | 2 cut(s) | 80, 537 |
| BanI | GGYRCC | 1 cut(s) | 329 |
| BbsI | GAAGAC | 2 cut(s) | 249, 313 |
| BccI | CCATC | 2 cut(s) | 184, 505 |
| BceAI | ACGGC | 1 cut(s) | 651 |
| BclI | TGATCA | 2 cut(s) | 201, 409 |
| BfaI | CTAG | 1 cut(s) | 161 |
| BfmI | CTRYAG | 1 cut(s) | 247 |
| BfrI | CTTAAG | 2 cut(s) | 34, 142 |
| BlpI | GCTNAGC | 1 cut(s) | 315 |
| BmiI | GGNNCC | 1 cut(s) | 331 |
| BpiI | GAAGAC | 2 cut(s) | 249, 313 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 315 |
| BpuEI | CTTGAG | 1 cut(s) | 416 |
| BsaAI | YACGTR | 1 cut(s) | 572 |
| BsaBI | GATNNNNATC | 1 cut(s) | 213 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 454 |
| Bse8I | GATNNNNATC | 1 cut(s) | 213 |
| BseGI | GGATG | 1 cut(s) | 535 |
| BseJI | GATNNNNATC | 1 cut(s) | 213 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 454 |
| BseMII | CTCAG | 1 cut(s) | 306 |
| BshNI | GGYRCC | 1 cut(s) | 329 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 454 |
| Bsp1407I | TGTACA | 1 cut(s) | 460 |
| Bsp143I | GATC | 8 cut(s) | 88, 126, 147, 201, 208, 271, 409, 661 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 315 |
| BspACI | CCGC | 1 cut(s) | 221 |
| BspCNI | CTCAG | 1 cut(s) | 307 |
| BspLI | GGNNCC | 1 cut(s) | 331 |
| BspPI | GGATC | 3 cut(s) | 155, 203, 279 |
| BspT107I | GGYRCC | 1 cut(s) | 329 |
| BspTI | CTTAAG | 2 cut(s) | 34, 142 |
| BsrGI | TGTACA | 1 cut(s) | 460 |
| BssMI | GATC | 8 cut(s) | 88, 126, 147, 201, 208, 271, 409, 661 |
| Bst4CI | ACNGT | 6 cut(s) | 100, 292, 406, 449, 549, 585 |
| Bst6I | CTCTTC | 1 cut(s) | 34 |
| BstAFI | CTTAAG | 2 cut(s) | 34, 142 |
| BstAUI | TGTACA | 1 cut(s) | 460 |
| BstBAI | YACGTR | 1 cut(s) | 572 |
| BstDEI | CTNAG | 1 cut(s) | 315 |
| BstF5I | GGATG | 1 cut(s) | 535 |
| BstKTI | GATC | 8 cut(s) | 91, 129, 150, 204, 211, 274, 412, 664 |
| BstMBI | GATC | 8 cut(s) | 88, 126, 147, 201, 208, 271, 409, 661 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 530, 539 |
| BstNSI | RCATGY | 1 cut(s) | 198 |
| BstSFI | CTRYAG | 1 cut(s) | 247 |
| BstV2I | GAAGAC | 2 cut(s) | 249, 313 |
| BstX2I | RGATCY | 1 cut(s) | 208 |
| BstYI | RGATCY | 1 cut(s) | 208 |
| BtsCI | GGATG | 1 cut(s) | 535 |
| BtsI | GCAGTG | 1 cut(s) | 519 |
| BtsIMutI | CAGTG | 2 cut(s) | 519, 581 |
| Csp6I | GTAC | 1 cut(s) | 461 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 105, 140 |
| CviAII | CATG | 3 cut(s) | 195, 199, 259 |
| CviQI | GTAC | 1 cut(s) | 461 |
| DdeI | CTNAG | 1 cut(s) | 315 |
| DpnI | GATC | 8 cut(s) | 90, 128, 149, 203, 210, 273, 411, 663 |
| DpnII | GATC | 8 cut(s) | 88, 126, 147, 201, 208, 271, 409, 661 |
| Eam1104I | CTCTTC | 1 cut(s) | 34 |
| EarI | CTCTTC | 1 cut(s) | 34 |
| Eco57I | CTGAAG | 1 cut(s) | 494 |
| EcoT22I | ATGCAT | 1 cut(s) | 200 |
| FaeI | CATG | 3 cut(s) | 198, 202, 262 |
| FatI | CATG | 3 cut(s) | 194, 198, 258 |
| FbaI | TGATCA | 2 cut(s) | 201, 409 |
| FokI | GGATG | 1 cut(s) | 522 |
| FspBI | CTAG | 1 cut(s) | 161 |
| Hin1II | CATG | 3 cut(s) | 198, 202, 262 |
| HincII | GTYRAC | 1 cut(s) | 352 |
| HindII | GTYRAC | 1 cut(s) | 352 |
| HinfI | GANTC | 6 cut(s) | 5, 168, 252, 370, 488, 590 |
| HphI | GGTGA | 2 cut(s) | 80, 537 |
| Hpy166II | GTNNAC | 2 cut(s) | 352, 472 |
| Hpy188I | TCNGA | 3 cut(s) | 105, 369, 595 |
