Rroxscaffold_4G00315060

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0014793
Physical Location & Seq
Reverse (-)
39239148 .. 39241605
2458 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00315060.1

Sequence Viewer

Length: 1839 bp
ATGAACTCCCAAGAGTTATGGGTGCATGCTTATAGCAGACTCAGATCATGCAAATCAATAAGCATAACTCATCTCAAACAAACCCACACATTTCTCATCAAAACAAGGCCTCTTCCTCTTCCTCTCCCAACCCAACACCTCATCTACCCTAAACTCATTTCTTCTACTCATCACAACAACAACCTCACCTACATTTTCTCCTTCTTAAACCACTTGGACAAGCCAGACCTCTGCCTCAGCCTCTACAATGCCATCATCCAAGGCCTCATCCCTTCCAATCCCACAAACAAAACCACCTCGCTTCTTCAAGTGCTTGAACTACTTCGGCATATGCTCCTCAATGGCCTCCTTCCTGACCACTACACTGTGCCCTCTGTGCTCAAAGCCTGTGCACAGTGTCGTGCGCTGAGAGAAGGCCAGCAAATCCACGCCTATGCAATCAAATCCGGACTCGTTTTGTCCAATGTGTACGTCAATAACACAATCATGAGGCTCTACGCAGTTTGTGGGATTGTAAATTACGTCCGGAAGGTGTTCGACGAAAGTCCCCAGAGGGACGTGATATCTTGGACTACTCTTATTCAGGGATATGTTAAAATGGGGCTGGCCAGGGAAGGCGTGGAGGCCTTCTTTGATATGTGTGATGCGAAAATGAGGCCGGATGAGATGACATTGGTCATTGTGCTCTCTGCTTGCTCTAAATTGGGAGACTTGAGCTTGGGTAGGAAGATAAGTAGGTACATTGATGATAACGGGGTTTACCCAGATGTTTATATAGGCAATGCATTGGTTAATATGTACTTGGAGTGTGGCGATGCTGAACTTGCACGTGGAGTGTTTGATGGGATGGCTGTGAGAAATGTGGTTTCTTGGAATTCCATGATATCTGGCTTGGCGCATCAAGGGAAGTATAAGGAGGCATTGGATGTGTTCCAGGAGATGCAAAGAATCGGTCTTGAACCGGATGATGTTACTTTAGTTGGTGTTTTGAATTCGTGCGCGAATCTTGGAGTGCTTGAGTTGGGGAAGTGGGTGCATGCTTATGTTGATAGGAATCAGATTGAGGCTGATGGGTATATAGGGAATGCACTTGTGGATATGTATGCTAAGTGTGGAAGCATAGACCGGGCATTCAGGGTGTTTCAAGGCATGAAACGGAGAGATGTGTATTCATATACTGCGATGATTGTTGGATTAGCTATGCATGGGGAAGTGGAGGTGGCATTGGATATATTTTCTGAGATGCCTAGAACGGGCATTCAACCTGATGAGGTTACATTTGTAGGTGTCCTTGCAGCTTGTAGTCATGGAGGACTAGTGGCAGAGGGTCAGAAGTATTTCAGGGACATGTCAACTGTGTACAATCTTAGACCTCAGACAGAGCATTACGGATGCATGGTTGACCTTTTAGGTCGTGCTGGGTTAATAAATGAGGCAGAGGAGTTTGTTAATAACATGCCAATTGAGCCTGATGCCTTTGTCTGGGGGGCACTATTGGGAGCTTGCAGGATACATGGGAAAGTAGAGCTTGCTGAAACTGTGATGAAGAAGCTATTGAAGGTAGAGCCAGAGAGAGATGGTGCATACGTACTCATGTCCAATATATATTCTTCTGCAAATAAATGGAGGAATGCAGTGCAGTTGAGAAGCGCAATGAAAGAAAAGAACATGACGAAAACTCCTGGCTGTAGTTCAATTGAACTTGAAGGCGTTGTTCATGAATTCAGAAAGGGTGACAAATCACATAAAAGAAGTAAACACATATACAAATTGCTAGACGAGATCATGAGCCACGTAAAGGATTATGGGGTTTTGGCTCACAGAAGTACACTCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

612

Amino Acids

68.67

Weight (kDa)

7.58

Isoelectric Point (pI)

38.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 185 - 234 6.2e-08 PPR repeat family
