pycom07g06010

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0014793
Physical Location & Seq
Forward (+)
5328619 .. 5330436
1818 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g06010.1

Sequence Viewer

Length: 1818 bp
ATGAACTCCCAAGAATTATGGGTCCATGTTTATGGGAGACTCAAATCATGCAAATCAATAAGCACAACACAACTCAAACAGTTGCATTCATTTCTCATCAAAACAAGGCCTCTGCCTCTCAAATATCCCAACCTCATTTCTTCTCCTCCATCTCCTCCTCACAGACACAAACACTCACATTCCACTCACATCCTCTCTTTCTTAAACCACCTGGAAAAGCCAGACCTCTGCCTCTCCCTCTACAACGCCATCATCCAAGGCCTCCCTTCAAATCCCACCACCAAAACAGCCTCCCTTTTCCAACTGTTTGAATTGCTTGAACACATGCTTGCCAATGACATCCTTCCTGACCACTACACCGTCCCCTCTGTTCTCAAAGCGTGCGCGCAGTTGCGTGCGCTGAGAGAGGGGCAGCAGATTCACGCCTACGCTATCAAGACCGGGCTTGTTTTGTCCAATGTTTACGTCAATAACACTCTTATGAGGGTTTATGCTGTTTGTGGGGTTATGAAATGGGTCCGGATGGTGTTTGATGAAAGTCCTCAGAGGGACTTGGTTTCGTGGACTACGCTTCTTCAGGCTTATGTTAAAATGGGGTTTCCGAGAGAAGGAGTTGAAGCGTTTTTTAGGATGTGTGACGCAGAGATGAGGGCGGATGAGATGACGTTGGTCATTGTTCTCTCTGCTTGCTCGAAGTTGGGAGACTTGAGCTTGGGTAGGAAGATCAATGGATACATTTACGATAATGGGGTATGCCGAGATGTTTTTATTGGCAATGCGTTGGTCGATATGTACTTGAAGTGTGGGGATGCCGACTTTGCACGTAAAGTCTTTAATGAGATGCCTGTGAGAAATGTGGTTTCCTGGAATTCGATGATATCGGGTTTAGCACACCAAGGGAAATTTAAGGAGGCGTTGGACGTGTTCCAGGAGATGCAAAGAATGGGTCTTGAGCCAGATGATGTTACTTTAGTTGGCGTTTTGAATTCGTGCGCGAATCTTGGAGTGCTCAAGATGGGGGAGTGGGTACATGCTTATGTTGATAGAAATCAGATCGAGGCTGATGGGTTTATAGGAAATGCGCTTGTGGATATGTATGCTAAGTGTGGAAGTATAGACCGAGCCTTTAGAGTTTTTCAACGCATGAATCGCAGAGACGTATATTCATATACTGCCATGATTGTTGGGTTAGCTATGCATGGGGAGGTAGAGATGGCATTGGATATATTTGCTGAAATGCCTAGAGTGGGCATTGAACCGGATGAGGTAACATTTATCGGAGTCCTTGCAGCATGTAGTCATGGAGGACTGGTGGCAGAGGGTCATAAGTATTTTAGGGAGATGTCAAGTGTGTACAAGCTCAGACCTCAGACAGAGCATTATGGCTGCATGGTTGACCTGTTAGGCCGTGCCGGGTTAATAAATGAGGCAGAGGAGTTTGTTGAAAACATGCCAATTGAGCCTGATGCCTTTGTTTGGGGCGCTCTATTGGGAGCCTGCAGGATCCATGGGAAAGTAGAGCTTGCTGAAAGTGTGATGAAGAAACTACTGAAGGTAGAGCCCGAGAGAGATGGTGCGTATGTGCTCATGTCAAATATATATTCCTCTGCAAATAGATGGAGGGATGCAGTGAAGTTGAGACGGGCGATGAAGGGAAAGAACATGAAGAAAACTCCCGGGTGTAGTTCAATCGAACTTGATGGTATTGTTCATGAATTCAGAAAGGGTGACAAATCACATAAAAGAAGCAAAGAAATATACAAATTGCTAGAAGAGATTATGAGCCACATAAAGAACCATGAGCTTTTGGCACACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

606

Amino Acids

68.33

Weight (kDa)

8.09

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 284 - 333 1e-14 PPR repeat family
PPR_1 PF12854 284 - 313 5.5e-06 PPR repeat
PPR PF01535 287 - 317 3e-10 PPR repeat
