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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61780 AT5G28320 AT5G28400 |
| fragaria_vesca | FvH4_7g16470 FvH4_7g16470 FvH4_7g16470 FvH4_7g16470 FvH4_7g16470 FvH4_7g16531 FvH4_7g16560 |
| malus_domestica | MD01G1081300.v1.1 MD07G1150200.v1.1 MD07G1150300.v1.1 |
| prunus_persica | Prupe.2G189000_v2.0.a1 Prupe.2G189000_v2.0.a1 Prupe.2G189000_v2.0.a1 |
| pyrus_communis | pycom01g10920 pycom07g14870 |
| rosa_chinensis | RchiOBHm_Chr1g0359591 |
| rosa_laevigata | RLG00000027859 |
| rosa_multiflora | Rmu_sc0002556.1_g000023 Rmu_sc0013097.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00296900 |
| rosa_rugosa | Rorug01G0272300 Rorug03G0106700 |
| rosa_samantha | Rh1AG285500 Rh1BG251900 Rh1CG269300 Rh1DG280800 |
| rosa_wichuraiana | Rw1G025400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 340 |
| AccI | GTMKAC | 1 cut(s) | 536 |
| AccII | CGCG | 1 cut(s) | 2069 |
| AciI | CCGC | 5 cut(s) | 86, 113, 340, 1807, 2069 |
| AcoI | YGGCCR | 1 cut(s) | 582 |
| AcsI | RAATTY | 7 cut(s) | 102, 600, 651, 675, 853, 1355, 1781 |
| AcuI | CTGAAG | 2 cut(s) | 1199, 1608 |
| AfaI | GTAC | 2 cut(s) | 29, 344 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 2100 |
| AjnI | CCWGG | 3 cut(s) | 584, 828, 1080 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2002, 2034 |
| AleI | CACNNNNGTG | 1 cut(s) | 62 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1966, 1998 |
| Alw26I | GTCTC | 4 cut(s) | 705, 1536, 2046, 2066 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 640, 695, 845 |
| Ama87I | CYCGRG | 2 cut(s) | 258, 1746 |
| AoxI | GGCC | 1 cut(s) | 582 |
| ApeKI | GCWGC | 3 cut(s) | 441, 1804, 1907 |
| ApoI | RAATTY | 7 cut(s) | 102, 600, 651, 675, 853, 1355, 1781 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2024, 2056 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 314, 433, 1793 |
| AspS9I | GGNCC | 2 cut(s) | 372, 1757 |
| AsuC2I | CCSGG | 2 cut(s) | 376, 494 |
| AsuHPI | GGTGA | 3 cut(s) | 103, 206, 1855 |
| AsuII | TTCGAA | 2 cut(s) | 791, 1676 |
| AvaI | CYCGRG | 2 cut(s) | 258, 1746 |
| AvaII | GGWCC | 2 cut(s) | 372, 1757 |
| BalI | TGGCCA | 1 cut(s) | 584 |
| BamHI | GGATCC | 2 cut(s) | 1564, 1883 |
| BanII | GRGCYC | 1 cut(s) | 1005 |
| BbvI | GCAGC | 3 cut(s) | 453, 1816, 1894 |
| BceAI | ACGGC | 1 cut(s) | 719 |
| BciT130I | CCWGG | 3 cut(s) | 586, 830, 1082 |
| BciVI | GTATCC | 1 cut(s) | 13 |
| BclI | TGATCA | 1 cut(s) | 1252 |
| BcnI | CCSGG | 2 cut(s) | 376, 494 |
| BcoDI | GTCTC | 4 cut(s) | 705, 1536, 2046, 2066 |
| BfaI | CTAG | 5 cut(s) | 12, 126, 738, 954, 1023 |
| BfmI | CTRYAG | 1 cut(s) | 1365 |
| BfuI | GTATCC | 1 cut(s) | 13 |
| BisI | GCNGC | 3 cut(s) | 442, 1805, 1908 |
| BlsI | GCNGC | 3 cut(s) | 443, 1806, 1909 |
