pycom07g16210

Protein of unknown function (DUF1635)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0016393
Physical Location & Seq
Reverse (-)
18639019 .. 18640136
1118 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g16210.1

Sequence Viewer

Length: 918 bp
ATGGTCACACGTGCTATGCGGGGCTCAGCTACAGGCATAAGGGTAGAAAAAAAAGCACTTGGCGCGCAATTGAGCGTCTATAAATGCTTTTGGCCTTGTGTGTTTTGTTCAACGTCCATCATATCACAAGAACTAGAAACCAAAGTATATACTTCCAAGCAACCAACACTAACCCCAATGGAGGTTCAGTGCAGCCCTTTTAGTTGGGAATTCTTCTATCAGGAAGAGGGGATAGAAGAGCTAAGGCATTCTCTTTTGTGCAAAACTTTGGAGCTTGAGACAACAATTTTATCAGCAAAGGAGAAGATTTCAACAAGAGAAGAAGAAATTGTTCGTCTCAAAGATCTCCTCAGCAAAGCCCTCCAAGAGAGAAATGAAGCTGAAGCAAAATGCCAAACCCTAGTTTTGGACAAACTCGTGCTCCAACAAGAGCTACGGAAGCAGCAACAAAAAGATGAGGATAATGAATCAAAAGGCAGTCAATCTAACAAACACTTTACCTCTTCTGACTCCGAAGAAACCATTGTTCCATCTCCGAATTCAGACCCTATTATGATGCCGCCGGCACCATTGTCATCACCCCCGCCACTGCCACTGGCTGCTTTGAAATTGGGAGCTATGAAGCCGTTGCCGGAAAAAGGGAGGCTACTTCAAGCAGTGATTGAAGCCGGACCGCTGCTTCAAACCCTTCTCCTGGCTGGACCGCTGCCTCAGTGGGAGCACCCTCCTCCCCAACTAAAGTACATTGAAATTCCACCGGTTGCCATTTCTCCTCCACCACGGCGACTTCAACACCAAGACTCTTGCAATTGTAGTGGTACTAGTTGTTTCGGTCACAAGGGAAGTTTGGTAAGCTCTGATGATTCTGGTTCTGATTCATTACCCAACACCAAGCGCCGAAAGCTTGTTCTCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1635

Protein Analysis

306

Amino Acids

33.91

Weight (kDa)

6.62

Isoelectric Point (pI)