| Hpy188III | TCNNGA | 4 cut(s) | 92, 275, 341, 652 |
| Hpy8I | GTNNAC | 2 cut(s) | 352, 472 |
| Hpy99I | CGWCG | 1 cut(s) | 134 |
| HpyCH4III | ACNGT | 6 cut(s) | 100, 292, 406, 449, 549, 585 |
| HpyCH4IV | ACGT | 2 cut(s) | 152, 571 |
| HpyCH4V | TGCA | 3 cut(s) | 77, 198, 524 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 530, 539 |
| HpyF3I | CTNAG | 1 cut(s) | 315 |
| HpySE526I | ACGT | 2 cut(s) | 152, 571 |
| Hsp92II | CATG | 3 cut(s) | 198, 202, 262 |
| Ksp22I | TGATCA | 2 cut(s) | 201, 409 |
| Kzo9I | GATC | 8 cut(s) | 88, 126, 147, 201, 208, 271, 409, 661 |
| LpnPI | CCDG | 8 cut(s) | 349, 402, 440, 470, 543, 552, 585, 614 |
| MaeI | CTAG | 1 cut(s) | 161 |
| MaeII | ACGT | 2 cut(s) | 152, 571 |
| MaeIII | GTNAC | 1 cut(s) | 286 |
| MalI | GATC | 8 cut(s) | 90, 128, 149, 203, 210, 273, 411, 663 |
| MboI | GATC | 8 cut(s) | 88, 126, 147, 201, 208, 271, 409, 661 |
| MboII | GAAGA | 6 cut(s) | 51, 56, 209, 254, 318, 671 |
| MfeI | CAATTG | 1 cut(s) | 264 |
| MflI | RGATCY | 1 cut(s) | 208 |
| MluCI | AATT | 6 cut(s) | 18, 54, 83, 264, 452, 682 |
| MlyI | GAGTC | 3 cut(s) | 14, 246, 482 |
| MnlI | CCTC | 2 cut(s) | 123, 262 |
| Mph1103I | ATGCAT | 1 cut(s) | 200 |
| MroXI | GAANNNNTTC | 1 cut(s) | 99 |
| MseI | TTAA | 2 cut(s) | 35, 143 |
| MslI | CAYNNNNRTG | 1 cut(s) | 197 |
| MspCI | CTTAAG | 2 cut(s) | 34, 142 |
| MunI | CAATTG | 1 cut(s) | 264 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 530, 539 |
| NdeII | GATC | 8 cut(s) | 88, 126, 147, 201, 208, 271, 409, 661 |
| NlaIII | CATG | 3 cut(s) | 198, 202, 262 |
| NlaIV | GGNNCC | 1 cut(s) | 331 |
| NmuCI | GTSAC | 1 cut(s) | 286 |
| NsiI | ATGCAT | 1 cut(s) | 200 |
| NspI | RCATGY | 1 cut(s) | 198 |
| PdmI | GAANNNNTTC | 1 cut(s) | 99 |
| PfeI | GAWTC | 3 cut(s) | 168, 370, 590 |
| PleI | GAGTC | 3 cut(s) | 13, 246, 482 |
| PpsI | GAGTC | 3 cut(s) | 13, 246, 482 |
| Ppu21I | YACGTR | 1 cut(s) | 572 |
| PspN4I | GGNNCC | 1 cut(s) | 331 |
| PsuI | RGATCY | 1 cut(s) | 208 |
| RsaI | GTAC | 1 cut(s) | 462 |
| RsaNI | GTAC | 1 cut(s) | 461 |
| RseI | CAYNNNNRTG | 1 cut(s) | 197 |
| SaqAI | TTAA | 2 cut(s) | 35, 143 |
| Sau3AI | GATC | 8 cut(s) | 88, 126, 147, 201, 208, 271, 409, 661 |
| SchI | GAGTC | 3 cut(s) | 14, 246, 482 |
| SfcI | CTRYAG | 1 cut(s) | 247 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 197 |
| SmlI | CTYRAG | 3 cut(s) | 34, 142, 431 |
| SmoI | CTYRAG | 3 cut(s) | 34, 142, 431 |
| Sse9I | AATT | 6 cut(s) | 18, 54, 83, 264, 452, 682 |
| SsiI | CCGC | 1 cut(s) | 221 |
| SspI | AATATT | 1 cut(s) | 324 |
| SspMI | CTAG | 1 cut(s) | 161 |
| TaaI | ACNGT | 6 cut(s) | 100, 292, 406, 449, 549, 585 |
| TaiI | ACGT | 2 cut(s) | 155, 574 |
| TaqI | TCGA | 2 cut(s) | 588, 651 |
| TasI | AATT | 6 cut(s) | 18, 54, 83, 264, 452, 682 |
| TatI | WGTACW | 1 cut(s) | 460 |
| TfiI | GAWTC | 3 cut(s) | 168, 370, 590 |
| Tru1I | TTAA | 2 cut(s) | 35, 143 |
| Tru9I | TTAA | 2 cut(s) | 35, 143 |
| TscAI | CASTG | 2 cut(s) | 526, 588 |
| TseFI | GTSAC | 1 cut(s) | 286 |
| Tsp45I | GTSAC | 1 cut(s) | 286 |
| TspDTI | ATGAA | 2 cut(s) | 297, 686 |
| TspRI | CASTG | 2 cut(s) | 526, 588 |
| Vha464I | CTTAAG | 2 cut(s) | 34, 142 |
| XceI | RCATGY | 1 cut(s) | 198 |
| XmnI | GAANNNNTTC | 1 cut(s) | 99 |
| XspI | CTAG | 1 cut(s) | 161 |
| Zsp2I | ATGCAT | 1 cut(s) | 200 |