| BmcAI | AGTACT | 1 cut(s) | 29 |
| Bme1390I | CCNGG | 5 cut(s) | 376, 494, 586, 830, 1082 |
| Bme18I | GGWCC | 2 cut(s) | 372, 1757 |
| BmeT110I | CYCGRG | 2 cut(s) | 258, 1746 |
| BmgT120I | GGNCC | 2 cut(s) | 372, 1757 |
| BmiI | GGNNCC | 5 cut(s) | 910, 1122, 1566, 1759, 1885 |
| BmrFI | CCNGG | 5 cut(s) | 376, 494, 586, 830, 1082 |
| BmrI | ACTGGG | 1 cut(s) | 40 |
| BmsI | GCATC | 3 cut(s) | 1573, 1588, 1725 |
| BmuI | ACTGGG | 1 cut(s) | 40 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 329, 361 |
| Bpu14I | TTCGAA | 2 cut(s) | 791, 1676 |
| BpuEI | CTTGAG | 1 cut(s) | 1637 |
| BpuMI | CCSGG | 2 cut(s) | 376, 494 |
| Bsa29I | ATCGAT | 1 cut(s) | 2120 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1173, 1888 |
| BsaI | GGTCTC | 1 cut(s) | 2046 |
| BsaJI | CCNNGG | 4 cut(s) | 158, 926, 1081, 1747 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1077, 1107, 1966, 1996 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 2100 |
| Bse1I | ACTGG | 1 cut(s) | 35 |
| Bse3DI | GCAATG | 1 cut(s) | 288 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1173, 1888 |
| BseBI | CCWGG | 3 cut(s) | 586, 830, 1082 |
| BseCI | ATCGAT | 1 cut(s) | 2120 |
| BseDI | CCNNGG | 4 cut(s) | 158, 926, 1081, 1747 |
| BseGI | GGATG | 9 cut(s) | 619, 688, 769, 838, 1189, 1506, 1565, 1588, 1603 |
| BseJI | GATNNNNATC | 2 cut(s) | 1173, 1888 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 2100 |
| BseMI | GCAATG | 1 cut(s) | 288 |
| BseMII | CTCAG | 4 cut(s) | 15, 522, 1815, 2057 |
| BseNI | ACTGG | 1 cut(s) | 35 |
| BseXI | GCAGC | 3 cut(s) | 453, 1816, 1894 |
| BsgI | GTGCAG | 1 cut(s) | 1722 |
| Bsh1236I | CGCG | 1 cut(s) | 2069 |
| BshFI | GGCC | 1 cut(s) | 584 |
| BshVI | ATCGAT | 1 cut(s) | 2120 |
| BsiHKCI | CYCGRG | 2 cut(s) | 258, 1746 |
| BsiSI | CCGG | 2 cut(s) | 375, 494 |
| BslFI | GGGAC | 5 cut(s) | 632, 1004, 1743, 1761, 2117 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 2100 |
| BsmAI | GTCTC | 4 cut(s) | 705, 1536, 2046, 2066 |
| BsmBI | CGTCTC | 1 cut(s) | 705 |
| BsmFI | GGGAC | 5 cut(s) | 632, 1004, 1743, 1761, 2117 |
| BsnI | GGCC | 1 cut(s) | 584 |
| Bso31I | GGTCTC | 1 cut(s) | 2046 |
| BsoBI | CYCGRG | 2 cut(s) | 258, 1746 |
| Bsp119I | TTCGAA | 2 cut(s) | 791, 1676 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1005 |
| BspACI | CCGC | 5 cut(s) | 86, 113, 340, 1807, 2069 |
| BspANI | GGCC | 1 cut(s) | 584 |
| BspCNI | CTCAG | 4 cut(s) | 16, 523, 1816, 2056 |
| BspDI | ATCGAT | 1 cut(s) | 2120 |
| BspFNI | CGCG | 1 cut(s) | 2069 |
| BspHI | TCATGA | 1 cut(s) | 1279 |
| BspLI | GGNNCC | 5 cut(s) | 910, 1122, 1566, 1759, 1885 |
| BspQI | GCTCTTC | 1 cut(s) | 330 |
| BspT104I | TTCGAA | 2 cut(s) | 791, 1676 |
| BspTNI | GGTCTC | 1 cut(s) | 2046 |
| BsrBI | CCGCTC | 1 cut(s) | 340 |
| BsrDI | GCAATG | 1 cut(s) | 288 |
