WD repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07590 AT5G07590 AT5G07590 AT5G07590 |
| fragaria_vesca | FvH4_7g26970 FvH4_7g26970 FvH4_7g26970 |
| malus_domestica | MD01G1177500.v1.1 MD07G1249200.v1.1 |
| prunus_persica | Prupe.2G272800_v2.0.a1 Prupe.2G272800_v2.0.a1 Prupe.2G272800_v2.0.a1 |
| pyrus_communis | pycom01g18800 pycom07g22240 |
| rosa_chinensis | RchiOBHm_Chr1g0373701 |
| rosa_laevigata | RLG00000026807 |
| rosa_multiflora | Rmu_sc0002606.1_g000002 Rmu_sc0010519.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00284060 |
| rosa_rugosa | Rorug01G0379000 Rorug01G0379100 |
| rosa_samantha | Rh1AG388400 Rh1BG352800 Rh1CG365700 Rh1DG383200 |
| rosa_wichuraiana | Rw1G034680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 633, 1214 |
| AccI | GTMKAC | 2 cut(s) | 78, 975 |
| AccII | CGCG | 1 cut(s) | 99 |
| AciI | CCGC | 6 cut(s) | 85, 340, 739, 1045, 1235, 1238 |
| AclWI | GGATC | 4 cut(s) | 1118, 1131, 1142, 1155 |
| AcoI | YGGCCR | 3 cut(s) | 389, 540, 700 |
| AcsI | RAATTY | 2 cut(s) | 776, 1273 |
| AcuI | CTGAAG | 1 cut(s) | 1319 |
| AfaI | GTAC | 3 cut(s) | 378, 1042, 1196 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 288, 407, 429, 994, 995 |
| AflIII | ACRYGT | 2 cut(s) | 379, 1197 |
| AgeI | ACCGGT | 1 cut(s) | 29 |
| AgsI | TTSAA | 3 cut(s) | 551, 748, 1097 |
| AjnI | CCWGG | 1 cut(s) | 1207 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 385, 417 |
| AluBI | AGCT | 4 cut(s) | 153, 865, 1287, 1362 |
| AluI | AGCT | 4 cut(s) | 153, 865, 1287, 1362 |
| Alw21I | GWGCWC | 2 cut(s) | 805, 1160 |
| Alw26I | GTCTC | 1 cut(s) | 696 |
| Alw44I | GTGCAC | 1 cut(s) | 1156 |
| AlwI | GGATC | 4 cut(s) | 1118, 1131, 1142, 1155 |
| AoxI | GGCC | 4 cut(s) | 231, 389, 540, 700 |
| ApaLI | GTGCAC | 1 cut(s) | 1156 |
| ApeKI | GCWGC | 6 cut(s) | 440, 815, 1103, 1136, 1320, 1325 |
| ApoI | RAATTY | 2 cut(s) | 776, 1273 |
| AseI | ATTAAT | 1 cut(s) | 477 |
| AsiGI | ACCGGT | 1 cut(s) | 29 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 183 |
| AspLEI | GCGC | 2 cut(s) | 169, 1325 |
| AspS9I | GGNCC | 3 cut(s) | 32, 232, 266 |
| AsuHPI | GGTGA | 1 cut(s) | 549 |
| AvaII | GGWCC | 2 cut(s) | 32, 266 |
| BaeGI | GKGCMC | 1 cut(s) | 1160 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 206, 239 |
| BalI | TGGCCA | 2 cut(s) | 391, 702 |
| BamHI | GGATCC | 2 cut(s) | 1123, 1147 |
| BanI | GGYRCC | 2 cut(s) | 633, 1214 |
| BanII | GRGCYC | 1 cut(s) | 299 |
| BbsI | GAAGAC | 2 cut(s) | 770, 1283 |
| Bbv12I | GWGCWC | 2 cut(s) | 805, 1160 |
| BbvI | GCAGC | 6 cut(s) | 427, 802, 1090, 1148, 1307, 1312 |
| BccI | CCATC | 5 cut(s) | 422, 620, 953, 1098, 1274 |