PPR_2 PF13041 286 - 335 1e-13 PPR repeat family
PPR_1 PF12854 286 - 315 8.6e-06 PPR repeat
PPR PF01535 289 - 319 7e-10 PPR repeat
PPR_2 PF13041 387 - 435 7.1e-11 PPR repeat family
E_motif PF20431 505 - 567 1.4e-18 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014793)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g07400
malus_domestica MD02G1240700.v1.1 MD07G1076300.v1.1
prunus_persica Prupe.2G097100_v2.0.a1
pyrus_communis pycom02g20580 pycom07g06010
rosa_chinensis RchiOBHm_Chr1g0337001
rosa_laevigata RLG00000029313
rosa_multiflora Rmu_sc0009742.1_g000003
rosa_roxburghii Rroxscaffold_4G00315060
rosa_rugosa Rorug01G0129900 Rorug01G0130000 Rorug01G0130200
rosa_samantha Rh1AG150700 Rh1BG119100 Rh1CG141900
rosa_wichuraiana Rw1G012320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1001
AccIII TCCGGA 2 cut(s) 446, 525
AcoI YGGCCR 1 cut(s) 606
AcsI RAATTY 3 cut(s) 874, 991, 1721
AcvI CACGTG 1 cut(s) 830
AfaI GTAC 6 cut(s) 470, 740, 800, 1361, 1590, 1828
AfiI CCNNNNNNNGG 3 cut(s) 1253, 1482, 1798
AflIII ACRYGT 1 cut(s) 1347
AhlI ACTAGT 1 cut(s) 1315
AjiI CACGTC 1 cut(s) 559
AjnI CCWGG 3 cut(s) 608, 933, 1681
AluBI AGCT 6 cut(s) 717, 1199, 1298, 1502, 1528, 1552
AluI AGCT 6 cut(s) 717, 1199, 1298, 1502, 1528, 1552
Alw21I GWGCWC 3 cut(s) 381, 394, 687
Alw26I GTCTC 1 cut(s) 702
Alw44I GTGCAC 1 cut(s) 390
Aor13HI TCCGGA 2 cut(s) 446, 525
AoxI GGCC 7 cut(s) 107, 262, 343, 415, 606, 624, 656
ApaLI GTGCAC 1 cut(s) 390
ApeKI GCWGC 1 cut(s) 1295
ApoI RAATTY 3 cut(s) 874, 991, 1721
ArsI GACNNNNNNTTYG 2 cut(s) 937, 969
Asp700I GAANNNNTTC 3 cut(s) 321, 533, 1337
AspLEI GCGC 4 cut(s) 406, 898, 1001, 1652
AsuC2I CCSGG 1 cut(s) 1127
AsuHPI GGTGA 2 cut(s) 178, 1745
BaeGI GKGCMC 3 cut(s) 372, 394, 1492
BalI TGGCCA 1 cut(s) 608
BbrPI CACGTG 1 cut(s) 830
Bbv12I GWGCWC 3 cut(s) 381, 394, 687
BbvCI CCTCAGC 1 cut(s) 236
BbvI GCAGC 1 cut(s) 1307
BccI CCATC 5 cut(s) 260, 836, 841, 1064, 1571
BciT130I CCWGG 3 cut(s) 610, 935, 1683
BciVI GTATCC 1 cut(s) 1503
BcnI CCSGG 1 cut(s) 1127
BcoDI GTCTC 1 cut(s) 702
BcuI ACTAGT 1 cut(s) 1315
BfaI CTAG 3 cut(s) 1248, 1316, 1775
BfmI CTRYAG 1 cut(s) 1687
BfuI GTATCC 1 cut(s) 1503
BisI GCNGC 1 cut(s) 1296
BlsI GCNGC 1 cut(s) 1297
