RchiOBHm_Chr1g0337001

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0014793
Physical Location & Seq
Forward (+)
28664490 .. 28666782
2293 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56493

Sequence Viewer

Length: 1830 bp
ATGAACTCACAAGAGTTATGGGTGCATGCTTATAGCAGACTCAGATCATGCAAATCAATAAGCATAACTCATCTCAAACAAACCCACACATTTCTCATCAAAACAAGGCCTCTTCCTCTTCCTCTCCCAACCCAACACCTCATCTACCCTAAACTCATTTCTTCTCCTCATCACAACAACAACCTGACCTACATTCTCTCCTTCTTAAACCACTTGGGCAAGCCAGACCTCTGCCTCTACAATGCCATCATCCAAGGCCTCCCTTCCAATCCCACAAACAAAACCACGTCCCTTCTTCAAGTGCTTGAACTACTTCGGCACATGCTCCTCAATGGCCTCCTTCCTGACCACTACACTGTCCCCTCTGTGCTCAAAGCGTGTGCACAGTGCCGTGCGCTGAGAGAAGGCCAGCAAATCCACGCCTATGCAATCAAATCCGGACTCGTTTTGTCCAATGTGTACGTCAAGAACACAATCATGAGGCTCTACGCAGTTTGTGGGATTGTAAATTACGTCCGGAAGGTGTTCGACGAAACTCCCCAGAGGGACTTGGTATCTTGGACTACTCTTATTCAGGGATATGTTAAAATGGGCCTGGCCAGGGAAGGCGTGGAGGCCTTCTTTGATATGTGTGATGCGAAAATGAGGCCGGATGAGATGACATTGGTCATTGTGCTCTCTGCTTGCTCTAAATTGGGAGACTTGAGCTTGGGTAGGAAGATAAGTAGGTACATTGATGACAACGGGGTTTACCCAGACGTTTTTGTAGGCAATGCATTGGTTAATATGTACTTGGAGTGTGGCGATGCTGAACTTGCACGTGGAGTGTTTGATGGGATGCCTGTGAGAAATGTGGTTTCTTGGAATTCCATGATATCTGGCTTGGCGCATCAAGGGAAGTATAAGGAGGCGTTGGATGTGTTCCAGGAGATGCAAAGAATCGGTCTTGAACCGGATGATGTTACTTTAGTTGGTGTTTTGAATTCATGCGCGAATCTTGGAGTGCTCGAGTTGGGGAAGTGGGTGCATGCTTATGTTGATAGGAATCAGATTGAGGCTGATGGGTATATAGGGAATGCGCTTGTGGATATGTATGCTAAGTGTGGAAGCATAGACCGGGCATTCAGGGTGTTTCAAGGCATGAAACGGAGAGATGTGTATTCGTATACTGCGATGATTGTTGGATTAGCCATGCATGGGGAAGTGGAGGTGGCATTGGATATATTTTCTGAGATGCCTAGAATGGGCATTCAACCTGATGAGGTTACATTTGTAGGTGTCCTTGCAGCTTGTAGTCATGGAGGACTAGTGGCAGAGGGTCAGAAGTATTTCAGGGATATGTCAACTGTGTACAATCTTAGACCTCAGACAGAGCATTACGGATGCATGGTTGACCTTTTAGGTCGTGCTGGGTTAATAAATGAGGCAGAGGAGTTTGTTAATAACATGCCAATTGAGCCTGATGCCTTTGTCTGGGGGGCACTATTGGGAGCTTGCAGGATACATGGGAAAGTAGAGCTTGCTGAAACTGTGATGAAGAAGCTATTGAAGATAGAGCCAGAGAGAGATGGTGCATACGTACTCATGTCCAATATATATTCTTCTGCAAATAAATGGAGGAATGCAGTGCAGTTGAGAAGGGAAATGAAAGAAAAGAACATGACGAAAACTCCTGGCTGTAGTTCAATTGAACTTGAAGGTGTTGTTCATGAATTCAGAAAGGGTGACAAATCACATAAAAGAAGTAAACACATATACAAATTGCTAGACGAGATCATGAGCCACGTAAAGGATTATGGGGTTTTGGCTCACAGAAGTACATTCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

609

Amino Acids

68.49

Weight (kDa)

8.09

Isoelectric Point (pI)

41.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 183 - 231 1.2e-07 PPR repeat family
PPR_2 PF13041 283 - 332 1e-13 PPR repeat family