| BsrI | ACTGG | 1 cut(s) | 35 |
| BssECI | CCNNGG | 4 cut(s) | 158, 926, 1081, 1747 |
| BssNAI | GTATAC | 1 cut(s) | 537 |
| BssT1I | CCWWGG | 1 cut(s) | 926 |
| Bst1107I | GTATAC | 1 cut(s) | 537 |
| Bst2UI | CCWGG | 3 cut(s) | 586, 830, 1082 |
| Bst4CI | ACNGT | 6 cut(s) | 61, 556, 667, 1295, 1487, 1709 |
| Bst6I | CTCTTC | 1 cut(s) | 330 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1820 |
| BstBI | TTCGAA | 2 cut(s) | 791, 1676 |
| BstC8I | GCNNGC | 1 cut(s) | 111 |
| BstDEI | CTNAG | 6 cut(s) | 24, 531, 1371, 1517, 1824, 2043 |
| BstEII | GGTNACC | 1 cut(s) | 488 |
| BstF5I | GGATG | 9 cut(s) | 619, 688, 769, 838, 1189, 1506, 1565, 1588, 1603 |
| BstFNI | CGCG | 1 cut(s) | 2069 |
| BstMAI | GTCTC | 4 cut(s) | 705, 1536, 2046, 2066 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 299, 1820 |
| BstNI | CCWGG | 3 cut(s) | 586, 830, 1082 |
| BstPI | GGTNACC | 1 cut(s) | 488 |
| BstSCI | CCNGG | 5 cut(s) | 374, 492, 584, 828, 1080 |
| BstSFI | CTRYAG | 1 cut(s) | 1365 |
| BstUI | CGCG | 1 cut(s) | 2069 |
| BstV1I | GCAGC | 3 cut(s) | 453, 1816, 1894 |
| BstX2I | RGATCY | 4 cut(s) | 1138, 1466, 1564, 1883 |
| BstYI | RGATCY | 4 cut(s) | 1138, 1466, 1564, 1883 |
| BstZ17I | GTATAC | 1 cut(s) | 537 |
| Bsu15I | ATCGAT | 1 cut(s) | 2120 |
| BsuI | GTATCC | 1 cut(s) | 13 |
| BsuRI | GGCC | 1 cut(s) | 584 |
| BsuTUI | ATCGAT | 1 cut(s) | 2120 |
| BtsCI | GGATG | 9 cut(s) | 619, 688, 769, 838, 1189, 1506, 1565, 1588, 1603 |
| BtsI | GCAGTG | 2 cut(s) | 428, 525 |
| BtsIMutI | CAGTG | 7 cut(s) | 57, 428, 525, 948, 1300, 1492, 2128 |
| Cac8I | GCNNGC | 1 cut(s) | 111 |
| CaiI | CAGNNNCTG | 3 cut(s) | 640, 695, 845 |
| CciI | TCATGA | 1 cut(s) | 1279 |
| Cfr13I | GGNCC | 2 cut(s) | 372, 1757 |
| ClaI | ATCGAT | 1 cut(s) | 2120 |
| CseI | GACGC | 1 cut(s) | 701 |
| Csp6I | GTAC | 2 cut(s) | 28, 343 |
| CviQI | GTAC | 2 cut(s) | 28, 343 |
| DdeI | CTNAG | 6 cut(s) | 24, 531, 1371, 1517, 1824, 2043 |
| EaeI | YGGCCR | 1 cut(s) | 582 |
| Eam1104I | CTCTTC | 1 cut(s) | 330 |
| EarI | CTCTTC | 1 cut(s) | 330 |
| EciI | GGCGGA | 1 cut(s) | 128 |
| Eco130I | CCWWGG | 1 cut(s) | 926 |
| Eco24I | GRGCYC | 1 cut(s) | 1005 |
| Eco31I | GGTCTC | 1 cut(s) | 2046 |
| Eco47I | GGWCC | 2 cut(s) | 372, 1757 |
| Eco57I | CTGAAG | 2 cut(s) | 1199, 1608 |
| Eco88I | CYCGRG | 2 cut(s) | 258, 1746 |
| Eco91I | GGTNACC | 1 cut(s) | 488 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1757 |
| EcoO65I | GGTNACC | 1 cut(s) | 488 |
| EcoRI | GAATTC | 1 cut(s) | 1781 |
| EcoRII | CCWGG | 3 cut(s) | 584, 828, 1080 |
| EcoT14I | CCWWGG | 1 cut(s) | 926 |
| EcoT22I | ATGCAT | 1 cut(s) | 1603 |
| EcoT38I | GRGCYC | 1 cut(s) | 1005 |
| ErhI | CCWWGG | 1 cut(s) | 926 |
| Esp3I | CGTCTC | 1 cut(s) | 705 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 737, 769 |