Bme1390I CCNGG 4 cut(s) 610, 935, 1127, 1683
BmgBI CACGTC 1 cut(s) 559
BmrFI CCNGG 4 cut(s) 610, 935, 1127, 1683
BmsI GCATC 7 cut(s) 634, 805, 907, 930, 1233, 1382, 1462
BoxI GACNNNNGTC 2 cut(s) 543, 674
Bpu10I CCTNAGC 1 cut(s) 236
BpuEI CTTGAG 2 cut(s) 733, 1037
BpuMI CCSGG 1 cut(s) 1127
BsaAI YACGTR 3 cut(s) 830, 1588, 1795
BsaBI GATNNNNATC 1 cut(s) 1053
BsaJI CCNNGG 2 cut(s) 259, 609
BsaWI WCCGGW 3 cut(s) 446, 525, 961
BsaXI ACNNNNNCTCC 6 cut(s) 182, 212, 1302, 1332, 1663, 1693
Bsc4I CCNNNNNNNGG 3 cut(s) 1253, 1482, 1798
Bse3DI GCAATG 2 cut(s) 787, 1659
Bse8I GATNNNNATC 1 cut(s) 1053
BseAI TCCGGA 2 cut(s) 446, 525
BseBI CCWGG 3 cut(s) 610, 935, 1683
BseDI CCNNGG 2 cut(s) 259, 609
BseGI GGATG 7 cut(s) 255, 267, 667, 852, 931, 970, 1397
BseJI GATNNNNATC 1 cut(s) 1053
BseLI CCNNNNNNNGG 3 cut(s) 1253, 1482, 1798
BseMI GCAATG 2 cut(s) 787, 1659
BseMII CTCAG 5 cut(s) 55, 250, 398, 1230, 1388
BseRI GAGGAG 2 cut(s) 326, 1454
BseSI GKGCMC 3 cut(s) 372, 394, 1492
BseXI GCAGC 1 cut(s) 1307
BseYI CCCAGC 1 cut(s) 1418
BsgI GTGCAG 1 cut(s) 1658
Bsh1236I CGCG 1 cut(s) 1001
BshFI GGCC 7 cut(s) 109, 264, 345, 417, 608, 626, 658
BsiHKAI GWGCWC 3 cut(s) 381, 394, 687
BsiSI CCGG 5 cut(s) 447, 526, 659, 962, 1126
BslFI GGGAC 3 cut(s) 531, 569, 1358
BslI CCNNNNNNNGG 3 cut(s) 1253, 1482, 1798
BsmAI GTCTC 1 cut(s) 702
BsmFI GGGAC 3 cut(s) 531, 569, 1358
BsmI GAATGC 4 cut(s) 1090, 1130, 1257, 1636
BsnI GGCC 7 cut(s) 109, 264, 345, 417, 608, 626, 658
Bsp1286I GDGCHC 5 cut(s) 372, 381, 394, 687, 1492
Bsp13I TCCGGA 2 cut(s) 446, 525
Bsp1407I TGTACA 1 cut(s) 1359
Bsp143I GATC 2 cut(s) 44, 1782
BspANI GGCC 7 cut(s) 109, 264, 345, 417, 608, 626, 658
BspCNI CTCAG 5 cut(s) 54, 249, 399, 1231, 1387
BspEI TCCGGA 2 cut(s) 446, 525
BspFNI CGCG 1 cut(s) 1001
BspHI TCATGA 3 cut(s) 486, 1717, 1785
BsrDI GCAATG 2 cut(s) 787, 1659
BsrGI TGTACA 1 cut(s) 1359
BssECI CCNNGG 2 cut(s) 259, 609
BssMI GATC 2 cut(s) 44, 1782
BssT1I CCWWGG 1 cut(s) 259
Bst2UI CCWGG 3 cut(s) 610, 935, 1683
Bst4CI ACNGT 4 cut(s) 367, 396, 1357, 1540
Bst6I CTCTTC 2 cut(s) 117, 123
BstAUI TGTACA 1 cut(s) 1359
BstBAI YACGTR 3 cut(s) 830, 1588, 1795
BstC8I GCNNGC 7 cut(s) 27, 419, 606, 694, 1038, 1504, 1530
BstDEI CTNAG 7 cut(s) 41, 236, 407, 1107, 1239, 1367, 1374
BstF5I GGATG 7 cut(s) 255, 267, 667, 852, 931, 970, 1397