PPR_2 PF13041 385 - 433 9.3e-11 PPR repeat family
PPR PF01535 388 - 418 5.5e-06 PPR repeat
E_motif PF20431 503 - 565 1.6e-20 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014793)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g07400
malus_domestica MD02G1240700.v1.1 MD07G1076300.v1.1
prunus_persica Prupe.2G097100_v2.0.a1
pyrus_communis pycom02g20580 pycom07g06010
rosa_chinensis RchiOBHm_Chr1g0337001
rosa_laevigata RLG00000029313
rosa_multiflora Rmu_sc0009742.1_g000003
rosa_roxburghii Rroxscaffold_4G00315060
rosa_rugosa Rorug01G0129900 Rorug01G0130000 Rorug01G0130200
rosa_samantha Rh1AG150700 Rh1BG119100 Rh1CG141900
rosa_wichuraiana Rw1G012320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 386, 995
AccIII TCCGGA 1 cut(s) 519
AciI CCGC 1 cut(s) 653
AclWI GGATC 2 cut(s) 1498, 1511
AcsI RAATTY 4 cut(s) 868, 902, 985, 1715
AcuI CTGAAG 2 cut(s) 560, 1571
AfaI GTAC 3 cut(s) 794, 1029, 1355
AfiI CCNNNNNNNGG 3 cut(s) 608, 1247, 1476
AflIII ACRYGT 1 cut(s) 921
AjiI CACGTC 1 cut(s) 922
AjnI CCWGG 3 cut(s) 210, 863, 927
AluBI AGCT 5 cut(s) 711, 1193, 1360, 1522, 1804
AluI AGCT 5 cut(s) 711, 1193, 1360, 1522, 1804
Alw21I GWGCWC 2 cut(s) 1011, 1587
Alw26I GTCTC 4 cut(s) 31, 696, 1149, 1633
AlwI GGATC 2 cut(s) 1498, 1511
Ama87I CYCGRG 2 cut(s) 1562, 1676
Aor13HI TCCGGA 1 cut(s) 519
AoxI GGCC 3 cut(s) 107, 259, 1405
ApeKI GCWGC 3 cut(s) 412, 1289, 1386
ApoI RAATTY 4 cut(s) 868, 902, 985, 1715
ArsI GACNNNNNNTTYG 2 cut(s) 931, 963
AspLEI GCGC 6 cut(s) 386, 388, 400, 995, 1084, 1484
AspS9I GGNCC 2 cut(s) 22, 517
AsuC2I CCSGG 4 cut(s) 442, 1414, 1677, 1678
AsuHPI GGTGA 1 cut(s) 1739
AvaI CYCGRG 2 cut(s) 1562, 1676
AvaII GGWCC 2 cut(s) 22, 517
BamHI GGATCC 1 cut(s) 1503
BanII GRGCYC 1 cut(s) 1563
Bbv12I GWGCWC 2 cut(s) 1011, 1587
BbvI GCAGC 3 cut(s) 424, 1301, 1373
BccI CCATC 9 cut(s) 157, 257, 517, 1009, 1058, 1207, 1565, 1611, 1694
BceAI ACGGC 1 cut(s) 1392
BciT130I CCWGG 3 cut(s) 212, 865, 929
BciVI GTATCC 1 cut(s) 725
BcnI CCSGG 4 cut(s) 442, 1414, 1677, 1678
BcoDI GTCTC 4 cut(s) 31, 696, 1149, 1633
BfaI CTAG 2 cut(s) 1242, 1769
BfmI CTRYAG 1 cut(s) 1498
BfoI RGCGCY 1 cut(s) 1485
BfuI GTATCC 1 cut(s) 725
BisI GCNGC 3 cut(s) 413, 1290, 1387
BlsI GCNGC 3 cut(s) 414, 1291, 1388
Bme1390I CCNGG 7 cut(s) 212, 442, 865, 929, 1414, 1677, 1678
Bme18I GGWCC 2 cut(s) 22, 517
BmeT110I CYCGRG 2 cut(s) 1562, 1676
BmgBI CACGTC 1 cut(s) 922
