Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0014789

Physical Location & Seq

Genomic Coordinates Forward (+)

43253600 .. 43260602

Gene Structure 7003 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00317770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2832 bp

ATGTCGGTGCAGGTGTCCCGGCGCTGGGATACCACTGCATGGATCATCCCTTTGCTCATTCAGAAATTCTCAGTTGAAGAGCAAGCTTCATTAGTCTGGAAGCTTTTGAGCAGCATCCCCACGAATATAGTGGCTAAACTCATTCCCTGGCTAAAGTCCTCCTTGTCACTTGATGAATGTCAGCATCTGTACAAGTGCTTAAGTATGATAGTACCAGCCGAGAAGCTTCTCCAAGAGGTCATTTTCGCCTGGATGGAAGGGAAAGACAATTGTGCTGGCATGACAGCTGATCGAAAAGATGATACAAGTTGTGCATATGAGTTTAATGGGGTGTATCCAATAGATGATATGTTGCTTTGGCATCATGCTATTGAGACAGAGTTGAATGAAACACTTGTGGAGGCGAAGAAGATGCCTATTTCTGGAGATGTTACTAATTATGATCTACTGGCTTTCTATGACAGGCTGCAATTTATTGCTGAAATTTGCATGTTTCACAGTATTGCTGAGGAAACGGTTCTATATCCTGCAGTGTATGGAGAAATTTCAATTTTCCATGAGCACAGAAATGAAGTAAATCTAACCAATGAGTTTAGGTGTTTGCTCGAAAGATTAAAAAGAGCATCAACAATTCCTTCCACAGCTGCTGAATTTCATTCAAAGATATGCTTCCGTGCTGATCAAATAATGAATACTTTAAAGGCGCATTTCCATGATGAGGAAGTTAAGGTACTTCCACTTGCTCGAAAGCACTTGAGCATTAAAAGACAACAGGAACTTCTGCATCAGAGCTTGTGTGCGATGCCATTGAAACTAATTGAGCGTGTCTTGCCATGGCTGGTAAAGTCATTGACTGCAAATGAAGCCCAGAATTTTGTCAAGAACATGCAGTTGGCAGCTCCAGCATCAGATATCGCACTGGTGCAGCTCTTTTGTGGTTGGGCTAGCAAGGCTAGTAATGACTGCTTATGCTCATCTAGTTCCTTGCATATCAACTCTATGTCACCATCACATTCAGTTTGTGAAAAATCCAATAGCCATTCAACCACTGGAATACCTGCACAACCAATAGATGTTGTTTTTAAAGTTCATAAGGTCATACGCCGTGACTTGGAATATCTAGATACTGAATCTGAAAGGCTTAGTAACTGTGATGAAATATTTCTTCAGCAGTTCATTGAAAGTTTCTGTTTGTTATGGGGCTTATATAGAGCTCATAGTAATGCAGAGGATTTTGTATTGTATCCGGCAATGGAATCCAGAGACGCACTTCAAAATGTAAGTCACTCCTACACACTTGATCATAAGCAAGAGGAAGATGCATTTGAAAATATTTCAGGTGTTCTTCTTGAGCTTTCTCACCTTCACAGAGGTACAAGATTTGCTGCCCCCATATGTGAATGTGTGGGAAAGTACTATGAGCTGGCAAACAGGCTTCGAATAATGTTCATGTCGCTAAGAATGATGGTAGATGAGCACATGTACCGGGAAGAGCTTGAGCTGTGGCCATTATTTGGAGCACACTTCTCTGTGGAGGAGCAAAACAAAATGATCGGTTTCATACTGGGGACTACAGGTGCTGAAGTTCTCCAATCTATGTTACCATGGGTTACTTCTGCACTTACTGAGGATGAACAGAGTAAAATGATGGATACCTTCAAGAATGTTACGAAAAATACAATGTTCAAGGAGTGGCTTAGTGAATGCGGGAAAGGAAGCTCACTGTCAACTCTACTGCCTAAACTGGAAACTAGCATTTTCATAAAAGGTACTGGATTTGAAGAAAGCCATCACCAAATTTATCATACTTTCAACTCTCATACGCGGAATAACTTGAAGCATCAAATGACTCGTTACTGGATTGCTGCTCAGCAGAGTTTAACTATAGCAATAGCAGTGGATAGTTCAAATAGTGAACAGTTAGGGGGACTGTCACCAACATTTCGAGATCATGAGAAAACAGTGTATGGCTGCCAGCATTACAAGAGAAACTGCAAACTCCTAGCTGCTTGCTGCGGCAAACTGTTCACTTGTAGATTTTGCCATGACATTATGAGCGACCACCCAATGGATAGGAAAGCAACATCCAAAATGATGTGTATGAGCTGTCTTAATATTCAGCCAGTTGGGCCAGTATGCTCGACAGCTTCTTGCAATGGATTTCCAATGGCAAAATATTATTGTAATATTTGCAACCTCTTTGATGATGACAGGAATGTCTACCACTGTCCATTTTGCAACTTATGCCGAGTAGGGAAGGGCCTTGGCATTGATTATTTTCACTGCATGTCGTGCAATTGTTGCATGGGGATGGCTTCGGTGAACCACAAGTGCCAGGAGAAATGTCTAGAAACCAACTGCCCTGTCTGCAATGAGTTCTTATTCACATCAAGTTCAAGAATCAAAGCTTTACCATGTGGCCATTGTATGCATTTAGCTTGCTTCAAGATGACATCAACTCAATCCTCACTACTTGTAGATAGTGATGAGACCATGGAATTTTATAGCTATGACCAAAAAACTGAAATGACTTCATGCACTGACATTAATCCTGAAGGGAGATTTTTCATGCGCACGAGCTTCTGGGTAAATATTTTATATCAGCTTGTCTTATGGTTTGAACACCTTAATGGAAGACTAGTTGTACCAAGATTCCTGCAAAGATTAAAAAGGGGATTGGAGAATGGAGTAGCAGGACAGAAGGCTAAAGAGAGGTGTGTGTTGTGTTGTGTGGTGCTCTGCGGTCTGGTGTTGTTTTGTGTCTTAAGTACTCTTCTAATTTTGCTTGGGTTCAAAGCATTAGGAAGAAACAAGTACATTCAACTATTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hemerythrin zf-CHY zf-RING_2 zinc_ribbon_6

Protein Analysis

943

Amino Acids

107.65

Weight (kDa)

6.34

Isoelectric Point (pI)

49.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CHY	PF05495	658 - 726	4.7e-18	CHY zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014789)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g05930 FvH4_7g05930 FvH4_7g05930
malus_domestica	MD07G1068200.v1.1
prunus_persica	Prupe.2G085600_v2.0.a1
pyrus_communis	pycom07g05230
rosa_chinensis	RchiOBHm_Chr1g0333131
rosa_laevigata	RLG00000029624
rosa_multiflora	Rmu_sc0007432.1_g000001
rosa_roxburghii	Rroxscaffold_4G00317770
rosa_rugosa	Rorug01G0107300 Rorug01G0107400
rosa_samantha	Rh1AG130600 Rh1BG099700 Rh1CG124400 Rh1DG135900
rosa_wichuraiana	Rw1G010240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2216
Acc16I	TGCGCA	1 cut(s)	2573
Acc36I	ACCTGC	1 cut(s)	1066