PPR_1 PF12854 283 - 312 8.6e-06 PPR repeat
PPR PF01535 286 - 316 7e-10 PPR repeat
PPR_2 PF13041 384 - 432 4.3e-11 PPR repeat family
PPR PF01535 387 - 417 3.3e-06 PPR repeat
E_motif PF20431 502 - 564 1.5e-19 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014793)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g07400
malus_domestica MD02G1240700.v1.1 MD07G1076300.v1.1
prunus_persica Prupe.2G097100_v2.0.a1
pyrus_communis pycom02g20580 pycom07g06010
rosa_chinensis RchiOBHm_Chr1g0337001
rosa_laevigata RLG00000029313
rosa_multiflora Rmu_sc0009742.1_g000003
rosa_roxburghii Rroxscaffold_4G00315060
rosa_rugosa Rorug01G0129900 Rorug01G0130000 Rorug01G0130200
rosa_samantha Rh1AG150700 Rh1BG119100 Rh1CG141900
rosa_wichuraiana Rw1G012320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1166
AccII CGCG 1 cut(s) 992
AccIII TCCGGA 2 cut(s) 437, 516
AcoI YGGCCR 1 cut(s) 597
AcsI RAATTY 3 cut(s) 865, 982, 1712
AcvI CACGTG 1 cut(s) 821
AfaI GTAC 6 cut(s) 461, 731, 791, 1352, 1581, 1819
AfiI CCNNNNNNNGG 5 cut(s) 601, 1197, 1244, 1473, 1789
AhlI ACTAGT 1 cut(s) 1306
AjiI CACGTC 1 cut(s) 288
AjnI CCWGG 4 cut(s) 594, 599, 924, 1672
AluBI AGCT 5 cut(s) 708, 1289, 1493, 1519, 1543
AluI AGCT 5 cut(s) 708, 1289, 1493, 1519, 1543
Alw21I GWGCWC 4 cut(s) 372, 385, 678, 1008
Alw26I GTCTC 1 cut(s) 693
Alw44I GTGCAC 1 cut(s) 381
Ama87I CYCGRG 1 cut(s) 1007
Aor13HI TCCGGA 2 cut(s) 437, 516
AoxI GGCC 8 cut(s) 107, 256, 334, 406, 592, 597, 615, 647
ApaLI GTGCAC 1 cut(s) 381
ApeKI GCWGC 1 cut(s) 1286
ApoI RAATTY 3 cut(s) 865, 982, 1712
ArsI GACNNNNNNTTYG 2 cut(s) 928, 960
Asp700I GAANNNNTTC 3 cut(s) 312, 524, 1328
AspLEI GCGC 4 cut(s) 397, 889, 992, 1081
AspS9I GGNCC 1 cut(s) 592
AsuC2I CCSGG 1 cut(s) 1118
AsuHPI GGTGA 1 cut(s) 1736
AvaI CYCGRG 1 cut(s) 1007
BaeGI GKGCMC 2 cut(s) 385, 1483
BalI TGGCCA 1 cut(s) 599
BbrPI CACGTG 1 cut(s) 821
Bbv12I GWGCWC 4 cut(s) 372, 385, 678, 1008
BbvI GCAGC 1 cut(s) 1298
BccI CCATC 4 cut(s) 254, 827, 1055, 1562
BceAI ACGGC 1 cut(s) 375
BciT130I CCWGG 4 cut(s) 596, 601, 926, 1674
BciVI GTATCC 1 cut(s) 1494
BcnI CCSGG 1 cut(s) 1118
BcoDI GTCTC 1 cut(s) 693
BcuI ACTAGT 1 cut(s) 1306
BfaI CTAG 3 cut(s) 1239, 1307, 1766
BfmI CTRYAG 1 cut(s) 1678
BfuI GTATCC 1 cut(s) 1494
BisI GCNGC 1 cut(s) 1287
BlsI GCNGC 1 cut(s) 1288
Bme1390I CCNGG 5 cut(s) 596, 601, 926, 1118, 1674
BmeT110I CYCGRG 1 cut(s) 1007