BmgT120I GGNCC 2 cut(s) 22, 517
BmiI GGNNCC 4 cut(s) 23, 518, 1495, 1505
BmrFI CCNGG 7 cut(s) 212, 442, 865, 929, 1414, 1677, 1678
BmsI GCATC 5 cut(s) 799, 831, 924, 1456, 1615
BoxI GACNNNNGTC 1 cut(s) 668
BpuEI CTTGAG 3 cut(s) 727, 971, 995
BpuMI CCSGG 4 cut(s) 442, 1414, 1677, 1678
BsaAI YACGTR 1 cut(s) 824
BsaBI GATNNNNATC 1 cut(s) 1047
BsaJI CCNNGG 4 cut(s) 256, 895, 1507, 1676
BsaWI WCCGGW 2 cut(s) 519, 1258
BsaXI ACNNNNNCTCC 2 cut(s) 1296, 1326
Bsc4I CCNNNNNNNGG 3 cut(s) 608, 1247, 1476
Bse1I ACTGG 1 cut(s) 1314
Bse3DI GCAATG 1 cut(s) 781
Bse8I GATNNNNATC 1 cut(s) 1047
BseAI TCCGGA 1 cut(s) 519
BseBI CCWGG 3 cut(s) 212, 865, 929
BseDI CCNNGG 4 cut(s) 256, 895, 1507, 1676
BseGI GGATG 9 cut(s) 189, 252, 339, 528, 636, 661, 814, 1267, 1630
BseJI GATNNNNATC 1 cut(s) 1047
BseLI CCNNNNNNNGG 3 cut(s) 608, 1247, 1476
BseMI GCAATG 1 cut(s) 781
BseMII CTCAG 4 cut(s) 392, 557, 1375, 1382
BseNI ACTGG 1 cut(s) 1314
BsePI GCGCGC 1 cut(s) 384
BseRI GAGGAG 4 cut(s) 135, 144, 147, 1448
BseXI GCAGC 3 cut(s) 424, 1301, 1373
Bsh1236I CGCG 2 cut(s) 386, 995
BshFI GGCC 3 cut(s) 109, 261, 1407
BsiHKAI GWGCWC 2 cut(s) 1011, 1587
BsiHKCI CYCGRG 2 cut(s) 1562, 1676
BsiSI CCGG 5 cut(s) 441, 520, 1259, 1413, 1677
BslFI GGGAC 2 cut(s) 347, 563
BslI CCNNNNNNNGG 3 cut(s) 608, 1247, 1476
BsmAI GTCTC 4 cut(s) 31, 696, 1149, 1633
BsmBI CGTCTC 2 cut(s) 1149, 1633
BsmFI GGGAC 2 cut(s) 347, 563
BsmI GAATGC 1 cut(s) 85
BsnI GGCC 3 cut(s) 109, 261, 1407
BsoBI CYCGRG 2 cut(s) 1562, 1676
Bsp1286I GDGCHC 3 cut(s) 1011, 1563, 1587
Bsp13I TCCGGA 1 cut(s) 519
Bsp1407I TGTACA 1 cut(s) 1353
Bsp143I GATC 3 cut(s) 723, 1053, 1503
Bsp19I CCATGG 1 cut(s) 1507
BspACI CCGC 1 cut(s) 653
BspANI GGCC 3 cut(s) 109, 261, 1407
BspCNI CTCAG 4 cut(s) 393, 556, 1374, 1381
BspEI TCCGGA 1 cut(s) 519
BspFNI CGCG 2 cut(s) 386, 995
BspHI TCATGA 1 cut(s) 1711
BspLI GGNNCC 4 cut(s) 23, 518, 1495, 1505
BspMAI CTGCAG 1 cut(s) 1502
BspPI GGATC 2 cut(s) 1498, 1511
BsrDI GCAATG 1 cut(s) 781
BsrGI TGTACA 1 cut(s) 1353
BsrI ACTGG 1 cut(s) 1314
BssECI CCNNGG 4 cut(s) 256, 895, 1507, 1676
BssHII GCGCGC 1 cut(s) 384
BssMI GATC 3 cut(s) 723, 1053, 1503
BssT1I CCWWGG 3 cut(s) 256, 895, 1507
Bst2UI CCWGG 3 cut(s) 212, 865, 929
Bst4CI ACNGT 3 cut(s) 81, 306, 361
Bst6I CTCTTC 1 cut(s) 1767
BstAUI TGTACA 1 cut(s) 1353
BstBAI YACGTR 1 cut(s) 824