AccB7I	CCANNNNNTGG	3 cut(s)	39, 1514, 2068
AccI	GTMKAC	1 cut(s)	2220
AccII	CGCG	1 cut(s)	1825
AciI	CCGC	4 cut(s)	1707, 1825, 2016, 2742
AclWI	GGATC	1 cut(s)	50
AcoI	YGGCCR	2 cut(s)	1505, 2419
AcsI	RAATTY	7 cut(s)	65, 483, 543, 650, 871, 1797, 2498
AcuI	CTGAAG	3 cut(s)	1151, 1602, 2574
AfiI	CCNNNNNNNGG	8 cut(s)	24, 25, 39, 422, 718, 1111, 1514, 2068
AflII	CTTAAG	2 cut(s)	199, 2764
AflIII	ACRYGT	1 cut(s)	1479
AhlI	ACTAGT	1 cut(s)	2638
AjnI	CCWGG	3 cut(s)	146, 248, 2334
AjuI	GAANNNNNNNTTGG	2 cut(s)	875, 907
Alw21I	GWGCWC	5 cut(s)	564, 1216, 1479, 1522, 2739
Alw26I	GTCTC	3 cut(s)	368, 1257, 2483
AlwI	GGATC	1 cut(s)	50
AlwNI	CAGNNNCTG	3 cut(s)	187, 647, 1580
AoxI	GGCC	4 cut(s)	1505, 2129, 2260, 2419
ApoI	RAATTY	7 cut(s)	65, 483, 543, 650, 871, 1797, 2498
ArsI	GACNNNNNNTTYG	2 cut(s)	1267, 1299
AseI	ATTAAT	1 cut(s)	2547
Asp700I	GAANNNNTTC	2 cut(s)	516, 1161
AspLEI	GCGC	3 cut(s)	24, 706, 2574
AspS9I	GGNCC	2 cut(s)	2129, 2260
AsuC2I	CCSGG	2 cut(s)	19, 1487
AsuHPI	GGTGA	5 cut(s)	996, 1352, 1784, 1926, 2332
AsuII	TTCGAA	1 cut(s)	1438
AsuNHI	GCTAGC	1 cut(s)	944
BalI	TGGCCA	2 cut(s)	1507, 2421
BanII	GRGCYC	1 cut(s)	1216
BarI	GAAGNNNNNNTAC	2 cut(s)	714, 746
BauI	CACGAG	1 cut(s)	2575
BbsI	GAAGAC	1 cut(s)	2641
Bbv12I	GWGCWC	5 cut(s)	564, 1216, 1479, 1522, 2739
BbvCI	CCTCAGC	1 cut(s)	507
BccI	CCATC	6 cut(s)	247, 1015, 1459, 1642, 1797, 2305
BceAI	ACGGC	1 cut(s)	1089
BcgI	CGANNNNNNTGC	2 cut(s)	394, 428
BciT130I	CCWGG	3 cut(s)	148, 250, 2336
BciVI	GTATCC	4 cut(s)	22, 345, 1254, 1645
BclI	TGATCA	2 cut(s)	679, 1300
BcnI	CCSGG	2 cut(s)	19, 1487
BcoDI	GTCTC	3 cut(s)	368, 1257, 2483
BcuI	ACTAGT	1 cut(s)	2638
BfaI	CTAG	8 cut(s)	945, 954, 978, 1121, 1752, 2003, 2348, 2639
BfmI	CTRYAG	3 cut(s)	528, 1572, 1884
BfoI	RGCGCY	1 cut(s)	25
BfrI	CTTAAG	2 cut(s)	199, 2764
BfuAI	ACCTGC	1 cut(s)	1066
BfuI	GTATCC	4 cut(s)	22, 345, 1254, 1645
BglI	GCCNNNNNGGC	1 cut(s)	2128
BlpI	GCTNAGC	1 cut(s)	1869
BmcAI	AGTACT	2 cut(s)	1415, 2770
Bme1390I	CCNGG	5 cut(s)	19, 148, 250, 1487, 2336
BmgT120I	GGNCC	2 cut(s)	2129, 2260
