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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61780 AT5G28320 AT5G28400 |
| fragaria_vesca | FvH4_7g16470 FvH4_7g16470 FvH4_7g16470 FvH4_7g16470 FvH4_7g16470 FvH4_7g16531 FvH4_7g16560 |
| malus_domestica | MD01G1081300.v1.1 MD07G1150200.v1.1 MD07G1150300.v1.1 |
| prunus_persica | Prupe.2G189000_v2.0.a1 Prupe.2G189000_v2.0.a1 Prupe.2G189000_v2.0.a1 |
| pyrus_communis | pycom01g10920 pycom07g14870 |
| rosa_chinensis | RchiOBHm_Chr1g0359591 |
| rosa_laevigata | RLG00000027859 |
| rosa_multiflora | Rmu_sc0002556.1_g000023 Rmu_sc0013097.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00296900 |
| rosa_rugosa | Rorug01G0272300 Rorug03G0106700 |
| rosa_samantha | Rh1AG285500 Rh1BG251900 Rh1CG269300 Rh1DG280800 |
| rosa_wichuraiana | Rw1G025400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1831 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1192 |
| Acc36I | ACCTGC | 1 cut(s) | 1831 |
| AciI | CCGC | 6 cut(s) | 421, 676, 1968, 2230, 2476, 3414 |
| AclWI | GGATC | 7 cut(s) | 697, 2143, 2228, 2241, 2799, 2807, 3297 |
| AcoI | YGGCCR | 2 cut(s) | 1236, 3181 |
| AcuI | CTGAAG | 4 cut(s) | 225, 1914, 2277, 3533 |
| AcvI | CACGTG | 2 cut(s) | 1250, 3286 |
| AfaI | GTAC | 3 cut(s) | 308, 1486, 3017 |
| AfeI | AGCGCT | 1 cut(s) | 3368 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1042, 1709, 1762, 3488, 3489 |
| AflII | CTTAAG | 1 cut(s) | 2891 |
| AjnI | CCWGG | 5 cut(s) | 36, 1035, 1238, 1755, 2712 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 505, 537, 1541, 1573 |
| AleI | CACNNNNGTG | 1 cut(s) | 1127 |
| Alw26I | GTCTC | 2 cut(s) | 1905, 2735 |
| AlwI | GGATC | 7 cut(s) | 697, 2143, 2228, 2241, 2799, 2807, 3297 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3511 |
| Aor51HI | AGCGCT | 1 cut(s) | 3368 |
| AoxI | GGCC | 3 cut(s) | 1236, 1593, 3181 |
| ApeKI | GCWGC | 3 cut(s) | 1032, 2473, 2825 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2693, 2725 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1050, 1704 |
| AspLEI | GCGC | 2 cut(s) | 1136, 3369 |
| AspS9I | GGNCC | 3 cut(s) | 2426, 2709, 2915 |
| AsuHPI | GGTGA | 9 cut(s) | 43, 181, 191, 257, 457, 560, 712, 815, 1934 |
| AsuNHI | GCTAGC | 1 cut(s) | 2642 |
| AvaII | GGWCC | 3 cut(s) | 2426, 2709, 2915 |
| AxyI | CCTNAGG | 1 cut(s) | 3210 |
| BaeGI | GKGCMC | 1 cut(s) | 3201 |
| BalI | TGGCCA | 2 cut(s) | 1238, 3183 |
| BamHI | GGATCC | 1 cut(s) | 2233 |
| BanII | GRGCYC | 1 cut(s) | 2040 |
| BbrPI | CACGTG | 2 cut(s) | 1250, 3286 |
| BbsI | GAAGAC | 4 cut(s) | 27, 575, 830, 2177 |
| BbvI | GCAGC | 3 cut(s) | 1044, 2485, 2812 |
| BceAI | ACGGC | 1 cut(s) | 3079 |
