Rroxscaffold_4G00296900

No description available

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
16919427 .. 16924922
5496 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00296900.1

Sequence Viewer

Length: 3516 bp
ATGGAGCTTCTGTATTCTTCAACCCCAACCAAGCCCAACAGTCTCTCTTTCACTCCACCTTTCCTTACCGGGTTTCCCAATAAGTCTTGGAACCCGAAGAGCACATTTAGATACAGAAAACCCAGCAAAAACCCATCATTTTCAATCTATTTGCTTTCATGTAATAGCACAAAGTTTCAAGCTTTCGCACAATTTGGTCGACCCACGAGCCGCAGGAACTCGCTGAGGAAGAAGCTCATTGAAGACCGAAAGGTGAACCAGAATTCTGTTCCTTTAAACCCAAGTTCTGATTTTCAGCTTTTGAATGGCAATTTTGATGATTCTGAGAGTAAATTGAACTATGATAATGTAAGAGAGAGTGAGTTTAGTAACTGGGTTGCTGATGATAAGGTGAAAGAGGGTGAGTTTAGTAATGATAGTGTAGCTGAAGTTAGTGCATTCAAGGAGTCAAGTCGAAAAGGTTTTGGTGAATCTGTTTTGTTGAGAAAATTGGAGAGTTGGATTGAACAGTATAAGAGAGATAGTGAGTACTGGGGGATTGGTTCTGGTCAGATTTTTACAATTTTTCAAGGTTCTGATGGTAATGTGGAAAGGGTTTTGGTTAATGAGGATGAGATCTTGAGGAGAAGCCGAATTGAGAGGCGGGGATTAGAGGGATCGCCGGAGGTGAACTTGAAAATTTTGCAGGCAGAGAGTTTAGCTAGGGAGATGGAGAGTGGGGCAAATGTGATTCCGAGGAATAGTTCAGTAGCCAAGTTTGTTGTTCAGGGTGAGGAGTCGGGTTTTGTGAAGACAATTCAGGGTTTTACTCTCCAACCGGACTTCTTGCCAAAGCTATCTAGAGTTGGGAGAATGATGGTGTATGTTTTGATTGCGTTGTGGGCATTGAAGAAGTTGTTTGGTTCTGGAAATAAAGAAGAGAAATACACGGAATTGGAGAAGGAAATGATGAGGAGAAAGATGAAAGCAAGACAGGAGAAAGAGGTGTTAGAAAAGGGCAGCCTGGAAGTGGAAGTTGTTCAAGAATCATCAGAAGTGCCACTGGATTCTTTTGAAAAGCCTAATTTAGATAGGAAAGAACTTATGAACACTATTGTGAGCGCAAAGTCGTTAAATGGTAAGCTGGCTTTACAAGATTCTTCAAATTCCATGACCAGTAAGTCATCAAAATTTGATCTTAAAGTGCAGGAGATAAAAAATATGGCCAGGAAAGCACGTGAAATTGAGCAAATGGAACATTCCTTGGTTGGTAATGATAAGAAAGAAACTCAGCCTGTGAATGATGAGTTTTCTGATGAAACCAAAGTTGTTGAACAGCATACAGAAGAAGGGGCAAATACTCTAACTAACCTTTTGGACAGAGTTTGCAGAGAAGCTATGGGTAGTGATAATAACACTGCAGATTTTAGTAAGTTGGACTCTGTTGAGGATGAGGATTTTCAATCTTCTAGTACTTTATATGGAGAAATTTCAGATGATATGCAAAGCACTAAACACCAGAAACATAGTGAAGAGAATGTAGACTTGGCAGATGATGCCCCTTTAGTTGATTCAAAAAAGGCCAAGAATGGTTCTGTTCAAGTAAAACCAAGGGTCATAAGGTCAGTGAAAGAAGCTAGGGAGTATCTTTCTAAGAAACGTGACAAAAATGAAGATTGCCAGACTGAACCTGTTCTACGAAGTGATGCTCTTTCAAGGCTCCAAAGGGATAAAAATGAGAACCAGGTGGGGGATATGGCTAACAATGCATTCAGGTATGCGATTCTAGATGGAACATCAGATTCTCCACCTGCCAAAAATGTGTCCAAAGATTGTAGTCCAAAGGATAAGAATTTTGATGATATAACAATTGAAAAACCTGAAGAAAGTGATGAAGGAGACGAAGGAGACAACATTGGTGATGTTCAAAGGTGCCAATCTTCGTTAGATCATGAAGGTAATGGCGGCATTTCATTGACAGAACCAACTCAGAAACAAGAGAATTGGATAGAGGAAAATTTTAGTGAATTTGAGTCCATAGTTCAGAAGATTGGAGTTGGTTTTAGAGATAATTACATGGTTTCAAGGAAAAAAGAAGATCAAGAATCAAGTACCAATATAGCAGAGCTTGGATCTGATAAGGATGATGACAGTGAACTGGAATGGATGAAAGATGAGAGTCTTAGGGAAATTGTTTTGCAAGTCCGAGAAAATGAACTGGGAGGGCAGGATCCGTTTTATATGATGGATACTGAAGATAAGGTCACATTCTTCAAGGGTCTTGAGAAGAAAGTTGAAAAAGAGAATCAAAAGCTGTCGAAACTGCATGGGTGGCTCCACTCAAACATTGAAAATCTCGATTATGGGGCAGATGGTATCAGCATATATGACCCACCAGAAAAAATTATACCACGCTGGAAAGGTCCTCCTATAGAGAAGAGTCCTGAATTCTTAAATTATTTTCAAGAGCAGCGGAAGGCAATTTTTTCTGAAAATGCTGGGATTTCATATCCTGTCAAGAAAGATGATAACTTGCTTGAGAAGTCAATACCCCAATCCAATGAGAATATTCCAAATTCCTTATCAGCCAATGACCCAAGGAAGAAGAATAAAACAGATTCCAAGACGCTTATAGAAGCTAGCGACGGTTCTGTTAGAGCTGGCAAAAAGTCGGGGAAGGAATTTTGGCAACACACAAAGAAATGGTCCCAGGGATTTGTGGAGTCCTACAATGCAGAGACAGACCCAGAAATTAAAACCACTATGAAGGATATGGGGAAGGATTTGGATCGGTGGATCACTGAAAAAGAAATACAGGAAGCTGCTGAGTTTATGACCAAAATGCCTGAAAAAAGTAAGGAGTTCATGGAAAAGAAACTTAGCAAGCTTAAGAGAGAGATGGAATTGTTTGGACCACAAGCTGTAGTGGGCAAATACCGTGAATATGCAGAAGTGAAGGAAGAAGATTATTTGTGGTGGTTAGATCTTCCTTATGTGCTGTGCATCGAGTTGTACACAGATGATAATGAAGAACAAAGAATAGGATTTTATTCATTGGAGATGGCTCAAGATCTTGAATTGGAACCAAAGCCGTATCATATCATTGGTTTTGAGGACACTAATGACTGCAAAAACCTTTGTTATATCATCCAAGCTCAAATGGAAATGCTTGGGAATGGCCATGCATTTGTTGTGCCCCAGCCACCTAAGGATGTCTTTCGAGATGCCAAGGCAAATGGCTTTGGTGTTACTGTAATTAGAAAAGGGGAACTTCAACTTCACGTGGATCAAACTTTGGAAGAAGTGGAGGAACAGATCACTGAGATTGGGAGCAAAATATACCATGACAGAATTATGCAGGAGCGCTCTATGGATGTAAGCTCATTGATGAAAGGTGTTTTTGGTTTCAGCGGTAAACCTATTAGGAGGAAAAAACCAAAAAAGATGATGAAGGATGTAACTGGTTTCAGTGGCAAGCCCACTAAGAGGAAAAGATCAAAGCAGATGCTGAAGAAGCCTAAACAGAAAGAAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1171

Amino Acids

134.03

Weight (kDa)

5.34

Isoelectric Point (pI)

46.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1798
AasI GACNNNNNNGTC 1 cut(s) 1159
Acc36I ACCTGC 1 cut(s) 1798
AccB1I GGYRCC 1 cut(s) 1911
AccI GTMKAC 2 cut(s) 199, 1521
AciI CCGC 5 cut(s) 211, 643, 1944, 2452, 3390
AclWI GGATC 7 cut(s) 664, 2119, 2204, 2217, 2775, 2783, 3273
