Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007432.1

Orthogroup ID

OG0014789

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 5512

Gene Structure 5512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007432.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2835 bp

aaattctcagttgaagagcaagcttcattagtctggaagcttttgagcagcatccccacgaatatagtggctaaactcattccctggctagcttcctccttgtcacttgatgaatgtcagcatctgtacaagtgcttaagtatgatagtaccagccgagaagcttctccaagaggtcattttcacctggatggaaggaaaagacaattgtgctggcatgacagctgatcgaaaagatgatacaagttgtgcatatgagttcaatggggtgtatccaatagatgatatgttgctttggcatcatgctattgagacagagttgaatgaaacacttgcggaagagaagaagatgtctatttctggagatgttattaattatgatttactggctttctatgacaggctgcaatttattgctgaaatttgcatgtttcacagtattgctgaggaaacggttctatatcctgcagtgtatggagaaatttcaattttccatgagcacagaaatgaagtaaatctaaccaatgagtttaggtgtttgctcgaaagtttaaaaagcgcatcaacaattccttccacagctgctgaatttcattcaaagatatgctcccgtgctgatcaaataatgaaaactttaaaggcgcatttccatgatgaggaagttaaggtacttccacttgttcgaaagcacttgagcattaaaaaacaacaggaacttctgcatcagagcttgtgtgtgatgcccttgaaactaattgagcgtgtcttgccatggctggtaaagtcattgactgcaaatgaagcccagaatttagtcaataacatgcagttggcagctccagcatcagatatcgcactggtgcagctcttttgtggttgggctagtaaggcttctaatgactgcctatgctcatctagttccttgcatatcaactctatgtcaccatcacattcagtttgtgaaaaatccaatagctgttctaccactggaatacctgcacaaccaatagatgttgtttttaaagttcataaggccatacgccgtgacttggaatatctagacactgaatctgaaaggcttagtaactgtgatgaaatatttcttcagcagttcattgaaagtttctgtttgttatggggcttatatagagctcatagtaatgcagaggattttgtattgtatccggcaatggaatccagagacacacttcaaaatgtaagtcactcctacacacttgatcataagcaagaggaagatgcatttgaaaatatttcaggtgttcttcttgagctttctcagcttcacagaggtacaagatctggtgcccccataagtgaatgtgtgggaaagtaccatgagctggcatacaagcttcgaataatgttcatgtcgctaagaatgatggtagatgagcacatgtaccaggaagagcttgagctgtggccattatttggagcacacttctctgtggaggagcacaacaaaatgatcggtttcatactggggactacaggtgctgaagttctccaatctatgttaccatgggttacttctgcacttactgaggatgaacggagtaaaatgatggataccttcaagaatgttacaaaaaatacaatgttcaaggagtggcttagtgaatgcaggaaaggaagcttactgtcaactctaccgcctaaaccagaaactagcattttcataaaaggtactggatttgaagaaagccatcaccaaattgatcatactttcaactctcatacgcggaatgacttgaagcatcaaatgactagttactggattgctgctcagcagagtttaactatagcaatagcagtggatagttcaaatagtgaacagctagggggactgtcaccaacgtttcgagatcatgagaaaacagtgtatggctgccagcattacaagagaaactgcaaactcctagctgcttgctgcggcaaactgttcacttgtagattttgccatgacattatgagcgaccacccaatggataggaaagcaacatccaaaatgatgtgtatgagctgtcttaatattcagccagttgggtcagtatgctcaacagcttcttgcaatggatttccaatggcaaaatattattgtaatatttgcaacctctttgatgatgacaggaatgtctaccactgtccattttgcaacttatgccgagtagggaagggccttggcattgattattttcactgcatgtcgtgcaattgttgcatggggatggcttcggtgaaccacaagtgccaggagaaatgtctagaaaccaactgccctgtctgcaatgagttcctattcacatcaagttcaagaatcaaagctttaccatgtggccattgtatgcatttagcttgcttcaagacttgcactcagagcaacagtcaatacacttgtccagtttgcagcaaatcttcaggagctacgatgatgacatcaactcaatcctcactacttgtggatggtgatgagaccatggaattttatagctatgaccaaaaaactgaaatgacttcatgcactgatattaatcctgaagggagatttttcatgcgcacgagcttctgggtaaatattttatatcagcttgtcttatggtttgaacaccttaatggaagaatagttctaccaagattcctgcaaagattaaaaaggggattggagaatggagtagcaggacagaaggctaaagagaggtgtgtgttgtgttgtgtggtgctctgcggtctggtgttgttttgtgtcttaagtactcttctaattttgcttgggttcaaagcattaggaagaaacaagtacattcaactattgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hemerythrin zf-CHY zf-RING_2 zinc_ribbon_6