BmrFI	CCNGG	5 cut(s)	19, 148, 250, 1487, 2336
BmrI	ACTGGG	1 cut(s)	1574
BmtI	GCTAGC	1 cut(s)	948
BmuI	ACTGGG	1 cut(s)	1574
BpiI	GAAGAC	1 cut(s)	2641
BpmI	CTGGAG	2 cut(s)	444, 885
Bpu10I	CCTNAGC	1 cut(s)	507
Bpu1102I	GCTNAGC	1 cut(s)	1869
Bpu14I	TTCGAA	1 cut(s)	1438
BpuEI	CTTGAG	3 cut(s)	775, 1370, 1517
BpuMI	CCSGG	2 cut(s)	19, 1487
BsaI	GGTCTC	1 cut(s)	2483
BsaJI	CCNNGG	5 cut(s)	146, 833, 1604, 2263, 2493
Bsc4I	CCNNNNNNNGG	8 cut(s)	24, 25, 39, 422, 718, 1111, 1514, 2068
Bse1I	ACTGG	9 cut(s)	453, 924, 1054, 1569, 1749, 1777, 1862, 2123, 2132
Bse3DI	GCAATG	3 cut(s)	1257, 2161, 2377
BseBI	CCWGG	3 cut(s)	148, 250, 2336
BseDI	CCNNGG	5 cut(s)	146, 833, 1604, 2263, 2493
BseGI	GGATG	6 cut(s)	45, 114, 258, 1636, 2084, 2316
BseLI	CCNNNNNNNGG	8 cut(s)	24, 25, 39, 422, 718, 1111, 1514, 2068
BseMI	GCAATG	3 cut(s)	1257, 2161, 2377
BseMII	CTCAG	4 cut(s)	84, 498, 1617, 1883
BseNI	ACTGG	9 cut(s)	453, 924, 1054, 1569, 1749, 1777, 1862, 2123, 2132
BseRI	GAGGAG	1 cut(s)	1550
BseYI	CCCAGC	1 cut(s)	24
BsgI	GTGCAG	4 cut(s)	29, 944, 1044, 1602
Bsh1236I	CGCG	1 cut(s)	1825
BshFI	GGCC	4 cut(s)	1507, 2131, 2262, 2421
BsiHKAI	GWGCWC	5 cut(s)	564, 1216, 1479, 1522, 2739
BsiSI	CCGG	3 cut(s)	19, 1247, 1486
BslFI	GGGAC	2 cut(s)	1582, 1941
BslI	CCNNNNNNNGG	8 cut(s)	24, 25, 39, 422, 718, 1111, 1514, 2068
BsmAI	GTCTC	3 cut(s)	368, 1257, 2483
BsmBI	CGTCTC	1 cut(s)	1257
BsmFI	GGGAC	2 cut(s)	1582, 1941
BsmI	GAATGC	1 cut(s)	1709
BsnI	GGCC	4 cut(s)	1507, 2131, 2262, 2421
Bso31I	GGTCTC	1 cut(s)	2483
Bsp119I	TTCGAA	1 cut(s)	1438
Bsp1286I	GDGCHC	5 cut(s)	564, 1216, 1479, 1522, 2739
Bsp1407I	TGTACA	1 cut(s)	189
Bsp143I	GATC	7 cut(s)	42, 289, 442, 679, 1300, 1551, 1948
Bsp1720I	GCTNAGC	1 cut(s)	1869
Bsp19I	CCATGG	3 cut(s)	833, 1604, 2493
BspACI	CCGC	4 cut(s)	1707, 1825, 2016, 2742
BspANI	GGCC	4 cut(s)	1507, 2131, 2262, 2421
BspCNI	CTCAG	4 cut(s)	83, 499, 1618, 1882
BspFNI	CGCG	1 cut(s)	1825
BspHI	TCATGA	1 cut(s)	1951
BspMAI	CTGCAG	1 cut(s)	532
BspMI	ACCTGC	1 cut(s)	1066
BspOI	GCTAGC	1 cut(s)	948
BspPI	GGATC	1 cut(s)	50
BspQI	GCTCTTC	2 cut(s)	72, 1485