AcoI YGGCCR 2 cut(s) 1203, 3157
AcuI CTGAAG 4 cut(s) 447, 1881, 2253, 3509
AcvI CACGTG 2 cut(s) 1217, 3262
AfaI GTAC 4 cut(s) 530, 1453, 2092, 2993
AfeI AGCGCT 1 cut(s) 3344
AfiI CCNNNNNNNGG 3 cut(s) 1009, 1729, 3465
AflII CTTAAG 1 cut(s) 2867
AjnI CCWGG 4 cut(s) 1002, 1205, 1722, 2688
AjuI GAANNNNNNNTTGG 2 cut(s) 1508, 1540
AleI CACNNNNGTG 1 cut(s) 1094
Alw21I GWGCWC 1 cut(s) 104
Alw26I GTCTC 4 cut(s) 47, 1872, 1881, 2711
AlwI GGATC 7 cut(s) 664, 2119, 2204, 2217, 2775, 2783, 3273
AlwNI CAGNNNCTG 1 cut(s) 3487
Aor51HI AGCGCT 1 cut(s) 3344
AoxI GGCC 3 cut(s) 1203, 1560, 3157
ApeKI GCWGC 3 cut(s) 999, 2449, 2801
ArsI GACNNNNNNTTYG 2 cut(s) 2669, 2701
Asp700I GAANNNNTTC 2 cut(s) 1017, 1671
AspLEI GCGC 2 cut(s) 1103, 3345
AspS9I GGNCC 3 cut(s) 2402, 2685, 2891
AsuC2I CCSGG 1 cut(s) 70
AsuHPI GGTGA 7 cut(s) 265, 403, 413, 479, 679, 782, 1910
AsuNHI GCTAGC 1 cut(s) 2618
AvaII GGWCC 3 cut(s) 2402, 2685, 2891
AxyI CCTNAGG 1 cut(s) 3186
BaeGI GKGCMC 1 cut(s) 3177
BalI TGGCCA 2 cut(s) 1205, 3159
BamHI GGATCC 1 cut(s) 2209
BanI GGYRCC 1 cut(s) 1911
BauI CACGAG 1 cut(s) 205
BbrPI CACGTG 2 cut(s) 1217, 3262
BbsI GAAGAC 2 cut(s) 249, 797
Bbv12I GWGCWC 1 cut(s) 104
BbvCI CCTCAGC 1 cut(s) 224
BbvI GCAGC 3 cut(s) 1011, 2461, 2788
BccI CCATC 9 cut(s) 142, 572, 703, 850, 1763, 2218, 2345, 2872, 3034
BceAI ACGGC 1 cut(s) 3055
BciT130I CCWGG 4 cut(s) 1004, 1207, 1724, 2690
BciVI GTATCC 1 cut(s) 2221
BcnI CCSGG 1 cut(s) 70
BcoDI GTCTC 4 cut(s) 47, 1872, 1881, 2711
BfaI CTAG 6 cut(s) 702, 840, 1449, 1617, 1766, 2619
BfmI CTRYAG 3 cut(s) 1398, 2409, 2901
BfoI RGCGCY 1 cut(s) 3346
BfrI CTTAAG 1 cut(s) 2867
BfuAI ACCTGC 1 cut(s) 1798
BfuI GTATCC 1 cut(s) 2221
BglII AGATCT 3 cut(s) 615, 2962, 3049
BisI GCNGC 5 cut(s) 211, 1000, 1945, 2450, 2802
BlsI GCNGC 5 cut(s) 212, 1001, 1946, 2451, 2803
BmcAI AGTACT 2 cut(s) 530, 1453
Bme1390I CCNGG 5 cut(s) 70, 1004, 1207, 1724, 2690
Bme18I GGWCC 3 cut(s) 2402, 2685, 2891
BmgT120I GGNCC 3 cut(s) 2402, 2685, 2891
BmiI GGNNCC 7 cut(s) 92, 1700, 1913, 2211, 2315, 2687, 3063
BmrFI CCNGG 5 cut(s) 70, 1004, 1207, 1724, 2690