65.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1635 PF07795 77 - 301 3.2e-67 Protein of unknown function (DUF1635)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016393)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18380
malus_domestica MD01G1100200.v1.1 MD07G1167100.v1.1
prunus_persica Prupe.2G205900_v2.0.a1
pyrus_communis pycom01g12730 pycom07g16210
rosa_chinensis RchiOBHm_Chr1g0362191
rosa_laevigata RLG00000027668
rosa_roxburghii Rroxscaffold_4G00294450
rosa_rugosa Rorug01G0295300
rosa_samantha Rh1AG304900 Rh1BG267700 Rh1CG285900 Rh1DG297700
rosa_wichuraiana Rw1G027120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 565
AccII CGCG 1 cut(s) 65
AciI CCGC 5 cut(s) 19, 560, 584, 674, 704
AcsI RAATTY 3 cut(s) 209, 538, 750
AcuI CTGAAG 1 cut(s) 402
AcvI CACGTG 1 cut(s) 11
AfaI GTAC 2 cut(s) 743, 820
AfiI CCNNNNNNNGG 4 cut(s) 181, 406, 638, 694
AflIII ACRYGT 1 cut(s) 8
AgeI ACCGGT 1 cut(s) 757
AgsI TTSAA 8 cut(s) 111, 312, 607, 653, 665, 683, 749, 791
AhlI ACTAGT 1 cut(s) 821
AjnI CCWGG 1 cut(s) 693
AluBI AGCT 8 cut(s) 29, 241, 274, 380, 433, 617, 855, 904
AluI AGCT 8 cut(s) 29, 241, 274, 380, 433, 617, 855, 904
Alw21I GWGCWC 2 cut(s) 423, 723
Alw26I GTCTC 2 cut(s) 272, 341
AoxI GGCC 1 cut(s) 92
ApeKI GCWGC 5 cut(s) 192, 442, 599, 676, 706
ApoI RAATTY 3 cut(s) 209, 538, 750
AsiGI ACCGGT 1 cut(s) 757
Asp700I GAANNNNTTC 1 cut(s) 330
AspLEI GCGC 3 cut(s) 65, 67, 897
AspS9I GGNCC 2 cut(s) 671, 701
AsuHPI GGTGA 1 cut(s) 570
AvaII GGWCC 2 cut(s) 671, 701
BanI GGYRCC 1 cut(s) 565
BanII GRGCYC 1 cut(s) 26
BauI CACGAG 1 cut(s) 416
BbrPI CACGTG 1 cut(s) 11
Bbv12I GWGCWC 2 cut(s) 423, 723
BbvCI CCTCAGC 1 cut(s) 350
BbvI GCAGC 5 cut(s) 204, 454, 586, 663, 693
BccI CCATC 2 cut(s) 125, 538
BceAI ACGGC 2 cut(s) 610, 797
BciT130I CCWGG 1 cut(s) 695
BcoDI GTCTC 2 cut(s) 272, 341
BcuI ACTAGT 1 cut(s) 821
BfaI CTAG 3 cut(s) 134, 401, 822
BfmI CTRYAG 1 cut(s) 30
BfoI RGCGCY 1 cut(s) 898
BglII AGATCT 1 cut(s) 343
BisI GCNGC 6 cut(s) 193, 443, 560, 600, 677, 707
BlpI GCTNAGC 1 cut(s) 25
BlsI GCNGC 6 cut(s) 194, 444, 561, 601, 678, 708
Bme1390I CCNGG 1 cut(s) 695
Bme18I GGWCC 2 cut(s) 671, 701
BmgT120I GGNCC 2 cut(s) 671, 701
BmiI GGNNCC 1 cut(s) 567
BmrFI CCNGG 1 cut(s) 695
BmsI GCATC 1 cut(s) 546
Bpu10I CCTNAGC 2 cut(s) 242, 350
Bpu1102I GCTNAGC 1 cut(s) 25
BpuEI CTTGAG 1 cut(s) 296
BsaAI YACGTR 1 cut(s) 11
BsaJI CCNNGG 1 cut(s) 779
BsaWI WCCGGW 1 cut(s) 757
BsaXI ACNNNNNCTCC 4 cut(s) 173, 203, 405, 435
Bsc4I CCNNNNNNNGG 4 cut(s) 181, 406, 638, 694
Bse118I RCCGGY 2 cut(s) 562, 757
Bse1I ACTGG 1 cut(s) 600
BseBI CCWGG 1 cut(s) 695
BseDI CCNNGG 1 cut(s) 779
BseLI CCNNNNNNNGG 4 cut(s) 181, 406, 638, 694
BseMII CTCAG 3 cut(s) 39, 364, 725
BseNI ACTGG 1 cut(s) 600
BsePI GCGCGC 1 cut(s) 63
BseRI GAGGAG 3 cut(s) 338, 717, 762
BseXI GCAGC 5 cut(s) 204, 454, 586, 663, 693
BsgI GTGCAG 1 cut(s) 211
Bsh1236I CGCG 1 cut(s) 65
BshFI GGCC 1 cut(s) 94
BshNI GGYRCC 1 cut(s) 565
BshTI ACCGGT 1 cut(s) 757
BsiHKAI GWGCWC 2 cut(s) 423, 723