Protein Analysis

944

Amino Acids

107.05

Weight (kDa)

6.09

Isoelectric Point (pI)

49.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014789)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g05930 FvH4_7g05930 FvH4_7g05930
malus_domestica	MD07G1068200.v1.1
prunus_persica	Prupe.2G085600_v2.0.a1
pyrus_communis	pycom07g05230
rosa_chinensis	RchiOBHm_Chr1g0333131
rosa_laevigata	RLG00000029624
rosa_multiflora	Rmu_sc0007432.1_g000001
rosa_roxburghii	Rroxscaffold_4G00317770
rosa_rugosa	Rorug01G0107300 Rorug01G0107400
rosa_samantha	Rh1AG130600 Rh1BG099700 Rh1CG124400 Rh1DG135900
rosa_wichuraiana	Rw1G010240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2153
Acc16I	TGCGCA	1 cut(s)	2576
Acc36I	ACCTGC	1 cut(s)	1003
AccB1I	GGYRCC	1 cut(s)	1322
AccB7I	CCANNNNNTGG	3 cut(s)	1360, 1451, 2005
AccI	GTMKAC	1 cut(s)	2157
AccII	CGCG	1 cut(s)	1762
AciI	CCGC	5 cut(s)	335, 1673, 1762, 1953, 2745
AclI	AACGTT	1 cut(s)	1877
AcoI	YGGCCR	2 cut(s)	1442, 2356
AcsI	RAATTY	6 cut(s)	2, 420, 480, 587, 808, 2501
AcuI	CTGAAG	4 cut(s)	1088, 1539, 2421, 2577
AfaI	GTAC	9 cut(s)	128, 150, 669, 1312, 1352, 1421, 1708, 2773, 2819
AfiI	CCNNNNNNNGG	5 cut(s)	655, 1048, 1360, 1451, 2005
AflII	CTTAAG	2 cut(s)	136, 2767
AflIII	ACRYGT	1 cut(s)	1416
AhlI	ACTAGT	1 cut(s)	1787
AjnI	CCWGG	4 cut(s)	83, 185, 1422, 2271
AloI	GAACNNNNNNTCC	2 cut(s)	2628, 2660
Alw21I	GWGCWC	6 cut(s)	501, 1153, 1416, 1459, 1479, 2742
Alw26I	GTCTC	3 cut(s)	305, 1194, 2486
AlwNI	CAGNNNCTG	3 cut(s)	124, 584, 1517
AoxI	GGCC	4 cut(s)	1032, 1442, 2197, 2356
ApoI	RAATTY	6 cut(s)	2, 420, 480, 587, 808, 2501
ArsI	GACNNNNNNTTYG	2 cut(s)	1204, 1236
AseI	ATTAAT	2 cut(s)	372, 2550
Asp700I	GAANNNNTTC	2 cut(s)	453, 1098
AspLEI	GCGC	3 cut(s)	560, 643, 2577
AspS9I	GGNCC	1 cut(s)	2197
AsuHPI	GGTGA	6 cut(s)	175, 933, 1721, 1863, 2269, 2498
AsuII	TTCGAA	2 cut(s)	682, 1375
AsuNHI	GCTAGC	1 cut(s)	88
BaeGI	GKGCMC	1 cut(s)	1327
BalI	TGGCCA	2 cut(s)	1444, 2358
BanI	GGYRCC	1 cut(s)	1322
BanII	GRGCYC	1 cut(s)	1153
BarI	GAAGNNNNNNTAC	2 cut(s)	651, 683
BauI	CACGAG	1 cut(s)	2578
Bbv12I	GWGCWC	6 cut(s)	501, 1153, 1416, 1459, 1479, 2742
BbvCI	CCTCAGC	1 cut(s)	444
BccI	CCATC	7 cut(s)	184, 952, 1396, 1579, 1734, 2242, 2477
BceAI	ACGGC	1 cut(s)	1026
BciT130I	CCWGG	4 cut(s)	85, 187, 1424, 2273