| FaqI | GGGAC | 5 cut(s) | 632, 1004, 1743, 1761, 2117 |
| FauNDI | CATATG | 1 cut(s) | 1575 |
| FbaI | TGATCA | 1 cut(s) | 1252 |
| FblI | GTMKAC | 1 cut(s) | 536 |
| Fnu4HI | GCNGC | 3 cut(s) | 442, 1805, 1908 |
| FokI | GGATG | 9 cut(s) | 626, 695, 776, 845, 1196, 1513, 1572, 1595, 1610 |
| FriOI | GRGCYC | 1 cut(s) | 1005 |
| Fsp4HI | GCNGC | 3 cut(s) | 442, 1805, 1908 |
| FspBI | CTAG | 5 cut(s) | 12, 126, 738, 954, 1023 |
| GluI | GCNGC | 3 cut(s) | 442, 1805, 1908 |
| HaeIII | GGCC | 1 cut(s) | 584 |
| HapII | CCGG | 2 cut(s) | 375, 494 |
| HgaI | GACGC | 1 cut(s) | 701 |
| HincII | GTYRAC | 1 cut(s) | 1099 |
| HindII | GTYRAC | 1 cut(s) | 1099 |
| HpaII | CCGG | 2 cut(s) | 375, 494 |
| HphI | GGTGA | 3 cut(s) | 103, 206, 1855 |
| Hpy166II | GTNNAC | 4 cut(s) | 94, 537, 1099, 1490 |
| Hpy8I | GTNNAC | 4 cut(s) | 94, 537, 1099, 1490 |
| HpyCH4III | ACNGT | 6 cut(s) | 61, 556, 667, 1295, 1487, 1709 |
| HpyCH4V | TGCA | 6 cut(s) | 67, 109, 916, 1601, 1660, 1703 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 299, 1820 |
| HpyF3I | CTNAG | 6 cut(s) | 24, 531, 1371, 1517, 1824, 2043 |
| Ksp22I | TGATCA | 1 cut(s) | 1252 |
| LguI | GCTCTTC | 1 cut(s) | 330 |
| LmnI | GCTCC | 4 cut(s) | 4, 521, 880, 1085 |
| Lsp1109I | GCAGC | 3 cut(s) | 453, 1816, 1894 |
| LweI | GCATC | 3 cut(s) | 1573, 1588, 1725 |
| MaeI | CTAG | 5 cut(s) | 12, 126, 738, 954, 1023 |
| MaeIII | GTNAC | 5 cut(s) | 488, 835, 1067, 1289, 1665 |
| MbiI | CCGCTC | 1 cut(s) | 340 |
| MflI | RGATCY | 4 cut(s) | 1138, 1466, 1564, 1883 |
| MhlI | GDGCHC | 1 cut(s) | 1005 |
| MlsI | TGGCCA | 1 cut(s) | 584 |
| MluNI | TGGCCA | 1 cut(s) | 584 |
| MlyI | GAGTC | 5 cut(s) | 631, 836, 896, 1442, 1783 |
| Mox20I | TGGCCA | 1 cut(s) | 584 |
| Mph1103I | ATGCAT | 1 cut(s) | 1603 |
| MroXI | GAANNNNTTC | 3 cut(s) | 314, 433, 1793 |
| MscI | TGGCCA | 1 cut(s) | 584 |
| MseI | TTAA | 5 cut(s) | 186, 1320, 1350, 1608, 2088 |
| MslI | CAYNNNNRTG | 1 cut(s) | 62 |
| Msp20I | TGGCCA | 1 cut(s) | 584 |
| MspA1I | CMGCKG | 1 cut(s) | 1807 |
| MspI | CCGG | 2 cut(s) | 375, 494 |
| MspR9I | CCNGG | 5 cut(s) | 376, 494, 586, 830, 1082 |
| MvaI | CCWGG | 3 cut(s) | 586, 830, 1082 |
| MvnI | CGCG | 1 cut(s) | 2069 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 299, 1820 |
| NciI | CCSGG | 2 cut(s) | 376, 494 |
| NdeI | CATATG | 1 cut(s) | 1575 |
| NlaIV | GGNNCC | 5 cut(s) | 910, 1122, 1566, 1759, 1885 |
| NsiI | ATGCAT | 1 cut(s) | 1603 |
| NspV | TTCGAA | 2 cut(s) | 791, 1676 |
| OliI | CACNNNNGTG | 1 cut(s) | 62 |
| PaeR7I | CTCGAG | 1 cut(s) | 258 |
| PagI | TCATGA | 1 cut(s) | 1279 |
| PciSI | GCTCTTC | 1 cut(s) | 330 |
| PdmI | GAANNNNTTC | 3 cut(s) | 314, 433, 1793 |
| PfeI | GAWTC | 6 cut(s) | 71, 154, 214, 244, 1298, 2057 |
| PflFI | GACNNNGTC | 1 cut(s) | 695 |