BmrI ACTGGG 3 cut(s) 382, 541, 2207
BmsI GCATC 5 cut(s) 1525, 1675, 2991, 3193, 3474
BmtI GCTAGC 1 cut(s) 2622
BmuI ACTGGG 3 cut(s) 382, 541, 2207
BpiI GAAGAC 2 cut(s) 249, 797
Bpu10I CCTNAGC 1 cut(s) 224
BpuEI CTTGAG 4 cut(s) 640, 2282, 2537, 3030
BpuMI CCSGG 1 cut(s) 70
BsaAI YACGTR 2 cut(s) 1217, 3262
BsaBI GATNNNNATC 1 cut(s) 2766
BsaJI CCNNGG 7 cut(s) 734, 1242, 1589, 2576, 2688, 2689, 3207
BsaWI WCCGGW 1 cut(s) 817
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 3 cut(s) 1009, 1729, 3465
Bse1I ACTGG 7 cut(s) 377, 536, 1047, 1155, 2142, 2202, 3445
Bse21I CCTNAGG 1 cut(s) 3186
Bse8I GATNNNNATC 1 cut(s) 2766
BseBI CCWGG 4 cut(s) 1004, 1207, 1724, 2690
BseDI CCNNGG 7 cut(s) 734, 1242, 1589, 2576, 2688, 2689, 3207
BseGI GGATG 8 cut(s) 616, 1435, 2128, 2151, 3126, 3196, 3358, 3439
BseJI GATNNNNATC 1 cut(s) 2766
BseLI CCNNNNNNNGG 3 cut(s) 1009, 1729, 3465
BseMII CTCAG 6 cut(s) 215, 315, 1283, 1982, 2796, 3291
BseNI ACTGG 7 cut(s) 377, 536, 1047, 1155, 2142, 2202, 3445
BseRI GAGGAG 3 cut(s) 637, 788, 967
BseSI GKGCMC 1 cut(s) 3177
BseXI GCAGC 3 cut(s) 1011, 2461, 2788
BseYI CCCAGC 3 cut(s) 122, 2477, 3177
BsgI GTGCAG 1 cut(s) 1205
BshFI GGCC 3 cut(s) 1205, 1562, 3159
BshNI GGYRCC 1 cut(s) 1911
BsiHKAI GWGCWC 1 cut(s) 104
BsiSI CCGG 3 cut(s) 69, 662, 818
BslFI GGGAC 1 cut(s) 2671
BslI CCNNNNNNNGG 3 cut(s) 1009, 1729, 3465
BsmAI GTCTC 4 cut(s) 47, 1872, 1881, 2711
BsmBI CGTCTC 1 cut(s) 1872
BsmFI GGGAC 1 cut(s) 2671
BsmI GAATGC 2 cut(s) 437, 1748
BsnI GGCC 3 cut(s) 1205, 1562, 3159
Bsp1286I GDGCHC 2 cut(s) 104, 3177
Bsp1407I TGTACA 1 cut(s) 2991
BspACI CCGC 5 cut(s) 211, 643, 1944, 2452, 3390
BspANI GGCC 3 cut(s) 1205, 1562, 3159
BspCNI CTCAG 6 cut(s) 216, 316, 1282, 1981, 2797, 3292
BspHI TCATGA 1 cut(s) 1930
BspLI GGNNCC 7 cut(s) 92, 1700, 1913, 2211, 2315, 2687, 3063
BspMAI CTGCAG 1 cut(s) 1402
BspMI ACCTGC 1 cut(s) 1798
BspOI GCTAGC 1 cut(s) 2622
BspPI GGATC 7 cut(s) 664, 2119, 2204, 2217, 2775, 2783, 3273
BspQI GCTCTTC 1 cut(s) 92
BspT107I GGYRCC 1 cut(s) 1911
BspTI CTTAAG 1 cut(s) 2867