BstFNI CGCG 1 cut(s) 1001
BstHHI GCGC 4 cut(s) 406, 898, 1001, 1652
BstKTI GATC 2 cut(s) 47, 1785
BstMAI GTCTC 1 cut(s) 702
BstMBI GATC 2 cut(s) 44, 1782
BstMWI GCNNNNNNNGC 3 cut(s) 376, 824, 1465
BstNI CCWGG 3 cut(s) 610, 935, 1683
BstNSI RCATGY 4 cut(s) 29, 1040, 1351, 1459
BstPAI GACNNNNGTC 2 cut(s) 543, 674
BstSCI CCNGG 4 cut(s) 608, 933, 1125, 1681
BstSFI CTRYAG 1 cut(s) 1687
BstSLI GKGCMC 3 cut(s) 372, 394, 1492
BstSNI TACGTA 1 cut(s) 1588
BstUI CGCG 1 cut(s) 1001
BstV1I GCAGC 1 cut(s) 1307
BsuI GTATCC 1 cut(s) 1503
BsuRI GGCC 7 cut(s) 109, 264, 345, 417, 608, 626, 658
BtgZI GCGATG 2 cut(s) 828, 1196
BtrI CACGTC 1 cut(s) 559
BtsCI GGATG 7 cut(s) 255, 267, 667, 852, 931, 970, 1397
BtsI GCAGTG 1 cut(s) 1641
BtsIMutI CAGTG 3 cut(s) 363, 401, 1641
Cac8I GCNNGC 7 cut(s) 27, 419, 606, 694, 1038, 1504, 1530
CciI TCATGA 3 cut(s) 486, 1717, 1785
CfoI GCGC 4 cut(s) 406, 898, 1001, 1652
Csp6I GTAC 6 cut(s) 469, 739, 799, 1360, 1589, 1827
CviQI GTAC 6 cut(s) 469, 739, 799, 1360, 1589, 1827
DdeI CTNAG 7 cut(s) 41, 236, 407, 1107, 1239, 1367, 1374
DpnI GATC 2 cut(s) 46, 1784
DpnII GATC 2 cut(s) 44, 1782
EaeI YGGCCR 1 cut(s) 606
Eam1104I CTCTTC 2 cut(s) 117, 123
EarI CTCTTC 2 cut(s) 117, 123
Eco105I TACGTA 1 cut(s) 1588
Eco130I CCWWGG 1 cut(s) 259
Eco147I AGGCCT 3 cut(s) 109, 264, 626
Eco32I GATATC 2 cut(s) 564, 885
Eco72I CACGTG 1 cut(s) 830
EcoRI GAATTC 3 cut(s) 874, 991, 1721
EcoRII CCWGG 3 cut(s) 608, 933, 1681
EcoRV GATATC 2 cut(s) 564, 885
EcoT14I CCWWGG 1 cut(s) 259
EcoT22I ATGCAT 3 cut(s) 787, 1206, 1397
ErhI CCWWGG 1 cut(s) 259
FalI AAGNNNNNCTT 2 cut(s) 1512, 1544
FaqI GGGAC 3 cut(s) 531, 569, 1358
FauNDI CATATG 1 cut(s) 330
Fnu4HI GCNGC 1 cut(s) 1296
FokI GGATG 7 cut(s) 242, 254, 674, 859, 938, 977, 1404
Fsp4HI GCNGC 1 cut(s) 1296
FspBI CTAG 3 cut(s) 1248, 1316, 1775
GlaI GCGC 4 cut(s) 405, 897, 1000, 1651
GluI GCNGC 1 cut(s) 1296
GsaI CCCAGC 1 cut(s) 1422
HaeIII GGCC 7 cut(s) 109, 264, 345, 417, 608, 626, 658
HapII CCGG 5 cut(s) 447, 526, 659, 962, 1126
HhaI GCGC 4 cut(s) 406, 898, 1001, 1652
Hin6I GCGC 4 cut(s) 404, 896, 999, 1650
HinP1I GCGC 4 cut(s) 404, 896, 999, 1650
HincII GTYRAC 2 cut(s) 1353, 1402
HindII GTYRAC 2 cut(s) 1353, 1402
HinfI GANTC 5 cut(s) 39, 450, 948, 1003, 1054
