pycom07g14870

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
16911818 .. 16914500
2683 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g14870.4

Sequence Viewer

Length: 2133 bp
ATGGAGCAGTCTAGGAGGGATACTGAGTACTGGGGCATTGGTTCGGGTCATATTTTCACTGTTGTGCAAGATTCTGATGGTAGTGCGGAGGTGAACTTGAAAATTTTGCAGGCGGAGAGTTTAGCTAGAGAGATGGAAAGAGGGAACAATGGGATTCCGAGGAATAGTTCCATAGCCAAGTTCGTTAATGAGGGTGAGGGTCTTGTGAAGGAGATTCAGGGTTTTACTCTTGGATCGAAGTTGATTCCAAAGCTATCTCGAGTTGGGAGATTGGTGTTGTATGGTTTCATTGCGTTGTGGGCATTGAAGAAGTTATTCACTTTTGGAAATAAAGAAGAGCGGTACTCGGAATTGGAGAAGGAAATGATGAGGACCGGGAACGATCAAAGCAAGAAAGGAGAAAGAGATGTTAGAACCGAGCAGTGTGGAAGATGTTCAAGCAGCTTTGAACTTATGAAAGTTATTGGGAGAGGAAAATCGTCAAATGGTAACCCGGCTCTACAAGTTTCTCCAAGCTCCATGACCACTGCTGAGTATACAGATTTTGATGATACAGTTCAGGAAATAAGTATAAGAAATATGGCCAGGCAAGAGCGAGAAATTCAGAGCAGGGATGGGGACAGAAACAATTTTCAGACTCTGAATGATGAAATTTCAGATGAAACTGTAAATGAAATTTCGGATGAAACAGACGCTGTCAAACGGCATGGAGACGATGAGGATAGTGATGATACTTCTAGTAAAAAGTCAGACTTTGTTGAGGATGGGAATAATCAAACTTTTAGTATTTCGAATATAGAAGTTTCAGATGATCGGGAAAGCACTAACCAGGATGTAACAGACTCTGAACAGAATTTACACTTACCAGACAATGCTCCTTTTAGGGAGTCCAGAAAGTCCAGCAAGGGTTCCCTGCAAGTAAAACCAAGGGTCATAAGGTCAGTGAAAGAAGCTAGGGAGTATCTTTCTAAACAAGATGACAAAACAAAGCTAAATGGAGAGCCCCGTTTTGAACCTGTCCCTAGAAGTGATGTTCTTGGAAGGCTACAAAGTGCTAAAGACTTTGGTAACAATGGTAGCCAGGGAGCGTTCGTGGTCAACAATGATTTAGGTTCTGTGGTTCCAAATGAAACATCAGATCCTCCATCTACCGAAAATGCTTTTGAAGATTATGATCTGAAGGATGACAAGTTTGAAGGTATAAAGAGTGATAAACCTGATGAAACCAAGAAAAGACACTTCATGGAAGATGATCAAAAGCAACAGGTTTCTTTAGATCATGAAAGTAGTAACAGTGATTCAATGATAGAACCATCTGTTAAATATGAGAAGTGGATCGAAGAAAACTTTAATGAATTTGAACCTATAGCTAAGAAGATTGGAGTTGGTTTTAGAGATAATTACATGGTTTCAAGAGGAAAAGCAGATCAAGAGTCAATTATGAGTTCGGACATGACACAGCTTGGATCTAACGAAGAAGATGACAGTGAACTTGAATGGATGAAAGATGATAGTCTTAGGGAAATTGTCCTTCAAGTCCGAGACAATGAGTTGGCAGGATGGGATCCGTTTCATATGATGGATGCTGAAGATAAGGATGCATTTTTTAAGGGTCTTGAGAAGAAAGTTGAGAAAGAGAATACAAAGCTGACGAAACTGCATGAGTTACTCCATTCGAACATTGAAAACCTCACTTATGGTGCAGACGGTATCAGCATCTATGATCCACCAGAGAAAATTATACCCCGAGGGAAAGGTCCCCCATTAGAAAAGAGTCCCGAATTCTTGAATTATTTCCAAGAGCAGCGGAAGGCAATTTTTGCTGAGAATGATGGGATTTCGGTGAATAAAGACGAGCAGAACTTTCTTCAAAACTCAACAGGATCCCAATCCCATGAGAATATTGCTGCCACTCCCATAAACAACGACCCAAATAAGAAGGATATTAGAAGTTCAAAGACAATTATAGAAGGGAGTGGTGGTTCTGTTAGAGCTGGAAAAAAATCAGGAAAGGAGTATTGGCAACACACAAAAAAATGGTCTCAGGGGTTTTTGGAATCCTACAACGCGGAGACAGACCCAGAAATTAAATCCACCATGAGGGACATGGGGAAGGGATCGATGGATCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

711

Amino Acids

80.25

Weight (kDa)

4.86

Isoelectric Point (pI)

42.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 340
AccI GTMKAC 1 cut(s) 536
AccII CGCG 1 cut(s) 2069
AciI CCGC 5 cut(s) 86, 113, 340, 1807, 2069
AcoI YGGCCR 1 cut(s) 582
AcsI RAATTY 7 cut(s) 102, 600, 651, 675, 853, 1355, 1781
AcuI CTGAAG 2 cut(s) 1199, 1608
AfaI GTAC 2 cut(s) 29, 344
AfiI CCNNNNNNNGG 1 cut(s) 2100
AjnI CCWGG 3 cut(s) 584, 828, 1080
AjuI GAANNNNNNNTTGG 2 cut(s) 2002, 2034
AleI CACNNNNGTG 1 cut(s) 62
AloI GAACNNNNNNTCC 2 cut(s) 1966, 1998
Alw26I GTCTC 4 cut(s) 705, 1536, 2046, 2066
AlwNI CAGNNNCTG 3 cut(s) 640, 695, 845
Ama87I CYCGRG 2 cut(s) 258, 1746
AoxI GGCC 1 cut(s) 582
ApeKI GCWGC 3 cut(s) 441, 1804, 1907
ApoI RAATTY 7 cut(s) 102, 600, 651, 675, 853, 1355, 1781
ArsI GACNNNNNNTTYG 2 cut(s) 2024, 2056
Asp700I GAANNNNTTC 3 cut(s) 314, 433, 1793
AspS9I GGNCC 2 cut(s) 372, 1757
AsuC2I CCSGG 2 cut(s) 376, 494
AsuHPI GGTGA 3 cut(s) 103, 206, 1855
AsuII TTCGAA 2 cut(s) 791, 1676
AvaI CYCGRG 2 cut(s) 258, 1746
AvaII GGWCC 2 cut(s) 372, 1757
BalI TGGCCA 1 cut(s) 584
BamHI GGATCC 2 cut(s) 1564, 1883
BanII GRGCYC 1 cut(s) 1005
BbvI GCAGC 3 cut(s) 453, 1816, 1894
BceAI ACGGC 1 cut(s) 719
BciT130I CCWGG 3 cut(s) 586, 830, 1082
BciVI GTATCC 1 cut(s) 13
BclI TGATCA 1 cut(s) 1252
BcnI CCSGG 2 cut(s) 376, 494
BcoDI GTCTC 4 cut(s) 705, 1536, 2046, 2066
BfaI CTAG 5 cut(s) 12, 126, 738, 954, 1023
BfmI CTRYAG 1 cut(s) 1365
BfuI GTATCC 1 cut(s) 13
BisI GCNGC 3 cut(s) 442, 1805, 1908
BlsI GCNGC 3 cut(s) 443, 1806, 1909
BmcAI AGTACT 1 cut(s) 29
Bme1390I CCNGG 5 cut(s) 376, 494, 586, 830, 1082
Bme18I GGWCC 2 cut(s) 372, 1757
BmeT110I CYCGRG 2 cut(s) 258, 1746
BmgT120I GGNCC 2 cut(s) 372, 1757
BmiI GGNNCC 5 cut(s) 910, 1122, 1566, 1759, 1885