BciVI	GTATCC	3 cut(s)	282, 1191, 1582
BclI	TGATCA	3 cut(s)	616, 1237, 1738
BcoDI	GTCTC	3 cut(s)	305, 1194, 2486
BcuI	ACTAGT	1 cut(s)	1787
BfaI	CTAG	9 cut(s)	89, 882, 915, 1058, 1689, 1788, 1859, 1940, 2285
BfmI	CTRYAG	3 cut(s)	465, 1509, 1821
BfrI	CTTAAG	2 cut(s)	136, 2767
BfuAI	ACCTGC	1 cut(s)	1003
BfuI	GTATCC	3 cut(s)	282, 1191, 1582
BglII	AGATCT	1 cut(s)	1316
BlpI	GCTNAGC	1 cut(s)	1806
BmcAI	AGTACT	1 cut(s)	2773
Bme1390I	CCNGG	4 cut(s)	85, 187, 1424, 2273
BmgT120I	GGNCC	1 cut(s)	2197
BmiI	GGNNCC	1 cut(s)	1324
BmrFI	CCNGG	4 cut(s)	85, 187, 1424, 2273
BmrI	ACTGGG	1 cut(s)	1511
BmsI	GCATC	9 cut(s)	60, 130, 307, 569, 729, 730, 851, 1246, 1786
BmtI	GCTAGC	1 cut(s)	92
BmuI	ACTGGG	1 cut(s)	1511
BpmI	CTGGAG	2 cut(s)	381, 822
Bpu10I	CCTNAGC	1 cut(s)	444
Bpu1102I	GCTNAGC	1 cut(s)	1806
Bpu14I	TTCGAA	2 cut(s)	682, 1375
BpuEI	CTTGAG	3 cut(s)	712, 1307, 1454
BsaBI	GATNNNNATC	1 cut(s)	2550
BsaI	GGTCTC	1 cut(s)	2486
BsaJI	CCNNGG	5 cut(s)	83, 770, 1541, 2200, 2496
Bsc4I	CCNNNNNNNGG	5 cut(s)	655, 1048, 1360, 1451, 2005
Bse1I	ACTGG	8 cut(s)	390, 861, 991, 1506, 1714, 1799, 2060, 2420
Bse3DI	GCAATG	3 cut(s)	1194, 2098, 2314
Bse8I	GATNNNNATC	1 cut(s)	2550
BseBI	CCWGG	4 cut(s)	85, 187, 1424, 2273
BseDI	CCNNGG	5 cut(s)	83, 770, 1541, 2200, 2496
BseGI	GGATG	6 cut(s)	51, 195, 1573, 2021, 2253, 2488
BseJI	GATNNNNATC	1 cut(s)	2550
BseLI	CCNNNNNNNGG	5 cut(s)	655, 1048, 1360, 1451, 2005
BseMI	GCAATG	3 cut(s)	1194, 2098, 2314
BseMII	CTCAG	6 cut(s)	21, 435, 1310, 1554, 1820, 2408
BseNI	ACTGG	8 cut(s)	390, 861, 991, 1506, 1714, 1799, 2060, 2420
BseRI	GAGGAG	1 cut(s)	1487
BseSI	GKGCMC	1 cut(s)	1327
BsgI	GTGCAG	3 cut(s)	881, 981, 1539
Bsh1236I	CGCG	1 cut(s)	1762
BshFI	GGCC	4 cut(s)	1034, 1444, 2199, 2358
BshNI	GGYRCC	1 cut(s)	1322
BsiHKAI	GWGCWC	6 cut(s)	501, 1153, 1416, 1459, 1479, 2742
BsiSI	CCGG	1 cut(s)	1184
BslFI	GGGAC	2 cut(s)	1519, 1878
BslI	CCNNNNNNNGG	5 cut(s)	655, 1048, 1360, 1451, 2005
BsmAI	GTCTC	3 cut(s)	305, 1194, 2486
BsmFI	GGGAC	2 cut(s)	1519, 1878
BsmI	GAATGC	1 cut(s)	1646
BsnI	GGCC	4 cut(s)	1034, 1444, 2199, 2358
Bso31I	GGTCTC	1 cut(s)	2486
Bsp119I	TTCGAA	2 cut(s)	682, 1375
Bsp1286I	GDGCHC	7 cut(s)	501, 1153, 1327, 1416, 1459, 1479, 2742
Bsp1407I	TGTACA	1 cut(s)	126