| BciT130I | CCWGG | 5 cut(s) | 38, 1037, 1240, 1757, 2714 |
| BciVI | GTATCC | 1 cut(s) | 2245 |
| BclI | TGATCA | 1 cut(s) | 3025 |
| BcoDI | GTCTC | 2 cut(s) | 1905, 2735 |
| BfaI | CTAG | 9 cut(s) | 480, 735, 873, 1482, 1553, 1650, 1709, 1799, 2643 |
| BfmI | CTRYAG | 3 cut(s) | 1431, 2433, 2925 |
| BfoI | RGCGCY | 1 cut(s) | 3370 |
| BfrI | CTTAAG | 1 cut(s) | 2891 |
| BfuAI | ACCTGC | 1 cut(s) | 1831 |
| BfuI | GTATCC | 1 cut(s) | 2245 |
| BglII | AGATCT | 4 cut(s) | 393, 648, 2986, 3073 |
| BisI | GCNGC | 4 cut(s) | 1033, 1969, 2474, 2826 |
| BlsI | GCNGC | 4 cut(s) | 1034, 1970, 2475, 2827 |
| BmcAI | AGTACT | 1 cut(s) | 308 |
| Bme1390I | CCNGG | 5 cut(s) | 38, 1037, 1240, 1757, 2714 |
| Bme18I | GGWCC | 3 cut(s) | 2426, 2709, 2915 |
| BmgT120I | GGNCC | 3 cut(s) | 2426, 2709, 2915 |
| BmiI | GGNNCC | 5 cut(s) | 1937, 2235, 2339, 2711, 3087 |
| BmrFI | CCNGG | 5 cut(s) | 38, 1037, 1240, 1757, 2714 |
| BmrI | ACTGGG | 3 cut(s) | 160, 319, 2231 |
| BmsI | GCATC | 5 cut(s) | 1558, 1708, 3015, 3217, 3498 |
| BmtI | GCTAGC | 1 cut(s) | 2646 |
| BmuI | ACTGGG | 3 cut(s) | 160, 319, 2231 |
| BpiI | GAAGAC | 4 cut(s) | 27, 575, 830, 2177 |
| BpuEI | CTTGAG | 5 cut(s) | 418, 673, 2306, 2561, 3054 |
| BsaAI | YACGTR | 3 cut(s) | 1250, 1788, 3286 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2790 |
| BsaJI | CCNNGG | 8 cut(s) | 512, 767, 1275, 1622, 2600, 2712, 2713, 3231 |
| BsaWI | WCCGGW | 2 cut(s) | 595, 850 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1042, 1709, 1762, 3488, 3489 |
| Bse1I | ACTGG | 7 cut(s) | 155, 314, 1080, 1188, 2166, 2226, 3469 |
| Bse21I | CCTNAGG | 1 cut(s) | 3210 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2790 |
| BseBI | CCWGG | 5 cut(s) | 38, 1037, 1240, 1757, 2714 |
| BseDI | CCNNGG | 8 cut(s) | 512, 767, 1275, 1622, 2600, 2712, 2713, 3231 |
| BseJI | GATNNNNATC | 1 cut(s) | 2790 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1042, 1709, 1762, 3488, 3489 |
| BseMII | CTCAG | 5 cut(s) | 93, 1316, 2006, 2820, 3315 |
| BseNI | ACTGG | 7 cut(s) | 155, 314, 1080, 1188, 2166, 2226, 3469 |
| BseRI | GAGGAG | 5 cut(s) | 415, 566, 670, 821, 1000 |
| BseSI | GKGCMC | 1 cut(s) | 3201 |
| BseXI | GCAGC | 3 cut(s) | 1044, 2485, 2812 |
| BseYI | CCCAGC | 2 cut(s) | 2501, 3201 |
| BsgI | GTGCAG | 1 cut(s) | 1238 |
| BshFI | GGCC | 3 cut(s) | 1238, 1595, 3183 |
| BsiSI | CCGG | 4 cut(s) | 440, 596, 695, 851 |
| BslFI | GGGAC | 1 cut(s) | 2695 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1042, 1709, 1762, 3488, 3489 |
| BsmAI | GTCTC | 2 cut(s) | 1905, 2735 |
| BsmFI | GGGAC | 1 cut(s) | 2695 |
| BsmI | GAATGC | 1 cut(s) | 1781 |