BmrFI CCNGG 5 cut(s) 376, 494, 586, 830, 1082
BmrI ACTGGG 1 cut(s) 40
BmsI GCATC 3 cut(s) 1573, 1588, 1725
BmuI ACTGGG 1 cut(s) 40
BplI GAGNNNNNCTC 2 cut(s) 329, 361
Bpu14I TTCGAA 2 cut(s) 791, 1676
BpuEI CTTGAG 1 cut(s) 1637
BpuMI CCSGG 2 cut(s) 376, 494
Bsa29I ATCGAT 1 cut(s) 2120
BsaBI GATNNNNATC 2 cut(s) 1173, 1888
BsaI GGTCTC 1 cut(s) 2046
BsaJI CCNNGG 4 cut(s) 158, 926, 1081, 1747
BsaXI ACNNNNNCTCC 4 cut(s) 1077, 1107, 1966, 1996
Bsc4I CCNNNNNNNGG 1 cut(s) 2100
Bse1I ACTGG 1 cut(s) 35
Bse3DI GCAATG 1 cut(s) 288
Bse8I GATNNNNATC 2 cut(s) 1173, 1888
BseBI CCWGG 3 cut(s) 586, 830, 1082
BseCI ATCGAT 1 cut(s) 2120
BseDI CCNNGG 4 cut(s) 158, 926, 1081, 1747
BseGI GGATG 9 cut(s) 619, 688, 769, 838, 1189, 1506, 1565, 1588, 1603
BseJI GATNNNNATC 2 cut(s) 1173, 1888
BseLI CCNNNNNNNGG 1 cut(s) 2100
BseMI GCAATG 1 cut(s) 288
BseMII CTCAG 4 cut(s) 15, 522, 1815, 2057
BseNI ACTGG 1 cut(s) 35
BseXI GCAGC 3 cut(s) 453, 1816, 1894
BsgI GTGCAG 1 cut(s) 1722
Bsh1236I CGCG 1 cut(s) 2069
BshFI GGCC 1 cut(s) 584
BshVI ATCGAT 1 cut(s) 2120
BsiHKCI CYCGRG 2 cut(s) 258, 1746
BsiSI CCGG 2 cut(s) 375, 494
BslFI GGGAC 5 cut(s) 632, 1004, 1743, 1761, 2117
BslI CCNNNNNNNGG 1 cut(s) 2100
BsmAI GTCTC 4 cut(s) 705, 1536, 2046, 2066
BsmBI CGTCTC 1 cut(s) 705
BsmFI GGGAC 5 cut(s) 632, 1004, 1743, 1761, 2117
BsnI GGCC 1 cut(s) 584
Bso31I GGTCTC 1 cut(s) 2046
BsoBI CYCGRG 2 cut(s) 258, 1746
Bsp119I TTCGAA 2 cut(s) 791, 1676
Bsp1286I GDGCHC 1 cut(s) 1005
BspACI CCGC 5 cut(s) 86, 113, 340, 1807, 2069
BspANI GGCC 1 cut(s) 584
BspCNI CTCAG 4 cut(s) 16, 523, 1816, 2056
BspDI ATCGAT 1 cut(s) 2120
BspFNI CGCG 1 cut(s) 2069
BspHI TCATGA 1 cut(s) 1279
BspLI GGNNCC 5 cut(s) 910, 1122, 1566, 1759, 1885
BspQI GCTCTTC 1 cut(s) 330
BspT104I TTCGAA 2 cut(s) 791, 1676
BspTNI GGTCTC 1 cut(s) 2046
BsrBI CCGCTC 1 cut(s) 340
BsrDI GCAATG 1 cut(s) 288
BsrI ACTGG 1 cut(s) 35
BssECI CCNNGG 4 cut(s) 158, 926, 1081, 1747
BssNAI GTATAC 1 cut(s) 537
BssT1I CCWWGG 1 cut(s) 926
Bst1107I GTATAC 1 cut(s) 537
Bst2UI CCWGG 3 cut(s) 586, 830, 1082
Bst4CI ACNGT 6 cut(s) 61, 556, 667, 1295, 1487, 1709