BstC8I GCNNGC 7 cut(s) 330, 382, 386, 396, 688, 1498, 1524
BstDEI CTNAG 5 cut(s) 401, 543, 1101, 1361, 1368
BstDSI CCRYGG 1 cut(s) 1507
BstF5I GGATG 9 cut(s) 189, 252, 339, 528, 636, 661, 814, 1267, 1630
BstFNI CGCG 2 cut(s) 386, 995
BstH2I RGCGCY 1 cut(s) 1485
BstHHI GCGC 6 cut(s) 386, 388, 400, 995, 1084, 1484
BstKTI GATC 3 cut(s) 726, 1056, 1506
BstMAI GTCTC 4 cut(s) 31, 696, 1149, 1633
BstMBI GATC 3 cut(s) 723, 1053, 1503
BstMWI GCNNNNNNNGC 3 cut(s) 818, 1149, 1459
BstNI CCWGG 3 cut(s) 212, 865, 929
BstNSI RCATGY 4 cut(s) 328, 1034, 1296, 1453
BstPAI GACNNNNGTC 1 cut(s) 668
BstSCI CCNGG 7 cut(s) 210, 440, 863, 927, 1412, 1675, 1676
BstSFI CTRYAG 1 cut(s) 1498
BstUI CGCG 2 cut(s) 386, 995
BstV1I GCAGC 3 cut(s) 424, 1301, 1373
BstX2I RGATCY 1 cut(s) 1503
BstXI CCANNNNNNTGG 1 cut(s) 32
BstYI RGATCY 1 cut(s) 1503
BsuI GTATCC 1 cut(s) 725
BsuRI GGCC 3 cut(s) 109, 261, 1407
BtgI CCRYGG 1 cut(s) 1507
BtgZI GCGATG 1 cut(s) 1661
BtrI CACGTC 1 cut(s) 922
BtsCI GGATG 9 cut(s) 189, 252, 339, 528, 636, 661, 814, 1267, 1630
BtsI GCAGTG 1 cut(s) 1635
BtsIMutI CAGTG 2 cut(s) 1635, 1813
Cac8I GCNNGC 7 cut(s) 330, 382, 386, 396, 688, 1498, 1524
CciI TCATGA 1 cut(s) 1711
CfoI GCGC 6 cut(s) 386, 388, 400, 995, 1084, 1484
Cfr13I GGNCC 2 cut(s) 22, 517
Cfr9I CCCGGG 1 cut(s) 1676
CseI GACGC 1 cut(s) 647
Csp6I GTAC 3 cut(s) 793, 1028, 1354
CviQI GTAC 3 cut(s) 793, 1028, 1354
DdeI CTNAG 5 cut(s) 401, 543, 1101, 1361, 1368
DpnI GATC 3 cut(s) 725, 1055, 1505
DpnII GATC 3 cut(s) 723, 1053, 1503
Eam1104I CTCTTC 1 cut(s) 1767
EarI CTCTTC 1 cut(s) 1767
EciI GGCGGA 1 cut(s) 668
Eco130I CCWWGG 3 cut(s) 256, 895, 1507
Eco147I AGGCCT 2 cut(s) 109, 261
Eco24I GRGCYC 1 cut(s) 1563
Eco32I GATATC 1 cut(s) 879
Eco47I GGWCC 2 cut(s) 22, 517
Eco57I CTGAAG 2 cut(s) 560, 1571
Eco88I CYCGRG 2 cut(s) 1562, 1676
EcoRI GAATTC 3 cut(s) 868, 985, 1715
EcoRII CCWGG 3 cut(s) 210, 863, 927
EcoRV GATATC 1 cut(s) 879
EcoT14I CCWWGG 3 cut(s) 256, 895, 1507
EcoT22I ATGCAT 1 cut(s) 1200
EcoT38I GRGCYC 1 cut(s) 1563
ErhI CCWWGG 3 cut(s) 256, 895, 1507
Esp3I CGTCTC 2 cut(s) 1149, 1633
FalI AAGNNNNNCTT 2 cut(s) 1506, 1538
FaqI GGGAC 2 cut(s) 347, 563
Fnu4HI GCNGC 3 cut(s) 413, 1290, 1387
FokI GGATG 9 cut(s) 176, 239, 326, 535, 643, 668, 821, 1274, 1637
FriOI GRGCYC 1 cut(s) 1563
Fsp4HI GCNGC 3 cut(s) 413, 1290, 1387
FspBI CTAG 2 cut(s) 1242, 1769