HpaII CCGG 5 cut(s) 447, 526, 659, 962, 1126
HphI GGTGA 2 cut(s) 178, 1745
Hpy166II GTNNAC 8 cut(s) 392, 469, 760, 1353, 1360, 1402, 1757, 1829
Hpy188I TCNGA 6 cut(s) 44, 1059, 1240, 1332, 1377, 1727
Hpy188III TCNNGA 7 cut(s) 353, 447, 487, 526, 956, 1718, 1786
Hpy8I GTNNAC 8 cut(s) 392, 469, 760, 1353, 1360, 1402, 1757, 1829
Hpy99I CGWCG 1 cut(s) 542
HpyAV CCTTC 9 cut(s) 211, 282, 359, 407, 523, 608, 637, 1552, 1700
HpyCH4III ACNGT 4 cut(s) 367, 396, 1357, 1540
HpyCH4IV ACGT 6 cut(s) 471, 522, 558, 829, 1587, 1794
HpyF10VI GCNNNNNNNGC 3 cut(s) 376, 824, 1465
HpyF3I CTNAG 7 cut(s) 41, 236, 407, 1107, 1239, 1367, 1374
HpySE526I ACGT 6 cut(s) 471, 522, 558, 829, 1587, 1794
HspAI GCGC 4 cut(s) 404, 896, 999, 1650
Kpn2I TCCGGA 2 cut(s) 446, 525
Kzo9I GATC 2 cut(s) 44, 1782
LmnI GCTCC 2 cut(s) 339, 1499
Lsp1109I GCAGC 1 cut(s) 1307
LweI GCATC 7 cut(s) 634, 805, 907, 930, 1233, 1382, 1462
MaeI CTAG 3 cut(s) 1248, 1316, 1775
MaeII ACGT 6 cut(s) 471, 522, 558, 829, 1587, 1794
MaeIII GTNAC 3 cut(s) 970, 1273, 1733
MalI GATC 2 cut(s) 46, 1784
MboI GATC 2 cut(s) 44, 1782
MboII GAAGA 7 cut(s) 104, 110, 153, 296, 739, 1558, 1602
MfeI CAATTG 2 cut(s) 1461, 1695
MhlI GDGCHC 5 cut(s) 372, 381, 394, 687, 1492
MlsI TGGCCA 1 cut(s) 608
MluCI AATT 8 cut(s) 517, 701, 874, 991, 1461, 1695, 1721, 1769
MluNI TGGCCA 1 cut(s) 608
MlyI GAGTC 2 cut(s) 33, 444
MmeI TCCRAC 1 cut(s) 1171
Mox20I TGGCCA 1 cut(s) 608
Mph1103I ATGCAT 3 cut(s) 787, 1206, 1397
MroI TCCGGA 2 cut(s) 446, 525
MroXI GAANNNNTTC 3 cut(s) 321, 533, 1337
MscI TGGCCA 1 cut(s) 608
MseI TTAA 5 cut(s) 206, 594, 792, 1424, 1449
MslI CAYNNNNRTG 3 cut(s) 432, 485, 1041
Msp20I TGGCCA 1 cut(s) 608
MspI CCGG 5 cut(s) 447, 526, 659, 962, 1126
MspR9I CCNGG 4 cut(s) 610, 935, 1127, 1683
MunI CAATTG 2 cut(s) 1461, 1695
Mva1269I GAATGC 4 cut(s) 1090, 1130, 1257, 1636
MvaI CCWGG 3 cut(s) 610, 935, 1683
MvnI CGCG 1 cut(s) 1001
MwoI GCNNNNNNNGC 3 cut(s) 376, 824, 1465
NciI CCSGG 1 cut(s) 1127
NdeI CATATG 1 cut(s) 330
NdeII GATC 2 cut(s) 44, 1782
NmuCI GTSAC 1 cut(s) 1733
NsiI ATGCAT 3 cut(s) 787, 1206, 1397
NspI RCATGY 4 cut(s) 29, 1040, 1351, 1459
PaeI GCATGC 2 cut(s) 29, 1040
PagI TCATGA 3 cut(s) 486, 1717, 1785
PceI AGGCCT 3 cut(s) 109, 264, 626
PciI ACATGT 1 cut(s) 1347
PctI GAATGC 4 cut(s) 1090, 1130, 1257, 1636