BmgBI CACGTC 1 cut(s) 288
BmgT120I GGNCC 1 cut(s) 592
BmrFI CCNGG 5 cut(s) 596, 601, 926, 1118, 1674
BmsI GCATC 8 cut(s) 625, 796, 828, 898, 921, 1224, 1373, 1453
BoxI GACNNNNGTC 1 cut(s) 665
BpuEI CTTGAG 1 cut(s) 724
BpuMI CCSGG 1 cut(s) 1118
BsaAI YACGTR 3 cut(s) 821, 1579, 1786
BsaBI GATNNNNATC 1 cut(s) 1044
BsaJI CCNNGG 2 cut(s) 253, 600
BsaWI WCCGGW 3 cut(s) 437, 516, 952
BsaXI ACNNNNNCTCC 6 cut(s) 182, 212, 1293, 1323, 1654, 1684
Bsc4I CCNNNNNNNGG 5 cut(s) 601, 1197, 1244, 1473, 1789
Bse3DI GCAATG 1 cut(s) 778
Bse8I GATNNNNATC 1 cut(s) 1044
BseAI TCCGGA 2 cut(s) 437, 516
BseBI CCWGG 4 cut(s) 596, 601, 926, 1674
BseDI CCNNGG 2 cut(s) 253, 600
BseGI GGATG 6 cut(s) 249, 658, 843, 922, 961, 1388
BseJI GATNNNNATC 1 cut(s) 1044
BseLI CCNNNNNNNGG 5 cut(s) 601, 1197, 1244, 1473, 1789
BseMI GCAATG 1 cut(s) 778
BseMII CTCAG 4 cut(s) 55, 389, 1221, 1379
BseRI GAGGAG 3 cut(s) 156, 317, 1445
BseSI GKGCMC 2 cut(s) 385, 1483
BseXI GCAGC 1 cut(s) 1298
BseYI CCCAGC 1 cut(s) 1409
BsgI GTGCAG 1 cut(s) 1649
Bsh1236I CGCG 1 cut(s) 992
BshFI GGCC 8 cut(s) 109, 258, 336, 408, 594, 599, 617, 649
BsiHKAI GWGCWC 4 cut(s) 372, 385, 678, 1008
BsiHKCI CYCGRG 1 cut(s) 1007
BsiSI CCGG 5 cut(s) 438, 517, 650, 953, 1117
BslFI GGGAC 3 cut(s) 274, 344, 560
BslI CCNNNNNNNGG 5 cut(s) 601, 1197, 1244, 1473, 1789
BsmAI GTCTC 1 cut(s) 693
BsmFI GGGAC 3 cut(s) 274, 344, 560
BsmI GAATGC 4 cut(s) 1081, 1121, 1248, 1627
BsnI GGCC 8 cut(s) 109, 258, 336, 408, 594, 599, 617, 649
BsoBI CYCGRG 1 cut(s) 1007
Bsp1286I GDGCHC 5 cut(s) 372, 385, 678, 1008, 1483
Bsp13I TCCGGA 2 cut(s) 437, 516
Bsp1407I TGTACA 1 cut(s) 1350
Bsp143I GATC 2 cut(s) 44, 1773
BspANI GGCC 8 cut(s) 109, 258, 336, 408, 594, 599, 617, 649
BspCNI CTCAG 4 cut(s) 54, 390, 1222, 1378
BspEI TCCGGA 2 cut(s) 437, 516
BspFNI CGCG 1 cut(s) 992
BspHI TCATGA 3 cut(s) 477, 1708, 1776
BsrDI GCAATG 1 cut(s) 778
BsrGI TGTACA 1 cut(s) 1350
BssECI CCNNGG 2 cut(s) 253, 600
BssMI GATC 2 cut(s) 44, 1773
BssNAI GTATAC 1 cut(s) 1167
BssT1I CCWWGG 1 cut(s) 253
Bst1107I GTATAC 1 cut(s) 1167
Bst2UI CCWGG 4 cut(s) 596, 601, 926, 1674
Bst4CI ACNGT 4 cut(s) 358, 387, 1348, 1531
Bst6I CTCTTC 2 cut(s) 117, 123
BstAUI TGTACA 1 cut(s) 1350
BstBAI YACGTR 3 cut(s) 821, 1579, 1786
BstC8I GCNNGC 7 cut(s) 27, 221, 410, 685, 1029, 1495, 1521
BstDEI CTNAG 6 cut(s) 41, 398, 1098, 1230, 1358, 1365