GlaI GCGC 6 cut(s) 385, 387, 399, 994, 1083, 1483
GluI GCNGC 3 cut(s) 413, 1290, 1387
HaeII RGCGCY 1 cut(s) 1485
HaeIII GGCC 3 cut(s) 109, 261, 1407
HapII CCGG 5 cut(s) 441, 520, 1259, 1413, 1677
HgaI GACGC 1 cut(s) 647
HhaI GCGC 6 cut(s) 386, 388, 400, 995, 1084, 1484
Hin6I GCGC 6 cut(s) 384, 386, 398, 993, 1082, 1482
HinP1I GCGC 6 cut(s) 384, 386, 398, 993, 1082, 1482
HincII GTYRAC 1 cut(s) 1396
HindII GTYRAC 1 cut(s) 1396
HinfI GANTC 5 cut(s) 39, 418, 997, 1147, 1281
HpaII CCGG 5 cut(s) 441, 520, 1259, 1413, 1677
HphI GGTGA 1 cut(s) 1739
Hpy166II GTNNAC 4 cut(s) 463, 564, 1354, 1396
Hpy188I TCNGA 7 cut(s) 546, 603, 1053, 1280, 1364, 1371, 1721
Hpy188III TCNNGA 6 cut(s) 347, 436, 520, 950, 1012, 1712
Hpy8I GTNNAC 4 cut(s) 463, 564, 1354, 1396
HpyAV CCTTC 5 cut(s) 276, 353, 602, 1546, 1645
HpyCH4III ACNGT 3 cut(s) 81, 306, 361
HpyCH4IV ACGT 5 cut(s) 465, 665, 823, 921, 1158
HpyF10VI GCNNNNNNNGC 3 cut(s) 818, 1149, 1459
HpyF3I CTNAG 5 cut(s) 401, 543, 1101, 1361, 1368
HpySE526I ACGT 5 cut(s) 465, 665, 823, 921, 1158
HspAI GCGC 6 cut(s) 384, 386, 398, 993, 1082, 1482
Kpn2I TCCGGA 1 cut(s) 519
Kzo9I GATC 3 cut(s) 723, 1053, 1503
LmnI GCTCC 1 cut(s) 1493
Lsp1109I GCAGC 3 cut(s) 424, 1301, 1373
LweI GCATC 5 cut(s) 799, 831, 924, 1456, 1615
MaeI CTAG 2 cut(s) 1242, 1769
MaeII ACGT 5 cut(s) 465, 665, 823, 921, 1158
MaeIII GTNAC 4 cut(s) 635, 964, 1267, 1727
MalI GATC 3 cut(s) 725, 1055, 1505
MboI GATC 3 cut(s) 723, 1053, 1503
MboII GAAGA 6 cut(s) 132, 566, 733, 1552, 1678, 1784
MfeI CAATTG 1 cut(s) 1455
MflI RGATCY 1 cut(s) 1503
MhlI GDGCHC 3 cut(s) 1011, 1563, 1587
MluCI AATT 8 cut(s) 14, 311, 868, 902, 985, 1455, 1715, 1763
MlyI GAGTC 2 cut(s) 33, 1290
MmeI TCCRAC 2 cut(s) 325, 897
Mph1103I ATGCAT 1 cut(s) 1200
MroI TCCGGA 1 cut(s) 519
MseI TTAA 5 cut(s) 203, 588, 834, 906, 1418
MslI CAYNNNNRTG 3 cut(s) 30, 479, 1035
MspI CCGG 5 cut(s) 441, 520, 1259, 1413, 1677
MspR9I CCNGG 7 cut(s) 212, 442, 865, 929, 1414, 1677, 1678
MunI CAATTG 1 cut(s) 1455
Mva1269I GAATGC 1 cut(s) 85
MvaI CCWGG 3 cut(s) 212, 865, 929
MvnI CGCG 2 cut(s) 386, 995
MwoI GCNNNNNNNGC 3 cut(s) 818, 1149, 1459
NciI CCSGG 4 cut(s) 442, 1414, 1677, 1678
NcoI CCATGG 1 cut(s) 1507
NdeII GATC 3 cut(s) 723, 1053, 1503
NlaIV GGNNCC 4 cut(s) 23, 518, 1495, 1505
NmeAIII GCCGAG 1 cut(s) 782
NmuCI GTSAC 2 cut(s) 635, 1727
NsiI ATGCAT 1 cut(s) 1200
NspI RCATGY 4 cut(s) 328, 1034, 1296, 1453