| BsnI | GGCC | 3 cut(s) | 1238, 1595, 3183 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2040, 3201 |
| Bsp1407I | TGTACA | 1 cut(s) | 3015 |
| BspACI | CCGC | 6 cut(s) | 421, 676, 1968, 2230, 2476, 3414 |
| BspANI | GGCC | 3 cut(s) | 1238, 1595, 3183 |
| BspCNI | CTCAG | 5 cut(s) | 94, 1315, 2005, 2821, 3316 |
| BspHI | TCATGA | 1 cut(s) | 3028 |
| BspLI | GGNNCC | 5 cut(s) | 1937, 2235, 2339, 2711, 3087 |
| BspMAI | CTGCAG | 1 cut(s) | 1435 |
| BspMI | ACCTGC | 1 cut(s) | 1831 |
| BspOI | GCTAGC | 1 cut(s) | 2646 |
| BspPI | GGATC | 7 cut(s) | 697, 2143, 2228, 2241, 2799, 2807, 3297 |
| BspTI | CTTAAG | 1 cut(s) | 2891 |
| BsrGI | TGTACA | 1 cut(s) | 3015 |
| BsrI | ACTGG | 7 cut(s) | 155, 314, 1080, 1188, 2166, 2226, 3469 |
| BssECI | CCNNGG | 8 cut(s) | 512, 767, 1275, 1622, 2600, 2712, 2713, 3231 |
| BssT1I | CCWWGG | 5 cut(s) | 512, 1275, 1622, 2600, 3231 |
| Bst2UI | CCWGG | 5 cut(s) | 38, 1037, 1240, 1757, 2714 |
| Bst4CI | ACNGT | 6 cut(s) | 288, 2156, 2632, 2651, 2942, 3256 |
| Bst6I | CTCTTC | 3 cut(s) | 945, 1539, 2435 |
| BstAFI | CTTAAG | 1 cut(s) | 2891 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1568 |
| BstAUI | TGTACA | 1 cut(s) | 3015 |
| BstBAI | YACGTR | 3 cut(s) | 1250, 1788, 3286 |
| BstC8I | GCNNGC | 7 cut(s) | 465, 720, 1158, 2644, 2665, 2888, 3479 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1707 |
| BstH2I | RGCGCY | 1 cut(s) | 3370 |
| BstHHI | GCGC | 2 cut(s) | 1136, 3369 |
| BstMAI | GTCTC | 2 cut(s) | 1905, 2735 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 914, 1244, 1568, 1778, 1832, 2335, 3517 |
| BstNI | CCWGG | 5 cut(s) | 38, 1037, 1240, 1757, 2714 |
| BstNSI | RCATGY | 1 cut(s) | 2848 |
| BstSCI | CCNGG | 5 cut(s) | 36, 1035, 1238, 1755, 2712 |
| BstSFI | CTRYAG | 3 cut(s) | 1431, 2433, 2925 |
| BstSLI | GKGCMC | 1 cut(s) | 3201 |
| BstV1I | GCAGC | 3 cut(s) | 1044, 2485, 2812 |
| BstV2I | GAAGAC | 4 cut(s) | 27, 575, 830, 2177 |
| BstX2I | RGATCY | 6 cut(s) | 393, 648, 2135, 2233, 2986, 3073 |
| BstYI | RGATCY | 6 cut(s) | 393, 648, 2135, 2233, 2986, 3073 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3210 |
| BsuI | GTATCC | 1 cut(s) | 2245 |
| BsuRI | GGCC | 3 cut(s) | 1238, 1595, 3183 |
| BtsI | GCAGTG | 1 cut(s) | 1428 |
| BtsIMutI | CAGTG | 6 cut(s) | 1428, 1644, 2161, 2802, 3321, 3478 |
| BveI | ACCTGC | 1 cut(s) | 1831 |
| Cac8I | GCNNGC | 7 cut(s) | 465, 720, 1158, 2644, 2665, 2888, 3479 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3511 |
| CciI | TCATGA | 1 cut(s) | 3028 |
| CfoI | GCGC | 2 cut(s) | 1136, 3369 |
| Cfr13I | GGNCC | 3 cut(s) | 2426, 2709, 2915 |
| CseI | GACGC | 1 cut(s) | 1824 |
| CsiI | ACCWGGT | 1 cut(s) | 1755 |