| BceAI | ACGGC | 5 cut(s) | 53, 59, 291, 803, 1319 |
| BciT130I | CCWGG | 1 cut(s) | 1209 |
| BcoDI | GTCTC | 1 cut(s) | 696 |
| BfaI | CTAG | 3 cut(s) | 288, 596, 710 |
| BfmI | CTRYAG | 1 cut(s) | 972 |
| BfoI | RGCGCY | 1 cut(s) | 170 |
| BisI | GCNGC | 7 cut(s) | 441, 816, 1104, 1137, 1238, 1321, 1326 |
| BlsI | GCNGC | 7 cut(s) | 442, 817, 1105, 1138, 1239, 1322, 1327 |
| Bme1390I | CCNGG | 1 cut(s) | 1209 |
| Bme18I | GGWCC | 2 cut(s) | 32, 266 |
| BmgT120I | GGNCC | 3 cut(s) | 32, 232, 266 |
| BmiI | GGNNCC | 5 cut(s) | 296, 635, 1125, 1149, 1216 |
| BmrFI | CCNGG | 1 cut(s) | 1209 |
| BmsI | GCATC | 3 cut(s) | 406, 793, 1239 |
| BpiI | GAAGAC | 2 cut(s) | 770, 1283 |
| BsaAI | YACGTR | 1 cut(s) | 1155 |
| BsaI | GGTCTC | 1 cut(s) | 696 |
| BsaJI | CCNNGG | 1 cut(s) | 405 |
| BsaWI | WCCGGW | 1 cut(s) | 29 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 288, 407, 429, 994, 995 |
| Bse118I | RCCGGY | 2 cut(s) | 29, 272 |
| Bse1I | ACTGG | 1 cut(s) | 1183 |
| Bse3DI | GCAATG | 3 cut(s) | 63, 392, 1054 |
| BseBI | CCWGG | 1 cut(s) | 1209 |
| BseDI | CCNNGG | 1 cut(s) | 405 |
| BseGI | GGATG | 3 cut(s) | 397, 1230, 1372 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 288, 407, 429, 994, 995 |
| BseMI | GCAATG | 3 cut(s) | 63, 392, 1054 |
| BseMII | CTCAG | 1 cut(s) | 852 |
| BseNI | ACTGG | 1 cut(s) | 1183 |
| BseSI | GKGCMC | 1 cut(s) | 1160 |
| BseXI | GCAGC | 6 cut(s) | 427, 802, 1090, 1148, 1307, 1312 |
| BsgI | GTGCAG | 3 cut(s) | 143, 1136, 1155 |
| Bsh1236I | CGCG | 1 cut(s) | 99 |
| BshFI | GGCC | 4 cut(s) | 233, 391, 542, 702 |
| BshNI | GGYRCC | 2 cut(s) | 633, 1214 |
| BshTI | ACCGGT | 1 cut(s) | 29 |
| BsiHKAI | GWGCWC | 2 cut(s) | 805, 1160 |
| BsiSI | CCGG | 2 cut(s) | 30, 273 |
| BslFI | GGGAC | 1 cut(s) | 1094 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 288, 407, 429, 994, 995 |
| BsmAI | GTCTC | 1 cut(s) | 696 |
| BsmFI | GGGAC | 1 cut(s) | 1094 |
| BsmI | GAATGC | 1 cut(s) | 1065 |
| BsnI | GGCC | 4 cut(s) | 233, 391, 542, 702 |
| Bso31I | GGTCTC | 1 cut(s) | 696 |
| Bsp1286I | GDGCHC | 3 cut(s) | 299, 805, 1160 |
| Bsp1407I | TGTACA | 2 cut(s) | 376, 1194 |
| Bsp143I | GATC | 3 cut(s) | 1123, 1147, 1261 |
| Bsp68I | TCGCGA | 1 cut(s) | 99 |
| BspACI | CCGC | 6 cut(s) | 85, 340, 739, 1045, 1235, 1238 |
| BspANI | GGCC | 4 cut(s) | 233, 391, 542, 702 |
| BspCNI | CTCAG | 1 cut(s) | 853 |
| BspFNI | CGCG | 1 cut(s) | 99 |
| BspLI | GGNNCC | 5 cut(s) | 296, 635, 1125, 1149, 1216 |
| BspPI | GGATC | 4 cut(s) | 1118, 1131, 1142, 1155 |
| BspT107I | GGYRCC | 2 cut(s) | 633, 1214 |
| BspTNI | GGTCTC | 1 cut(s) | 696 |
| BsrDI | GCAATG | 3 cut(s) | 63, 392, 1054 |