BsrGI TGTACA 1 cut(s) 2991
BsrI ACTGG 7 cut(s) 377, 536, 1047, 1155, 2142, 2202, 3445
BssECI CCNNGG 7 cut(s) 734, 1242, 1589, 2576, 2688, 2689, 3207
BssSI CACGAG 1 cut(s) 205
BssT1I CCWWGG 4 cut(s) 1242, 1589, 2576, 3207
Bst2BI CACGAG 1 cut(s) 205
Bst2UI CCWGG 4 cut(s) 1004, 1207, 1724, 2690
Bst4CI ACNGT 6 cut(s) 41, 510, 2132, 2627, 2918, 3232
Bst6I CTCTTC 4 cut(s) 92, 912, 1506, 2411
BstAFI CTTAAG 1 cut(s) 2867
BstAPI GCANNNNNTGC 1 cut(s) 1535
BstAUI TGTACA 1 cut(s) 2991
BstBAI YACGTR 2 cut(s) 1217, 3262
BstC8I GCNNGC 6 cut(s) 687, 1125, 2620, 2641, 2864, 3455
BstF5I GGATG 8 cut(s) 616, 1435, 2128, 2151, 3126, 3196, 3358, 3439
BstH2I RGCGCY 1 cut(s) 3346
BstHHI GCGC 2 cut(s) 1103, 3345
BstMAI GTCTC 4 cut(s) 47, 1872, 1881, 2711
BstMWI GCNNNNNNNGC 6 cut(s) 881, 1211, 1535, 1745, 2311, 3493
BstNI CCWGG 4 cut(s) 1004, 1207, 1724, 2690
BstSCI CCNGG 5 cut(s) 68, 1002, 1205, 1722, 2688
BstSFI CTRYAG 3 cut(s) 1398, 2409, 2901
BstSLI GKGCMC 1 cut(s) 3177
BstV1I GCAGC 3 cut(s) 1011, 2461, 2788
BstV2I GAAGAC 2 cut(s) 249, 797
BstX2I RGATCY 5 cut(s) 615, 2111, 2209, 2962, 3049
BstYI RGATCY 5 cut(s) 615, 2111, 2209, 2962, 3049
Bsu36I CCTNAGG 1 cut(s) 3186
BsuI GTATCC 1 cut(s) 2221
BsuRI GGCC 3 cut(s) 1205, 1562, 3159
BtsCI GGATG 8 cut(s) 616, 1435, 2128, 2151, 3126, 3196, 3358, 3439
BtsI GCAGTG 1 cut(s) 1395
BtsIMutI CAGTG 7 cut(s) 1040, 1395, 1611, 2137, 2778, 3297, 3454
BveI ACCTGC 1 cut(s) 1798
Cac8I GCNNGC 6 cut(s) 687, 1125, 2620, 2641, 2864, 3455
CaiI CAGNNNCTG 1 cut(s) 3487
CciI TCATGA 1 cut(s) 1930
CfoI GCGC 2 cut(s) 1103, 3345
Cfr13I GGNCC 3 cut(s) 2402, 2685, 2891
CseI GACGC 1 cut(s) 2614
CsiI ACCWGGT 1 cut(s) 1722
Csp6I GTAC 4 cut(s) 529, 1452, 2091, 2992
CviAII CATG 8 cut(s) 159, 1150, 1931, 2056, 2306, 2845, 3161, 3323
CviQI GTAC 4 cut(s) 529, 1452, 2091, 2992
DraI TTTAAA 1 cut(s) 276
DrdI GACNNNNNNGTC 1 cut(s) 1159
DseDI GACNNNNNNGTC 1 cut(s) 1159
EaeI YGGCCR 2 cut(s) 1203, 3157
Eam1104I CTCTTC 4 cut(s) 92, 912, 1506, 2411
EarI CTCTTC 4 cut(s) 92, 912, 1506, 2411
Eco130I CCWWGG 4 cut(s) 1242, 1589, 2576, 3207
Eco47I GGWCC 3 cut(s) 2402, 2685, 2891