| Csp6I | GTAC | 3 cut(s) | 307, 1485, 3016 |
| CviQI | GTAC | 3 cut(s) | 307, 1485, 3016 |
| DraI | TTTAAA | 1 cut(s) | 54 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1192 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1192 |
| EaeI | YGGCCR | 2 cut(s) | 1236, 3181 |
| Eam1104I | CTCTTC | 3 cut(s) | 945, 1539, 2435 |
| EarI | CTCTTC | 3 cut(s) | 945, 1539, 2435 |
| Eco130I | CCWWGG | 5 cut(s) | 512, 1275, 1622, 2600, 3231 |
| Eco24I | GRGCYC | 1 cut(s) | 2040 |
| Eco47I | GGWCC | 3 cut(s) | 2426, 2709, 2915 |
| Eco47III | AGCGCT | 1 cut(s) | 3368 |
| Eco57I | CTGAAG | 4 cut(s) | 225, 1914, 2277, 3533 |
| Eco72I | CACGTG | 2 cut(s) | 1250, 3286 |
| Eco81I | CCTNAGG | 1 cut(s) | 3210 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1707 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2426 |
| EcoRI | GAATTC | 2 cut(s) | 215, 2450 |
| EcoRII | CCWGG | 5 cut(s) | 36, 1035, 1238, 1755, 2712 |
| EcoT14I | CCWWGG | 5 cut(s) | 512, 1275, 1622, 2600, 3231 |
| EcoT22I | ATGCAT | 2 cut(s) | 1783, 3190 |
| EcoT38I | GRGCYC | 1 cut(s) | 2040 |
| ErhI | CCWWGG | 5 cut(s) | 512, 1275, 1622, 2600, 3231 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3258, 3290 |
| FaqI | GGGAC | 1 cut(s) | 2695 |
| FauI | CCCGC | 3 cut(s) | 414, 669, 2223 |
| FbaI | TGATCA | 1 cut(s) | 3025 |
| Fnu4HI | GCNGC | 4 cut(s) | 1033, 1969, 2474, 2826 |
| FriOI | GRGCYC | 1 cut(s) | 2040 |
| Fsp4HI | GCNGC | 4 cut(s) | 1033, 1969, 2474, 2826 |
| FspBI | CTAG | 9 cut(s) | 480, 735, 873, 1482, 1553, 1650, 1709, 1799, 2643 |
| GlaI | GCGC | 2 cut(s) | 1135, 3368 |
| GluI | GCNGC | 4 cut(s) | 1033, 1969, 2474, 2826 |
| GsaI | CCCAGC | 2 cut(s) | 2505, 3205 |
| HaeII | RGCGCY | 1 cut(s) | 3370 |
| HaeIII | GGCC | 3 cut(s) | 1238, 1595, 3183 |
| HapII | CCGG | 4 cut(s) | 440, 596, 695, 851 |
| HgaI | GACGC | 1 cut(s) | 1824 |
| HhaI | GCGC | 2 cut(s) | 1136, 3369 |
| Hin6I | GCGC | 2 cut(s) | 1134, 3367 |
| HinP1I | GCGC | 2 cut(s) | 1134, 3367 |
| HindIII | AAGCTT | 1 cut(s) | 2888 |
| HpaII | CCGG | 4 cut(s) | 440, 596, 695, 851 |
| HphI | GGTGA | 9 cut(s) | 43, 181, 191, 257, 457, 560, 712, 815, 1934 |
| Hpy166II | GTNNAC | 6 cut(s) | 34, 448, 703, 2159, 3018, 3419 |
| Hpy8I | GTNNAC | 6 cut(s) | 34, 448, 703, 2159, 3018, 3419 |
| Hpy99I | CGWCG | 1 cut(s) | 2651 |
| HpyCH4III | ACNGT | 6 cut(s) | 288, 2156, 2632, 2651, 2942, 3256 |
| HpyCH4IV | ACGT | 4 cut(s) | 1249, 1672, 1787, 3285 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 914, 1244, 1568, 1778, 1832, 2335, 3517 |
| HpySE526I | ACGT | 4 cut(s) | 1249, 1672, 1787, 3285 |
| HspAI | GCGC | 2 cut(s) | 1134, 3367 |
| Ksp22I | TGATCA | 1 cut(s) | 3025 |