PagI TCATGA 1 cut(s) 1711
PauI GCGCGC 1 cut(s) 384
PceI AGGCCT 2 cut(s) 109, 261
PctI GAATGC 1 cut(s) 85
PfeI GAWTC 3 cut(s) 418, 997, 1147
PfoI TCCNGGA 2 cut(s) 863, 927
PkrI GCNGC 3 cut(s) 414, 1291, 1388
PleI GAGTC 2 cut(s) 33, 1289
PpsI GAGTC 2 cut(s) 33, 1289
Ppu21I YACGTR 1 cut(s) 824
PshAI GACNNNNGTC 1 cut(s) 668
Psp6I CCWGG 3 cut(s) 210, 863, 927
PspGI CCWGG 3 cut(s) 210, 863, 927
PspN4I GGNNCC 4 cut(s) 23, 518, 1495, 1505
PspPI GGNCC 2 cut(s) 22, 517
PstI CTGCAG 1 cut(s) 1502
PsuI RGATCY 1 cut(s) 1503
PteI GCGCGC 1 cut(s) 384
RsaI GTAC 3 cut(s) 794, 1029, 1355
RsaNI GTAC 3 cut(s) 793, 1028, 1354
RseI CAYNNNNRTG 3 cut(s) 30, 479, 1035
SaqAI TTAA 5 cut(s) 203, 588, 834, 906, 1418
SatI GCNGC 3 cut(s) 413, 1290, 1387
Sau3AI GATC 3 cut(s) 723, 1053, 1503
Sau96I GGNCC 2 cut(s) 22, 517
SbfI CCTGCAGG 1 cut(s) 1502
SchI GAGTC 2 cut(s) 33, 1290
ScrFI CCNGG 7 cut(s) 212, 442, 865, 929, 1414, 1677, 1678
SdaI CCTGCAGG 1 cut(s) 1502
SduI GDGCHC 3 cut(s) 1011, 1563, 1587
SfaNI GCATC 5 cut(s) 799, 831, 924, 1456, 1615
SfcI CTRYAG 1 cut(s) 1498
SinI GGWCC 2 cut(s) 22, 517
SmaI CCCGGG 1 cut(s) 1678
SmiMI CAYNNNNRTG 3 cut(s) 30, 479, 1035
SmlI CTYRAG 3 cut(s) 706, 950, 1010
SmoI CTYRAG 3 cut(s) 706, 950, 1010
Sse8387I CCTGCAGG 1 cut(s) 1502
Sse9I AATT 8 cut(s) 14, 311, 868, 902, 985, 1455, 1715, 1763
SseBI AGGCCT 2 cut(s) 109, 261
SsiI CCGC 1 cut(s) 653
SspMI CTAG 2 cut(s) 1242, 1769
StuI AGGCCT 2 cut(s) 109, 261
StyD4I CCNGG 7 cut(s) 210, 440, 863, 927, 1412, 1675, 1676
StyI CCWWGG 3 cut(s) 256, 895, 1507
TaaI ACNGT 3 cut(s) 81, 306, 361
TaiI ACGT 5 cut(s) 468, 668, 826, 924, 1161
TaqI TCGA 5 cut(s) 692, 786, 872, 1056, 1692
TaqII GACCGA 1 cut(s) 1134
TasI AATT 8 cut(s) 14, 311, 868, 902, 985, 1455, 1715, 1763
TatI WGTACW 2 cut(s) 792, 1353
TfiI GAWTC 3 cut(s) 418, 997, 1147
Tru1I TTAA 5 cut(s) 203, 588, 834, 906, 1418
Tru9I TTAA 5 cut(s) 203, 588, 834, 906, 1418
TscAI CASTG 1 cut(s) 1635
TseFI GTSAC 2 cut(s) 635, 1727
TseI GCWGC 3 cut(s) 412, 1289, 1386
Tsp45I GTSAC 2 cut(s) 635, 1727
TspMI CCCGGG 1 cut(s) 1676
TspRI CASTG 1 cut(s) 1635
VpaK11BI GGWCC 2 cut(s) 22, 517
XapI RAATTY 4 cut(s) 868, 902, 985, 1715
XceI RCATGY 4 cut(s) 328, 1034, 1296, 1453
XmaI CCCGGG 1 cut(s) 1676
XspI CTAG 2 cut(s) 1242, 1769
Zsp2I ATGCAT 1 cut(s) 1200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.