Bsp143I	GATC	7 cut(s)	226, 616, 1237, 1316, 1488, 1738, 1885
Bsp1720I	GCTNAGC	1 cut(s)	1806
Bsp19I	CCATGG	3 cut(s)	770, 1541, 2496
BspACI	CCGC	5 cut(s)	335, 1673, 1762, 1953, 2745
BspANI	GGCC	4 cut(s)	1034, 1444, 2199, 2358
BspCNI	CTCAG	6 cut(s)	20, 436, 1309, 1555, 1819, 2407
BspFNI	CGCG	1 cut(s)	1762
BspHI	TCATGA	1 cut(s)	1888
BspLI	GGNNCC	1 cut(s)	1324
BspMAI	CTGCAG	1 cut(s)	469
BspMI	ACCTGC	1 cut(s)	1003
BspOI	GCTAGC	1 cut(s)	92
BspQI	GCTCTTC	2 cut(s)	9, 1422
BspT104I	TTCGAA	2 cut(s)	682, 1375
BspT107I	GGYRCC	1 cut(s)	1322
BspTI	CTTAAG	2 cut(s)	136, 2767
BspTNI	GGTCTC	1 cut(s)	2486
BsrDI	GCAATG	3 cut(s)	1194, 2098, 2314
BsrGI	TGTACA	1 cut(s)	126
BsrI	ACTGG	8 cut(s)	390, 861, 991, 1506, 1714, 1799, 2060, 2420
BssECI	CCNNGG	5 cut(s)	83, 770, 1541, 2200, 2496
BssMI	GATC	7 cut(s)	226, 616, 1237, 1316, 1488, 1738, 1885
BssSI	CACGAG	1 cut(s)	2578
BssT1I	CCWWGG	4 cut(s)	770, 1541, 2200, 2496
Bst2BI	CACGAG	1 cut(s)	2578
Bst2UI	CCWGG	4 cut(s)	85, 187, 1424, 2273
Bst4CI	ACNGT	9 cut(s)	437, 454, 1088, 1662, 1869, 1900, 1962, 2165, 2405
Bst6I	CTCTTC	4 cut(s)	9, 333, 1422, 2781
BstAFI	CTTAAG	2 cut(s)	136, 2767
BstAPI	GCANNNNNTGC	3 cut(s)	2181, 2229, 2238
BstAUI	TGTACA	1 cut(s)	126
BstBI	TTCGAA	2 cut(s)	682, 1375
BstC8I	GCNNGC	7 cut(s)	21, 90, 214, 1362, 1913, 1948, 2377
BstDEI	CTNAG	9 cut(s)	7, 444, 1079, 1296, 1394, 1563, 1634, 1806, 2394
BstDSI	CCRYGG	3 cut(s)	770, 1541, 2496
BstF5I	GGATG	6 cut(s)	51, 195, 1573, 2021, 2253, 2488
BstFNI	CGCG	1 cut(s)	1762
BstHHI	GCGC	3 cut(s)	560, 643, 2577
BstKTI	GATC	7 cut(s)	229, 619, 1240, 1319, 1491, 1741, 1888
BstMAI	GTCTC	3 cut(s)	305, 1194, 2486
BstMBI	GATC	7 cut(s)	226, 616, 1237, 1316, 1488, 1738, 1885
BstNI	CCWGG	4 cut(s)	85, 187, 1424, 2273
BstNSI	RCATGY	4 cut(s)	430, 826, 1420, 2227
BstSCI	CCNGG	4 cut(s)	83, 185, 1422, 2271
BstSFI	CTRYAG	3 cut(s)	465, 1509, 1821
BstSLI	GKGCMC	1 cut(s)	1327
BstUI	CGCG	1 cut(s)	1762
BstX2I	RGATCY	1 cut(s)	1316
BstYI	RGATCY	1 cut(s)	1316
BsuI	GTATCC	3 cut(s)	282, 1191, 1582
BsuRI	GGCC	4 cut(s)	1034, 1444, 2199, 2358
BtgI	CCRYGG	3 cut(s)	770, 1541, 2496
BtsCI	GGATG	6 cut(s)	51, 195, 1573, 2021, 2253, 2488
BtsI	GCAGTG	3 cut(s)	474, 1839, 2218
BtsIMutI	CAGTG	9 cut(s)	474, 854, 984, 1062, 1839, 1905, 2161, 2218, 2541
BveI	ACCTGC	1 cut(s)	1003