BsiSI CCGG 4 cut(s) 563, 632, 669, 758
BslI CCNNNNNNNGG 4 cut(s) 181, 406, 638, 694
BsmAI GTCTC 2 cut(s) 272, 341
BsmBI CGTCTC 1 cut(s) 341
BsmI GAATGC 1 cut(s) 247
BsnI GGCC 1 cut(s) 94
Bsp1286I GDGCHC 3 cut(s) 26, 423, 723
Bsp143I GATC 1 cut(s) 343
Bsp1720I GCTNAGC 1 cut(s) 25
BspACI CCGC 5 cut(s) 19, 560, 584, 674, 704
BspANI GGCC 1 cut(s) 94
BspCNI CTCAG 3 cut(s) 38, 363, 724
BspFNI CGCG 1 cut(s) 65
BspLI GGNNCC 1 cut(s) 567
BspQI GCTCTTC 1 cut(s) 231
BspT107I GGYRCC 1 cut(s) 565
BsrFI RCCGGY 2 cut(s) 562, 757
BsrI ACTGG 1 cut(s) 600
BssAI RCCGGY 2 cut(s) 562, 757
BssECI CCNNGG 1 cut(s) 779
BssHII GCGCGC 1 cut(s) 63
BssMI GATC 1 cut(s) 343
BssSI CACGAG 1 cut(s) 416
Bst2BI CACGAG 1 cut(s) 416
Bst2UI CCWGG 1 cut(s) 695
Bst6I CTCTTC 3 cut(s) 219, 231, 508
BstBAI YACGTR 1 cut(s) 11
BstC8I GCNNGC 2 cut(s) 65, 564
BstDEI CTNAG 4 cut(s) 25, 242, 350, 711
BstDSI CCRYGG 1 cut(s) 779
BstFNI CGCG 1 cut(s) 65
BstH2I RGCGCY 1 cut(s) 898
BstHHI GCGC 3 cut(s) 65, 67, 897
BstKTI GATC 1 cut(s) 346
BstMAI GTCTC 2 cut(s) 272, 341
BstMBI GATC 1 cut(s) 343
BstMWI GCNNNNNNNGC 3 cut(s) 62, 439, 901
BstNI CCWGG 1 cut(s) 695
BstSCI CCNGG 1 cut(s) 693
BstSFI CTRYAG 1 cut(s) 30
BstUI CGCG 1 cut(s) 65
BstV1I GCAGC 5 cut(s) 204, 454, 586, 663, 693
BstX2I RGATCY 1 cut(s) 343
BstYI RGATCY 1 cut(s) 343
BsuRI GGCC 1 cut(s) 94
BtgI CCRYGG 1 cut(s) 779
BtsI GCAGTG 2 cut(s) 587, 663
BtsIMutI CAGTG 5 cut(s) 194, 587, 593, 663, 719
Cac8I GCNNGC 2 cut(s) 65, 564
CfoI GCGC 3 cut(s) 65, 67, 897
Cfr10I RCCGGY 2 cut(s) 562, 757
Cfr13I GGNCC 2 cut(s) 671, 701
CpoI CGGWCCG 1 cut(s) 671
CseI GACGC 1 cut(s) 64
Csp6I GTAC 2 cut(s) 742, 819
CspAI ACCGGT 1 cut(s) 757
CspCI CAANNNNNGTGG 2 cut(s) 796, 831
CspI CGGWCCG 1 cut(s) 671
CviQI GTAC 2 cut(s) 742, 819
DdeI CTNAG 4 cut(s) 25, 242, 350, 711
DpnI GATC 1 cut(s) 345
DpnII GATC 1 cut(s) 343
Eam1104I CTCTTC 3 cut(s) 219, 231, 508
EarI CTCTTC 3 cut(s) 219, 231, 508
Eco24I GRGCYC 1 cut(s) 26
Eco47I GGWCC 2 cut(s) 671, 701
Eco57I CTGAAG 1 cut(s) 402
Eco72I CACGTG 1 cut(s) 11
EcoRI GAATTC 2 cut(s) 209, 538
EcoRII CCWGG 1 cut(s) 693
EcoT38I GRGCYC 1 cut(s) 26
Esp3I CGTCTC 1 cut(s) 341
FaiI YATR 8 cut(s) 17, 38, 81, 122, 148, 150, 554, 620
FauI CCCGC 2 cut(s) 12, 591
Fnu4HI GCNGC 6 cut(s) 193, 443, 560, 600, 677, 707
FriOI GRGCYC 1 cut(s) 26
Fsp4HI GCNGC 6 cut(s) 193, 443, 560, 600, 677, 707
FspBI CTAG 3 cut(s) 134, 401, 822
GlaI GCGC 3 cut(s) 64, 66, 896
GluI GCNGC 6 cut(s) 193, 443, 560, 600, 677, 707
HaeII RGCGCY 1 cut(s) 898
HaeIII GGCC 1 cut(s) 94
HapII CCGG 4 cut(s) 563, 632, 669, 758
HgaI GACGC 1 cut(s) 64
HhaI GCGC 3 cut(s) 65, 67, 897
Hin6I GCGC 3 cut(s) 63, 65, 895
HinP1I GCGC 3 cut(s) 63, 65, 895
HindIII AAGCTT 1 cut(s) 902
HinfI GANTC 5 cut(s) 467, 509, 800, 863, 875
HpaII CCGG 4 cut(s) 563, 632, 669, 758
HphI GGTGA 1 cut(s) 570
Hpy188I TCNGA 6 cut(s) 508, 514, 537, 544, 859, 874
Hpy188III TCNNGA 1 cut(s) 221
HpyAV CCTTC 1 cut(s) 698
HpyCH4IV ACGT 2 cut(s) 10, 113
HpyCH4V TGCA 3 cut(s) 192, 261, 807
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 439, 901