BspT104I	TTCGAA	1 cut(s)	1438
BspTI	CTTAAG	2 cut(s)	199, 2764
BspTNI	GGTCTC	1 cut(s)	2483
BsrDI	GCAATG	3 cut(s)	1257, 2161, 2377
BsrGI	TGTACA	1 cut(s)	189
BsrI	ACTGG	9 cut(s)	453, 924, 1054, 1569, 1749, 1777, 1862, 2123, 2132
BssECI	CCNNGG	5 cut(s)	146, 833, 1604, 2263, 2493
BssMI	GATC	7 cut(s)	42, 289, 442, 679, 1300, 1551, 1948
BssSI	CACGAG	1 cut(s)	2575
BssT1I	CCWWGG	4 cut(s)	833, 1604, 2263, 2493
Bst2BI	CACGAG	1 cut(s)	2575
Bst2UI	CCWGG	3 cut(s)	148, 250, 2336
Bst4CI	ACNGT	9 cut(s)	500, 517, 1151, 1725, 1920, 1932, 1963, 2025, 2228
Bst6I	CTCTTC	3 cut(s)	72, 1485, 2778
BstAFI	CTTAAG	2 cut(s)	199, 2764
BstAPI	GCANNNNNTGC	3 cut(s)	2244, 2292, 2301
BstAUI	TGTACA	1 cut(s)	189
BstBI	TTCGAA	1 cut(s)	1438
BstC8I	GCNNGC	7 cut(s)	84, 277, 946, 1425, 1976, 2011, 2440
BstDEI	CTNAG	7 cut(s)	70, 507, 1142, 1457, 1626, 1697, 1869
BstDSI	CCRYGG	3 cut(s)	833, 1604, 2493
BstF5I	GGATG	6 cut(s)	45, 114, 258, 1636, 2084, 2316
BstFNI	CGCG	1 cut(s)	1825
BstH2I	RGCGCY	1 cut(s)	25
BstHHI	GCGC	3 cut(s)	24, 706, 2574
BstKTI	GATC	7 cut(s)	45, 292, 445, 682, 1303, 1554, 1951
BstMAI	GTCTC	3 cut(s)	368, 1257, 2483
BstMBI	GATC	7 cut(s)	42, 289, 442, 679, 1300, 1551, 1948
BstMWI	GCNNNNNNNGC	9 cut(s)	829, 863, 902, 950, 2128, 2244, 2292, 2301, 2367
BstNI	CCWGG	3 cut(s)	148, 250, 2336
BstNSI	RCATGY	4 cut(s)	493, 889, 1483, 2290
BstSCI	CCNGG	5 cut(s)	17, 146, 248, 1485, 2334
BstSFI	CTRYAG	3 cut(s)	528, 1572, 1884
BstUI	CGCG	1 cut(s)	1825
BstV2I	GAAGAC	1 cut(s)	2641
BsuI	GTATCC	4 cut(s)	22, 345, 1254, 1645
BsuRI	GGCC	4 cut(s)	1507, 2131, 2262, 2421
BtgI	CCRYGG	3 cut(s)	833, 1604, 2493
BtgZI	GCGATG	1 cut(s)	815
BtsCI	GGATG	6 cut(s)	45, 114, 258, 1636, 2084, 2316
BtsI	GCAGTG	4 cut(s)	33, 537, 1902, 2281
BveI	ACCTGC	1 cut(s)	1066
Cac8I	GCNNGC	7 cut(s)	84, 277, 946, 1425, 1976, 2011, 2440
CaiI	CAGNNNCTG	3 cut(s)	187, 647, 1580
CciI	TCATGA	1 cut(s)	1951
CfoI	GCGC	3 cut(s)	24, 706, 2574
Cfr13I	GGNCC	2 cut(s)	2129, 2260
CseI	GACGC	1 cut(s)	1274
CspCI	CAANNNNNGTGG	2 cut(s)	1878, 1913