PdmI GAANNNNTTC 3 cut(s) 321, 533, 1337
PfeI GAWTC 3 cut(s) 948, 1003, 1054
PfoI TCCNGGA 1 cut(s) 933
PkrI GCNGC 1 cut(s) 1297
PleI GAGTC 2 cut(s) 33, 444
PmaCI CACGTG 1 cut(s) 830
PmlI CACGTG 1 cut(s) 830
PpsI GAGTC 2 cut(s) 33, 444
Ppu21I YACGTR 3 cut(s) 830, 1588, 1795
PscI ACATGT 1 cut(s) 1347
PshAI GACNNNNGTC 2 cut(s) 543, 674
Psp6I CCWGG 3 cut(s) 608, 933, 1681
PspCI CACGTG 1 cut(s) 830
PspFI CCCAGC 1 cut(s) 1418
PspGI CCWGG 3 cut(s) 608, 933, 1681
RsaI GTAC 6 cut(s) 470, 740, 800, 1361, 1590, 1828
RsaNI GTAC 6 cut(s) 469, 739, 799, 1360, 1589, 1827
RseI CAYNNNNRTG 3 cut(s) 432, 485, 1041
SaqAI TTAA 5 cut(s) 206, 594, 792, 1424, 1449
SatI GCNGC 1 cut(s) 1296
Sau3AI GATC 2 cut(s) 44, 1782
SchI GAGTC 2 cut(s) 33, 444
ScrFI CCNGG 4 cut(s) 610, 935, 1127, 1683
SduI GDGCHC 5 cut(s) 372, 381, 394, 687, 1492
SfaNI GCATC 7 cut(s) 634, 805, 907, 930, 1233, 1382, 1462
SfcI CTRYAG 1 cut(s) 1687
SmiMI CAYNNNNRTG 3 cut(s) 432, 485, 1041
SmlI CTYRAG 2 cut(s) 712, 1016
SmoI CTYRAG 2 cut(s) 712, 1016
SnaBI TACGTA 1 cut(s) 1588
SpeI ACTAGT 1 cut(s) 1315
SphI GCATGC 2 cut(s) 29, 1040
Sse9I AATT 8 cut(s) 517, 701, 874, 991, 1461, 1695, 1721, 1769
SseBI AGGCCT 3 cut(s) 109, 264, 626
SspMI CTAG 3 cut(s) 1248, 1316, 1775
StuI AGGCCT 3 cut(s) 109, 264, 626
StyD4I CCNGG 4 cut(s) 608, 933, 1125, 1681
StyI CCWWGG 1 cut(s) 259
TaaI ACNGT 4 cut(s) 367, 396, 1357, 1540
TaiI ACGT 6 cut(s) 474, 525, 561, 832, 1590, 1797
TaqI TCGA 1 cut(s) 537
TaqII GACCGA 1 cut(s) 941
TasI AATT 8 cut(s) 517, 701, 874, 991, 1461, 1695, 1721, 1769
TatI WGTACW 3 cut(s) 798, 1359, 1826
TfiI GAWTC 3 cut(s) 948, 1003, 1054
Tru1I TTAA 5 cut(s) 206, 594, 792, 1424, 1449
Tru9I TTAA 5 cut(s) 206, 594, 792, 1424, 1449
TscAI CASTG 3 cut(s) 370, 401, 1641
TseFI GTSAC 1 cut(s) 1733
TseI GCWGC 1 cut(s) 1295
Tsp45I GTSAC 1 cut(s) 1733
TspDTI ATGAA 7 cut(s) 17, 1161, 1166, 1559, 1670, 1706, 1734
TspGWI ACGGA 2 cut(s) 1171, 1404
TspRI CASTG 3 cut(s) 370, 401, 1641
VneI GTGCAC 1 cut(s) 390
XapI RAATTY 3 cut(s) 874, 991, 1721
XceI RCATGY 4 cut(s) 29, 1040, 1351, 1459
XcmI CCANNNNNNNNNTGG 1 cut(s) 616
XmnI GAANNNNTTC 3 cut(s) 321, 533, 1337
XspI CTAG 3 cut(s) 1248, 1316, 1775
Zsp2I ATGCAT 3 cut(s) 787, 1206, 1397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.