Cac8I	GCNNGC	7 cut(s)	21, 90, 214, 1362, 1913, 1948, 2377
CaiI	CAGNNNCTG	3 cut(s)	124, 584, 1517
CciI	TCATGA	1 cut(s)	1888
CfoI	GCGC	3 cut(s)	560, 643, 2577
Cfr13I	GGNCC	1 cut(s)	2197
Csp6I	GTAC	9 cut(s)	127, 149, 668, 1311, 1351, 1420, 1707, 2772, 2818
CspCI	CAANNNNNGTGG	2 cut(s)	1815, 1850
CviQI	GTAC	9 cut(s)	127, 149, 668, 1311, 1351, 1420, 1707, 2772, 2818
DdeI	CTNAG	9 cut(s)	7, 444, 1079, 1296, 1394, 1563, 1634, 1806, 2394
DpnI	GATC	7 cut(s)	228, 618, 1239, 1318, 1490, 1740, 1887
DpnII	GATC	7 cut(s)	226, 616, 1237, 1316, 1488, 1738, 1885
DraI	TTTAAA	3 cut(s)	552, 636, 1021
DrdI	GACNNNNNNGTC	1 cut(s)	2153
DseDI	GACNNNNNNGTC	1 cut(s)	2153
EaeI	YGGCCR	2 cut(s)	1442, 2356
Eam1104I	CTCTTC	4 cut(s)	9, 333, 1422, 2781
EarI	CTCTTC	4 cut(s)	9, 333, 1422, 2781
Ecl136II	GAGCTC	1 cut(s)	1151
Eco130I	CCWWGG	4 cut(s)	770, 1541, 2200, 2496
Eco24I	GRGCYC	1 cut(s)	1153
Eco31I	GGTCTC	1 cut(s)	2486
Eco32I	GATATC	1 cut(s)	850
Eco53kI	GAGCTC	1 cut(s)	1151
Eco57I	CTGAAG	4 cut(s)	1088, 1539, 2421, 2577
EcoICRI	GAGCTC	1 cut(s)	1151
EcoO109I	RGGNCCY	1 cut(s)	2197
EcoRII	CCWGG	4 cut(s)	83, 185, 1422, 2271
EcoRV	GATATC	1 cut(s)	850
EcoT14I	CCWWGG	4 cut(s)	770, 1541, 2200, 2496
EcoT22I	ATGCAT	2 cut(s)	1261, 2370
EcoT38I	GRGCYC	1 cut(s)	1153
ErhI	CCWWGG	4 cut(s)	770, 1541, 2200, 2496
FaqI	GGGAC	2 cut(s)	1519, 1878
FauNDI	CATATG	1 cut(s)	253
FbaI	TGATCA	3 cut(s)	616, 1237, 1738
FblI	GTMKAC	1 cut(s)	2157
FokI	GGATG	6 cut(s)	38, 202, 1580, 2008, 2260, 2495
FriOI	GRGCYC	1 cut(s)	1153
FspAI	RTGCGCAY	1 cut(s)	2576
FspBI	CTAG	9 cut(s)	89, 882, 915, 1058, 1689, 1788, 1859, 1940, 2285
FspI	TGCGCA	1 cut(s)	2576
GlaI	GCGC	3 cut(s)	559, 642, 2576
GsuI	CTGGAG	2 cut(s)	381, 822
HaeIII	GGCC	4 cut(s)	1034, 1444, 2199, 2358
HapII	CCGG	1 cut(s)	1184
HhaI	GCGC	3 cut(s)	560, 643, 2577
Hin6I	GCGC	3 cut(s)	558, 641, 2575
HinP1I	GCGC	3 cut(s)	558, 641, 2575
HincII	GTYRAC	1 cut(s)	1665
HindII	GTYRAC	1 cut(s)	1665
HindIII	AAGCTT	6 cut(s)	21, 38, 161, 1370, 1654, 2343
HinfI	GANTC	4 cut(s)	1067, 1193, 2337, 2655
HpaII	CCGG	1 cut(s)	1184
HphI	GGTGA	6 cut(s)	175, 933, 1721, 1863, 2269, 2498
Hpy166II	GTNNAC	5 cut(s)	1665, 1853, 1965, 2158, 2260
Hpy188I	TCNGA	4 cut(s)	726, 847, 1072, 2397
Hpy8I	GTNNAC	5 cut(s)	1665, 1853, 1965, 2158, 2260