Bst6I CTCTTC 1 cut(s) 330
BstAPI GCANNNNNTGC 1 cut(s) 1820
BstBI TTCGAA 2 cut(s) 791, 1676
BstC8I GCNNGC 1 cut(s) 111
BstDEI CTNAG 6 cut(s) 24, 531, 1371, 1517, 1824, 2043
BstEII GGTNACC 1 cut(s) 488
BstF5I GGATG 9 cut(s) 619, 688, 769, 838, 1189, 1506, 1565, 1588, 1603
BstFNI CGCG 1 cut(s) 2069
BstMAI GTCTC 4 cut(s) 705, 1536, 2046, 2066
BstMWI GCNNNNNNNGC 2 cut(s) 299, 1820
BstNI CCWGG 3 cut(s) 586, 830, 1082
BstPI GGTNACC 1 cut(s) 488
BstSCI CCNGG 5 cut(s) 374, 492, 584, 828, 1080
BstSFI CTRYAG 1 cut(s) 1365
BstUI CGCG 1 cut(s) 2069
BstV1I GCAGC 3 cut(s) 453, 1816, 1894
BstX2I RGATCY 4 cut(s) 1138, 1466, 1564, 1883
BstYI RGATCY 4 cut(s) 1138, 1466, 1564, 1883
BstZ17I GTATAC 1 cut(s) 537
Bsu15I ATCGAT 1 cut(s) 2120
BsuI GTATCC 1 cut(s) 13
BsuRI GGCC 1 cut(s) 584
BsuTUI ATCGAT 1 cut(s) 2120
BtsCI GGATG 9 cut(s) 619, 688, 769, 838, 1189, 1506, 1565, 1588, 1603
BtsI GCAGTG 2 cut(s) 428, 525
BtsIMutI CAGTG 7 cut(s) 57, 428, 525, 948, 1300, 1492, 2128
Cac8I GCNNGC 1 cut(s) 111
CaiI CAGNNNCTG 3 cut(s) 640, 695, 845
CciI TCATGA 1 cut(s) 1279
Cfr13I GGNCC 2 cut(s) 372, 1757
ClaI ATCGAT 1 cut(s) 2120
CseI GACGC 1 cut(s) 701
Csp6I GTAC 2 cut(s) 28, 343
CviQI GTAC 2 cut(s) 28, 343
DdeI CTNAG 6 cut(s) 24, 531, 1371, 1517, 1824, 2043
EaeI YGGCCR 1 cut(s) 582
Eam1104I CTCTTC 1 cut(s) 330
EarI CTCTTC 1 cut(s) 330
EciI GGCGGA 1 cut(s) 128
Eco130I CCWWGG 1 cut(s) 926
Eco24I GRGCYC 1 cut(s) 1005
Eco31I GGTCTC 1 cut(s) 2046
Eco47I GGWCC 2 cut(s) 372, 1757
Eco57I CTGAAG 2 cut(s) 1199, 1608
Eco88I CYCGRG 2 cut(s) 258, 1746
Eco91I GGTNACC 1 cut(s) 488
EcoO109I RGGNCCY 1 cut(s) 1757
EcoO65I GGTNACC 1 cut(s) 488
EcoRI GAATTC 1 cut(s) 1781
EcoRII CCWGG 3 cut(s) 584, 828, 1080
EcoT14I CCWWGG 1 cut(s) 926
EcoT22I ATGCAT 1 cut(s) 1603
EcoT38I GRGCYC 1 cut(s) 1005
ErhI CCWWGG 1 cut(s) 926
Esp3I CGTCTC 1 cut(s) 705
FalI AAGNNNNNCTT 2 cut(s) 737, 769
FaqI GGGAC 5 cut(s) 632, 1004, 1743, 1761, 2117
FauNDI CATATG 1 cut(s) 1575
FbaI TGATCA 1 cut(s) 1252
FblI GTMKAC 1 cut(s) 536
Fnu4HI GCNGC 3 cut(s) 442, 1805, 1908
FokI GGATG 9 cut(s) 626, 695, 776, 845, 1196, 1513, 1572, 1595, 1610