Eco47III AGCGCT 1 cut(s) 3344
Eco57I CTGAAG 4 cut(s) 447, 1881, 2253, 3509
Eco72I CACGTG 2 cut(s) 1217, 3262
Eco81I CCTNAGG 1 cut(s) 3186
EcoO109I RGGNCCY 1 cut(s) 2402
EcoRI GAATTC 2 cut(s) 262, 2426
EcoRII CCWGG 4 cut(s) 1002, 1205, 1722, 2688
EcoT14I CCWWGG 4 cut(s) 1242, 1589, 2576, 3207
EcoT22I ATGCAT 2 cut(s) 1750, 3166
ErhI CCWWGG 4 cut(s) 1242, 1589, 2576, 3207
Esp3I CGTCTC 1 cut(s) 1872
FaeI CATG 8 cut(s) 162, 1153, 1934, 2059, 2309, 2848, 3164, 3326
FalI AAGNNNNNCTT 4 cut(s) 3179, 3211, 3234, 3266
FaqI GGGAC 1 cut(s) 2671
FatI CATG 8 cut(s) 158, 1149, 1930, 2055, 2305, 2844, 3160, 3322
FauI CCCGC 1 cut(s) 636
FblI GTMKAC 2 cut(s) 199, 1521
Fnu4HI GCNGC 5 cut(s) 211, 1000, 1945, 2450, 2802
FokI GGATG 8 cut(s) 623, 1442, 2135, 2158, 3113, 3203, 3365, 3446
Fsp4HI GCNGC 5 cut(s) 211, 1000, 1945, 2450, 2802
FspBI CTAG 6 cut(s) 702, 840, 1449, 1617, 1766, 2619
GlaI GCGC 2 cut(s) 1102, 3344
GluI GCNGC 5 cut(s) 211, 1000, 1945, 2450, 2802
GsaI CCCAGC 3 cut(s) 126, 2481, 3181
HaeII RGCGCY 1 cut(s) 3346
HaeIII GGCC 3 cut(s) 1205, 1562, 3159
HapII CCGG 3 cut(s) 69, 662, 818
HgaI GACGC 1 cut(s) 2614
HhaI GCGC 2 cut(s) 1103, 3345
Hin1II CATG 8 cut(s) 162, 1153, 1934, 2059, 2309, 2848, 3164, 3326
Hin6I GCGC 2 cut(s) 1101, 3343
HinP1I GCGC 2 cut(s) 1101, 3343
HincII GTYRAC 1 cut(s) 200
HindII GTYRAC 1 cut(s) 200
HindIII AAGCTT 2 cut(s) 180, 2864
HpaII CCGG 3 cut(s) 69, 662, 818
HphI GGTGA 7 cut(s) 265, 403, 413, 479, 679, 782, 1910
Hpy166II GTNNAC 7 cut(s) 200, 256, 670, 1522, 2135, 2994, 3395
Hpy8I GTNNAC 7 cut(s) 200, 256, 670, 1522, 2135, 2994, 3395
Hpy99I CGWCG 1 cut(s) 2627
HpyCH4III ACNGT 6 cut(s) 41, 510, 2132, 2627, 2918, 3232
HpyCH4IV ACGT 3 cut(s) 1216, 1639, 3261
HpyF10VI GCNNNNNNNGC 6 cut(s) 881, 1211, 1535, 1745, 2311, 3493
HpySE526I ACGT 3 cut(s) 1216, 1639, 3261
Hsp92II CATG 8 cut(s) 162, 1153, 1934, 2059, 2309, 2848, 3164, 3326
HspAI GCGC 2 cut(s) 1101, 3343
LguI GCTCTTC 1 cut(s) 92
LmnI GCTCC 5 cut(s) 4, 1704, 2319, 3309, 3340
Lsp1109I GCAGC 3 cut(s) 1011, 2461, 2788
LweI GCATC 5 cut(s) 1525, 1675, 2991, 3193, 3474