| BsrFI | RCCGGY | 2 cut(s) | 29, 272 |
| BsrGI | TGTACA | 2 cut(s) | 376, 1194 |
| BsrI | ACTGG | 1 cut(s) | 1183 |
| BssAI | RCCGGY | 2 cut(s) | 29, 272 |
| BssECI | CCNNGG | 1 cut(s) | 405 |
| BssMI | GATC | 3 cut(s) | 1123, 1147, 1261 |
| BssT1I | CCWWGG | 1 cut(s) | 405 |
| Bst2UI | CCWGG | 1 cut(s) | 1209 |
| Bst4CI | ACNGT | 5 cut(s) | 349, 569, 796, 1223, 1248 |
| BstAUI | TGTACA | 2 cut(s) | 376, 1194 |
| BstBAI | YACGTR | 1 cut(s) | 1155 |
| BstC8I | GCNNGC | 3 cut(s) | 58, 231, 1058 |
| BstDEI | CTNAG | 2 cut(s) | 861, 866 |
| BstEII | GGTNACC | 1 cut(s) | 555 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 286 |
| BstF5I | GGATG | 3 cut(s) | 397, 1230, 1372 |
| BstFNI | CGCG | 1 cut(s) | 99 |
| BstH2I | RGCGCY | 1 cut(s) | 170 |
| BstHHI | GCGC | 2 cut(s) | 169, 1325 |
| BstKTI | GATC | 3 cut(s) | 1126, 1150, 1264 |
| BstMAI | GTCTC | 1 cut(s) | 696 |
| BstMBI | GATC | 3 cut(s) | 1123, 1147, 1261 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 278, 303, 1026, 1053, 1062, 1331 |
| BstNI | CCWGG | 1 cut(s) | 1209 |
| BstNSI | RCATGY | 5 cut(s) | 252, 375, 383, 1060, 1201 |
| BstPI | GGTNACC | 1 cut(s) | 555 |
| BstSCI | CCNGG | 1 cut(s) | 1207 |
| BstSFI | CTRYAG | 1 cut(s) | 972 |
| BstSLI | GKGCMC | 1 cut(s) | 1160 |
| BstUI | CGCG | 1 cut(s) | 99 |
| BstV1I | GCAGC | 6 cut(s) | 427, 802, 1090, 1148, 1307, 1312 |
| BstV2I | GAAGAC | 2 cut(s) | 770, 1283 |
| BstX2I | RGATCY | 2 cut(s) | 1123, 1147 |
| BstYI | RGATCY | 2 cut(s) | 1123, 1147 |
| BsuRI | GGCC | 4 cut(s) | 233, 391, 542, 702 |
| BtsCI | GGATG | 3 cut(s) | 397, 1230, 1372 |
| BtsI | GCAGTG | 2 cut(s) | 720, 842 |
| BtsIMutI | CAGTG | 4 cut(s) | 574, 720, 842, 1176 |
| BtuMI | TCGCGA | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 3 cut(s) | 58, 231, 1058 |
| CfoI | GCGC | 2 cut(s) | 169, 1325 |
| Cfr10I | RCCGGY | 2 cut(s) | 29, 272 |
| Cfr13I | GGNCC | 3 cut(s) | 32, 232, 266 |
| Csp6I | GTAC | 3 cut(s) | 377, 1041, 1195 |
| CspAI | ACCGGT | 1 cut(s) | 29 |
| CviQI | GTAC | 3 cut(s) | 377, 1041, 1195 |
| DdeI | CTNAG | 2 cut(s) | 861, 866 |
| DpnI | GATC | 3 cut(s) | 1125, 1149, 1263 |
| DpnII | GATC | 3 cut(s) | 1123, 1147, 1261 |
| EaeI | YGGCCR | 3 cut(s) | 389, 540, 700 |
| Eco130I | CCWWGG | 1 cut(s) | 405 |
| Eco24I | GRGCYC | 1 cut(s) | 299 |
| Eco31I | GGTCTC | 1 cut(s) | 696 |
| Eco47I | GGWCC | 2 cut(s) | 32, 266 |
| Eco57I | CTGAAG | 1 cut(s) | 1319 |
| Eco91I | GGTNACC | 1 cut(s) | 555 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 286 |
| EcoO109I | RGGNCCY | 1 cut(s) | 266 |
| EcoO65I | GGTNACC | 1 cut(s) | 555 |
| EcoRI | GAATTC | 1 cut(s) | 1273 |
| EcoRII | CCWGG | 1 cut(s) | 1207 |