HpyAV	CCTTC	6 cut(s)	188, 582, 1603, 2188, 2552, 2698
HpyCH4III	ACNGT	9 cut(s)	437, 454, 1088, 1662, 1869, 1900, 1962, 2165, 2405
HpyCH4IV	ACGT	1 cut(s)	1877
HpyF3I	CTNAG	9 cut(s)	7, 444, 1079, 1296, 1394, 1563, 1634, 1806, 2394
HpySE526I	ACGT	1 cut(s)	1877
HspAI	GCGC	3 cut(s)	558, 641, 2575
Ksp22I	TGATCA	3 cut(s)	616, 1237, 1738
Kzo9I	GATC	7 cut(s)	226, 616, 1237, 1316, 1488, 1738, 1885
LguI	GCTCTTC	2 cut(s)	9, 1422
LmnI	GCTCC	5 cut(s)	611, 841, 1454, 1474, 2441
LweI	GCATC	9 cut(s)	60, 130, 307, 569, 729, 730, 851, 1246, 1786
MaeI	CTAG	9 cut(s)	89, 882, 915, 1058, 1689, 1788, 1859, 1940, 2285
MaeII	ACGT	1 cut(s)	1877
MalI	GATC	7 cut(s)	228, 618, 1239, 1318, 1490, 1740, 1887
MboI	GATC	7 cut(s)	226, 616, 1237, 1316, 1488, 1738, 1885
MfeI	CAATTG	2 cut(s)	205, 2233
MflI	RGATCY	1 cut(s)	1316
MhlI	GDGCHC	7 cut(s)	501, 1153, 1327, 1416, 1459, 1479, 2742
MlsI	TGGCCA	2 cut(s)	1444, 2358
MluNI	TGGCCA	2 cut(s)	1444, 2358
Mox20I	TGGCCA	2 cut(s)	1444, 2358
Mph1103I	ATGCAT	2 cut(s)	1261, 2370
MroXI	GAANNNNTTC	2 cut(s)	453, 1098
MscI	TGGCCA	2 cut(s)	1444, 2358
MslI	CAYNNNNRTG	6 cut(s)	188, 504, 648, 1158, 2246, 2631
Msp20I	TGGCCA	2 cut(s)	1444, 2358
MspA1I	CMGCKG	2 cut(s)	224, 581
MspCI	CTTAAG	2 cut(s)	136, 2767
MspI	CCGG	1 cut(s)	1184
MspR9I	CCNGG	4 cut(s)	85, 187, 1424, 2273
MunI	CAATTG	2 cut(s)	205, 2233
Mva1269I	GAATGC	1 cut(s)	1646
MvaI	CCWGG	4 cut(s)	85, 187, 1424, 2273
MvnI	CGCG	1 cut(s)	1762
NcoI	CCATGG	3 cut(s)	770, 1541, 2496
NdeI	CATATG	1 cut(s)	253
NdeII	GATC	7 cut(s)	226, 616, 1237, 1316, 1488, 1738, 1885
NheI	GCTAGC	1 cut(s)	88
NlaIV	GGNNCC	1 cut(s)	1324
NmeAIII	GCCGAG	2 cut(s)	181, 2210
NmuCI	GTSAC	5 cut(s)	102, 939, 1043, 1220, 1869
NsbI	TGCGCA	1 cut(s)	2576
NsiI	ATGCAT	2 cut(s)	1261, 2370
NspI	RCATGY	4 cut(s)	430, 826, 1420, 2227
NspV	TTCGAA	2 cut(s)	682, 1375
PagI	TCATGA	1 cut(s)	1888
PciI	ACATGT	1 cut(s)	1416
PciSI	GCTCTTC	2 cut(s)	9, 1422
PctI	GAATGC	1 cut(s)	1646
PdmI	GAANNNNTTC	2 cut(s)	453, 1098
PfeI	GAWTC	4 cut(s)	1067, 1193, 2337, 2655
PflMI	CCANNNNNTGG	3 cut(s)	1360, 1451, 2005
PscI	ACATGT	1 cut(s)	1416
PshBI	ATTAAT	2 cut(s)	372, 2550
Psp124BI	GAGCTC	1 cut(s)	1153
Psp1406I	AACGTT	1 cut(s)	1877
Psp6I	CCWGG	4 cut(s)	83, 185, 1422, 2271
PspGI	CCWGG	4 cut(s)	83, 185, 1422, 2271
PspN4I	GGNNCC	1 cut(s)	1324