FriOI GRGCYC 1 cut(s) 1005
Fsp4HI GCNGC 3 cut(s) 442, 1805, 1908
FspBI CTAG 5 cut(s) 12, 126, 738, 954, 1023
GluI GCNGC 3 cut(s) 442, 1805, 1908
HaeIII GGCC 1 cut(s) 584
HapII CCGG 2 cut(s) 375, 494
HgaI GACGC 1 cut(s) 701
HincII GTYRAC 1 cut(s) 1099
HindII GTYRAC 1 cut(s) 1099
HpaII CCGG 2 cut(s) 375, 494
HphI GGTGA 3 cut(s) 103, 206, 1855
Hpy166II GTNNAC 4 cut(s) 94, 537, 1099, 1490
Hpy8I GTNNAC 4 cut(s) 94, 537, 1099, 1490
HpyCH4III ACNGT 6 cut(s) 61, 556, 667, 1295, 1487, 1709
HpyCH4V TGCA 6 cut(s) 67, 109, 916, 1601, 1660, 1703
HpyF10VI GCNNNNNNNGC 2 cut(s) 299, 1820
HpyF3I CTNAG 6 cut(s) 24, 531, 1371, 1517, 1824, 2043
Ksp22I TGATCA 1 cut(s) 1252
LguI GCTCTTC 1 cut(s) 330
LmnI GCTCC 4 cut(s) 4, 521, 880, 1085
Lsp1109I GCAGC 3 cut(s) 453, 1816, 1894
LweI GCATC 3 cut(s) 1573, 1588, 1725
MaeI CTAG 5 cut(s) 12, 126, 738, 954, 1023
MaeIII GTNAC 5 cut(s) 488, 835, 1067, 1289, 1665
MbiI CCGCTC 1 cut(s) 340
MflI RGATCY 4 cut(s) 1138, 1466, 1564, 1883
MhlI GDGCHC 1 cut(s) 1005
MlsI TGGCCA 1 cut(s) 584
MluNI TGGCCA 1 cut(s) 584
MlyI GAGTC 5 cut(s) 631, 836, 896, 1442, 1783
Mox20I TGGCCA 1 cut(s) 584
Mph1103I ATGCAT 1 cut(s) 1603
MroXI GAANNNNTTC 3 cut(s) 314, 433, 1793
MscI TGGCCA 1 cut(s) 584
MseI TTAA 5 cut(s) 186, 1320, 1350, 1608, 2088
MslI CAYNNNNRTG 1 cut(s) 62
Msp20I TGGCCA 1 cut(s) 584
MspA1I CMGCKG 1 cut(s) 1807
MspI CCGG 2 cut(s) 375, 494
MspR9I CCNGG 5 cut(s) 376, 494, 586, 830, 1082
MvaI CCWGG 3 cut(s) 586, 830, 1082
MvnI CGCG 1 cut(s) 2069
MwoI GCNNNNNNNGC 2 cut(s) 299, 1820
NciI CCSGG 2 cut(s) 376, 494
NdeI CATATG 1 cut(s) 1575
NlaIV GGNNCC 5 cut(s) 910, 1122, 1566, 1759, 1885
NsiI ATGCAT 1 cut(s) 1603
NspV TTCGAA 2 cut(s) 791, 1676
OliI CACNNNNGTG 1 cut(s) 62
PaeR7I CTCGAG 1 cut(s) 258
PagI TCATGA 1 cut(s) 1279
PciSI GCTCTTC 1 cut(s) 330
PdmI GAANNNNTTC 3 cut(s) 314, 433, 1793
PfeI GAWTC 6 cut(s) 71, 154, 214, 244, 1298, 2057
PflFI GACNNNGTC 1 cut(s) 695
PkrI GCNGC 3 cut(s) 443, 1806, 1909
PleI GAGTC 5 cut(s) 631, 836, 895, 1441, 1782
PpsI GAGTC 5 cut(s) 631, 836, 895, 1441, 1782