DdeI	CTNAG	7 cut(s)	70, 507, 1142, 1457, 1626, 1697, 1869
DpnI	GATC	7 cut(s)	44, 291, 444, 681, 1302, 1553, 1950
DpnII	GATC	7 cut(s)	42, 289, 442, 679, 1300, 1551, 1948
DraI	TTTAAA	2 cut(s)	699, 1084
DrdI	GACNNNNNNGTC	1 cut(s)	2216
DseDI	GACNNNNNNGTC	1 cut(s)	2216
EaeI	YGGCCR	2 cut(s)	1505, 2419
Eam1104I	CTCTTC	3 cut(s)	72, 1485, 2778
EarI	CTCTTC	3 cut(s)	72, 1485, 2778
Ecl136II	GAGCTC	1 cut(s)	1214
Eco130I	CCWWGG	4 cut(s)	833, 1604, 2263, 2493
Eco24I	GRGCYC	1 cut(s)	1216
Eco31I	GGTCTC	1 cut(s)	2483
Eco32I	GATATC	1 cut(s)	913
Eco53kI	GAGCTC	1 cut(s)	1214
Eco57I	CTGAAG	3 cut(s)	1151, 1602, 2574
EcoICRI	GAGCTC	1 cut(s)	1214
EcoO109I	RGGNCCY	1 cut(s)	2260
EcoRII	CCWGG	3 cut(s)	146, 248, 2334
EcoRV	GATATC	1 cut(s)	913
EcoT14I	CCWWGG	4 cut(s)	833, 1604, 2263, 2493
EcoT22I	ATGCAT	2 cut(s)	1324, 2433
EcoT38I	GRGCYC	1 cut(s)	1216
ErhI	CCWWGG	4 cut(s)	833, 1604, 2263, 2493
Esp3I	CGTCTC	1 cut(s)	1257
FalI	AAGNNNNNCTT	4 cut(s)	146, 178, 653, 685
FaqI	GGGAC	2 cut(s)	1582, 1941
FauI	CCCGC	1 cut(s)	1700
FauNDI	CATATG	2 cut(s)	316, 1394
FbaI	TGATCA	2 cut(s)	679, 1300
FblI	GTMKAC	1 cut(s)	2220
FokI	GGATG	6 cut(s)	32, 101, 265, 1643, 2071, 2323
FriOI	GRGCYC	1 cut(s)	1216
FspAI	RTGCGCAY	1 cut(s)	2573
FspBI	CTAG	8 cut(s)	945, 954, 978, 1121, 1752, 2003, 2348, 2639
FspI	TGCGCA	1 cut(s)	2573
GlaI	GCGC	3 cut(s)	23, 705, 2573
GsaI	CCCAGC	1 cut(s)	28
GsuI	CTGGAG	2 cut(s)	444, 885
HaeII	RGCGCY	1 cut(s)	25
HaeIII	GGCC	4 cut(s)	1507, 2131, 2262, 2421
HapII	CCGG	3 cut(s)	19, 1247, 1486
HgaI	GACGC	1 cut(s)	1274
HhaI	GCGC	3 cut(s)	24, 706, 2574
Hin6I	GCGC	3 cut(s)	22, 704, 2572
HinP1I	GCGC	3 cut(s)	22, 704, 2572
HincII	GTYRAC	1 cut(s)	1728
HindII	GTYRAC	1 cut(s)	1728
HindIII	AAGCTT	4 cut(s)	84, 101, 224, 2406
HinfI	GANTC	5 cut(s)	1130, 1256, 1849, 2400, 2652
HpaII	CCGG	3 cut(s)	19, 1247, 1486
HphI	GGTGA	5 cut(s)	996, 1352, 1784, 1926, 2332
Hpy166II	GTNNAC	5 cut(s)	1728, 1916, 2028, 2221, 2323
Hpy188I	TCNGA	4 cut(s)	63, 789, 910, 1135
Hpy8I	GTNNAC	5 cut(s)	1728, 1916, 2028, 2221, 2323
HpyAV	CCTTC	7 cut(s)	251, 645, 1373, 1666, 2251, 2549, 2695