BstF5I GGATG 6 cut(s) 249, 658, 843, 922, 961, 1388
BstFNI CGCG 1 cut(s) 992
BstHHI GCGC 4 cut(s) 397, 889, 992, 1081
BstKTI GATC 2 cut(s) 47, 1776
BstMAI GTCTC 1 cut(s) 693
BstMBI GATC 2 cut(s) 44, 1773
BstMWI GCNNNNNNNGC 2 cut(s) 815, 1456
BstNI CCWGG 4 cut(s) 596, 601, 926, 1674
BstNSI RCATGY 4 cut(s) 29, 325, 1031, 1450
BstPAI GACNNNNGTC 1 cut(s) 665
BstSCI CCNGG 5 cut(s) 594, 599, 924, 1116, 1672
BstSFI CTRYAG 1 cut(s) 1678
BstSLI GKGCMC 2 cut(s) 385, 1483
BstSNI TACGTA 1 cut(s) 1579
BstUI CGCG 1 cut(s) 992
BstV1I GCAGC 1 cut(s) 1298
BstZ17I GTATAC 1 cut(s) 1167
BsuI GTATCC 1 cut(s) 1494
BsuRI GGCC 8 cut(s) 109, 258, 336, 408, 594, 599, 617, 649
BtgZI GCGATG 2 cut(s) 819, 1187
BtrI CACGTC 1 cut(s) 288
BtsCI GGATG 6 cut(s) 249, 658, 843, 922, 961, 1388
BtsI GCAGTG 1 cut(s) 1632
BtsIMutI CAGTG 3 cut(s) 354, 392, 1632
Cac8I GCNNGC 7 cut(s) 27, 221, 410, 685, 1029, 1495, 1521
CciI TCATGA 3 cut(s) 477, 1708, 1776
CfoI GCGC 4 cut(s) 397, 889, 992, 1081
Cfr13I GGNCC 1 cut(s) 592
Csp6I GTAC 6 cut(s) 460, 730, 790, 1351, 1580, 1818
CviQI GTAC 6 cut(s) 460, 730, 790, 1351, 1580, 1818
DdeI CTNAG 6 cut(s) 41, 398, 1098, 1230, 1358, 1365
DpnI GATC 2 cut(s) 46, 1775
DpnII GATC 2 cut(s) 44, 1773
EaeI YGGCCR 1 cut(s) 597
Eam1104I CTCTTC 2 cut(s) 117, 123
EarI CTCTTC 2 cut(s) 117, 123
Eco105I TACGTA 1 cut(s) 1579
Eco130I CCWWGG 1 cut(s) 253
Eco147I AGGCCT 3 cut(s) 109, 258, 617
Eco32I GATATC 1 cut(s) 876
Eco72I CACGTG 1 cut(s) 821
Eco88I CYCGRG 1 cut(s) 1007
EcoRI GAATTC 3 cut(s) 865, 982, 1712
EcoRII CCWGG 4 cut(s) 594, 599, 924, 1672
EcoRV GATATC 1 cut(s) 876
EcoT14I CCWWGG 1 cut(s) 253
EcoT22I ATGCAT 3 cut(s) 778, 1197, 1388
ErhI CCWWGG 1 cut(s) 253
FalI AAGNNNNNCTT 2 cut(s) 1503, 1535
FaqI GGGAC 3 cut(s) 274, 344, 560
FblI GTMKAC 1 cut(s) 1166
Fnu4HI GCNGC 1 cut(s) 1287
FokI GGATG 6 cut(s) 236, 665, 850, 929, 968, 1395
Fsp4HI GCNGC 1 cut(s) 1287
FspBI CTAG 3 cut(s) 1239, 1307, 1766
GlaI GCGC 4 cut(s) 396, 888, 991, 1080
GluI GCNGC 1 cut(s) 1287
GsaI CCCAGC 1 cut(s) 1413
HaeIII GGCC 8 cut(s) 109, 258, 336, 408, 594, 599, 617, 649
HapII CCGG 5 cut(s) 438, 517, 650, 953, 1117
HhaI GCGC 4 cut(s) 397, 889, 992, 1081
Hin6I GCGC 4 cut(s) 395, 887, 990, 1079
HinP1I GCGC 4 cut(s) 395, 887, 990, 1079
HincII GTYRAC 2 cut(s) 1344, 1393
HindII GTYRAC 2 cut(s) 1344, 1393
HinfI GANTC 5 cut(s) 39, 441, 939, 994, 1045