PpuMI RGGWCCY 1 cut(s) 1757
Psp5II RGGWCCY 1 cut(s) 1757
Psp6I CCWGG 3 cut(s) 584, 828, 1080
PspEI GGTNACC 1 cut(s) 488
PspGI CCWGG 3 cut(s) 584, 828, 1080
PspN4I GGNNCC 5 cut(s) 910, 1122, 1566, 1759, 1885
PspPI GGNCC 2 cut(s) 372, 1757
PspPPI RGGWCCY 1 cut(s) 1757
PsrI GAACNNNNNNTAC 2 cut(s) 840, 872
PstNI CAGNNNCTG 3 cut(s) 640, 695, 845
PsuI RGATCY 4 cut(s) 1138, 1466, 1564, 1883
PsyI GACNNNGTC 1 cut(s) 695
RsaI GTAC 2 cut(s) 29, 344
RsaNI GTAC 2 cut(s) 28, 343
RseI CAYNNNNRTG 1 cut(s) 62
SapI GCTCTTC 1 cut(s) 330
SaqAI TTAA 5 cut(s) 186, 1320, 1350, 1608, 2088
SatI GCNGC 3 cut(s) 442, 1805, 1908
Sau96I GGNCC 2 cut(s) 372, 1757
ScaI AGTACT 1 cut(s) 29
SchI GAGTC 5 cut(s) 631, 836, 896, 1442, 1783
ScrFI CCNGG 5 cut(s) 376, 494, 586, 830, 1082
SduI GDGCHC 1 cut(s) 1005
SfaNI GCATC 3 cut(s) 1573, 1588, 1725
SfcI CTRYAG 1 cut(s) 1365
Sfr274I CTCGAG 1 cut(s) 258
SfuI TTCGAA 2 cut(s) 791, 1676
SinI GGWCC 2 cut(s) 372, 1757
SlaI CTCGAG 1 cut(s) 258
SmiMI CAYNNNNRTG 1 cut(s) 62
SmlI CTYRAG 2 cut(s) 258, 1616
SmoI CTYRAG 2 cut(s) 258, 1616
SsiI CCGC 5 cut(s) 86, 113, 340, 1807, 2069
SspI AATATT 1 cut(s) 1903
SspMI CTAG 5 cut(s) 12, 126, 738, 954, 1023
StyD4I CCNGG 5 cut(s) 374, 492, 584, 828, 1080
StyI CCWWGG 1 cut(s) 926
TaaI ACNGT 6 cut(s) 61, 556, 667, 1295, 1487, 1709
TaqI TCGA 6 cut(s) 236, 259, 791, 1338, 1676, 2120
TatI WGTACW 1 cut(s) 27
TfiI GAWTC 6 cut(s) 71, 154, 214, 244, 1298, 2057
Tru1I TTAA 5 cut(s) 186, 1320, 1350, 1608, 2088
Tru9I TTAA 5 cut(s) 186, 1320, 1350, 1608, 2088
TscAI CASTG 6 cut(s) 64, 428, 532, 948, 1300, 1492
TseI GCWGC 3 cut(s) 441, 1804, 1907
TspGWI ACGGA 1 cut(s) 1557
TspRI CASTG 6 cut(s) 64, 428, 532, 948, 1300, 1492
Tth111I GACNNNGTC 1 cut(s) 695
VpaK11BI GGWCC 2 cut(s) 372, 1757
XapI RAATTY 7 cut(s) 102, 600, 651, 675, 853, 1355, 1781
XcmI CCANNNNNNNNNTGG 1 cut(s) 2104
XhoI CTCGAG 1 cut(s) 258
XmiI GTMKAC 1 cut(s) 536
XmnI GAANNNNTTC 3 cut(s) 314, 433, 1793
XspI CTAG 5 cut(s) 12, 126, 738, 954, 1023
ZrmI AGTACT 1 cut(s) 29
Zsp2I ATGCAT 1 cut(s) 1603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.