HpyCH4III	ACNGT	9 cut(s)	500, 517, 1151, 1725, 1920, 1932, 1963, 2025, 2228
HpyF10VI	GCNNNNNNNGC	9 cut(s)	829, 863, 902, 950, 2128, 2244, 2292, 2301, 2367
HpyF3I	CTNAG	7 cut(s)	70, 507, 1142, 1457, 1626, 1697, 1869
HspAI	GCGC	3 cut(s)	22, 704, 2572
Ksp22I	TGATCA	2 cut(s)	679, 1300
Kzo9I	GATC	7 cut(s)	42, 289, 442, 679, 1300, 1551, 1948
LguI	GCTCTTC	2 cut(s)	72, 1485
LmnI	GCTCC	3 cut(s)	904, 1517, 1537
MaeI	CTAG	8 cut(s)	945, 954, 978, 1121, 1752, 2003, 2348, 2639
MalI	GATC	7 cut(s)	44, 291, 444, 681, 1302, 1553, 1950
MboI	GATC	7 cut(s)	42, 289, 442, 679, 1300, 1551, 1948
MfeI	CAATTG	2 cut(s)	268, 2296
MhlI	GDGCHC	5 cut(s)	564, 1216, 1479, 1522, 2739
MlsI	TGGCCA	2 cut(s)	1507, 2421
MluNI	TGGCCA	2 cut(s)	1507, 2421
MlyI	GAGTC	1 cut(s)	1843
Mox20I	TGGCCA	2 cut(s)	1507, 2421
Mph1103I	ATGCAT	2 cut(s)	1324, 2433
MroXI	GAANNNNTTC	2 cut(s)	516, 1161
MscI	TGGCCA	2 cut(s)	1507, 2421
MslI	CAYNNNNRTG	5 cut(s)	567, 711, 1221, 2309, 2628
Msp20I	TGGCCA	2 cut(s)	1507, 2421
MspA1I	CMGCKG	2 cut(s)	287, 644
MspCI	CTTAAG	2 cut(s)	199, 2764
MspI	CCGG	3 cut(s)	19, 1247, 1486
MspR9I	CCNGG	5 cut(s)	19, 148, 250, 1487, 2336
MunI	CAATTG	2 cut(s)	268, 2296
Mva1269I	GAATGC	1 cut(s)	1709
MvaI	CCWGG	3 cut(s)	148, 250, 2336
MvnI	CGCG	1 cut(s)	1825
MwoI	GCNNNNNNNGC	9 cut(s)	829, 863, 902, 950, 2128, 2244, 2292, 2301, 2367
NciI	CCSGG	2 cut(s)	19, 1487
NcoI	CCATGG	3 cut(s)	833, 1604, 2493
NdeI	CATATG	2 cut(s)	316, 1394
NdeII	GATC	7 cut(s)	42, 289, 442, 679, 1300, 1551, 1948
NheI	GCTAGC	1 cut(s)	944
NmeAIII	GCCGAG	2 cut(s)	244, 2273
NmuCI	GTSAC	5 cut(s)	165, 1002, 1106, 1283, 1932
NsbI	TGCGCA	1 cut(s)	2573
NsiI	ATGCAT	2 cut(s)	1324, 2433
NspI	RCATGY	4 cut(s)	493, 889, 1483, 2290
NspV	TTCGAA	1 cut(s)	1438
PagI	TCATGA	1 cut(s)	1951
PciI	ACATGT	1 cut(s)	1479
PciSI	GCTCTTC	2 cut(s)	72, 1485
PctI	GAATGC	1 cut(s)	1709
PdmI	GAANNNNTTC	2 cut(s)	516, 1161
PfeI	GAWTC	4 cut(s)	1130, 1256, 2400, 2652
PflMI	CCANNNNNTGG	3 cut(s)	39, 1514, 2068
PleI	GAGTC	1 cut(s)	1843
PpsI	GAGTC	1 cut(s)	1843
PscI	ACATGT	1 cut(s)	1479