PspPI	GGNCC	1 cut(s)	2197
PstI	CTGCAG	1 cut(s)	469
PstNI	CAGNNNCTG	3 cut(s)	124, 584, 1517
PsuI	RGATCY	1 cut(s)	1316
PvuII	CAGCTG	2 cut(s)	224, 581
RsaI	GTAC	9 cut(s)	128, 150, 669, 1312, 1352, 1421, 1708, 2773, 2819
RsaNI	GTAC	9 cut(s)	127, 149, 668, 1311, 1351, 1420, 1707, 2772, 2818
RseI	CAYNNNNRTG	6 cut(s)	188, 504, 648, 1158, 2246, 2631
SacI	GAGCTC	1 cut(s)	1153
SapI	GCTCTTC	2 cut(s)	9, 1422
Sau3AI	GATC	7 cut(s)	226, 616, 1237, 1316, 1488, 1738, 1885
Sau96I	GGNCC	1 cut(s)	2197
ScaI	AGTACT	1 cut(s)	2773
ScrFI	CCNGG	4 cut(s)	85, 187, 1424, 2273
SduI	GDGCHC	7 cut(s)	501, 1153, 1327, 1416, 1459, 1479, 2742
SfaNI	GCATC	9 cut(s)	60, 130, 307, 569, 729, 730, 851, 1246, 1786
SfcI	CTRYAG	3 cut(s)	465, 1509, 1821
SfuI	TTCGAA	2 cut(s)	682, 1375
SmiMI	CAYNNNNRTG	6 cut(s)	188, 504, 648, 1158, 2246, 2631
SmlI	CTYRAG	5 cut(s)	136, 691, 1286, 1433, 2767
SmoI	CTYRAG	5 cut(s)	136, 691, 1286, 1433, 2767
SpeI	ACTAGT	1 cut(s)	1787
SsiI	CCGC	5 cut(s)	335, 1673, 1762, 1953, 2745
SspI	AATATT	6 cut(s)	1098, 1270, 2053, 2114, 2125, 2596
SspMI	CTAG	9 cut(s)	89, 882, 915, 1058, 1689, 1788, 1859, 1940, 2285
SstI	GAGCTC	1 cut(s)	1153
StyD4I	CCNGG	4 cut(s)	83, 185, 1422, 2271
StyI	CCWWGG	4 cut(s)	770, 1541, 2200, 2496
TaaI	ACNGT	9 cut(s)	437, 454, 1088, 1662, 1869, 1900, 1962, 2165, 2405
TaiI	ACGT	1 cut(s)	1880
TaqI	TCGA	5 cut(s)	229, 543, 682, 1375, 1882
TatI	WGTACW	3 cut(s)	126, 2771, 2817
TauI	GCSGC	1 cut(s)	1956
TfiI	GAWTC	4 cut(s)	1067, 1193, 2337, 2655
TscAI	CASTG	9 cut(s)	474, 861, 991, 1069, 1839, 1905, 2168, 2225, 2548
TseFI	GTSAC	5 cut(s)	102, 939, 1043, 1220, 1869
Tsp45I	GTSAC	5 cut(s)	102, 939, 1043, 1220, 1869
TspGWI	ACGGA	1 cut(s)	1588
TspRI	CASTG	9 cut(s)	474, 861, 991, 1069, 1839, 1905, 2168, 2225, 2548
Van91I	CCANNNNNTGG	3 cut(s)	1360, 1451, 2005
Vha464I	CTTAAG	2 cut(s)	136, 2767
VspI	ATTAAT	2 cut(s)	372, 2550
XapI	RAATTY	6 cut(s)	2, 420, 480, 587, 808, 2501
XbaI	TCTAGA	2 cut(s)	1057, 2284
XceI	RCATGY	4 cut(s)	430, 826, 1420, 2227
XcmI	CCANNNNNNNNNTGG	1 cut(s)	64
XmiI	GTMKAC	1 cut(s)	2157
XmnI	GAANNNNTTC	2 cut(s)	453, 1098
XspI	CTAG	9 cut(s)	89, 882, 915, 1058, 1689, 1788, 1859, 1940, 2285
ZrmI	AGTACT	1 cut(s)	2773
Zsp2I	ATGCAT	2 cut(s)	1261, 2370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.