HpyF3I CTNAG 4 cut(s) 25, 242, 350, 711
HpySE526I ACGT 2 cut(s) 10, 113
HspAI GCGC 3 cut(s) 63, 65, 895
KroI GCCGGC 1 cut(s) 562
KroNI GCCGGC 1 cut(s) 564
Kzo9I GATC 1 cut(s) 343
LguI GCTCTTC 1 cut(s) 231
LmnI GCTCC 4 cut(s) 271, 426, 614, 718
Lsp1109I GCAGC 5 cut(s) 204, 454, 586, 663, 693
LweI GCATC 1 cut(s) 546
MaeI CTAG 3 cut(s) 134, 401, 822
MaeII ACGT 2 cut(s) 10, 113
MaeIII GTNAC 2 cut(s) 4, 833
MalI GATC 1 cut(s) 345
MboI GATC 1 cut(s) 343
MboII GAAGA 8 cut(s) 205, 236, 248, 316, 332, 335, 495, 527
MfeI CAATTG 2 cut(s) 68, 808
MflI RGATCY 1 cut(s) 343
MhlI GDGCHC 3 cut(s) 26, 423, 723
MluCI AATT 8 cut(s) 68, 209, 285, 327, 538, 608, 750, 808
MlyI GAGTC 2 cut(s) 503, 794
MmeI TCCRAC 1 cut(s) 448
MroNI GCCGGC 1 cut(s) 562
MroXI GAANNNNTTC 1 cut(s) 330
MspA1I CMGCKG 2 cut(s) 676, 706
MspI CCGG 4 cut(s) 563, 632, 669, 758
MspR9I CCNGG 1 cut(s) 695
MunI CAATTG 2 cut(s) 68, 808
Mva1269I GAATGC 1 cut(s) 247
MvaI CCWGG 1 cut(s) 695
MvnI CGCG 1 cut(s) 65
MwoI GCNNNNNNNGC 3 cut(s) 62, 439, 901
NaeI GCCGGC 1 cut(s) 564
NdeII GATC 1 cut(s) 343
NgoMIV GCCGGC 1 cut(s) 562
NlaIV GGNNCC 1 cut(s) 567
NmuCI GTSAC 2 cut(s) 4, 833
PauI GCGCGC 1 cut(s) 63
PciSI GCTCTTC 1 cut(s) 231
PctI GAATGC 1 cut(s) 247
PdiI GCCGGC 1 cut(s) 564
PdmI GAANNNNTTC 1 cut(s) 330
PfeI GAWTC 3 cut(s) 467, 863, 875
PinAI ACCGGT 1 cut(s) 757
PkrI GCNGC 6 cut(s) 194, 444, 561, 601, 678, 708
PleI GAGTC 2 cut(s) 503, 794
PmaCI CACGTG 1 cut(s) 11
PmlI CACGTG 1 cut(s) 11
PpsI GAGTC 2 cut(s) 503, 794
Ppu21I YACGTR 1 cut(s) 11
Psp6I CCWGG 1 cut(s) 693
PspCI CACGTG 1 cut(s) 11
PspGI CCWGG 1 cut(s) 693
PspN4I GGNNCC 1 cut(s) 567
PspPI GGNCC 2 cut(s) 671, 701
PsuI RGATCY 1 cut(s) 343
PteI GCGCGC 1 cut(s) 63
RsaI GTAC 2 cut(s) 743, 820
RsaNI GTAC 2 cut(s) 742, 819
Rsr2I CGGWCCG 1 cut(s) 671
RsrII CGGWCCG 1 cut(s) 671
SapI GCTCTTC 1 cut(s) 231
SatI GCNGC 6 cut(s) 193, 443, 560, 600, 677, 707
Sau3AI GATC 1 cut(s) 343
Sau96I GGNCC 2 cut(s) 671, 701
SchI GAGTC 2 cut(s) 503, 794
ScrFI CCNGG 1 cut(s) 695
SduI GDGCHC 3 cut(s) 26, 423, 723
SfaNI GCATC 1 cut(s) 546
SfcI CTRYAG 1 cut(s) 30
SinI GGWCC 2 cut(s) 671, 701
SmlI CTYRAG 1 cut(s) 275
SmoI CTYRAG 1 cut(s) 275
SpeI ACTAGT 1 cut(s) 821
Sse9I AATT 8 cut(s) 68, 209, 285, 327, 538, 608, 750, 808
SsiI CCGC 5 cut(s) 19, 560, 584, 674, 704
SspMI CTAG 3 cut(s) 134, 401, 822
StyD4I CCNGG 1 cut(s) 693
TaiI ACGT 2 cut(s) 13, 116
TaqII GACCGA 1 cut(s) 821
TasI AATT 8 cut(s) 68, 209, 285, 327, 538, 608, 750, 808
TatI WGTACW 1 cut(s) 741
TauI GCSGC 1 cut(s) 562
TfiI GAWTC 3 cut(s) 467, 863, 875
TscAI CASTG 5 cut(s) 194, 594, 600, 663, 719
TseFI GTSAC 2 cut(s) 4, 833
TseI GCWGC 5 cut(s) 192, 442, 599, 676, 706
Tsp45I GTSAC 2 cut(s) 4, 833
TspDTI ATGAA 4 cut(s) 390, 480, 635, 867
TspGWI ACGGA 1 cut(s) 451
TspRI CASTG 5 cut(s) 194, 594, 600, 663, 719
VpaK11BI GGWCC 2 cut(s) 671, 701
XapI RAATTY 3 cut(s) 209, 538, 750
XmnI GAANNNNTTC 1 cut(s) 330
XspI CTAG 3 cut(s) 134, 401, 822
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.