HpaII CCGG 5 cut(s) 438, 517, 650, 953, 1117
HphI GGTGA 1 cut(s) 1736
Hpy166II GTNNAC 8 cut(s) 383, 460, 751, 1167, 1344, 1351, 1393, 1748
Hpy188I TCNGA 6 cut(s) 44, 1050, 1231, 1323, 1368, 1718
Hpy188III TCNNGA 8 cut(s) 344, 438, 466, 478, 517, 947, 1709, 1777
Hpy8I GTNNAC 8 cut(s) 383, 460, 751, 1167, 1344, 1351, 1393, 1748
Hpy99I CGWCG 1 cut(s) 533
HpyCH4III ACNGT 4 cut(s) 358, 387, 1348, 1531
HpyCH4IV ACGT 7 cut(s) 287, 462, 513, 759, 820, 1578, 1785
HpyF10VI GCNNNNNNNGC 2 cut(s) 815, 1456
HpyF3I CTNAG 6 cut(s) 41, 398, 1098, 1230, 1358, 1365
HpySE526I ACGT 7 cut(s) 287, 462, 513, 759, 820, 1578, 1785
HspAI GCGC 4 cut(s) 395, 887, 990, 1079
Kpn2I TCCGGA 2 cut(s) 437, 516
Kzo9I GATC 2 cut(s) 44, 1773
LmnI GCTCC 2 cut(s) 330, 1490
Lsp1109I GCAGC 1 cut(s) 1298
LweI GCATC 8 cut(s) 625, 796, 828, 898, 921, 1224, 1373, 1453
MaeI CTAG 3 cut(s) 1239, 1307, 1766
MaeII ACGT 7 cut(s) 287, 462, 513, 759, 820, 1578, 1785
MaeIII GTNAC 3 cut(s) 961, 1264, 1724
MalI GATC 2 cut(s) 46, 1775
MboI GATC 2 cut(s) 44, 1773
MboII GAAGA 8 cut(s) 104, 110, 153, 287, 730, 1549, 1561, 1593
MfeI CAATTG 2 cut(s) 1452, 1686
MhlI GDGCHC 5 cut(s) 372, 385, 678, 1008, 1483
MlsI TGGCCA 1 cut(s) 599
MluCI AATT 8 cut(s) 508, 692, 865, 982, 1452, 1686, 1712, 1760
MluNI TGGCCA 1 cut(s) 599
MlyI GAGTC 2 cut(s) 33, 435
MmeI TCCRAC 2 cut(s) 894, 1162
Mox20I TGGCCA 1 cut(s) 599
Mph1103I ATGCAT 3 cut(s) 778, 1197, 1388
MroI TCCGGA 2 cut(s) 437, 516
MroXI GAANNNNTTC 3 cut(s) 312, 524, 1328
MscI TGGCCA 1 cut(s) 599
MseI TTAA 5 cut(s) 206, 585, 783, 1415, 1440
MslI CAYNNNNRTG 3 cut(s) 423, 476, 1032
Msp20I TGGCCA 1 cut(s) 599
MspI CCGG 5 cut(s) 438, 517, 650, 953, 1117
MspR9I CCNGG 5 cut(s) 596, 601, 926, 1118, 1674
MunI CAATTG 2 cut(s) 1452, 1686
Mva1269I GAATGC 4 cut(s) 1081, 1121, 1248, 1627
MvaI CCWGG 4 cut(s) 596, 601, 926, 1674
MvnI CGCG 1 cut(s) 992
MwoI GCNNNNNNNGC 2 cut(s) 815, 1456
NciI CCSGG 1 cut(s) 1118
NdeII GATC 2 cut(s) 44, 1773
NmuCI GTSAC 1 cut(s) 1724
NsiI ATGCAT 3 cut(s) 778, 1197, 1388
NspI RCATGY 4 cut(s) 29, 325, 1031, 1450
PaeI GCATGC 2 cut(s) 29, 1031
PaeR7I CTCGAG 1 cut(s) 1007
PagI TCATGA 3 cut(s) 477, 1708, 1776
PceI AGGCCT 3 cut(s) 109, 258, 617
PcsI WCGNNNNNNNCGW 1 cut(s) 1169
PctI GAATGC 4 cut(s) 1081, 1121, 1248, 1627
PdmI GAANNNNTTC 3 cut(s) 312, 524, 1328
PfeI GAWTC 3 cut(s) 939, 994, 1045
PfoI TCCNGGA 1 cut(s) 924