PshBI	ATTAAT	1 cut(s)	2547
Psp124BI	GAGCTC	1 cut(s)	1216
Psp6I	CCWGG	3 cut(s)	146, 248, 2334
PspFI	CCCAGC	1 cut(s)	24
PspGI	CCWGG	3 cut(s)	146, 248, 2334
PspPI	GGNCC	2 cut(s)	2129, 2260
PstI	CTGCAG	1 cut(s)	532
PstNI	CAGNNNCTG	3 cut(s)	187, 647, 1580
PvuII	CAGCTG	2 cut(s)	287, 644
RseI	CAYNNNNRTG	5 cut(s)	567, 711, 1221, 2309, 2628
SacI	GAGCTC	1 cut(s)	1216
SapI	GCTCTTC	2 cut(s)	72, 1485
Sau3AI	GATC	7 cut(s)	42, 289, 442, 679, 1300, 1551, 1948
Sau96I	GGNCC	2 cut(s)	2129, 2260
ScaI	AGTACT	2 cut(s)	1415, 2770
SchI	GAGTC	1 cut(s)	1843
ScrFI	CCNGG	5 cut(s)	19, 148, 250, 1487, 2336
SduI	GDGCHC	5 cut(s)	564, 1216, 1479, 1522, 2739
SfcI	CTRYAG	3 cut(s)	528, 1572, 1884
SfuI	TTCGAA	1 cut(s)	1438
SmiMI	CAYNNNNRTG	5 cut(s)	567, 711, 1221, 2309, 2628
SmlI	CTYRAG	5 cut(s)	199, 754, 1349, 1496, 2764
SmoI	CTYRAG	5 cut(s)	199, 754, 1349, 1496, 2764
SpeI	ACTAGT	1 cut(s)	2638
SsiI	CCGC	4 cut(s)	1707, 1825, 2016, 2742
SspI	AATATT	6 cut(s)	1161, 1333, 2116, 2177, 2188, 2593
SspMI	CTAG	8 cut(s)	945, 954, 978, 1121, 1752, 2003, 2348, 2639
SstI	GAGCTC	1 cut(s)	1216
StyD4I	CCNGG	5 cut(s)	17, 146, 248, 1485, 2334
StyI	CCWWGG	4 cut(s)	833, 1604, 2263, 2493
TaaI	ACNGT	9 cut(s)	500, 517, 1151, 1725, 1920, 1932, 1963, 2025, 2228
TaqI	TCGA	6 cut(s)	292, 606, 745, 1438, 1945, 2141
TatI	WGTACW	4 cut(s)	189, 1413, 2768, 2814
TauI	GCSGC	1 cut(s)	2019
TfiI	GAWTC	4 cut(s)	1130, 1256, 2400, 2652
TseFI	GTSAC	5 cut(s)	165, 1002, 1106, 1283, 1932
Tsp45I	GTSAC	5 cut(s)	165, 1002, 1106, 1283, 1932
TspGWI	ACGGA	1 cut(s)	662
Van91I	CCANNNNNTGG	3 cut(s)	39, 1514, 2068
Vha464I	CTTAAG	2 cut(s)	199, 2764
VspI	ATTAAT	1 cut(s)	2547
XapI	RAATTY	7 cut(s)	65, 483, 543, 650, 871, 1797, 2498
XbaI	TCTAGA	2 cut(s)	1120, 2347
XceI	RCATGY	4 cut(s)	493, 889, 1483, 2290
XcmI	CCANNNNNNNNNTGG	2 cut(s)	127, 1046
XmiI	GTMKAC	1 cut(s)	2220
XmnI	GAANNNNTTC	2 cut(s)	516, 1161
XspI	CTAG	8 cut(s)	945, 954, 978, 1121, 1752, 2003, 2348, 2639
ZrmI	AGTACT	2 cut(s)	1415, 2770
Zsp2I	ATGCAT	2 cut(s)	1324, 2433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.