| LmnI | GCTCC | 5 cut(s) | 1941, 2343, 3271, 3333, 3364 |
| Lsp1109I | GCAGC | 3 cut(s) | 1044, 2485, 2812 |
| LweI | GCATC | 5 cut(s) | 1558, 1708, 3015, 3217, 3498 |
| MabI | ACCWGGT | 1 cut(s) | 1755 |
| MaeI | CTAG | 9 cut(s) | 480, 735, 873, 1482, 1553, 1650, 1709, 1799, 2643 |
| MaeII | ACGT | 4 cut(s) | 1249, 1672, 1787, 3285 |
| MaeIII | GTNAC | 5 cut(s) | 146, 1673, 2266, 3250, 3460 |
| MfeI | CAATTG | 1 cut(s) | 1881 |
| MflI | RGATCY | 6 cut(s) | 393, 648, 2135, 2233, 2986, 3073 |
| MhlI | GDGCHC | 2 cut(s) | 2040, 3201 |
| MlsI | TGGCCA | 2 cut(s) | 1238, 3183 |
| MluNI | TGGCCA | 2 cut(s) | 1238, 3183 |
| MlyI | GAGTC | 7 cut(s) | 233, 563, 818, 1445, 2191, 2452, 2735 |
| MmeI | TCCRAC | 4 cut(s) | 257, 616, 871, 1428 |
| Mox20I | TGGCCA | 2 cut(s) | 1238, 3183 |
| Mph1103I | ATGCAT | 2 cut(s) | 1783, 3190 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1050, 1704 |
| MscI | TGGCCA | 2 cut(s) | 1238, 3183 |
| MseI | TTAA | 8 cut(s) | 53, 381, 636, 1145, 1212, 2456, 2757, 2892 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1127 |
| Msp20I | TGGCCA | 2 cut(s) | 1238, 3183 |
| MspA1I | CMGCKG | 2 cut(s) | 2476, 3414 |
| MspCI | CTTAAG | 1 cut(s) | 2891 |
| MspI | CCGG | 4 cut(s) | 440, 596, 695, 851 |
| MspR9I | CCNGG | 5 cut(s) | 38, 1037, 1240, 1757, 2714 |
| MunI | CAATTG | 1 cut(s) | 1881 |
| Mva1269I | GAATGC | 1 cut(s) | 1781 |
| MvaI | CCWGG | 5 cut(s) | 38, 1037, 1240, 1757, 2714 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 914, 1244, 1568, 1778, 1832, 2335, 3517 |
| NheI | GCTAGC | 1 cut(s) | 2642 |
| NlaIV | GGNNCC | 5 cut(s) | 1937, 2235, 2339, 2711, 3087 |
| NmuCI | GTSAC | 2 cut(s) | 1673, 2266 |
| NsiI | ATGCAT | 2 cut(s) | 1783, 3190 |
| NspI | RCATGY | 1 cut(s) | 2848 |
| OliI | CACNNNNGTG | 1 cut(s) | 1127 |
| PagI | TCATGA | 1 cut(s) | 3028 |
| PaqCI | CACCTGC | 1 cut(s) | 1831 |
| PasI | CCCWGGG | 1 cut(s) | 2713 |
| PctI | GAATGC | 1 cut(s) | 1781 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1050, 1704 |
| PkrI | GCNGC | 4 cut(s) | 1034, 1970, 2475, 2827 |
| PleI | GAGTC | 7 cut(s) | 232, 562, 817, 1445, 2190, 2451, 2734 |
| PmaCI | CACGTG | 2 cut(s) | 1250, 3286 |
| PmlI | CACGTG | 2 cut(s) | 1250, 3286 |
| PpsI | GAGTC | 7 cut(s) | 232, 562, 817, 1445, 2190, 2451, 2734 |
| Ppu21I | YACGTR | 3 cut(s) | 1250, 1788, 3286 |
| PpuMI | RGGWCCY | 1 cut(s) | 2426 |
| Psp5II | RGGWCCY | 1 cut(s) | 2426 |
| Psp6I | CCWGG | 5 cut(s) | 36, 1035, 1238, 1755, 2712 |
| PspCI | CACGTG | 2 cut(s) | 1250, 3286 |
| PspFI | CCCAGC | 2 cut(s) | 2501, 3201 |
| PspGI | CCWGG | 5 cut(s) | 36, 1035, 1238, 1755, 2712 |
| PspN4I | GGNNCC | 5 cut(s) | 1937, 2235, 2339, 2711, 3087 |