MabI ACCWGGT 1 cut(s) 1722
MaeI CTAG 6 cut(s) 702, 840, 1449, 1617, 1766, 2619
MaeII ACGT 3 cut(s) 1216, 1639, 3261
MaeIII GTNAC 5 cut(s) 368, 1640, 2242, 3226, 3436
MfeI CAATTG 1 cut(s) 1848
MflI RGATCY 5 cut(s) 615, 2111, 2209, 2962, 3049
MhlI GDGCHC 2 cut(s) 104, 3177
MlsI TGGCCA 2 cut(s) 1205, 3159
MluNI TGGCCA 2 cut(s) 1205, 3159
MlyI GAGTC 7 cut(s) 455, 785, 1412, 2021, 2167, 2428, 2711
MmeI TCCRAC 3 cut(s) 479, 838, 1395
Mox20I TGGCCA 2 cut(s) 1205, 3159
Mph1103I ATGCAT 2 cut(s) 1750, 3166
MroXI GAANNNNTTC 2 cut(s) 1017, 1671
MscI TGGCCA 2 cut(s) 1205, 3159
MseI TTAA 7 cut(s) 275, 603, 1112, 1179, 2432, 2733, 2868
MslI CAYNNNNRTG 1 cut(s) 1094
Msp20I TGGCCA 2 cut(s) 1205, 3159
MspA1I CMGCKG 2 cut(s) 2452, 3390
MspCI CTTAAG 1 cut(s) 2867
MspI CCGG 3 cut(s) 69, 662, 818
MspR9I CCNGG 5 cut(s) 70, 1004, 1207, 1724, 2690
MunI CAATTG 1 cut(s) 1848
Mva1269I GAATGC 2 cut(s) 437, 1748
MvaI CCWGG 4 cut(s) 1004, 1207, 1724, 2690
MwoI GCNNNNNNNGC 6 cut(s) 881, 1211, 1535, 1745, 2311, 3493
NciI CCSGG 1 cut(s) 70
NheI GCTAGC 1 cut(s) 2618
NlaIII CATG 8 cut(s) 162, 1153, 1934, 2059, 2309, 2848, 3164, 3326
NlaIV GGNNCC 7 cut(s) 92, 1700, 1913, 2211, 2315, 2687, 3063
NmuCI GTSAC 2 cut(s) 1640, 2242
NsiI ATGCAT 2 cut(s) 1750, 3166
OliI CACNNNNGTG 1 cut(s) 1094
PagI TCATGA 1 cut(s) 1930
PaqCI CACCTGC 1 cut(s) 1798
PasI CCCWGGG 1 cut(s) 2689
PciSI GCTCTTC 1 cut(s) 92
PctI GAATGC 2 cut(s) 437, 1748
PdmI GAANNNNTTC 2 cut(s) 1017, 1671
PkrI GCNGC 5 cut(s) 212, 1001, 1946, 2451, 2803
PleI GAGTC 7 cut(s) 454, 784, 1412, 2020, 2166, 2427, 2710
PmaCI CACGTG 2 cut(s) 1217, 3262
PmlI CACGTG 2 cut(s) 1217, 3262
PpsI GAGTC 7 cut(s) 454, 784, 1412, 2020, 2166, 2427, 2710
Ppu21I YACGTR 2 cut(s) 1217, 3262
PpuMI RGGWCCY 1 cut(s) 2402
Psp5II RGGWCCY 1 cut(s) 2402
Psp6I CCWGG 4 cut(s) 1002, 1205, 1722, 2688
PspCI CACGTG 2 cut(s) 1217, 3262
PspFI CCCAGC 3 cut(s) 122, 2477, 3177
PspGI CCWGG 4 cut(s) 1002, 1205, 1722, 2688
PspN4I GGNNCC 7 cut(s) 92, 1700, 1913, 2211, 2315, 2687, 3063
PspPI GGNCC 3 cut(s) 2402, 2685, 2891
PspPPI RGGWCCY 1 cut(s) 2402