| PkrI | GCNGC | 3 cut(s) | 443, 1806, 1909 |
| PleI | GAGTC | 5 cut(s) | 631, 836, 895, 1441, 1782 |
| PpsI | GAGTC | 5 cut(s) | 631, 836, 895, 1441, 1782 |
| PpuMI | RGGWCCY | 1 cut(s) | 1757 |
| Psp5II | RGGWCCY | 1 cut(s) | 1757 |
| Psp6I | CCWGG | 3 cut(s) | 584, 828, 1080 |
| PspEI | GGTNACC | 1 cut(s) | 488 |
| PspGI | CCWGG | 3 cut(s) | 584, 828, 1080 |
| PspN4I | GGNNCC | 5 cut(s) | 910, 1122, 1566, 1759, 1885 |
| PspPI | GGNCC | 2 cut(s) | 372, 1757 |
| PspPPI | RGGWCCY | 1 cut(s) | 1757 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 840, 872 |
| PstNI | CAGNNNCTG | 3 cut(s) | 640, 695, 845 |
| PsuI | RGATCY | 4 cut(s) | 1138, 1466, 1564, 1883 |
| PsyI | GACNNNGTC | 1 cut(s) | 695 |
| RsaI | GTAC | 2 cut(s) | 29, 344 |
| RsaNI | GTAC | 2 cut(s) | 28, 343 |
| RseI | CAYNNNNRTG | 1 cut(s) | 62 |
| SapI | GCTCTTC | 1 cut(s) | 330 |
| SaqAI | TTAA | 5 cut(s) | 186, 1320, 1350, 1608, 2088 |
| SatI | GCNGC | 3 cut(s) | 442, 1805, 1908 |
| Sau96I | GGNCC | 2 cut(s) | 372, 1757 |
| ScaI | AGTACT | 1 cut(s) | 29 |
| SchI | GAGTC | 5 cut(s) | 631, 836, 896, 1442, 1783 |
| ScrFI | CCNGG | 5 cut(s) | 376, 494, 586, 830, 1082 |
| SduI | GDGCHC | 1 cut(s) | 1005 |
| SfaNI | GCATC | 3 cut(s) | 1573, 1588, 1725 |
| SfcI | CTRYAG | 1 cut(s) | 1365 |
| Sfr274I | CTCGAG | 1 cut(s) | 258 |
| SfuI | TTCGAA | 2 cut(s) | 791, 1676 |
| SinI | GGWCC | 2 cut(s) | 372, 1757 |
| SlaI | CTCGAG | 1 cut(s) | 258 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 62 |
| SmlI | CTYRAG | 2 cut(s) | 258, 1616 |
| SmoI | CTYRAG | 2 cut(s) | 258, 1616 |
| SsiI | CCGC | 5 cut(s) | 86, 113, 340, 1807, 2069 |
| SspI | AATATT | 1 cut(s) | 1903 |
| SspMI | CTAG | 5 cut(s) | 12, 126, 738, 954, 1023 |
| StyD4I | CCNGG | 5 cut(s) | 374, 492, 584, 828, 1080 |
| StyI | CCWWGG | 1 cut(s) | 926 |
| TaaI | ACNGT | 6 cut(s) | 61, 556, 667, 1295, 1487, 1709 |
| TaqI | TCGA | 6 cut(s) | 236, 259, 791, 1338, 1676, 2120 |
| TatI | WGTACW | 1 cut(s) | 27 |
| TfiI | GAWTC | 6 cut(s) | 71, 154, 214, 244, 1298, 2057 |
| Tru1I | TTAA | 5 cut(s) | 186, 1320, 1350, 1608, 2088 |
| Tru9I | TTAA | 5 cut(s) | 186, 1320, 1350, 1608, 2088 |
| TscAI | CASTG | 6 cut(s) | 64, 428, 532, 948, 1300, 1492 |
| TseI | GCWGC | 3 cut(s) | 441, 1804, 1907 |
| TspGWI | ACGGA | 1 cut(s) | 1557 |
| TspRI | CASTG | 6 cut(s) | 64, 428, 532, 948, 1300, 1492 |
| Tth111I | GACNNNGTC | 1 cut(s) | 695 |
| VpaK11BI | GGWCC | 2 cut(s) | 372, 1757 |
| XapI | RAATTY | 7 cut(s) | 102, 600, 651, 675, 853, 1355, 1781 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2104 |
| XhoI | CTCGAG | 1 cut(s) | 258 |
| XmiI | GTMKAC | 1 cut(s) | 536 |
| XmnI | GAANNNNTTC | 3 cut(s) | 314, 433, 1793 |
| XspI | CTAG | 5 cut(s) | 12, 126, 738, 954, 1023 |
| ZrmI | AGTACT | 1 cut(s) | 29 |
| Zsp2I | ATGCAT | 1 cut(s) | 1603 |