| PspPI | GGNCC | 3 cut(s) | 2426, 2709, 2915 |
| PspPPI | RGGWCCY | 1 cut(s) | 2426 |
| PstI | CTGCAG | 1 cut(s) | 1435 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3511 |
| PsuI | RGATCY | 6 cut(s) | 393, 648, 2135, 2233, 2986, 3073 |
| RsaI | GTAC | 3 cut(s) | 308, 1486, 3017 |
| RsaNI | GTAC | 3 cut(s) | 307, 1485, 3016 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1127 |
| SaqAI | TTAA | 8 cut(s) | 53, 381, 636, 1145, 1212, 2456, 2757, 2892 |
| SatI | GCNGC | 4 cut(s) | 1033, 1969, 2474, 2826 |
| Sau96I | GGNCC | 3 cut(s) | 2426, 2709, 2915 |
| ScaI | AGTACT | 1 cut(s) | 308 |
| SchI | GAGTC | 7 cut(s) | 233, 563, 818, 1445, 2191, 2452, 2735 |
| ScrFI | CCNGG | 5 cut(s) | 38, 1037, 1240, 1757, 2714 |
| SduI | GDGCHC | 2 cut(s) | 2040, 3201 |
| SexAI | ACCWGGT | 1 cut(s) | 1755 |
| SfaNI | GCATC | 5 cut(s) | 1558, 1708, 3015, 3217, 3498 |
| SfcI | CTRYAG | 3 cut(s) | 1431, 2433, 2925 |
| SinI | GGWCC | 3 cut(s) | 2426, 2709, 2915 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1127 |
| SmlI | CTYRAG | 6 cut(s) | 397, 652, 2285, 2540, 2891, 3069 |
| SmoI | CTYRAG | 6 cut(s) | 397, 652, 2285, 2540, 2891, 3069 |
| SsiI | CCGC | 6 cut(s) | 421, 676, 1968, 2230, 2476, 3414 |
| SspI | AATATT | 1 cut(s) | 2572 |
| SspMI | CTAG | 9 cut(s) | 480, 735, 873, 1482, 1553, 1650, 1709, 1799, 2643 |
| StyD4I | CCNGG | 5 cut(s) | 36, 1035, 1238, 1755, 2712 |
| StyI | CCWWGG | 5 cut(s) | 512, 1275, 1622, 2600, 3231 |
| TaaI | ACNGT | 6 cut(s) | 288, 2156, 2632, 2651, 2942, 3256 |
| TaiI | ACGT | 4 cut(s) | 1252, 1675, 1790, 3288 |
| TaqI | TCGA | 4 cut(s) | 232, 2361, 3009, 3223 |
| TatI | WGTACW | 2 cut(s) | 306, 3015 |
| TauI | GCSGC | 1 cut(s) | 1971 |
| Tru1I | TTAA | 8 cut(s) | 53, 381, 636, 1145, 1212, 2456, 2757, 2892 |
| Tru9I | TTAA | 8 cut(s) | 53, 381, 636, 1145, 1212, 2456, 2757, 2892 |
| TscAI | CASTG | 6 cut(s) | 1435, 1644, 2161, 2809, 3328, 3478 |
| TseFI | GTSAC | 2 cut(s) | 1673, 2266 |
| TseI | GCWGC | 3 cut(s) | 1032, 2473, 2825 |
| Tsp45I | GTSAC | 2 cut(s) | 1673, 2266 |
| TspGWI | ACGGA | 2 cut(s) | 977, 2226 |
| TspRI | CASTG | 6 cut(s) | 1435, 1644, 2161, 2809, 3328, 3478 |
| Vha464I | CTTAAG | 1 cut(s) | 2891 |
| VpaK11BI | GGWCC | 3 cut(s) | 2426, 2709, 2915 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1707 |
| XbaI | TCTAGA | 3 cut(s) | 872, 1552, 1798 |
| XceI | RCATGY | 1 cut(s) | 2848 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1961 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1050, 1704 |
| XspI | CTAG | 9 cut(s) | 480, 735, 873, 1482, 1553, 1650, 1709, 1799, 2643 |
| ZrmI | AGTACT | 1 cut(s) | 308 |
| Zsp2I | ATGCAT | 2 cut(s) | 1783, 3190 |