PkrI GCNGC 1 cut(s) 1288
PleI GAGTC 2 cut(s) 33, 435
PmaCI CACGTG 1 cut(s) 821
PmlI CACGTG 1 cut(s) 821
PpsI GAGTC 2 cut(s) 33, 435
Ppu21I YACGTR 3 cut(s) 821, 1579, 1786
PshAI GACNNNNGTC 1 cut(s) 665
Psp6I CCWGG 4 cut(s) 594, 599, 924, 1672
PspCI CACGTG 1 cut(s) 821
PspFI CCCAGC 1 cut(s) 1409
PspGI CCWGG 4 cut(s) 594, 599, 924, 1672
PspPI GGNCC 1 cut(s) 592
PspXI VCTCGAGB 1 cut(s) 1007
RsaI GTAC 6 cut(s) 461, 731, 791, 1352, 1581, 1819
RsaNI GTAC 6 cut(s) 460, 730, 790, 1351, 1580, 1818
RseI CAYNNNNRTG 3 cut(s) 423, 476, 1032
SaqAI TTAA 5 cut(s) 206, 585, 783, 1415, 1440
SatI GCNGC 1 cut(s) 1287
Sau3AI GATC 2 cut(s) 44, 1773
Sau96I GGNCC 1 cut(s) 592
SchI GAGTC 2 cut(s) 33, 435
ScrFI CCNGG 5 cut(s) 596, 601, 926, 1118, 1674
SduI GDGCHC 5 cut(s) 372, 385, 678, 1008, 1483
SfaNI GCATC 8 cut(s) 625, 796, 828, 898, 921, 1224, 1373, 1453
SfcI CTRYAG 1 cut(s) 1678
Sfr274I CTCGAG 1 cut(s) 1007
SlaI CTCGAG 1 cut(s) 1007
SmiMI CAYNNNNRTG 3 cut(s) 423, 476, 1032
SmlI CTYRAG 2 cut(s) 703, 1007
SmoI CTYRAG 2 cut(s) 703, 1007
SnaBI TACGTA 1 cut(s) 1579
SpeI ACTAGT 1 cut(s) 1306
SphI GCATGC 2 cut(s) 29, 1031
Sse9I AATT 8 cut(s) 508, 692, 865, 982, 1452, 1686, 1712, 1760
SseBI AGGCCT 3 cut(s) 109, 258, 617
SspMI CTAG 3 cut(s) 1239, 1307, 1766
StuI AGGCCT 3 cut(s) 109, 258, 617
StyD4I CCNGG 5 cut(s) 594, 599, 924, 1116, 1672
StyI CCWWGG 1 cut(s) 253
TaaI ACNGT 4 cut(s) 358, 387, 1348, 1531
TaiI ACGT 7 cut(s) 290, 465, 516, 762, 823, 1581, 1788
TaqI TCGA 2 cut(s) 528, 1008
TaqII GACCGA 1 cut(s) 932
TasI AATT 8 cut(s) 508, 692, 865, 982, 1452, 1686, 1712, 1760
TatI WGTACW 3 cut(s) 789, 1350, 1817
TfiI GAWTC 3 cut(s) 939, 994, 1045
Tru1I TTAA 5 cut(s) 206, 585, 783, 1415, 1440
Tru9I TTAA 5 cut(s) 206, 585, 783, 1415, 1440
TscAI CASTG 3 cut(s) 361, 392, 1632
TseFI GTSAC 1 cut(s) 1724
TseI GCWGC 1 cut(s) 1286
Tsp45I GTSAC 1 cut(s) 1724
TspDTI ATGAA 7 cut(s) 17, 975, 1157, 1550, 1661, 1697, 1725
TspGWI ACGGA 2 cut(s) 1162, 1395
TspRI CASTG 3 cut(s) 361, 392, 1632
VneI GTGCAC 1 cut(s) 381
XapI RAATTY 3 cut(s) 865, 982, 1712
XceI RCATGY 4 cut(s) 29, 325, 1031, 1450
XcmI CCANNNNNNNNNTGG 1 cut(s) 607
XhoI CTCGAG 1 cut(s) 1007
XmiI GTMKAC 1 cut(s) 1166
XmnI GAANNNNTTC 3 cut(s) 312, 524, 1328
XspI CTAG 3 cut(s) 1239, 1307, 1766
Zsp2I ATGCAT 3 cut(s) 778, 1197, 1388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.