PsrI GAACNNNNNNTAC 2 cut(s) 1659, 1691
PstI CTGCAG 1 cut(s) 1402
PstNI CAGNNNCTG 1 cut(s) 3487
PsuI RGATCY 5 cut(s) 615, 2111, 2209, 2962, 3049
RsaI GTAC 4 cut(s) 530, 1453, 2092, 2993
RsaNI GTAC 4 cut(s) 529, 1452, 2091, 2992
RseI CAYNNNNRTG 1 cut(s) 1094
SalI GTCGAC 1 cut(s) 198
SapI GCTCTTC 1 cut(s) 92
SaqAI TTAA 7 cut(s) 275, 603, 1112, 1179, 2432, 2733, 2868
SatI GCNGC 5 cut(s) 211, 1000, 1945, 2450, 2802
Sau96I GGNCC 3 cut(s) 2402, 2685, 2891
ScaI AGTACT 2 cut(s) 530, 1453
SchI GAGTC 7 cut(s) 455, 785, 1412, 2021, 2167, 2428, 2711
ScrFI CCNGG 5 cut(s) 70, 1004, 1207, 1724, 2690
SduI GDGCHC 2 cut(s) 104, 3177
SexAI ACCWGGT 1 cut(s) 1722
SfaNI GCATC 5 cut(s) 1525, 1675, 2991, 3193, 3474
SfcI CTRYAG 3 cut(s) 1398, 2409, 2901
SinI GGWCC 3 cut(s) 2402, 2685, 2891
SmiMI CAYNNNNRTG 1 cut(s) 1094
SmlI CTYRAG 5 cut(s) 619, 2261, 2516, 2867, 3045
SmoI CTYRAG 5 cut(s) 619, 2261, 2516, 2867, 3045
SsiI CCGC 5 cut(s) 211, 643, 1944, 2452, 3390
SspI AATATT 1 cut(s) 2548
SspMI CTAG 6 cut(s) 702, 840, 1449, 1617, 1766, 2619
StyD4I CCNGG 5 cut(s) 68, 1002, 1205, 1722, 2688
StyI CCWWGG 4 cut(s) 1242, 1589, 2576, 3207
TaaI ACNGT 6 cut(s) 41, 510, 2132, 2627, 2918, 3232
TaiI ACGT 3 cut(s) 1219, 1642, 3264
TaqI TCGA 6 cut(s) 199, 454, 2297, 2337, 2985, 3199
TaqII GACCGA 1 cut(s) 261
TatI WGTACW 3 cut(s) 528, 1451, 2991
TauI GCSGC 2 cut(s) 213, 1947
Tru1I TTAA 7 cut(s) 275, 603, 1112, 1179, 2432, 2733, 2868
Tru9I TTAA 7 cut(s) 275, 603, 1112, 1179, 2432, 2733, 2868
TscAI CASTG 7 cut(s) 1047, 1402, 1611, 2137, 2785, 3304, 3454
TseFI GTSAC 2 cut(s) 1640, 2242
TseI GCWGC 3 cut(s) 999, 2449, 2801
Tsp45I GTSAC 2 cut(s) 1640, 2242
TspGWI ACGGA 2 cut(s) 944, 2202
TspRI CASTG 7 cut(s) 1047, 1402, 1611, 2137, 2785, 3304, 3454
Vha464I CTTAAG 1 cut(s) 2867
VpaK11BI GGWCC 3 cut(s) 2402, 2685, 2891
XbaI TCTAGA 2 cut(s) 839, 1765
XmiI GTMKAC 2 cut(s) 199, 1521
XmnI GAANNNNTTC 2 cut(s) 1017, 1671
XspI CTAG 6 cut(s) 702, 840, 1449, 1617, 1766, 2619
ZrmI AGTACT 2 cut(s) 530, 1453
Zsp2I ATGCAT 2 cut(s) 1750, 3166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.