| EcoT14I | CCWWGG | 1 cut(s) | 405 |
| EcoT22I | ATGCAT | 1 cut(s) | 786 |
| EcoT38I | GRGCYC | 1 cut(s) | 299 |
| ErhI | CCWWGG | 1 cut(s) | 405 |
| FaqI | GGGAC | 1 cut(s) | 1094 |
| FauI | CCCGC | 3 cut(s) | 732, 1052, 1242 |
| FblI | GTMKAC | 2 cut(s) | 78, 975 |
| Fnu4HI | GCNGC | 7 cut(s) | 441, 816, 1104, 1137, 1238, 1321, 1326 |
| FokI | GGATG | 2 cut(s) | 384, 1217 |
| FriOI | GRGCYC | 1 cut(s) | 299 |
| Fsp4HI | GCNGC | 7 cut(s) | 441, 816, 1104, 1137, 1238, 1321, 1326 |
| FspBI | CTAG | 3 cut(s) | 288, 596, 710 |
| GlaI | GCGC | 2 cut(s) | 168, 1324 |
| GluI | GCNGC | 7 cut(s) | 441, 816, 1104, 1137, 1238, 1321, 1326 |
| HaeII | RGCGCY | 1 cut(s) | 170 |
| HaeIII | GGCC | 4 cut(s) | 233, 391, 542, 702 |
| HapII | CCGG | 2 cut(s) | 30, 273 |
| HhaI | GCGC | 2 cut(s) | 169, 1325 |
| Hin6I | GCGC | 2 cut(s) | 167, 1323 |
| HinP1I | GCGC | 2 cut(s) | 167, 1323 |
| HincII | GTYRAC | 2 cut(s) | 79, 345 |
| HindII | GTYRAC | 2 cut(s) | 79, 345 |
| HinfI | GANTC | 6 cut(s) | 173, 587, 748, 918, 1204, 1346 |
| HpaI | GTTAAC | 1 cut(s) | 345 |
| HpaII | CCGG | 2 cut(s) | 30, 273 |
| HphI | GGTGA | 1 cut(s) | 549 |
| Hpy166II | GTNNAC | 8 cut(s) | 9, 79, 345, 377, 526, 976, 1158, 1203 |
| Hpy188I | TCNGA | 8 cut(s) | 178, 328, 862, 917, 923, 963, 1279, 1366 |
| Hpy188III | TCNNGA | 7 cut(s) | 98, 577, 596, 1072, 1094, 1297, 1343 |
| Hpy8I | GTNNAC | 8 cut(s) | 9, 79, 345, 377, 526, 976, 1158, 1203 |
| Hpy99I | CGWCG | 2 cut(s) | 74, 80 |
| HpyAV | CCTTC | 6 cut(s) | 257, 411, 884, 899, 1114, 1294 |
| HpyCH4III | ACNGT | 5 cut(s) | 349, 569, 796, 1223, 1248 |
| HpyCH4IV | ACGT | 1 cut(s) | 1154 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 278, 303, 1026, 1053, 1062, 1331 |
| HpyF3I | CTNAG | 2 cut(s) | 861, 866 |
| HpySE526I | ACGT | 1 cut(s) | 1154 |
| HspAI | GCGC | 2 cut(s) | 167, 1323 |
| KspAI | GTTAAC | 1 cut(s) | 345 |
| Kzo9I | GATC | 3 cut(s) | 1123, 1147, 1261 |
| LmnI | GCTCC | 3 cut(s) | 294, 808, 1017 |
| Lsp1109I | GCAGC | 6 cut(s) | 427, 802, 1090, 1148, 1307, 1312 |
| LweI | GCATC | 3 cut(s) | 406, 793, 1239 |
| MaeI | CTAG | 3 cut(s) | 288, 596, 710 |
| MaeII | ACGT | 1 cut(s) | 1154 |
| MaeIII | GTNAC | 3 cut(s) | 308, 555, 931 |
| MalI | GATC | 3 cut(s) | 1125, 1149, 1263 |
| MboI | GATC | 3 cut(s) | 1123, 1147, 1261 |
| MboII | GAAGA | 4 cut(s) | 473, 775, 1283, 1331 |
| MflI | RGATCY | 2 cut(s) | 1123, 1147 |
| MhlI | GDGCHC | 3 cut(s) | 299, 805, 1160 |
| MlsI | TGGCCA | 2 cut(s) | 391, 702 |
| MluCI | AATT | 7 cut(s) | 434, 444, 704, 776, 949, 999, 1273 |
| MluNI | TGGCCA | 2 cut(s) | 391, 702 |
| MlyI | GAGTC | 2 cut(s) | 927, 1198 |
| MmeI | TCCRAC | 1 cut(s) | 358 |
| MnlI | CCTC | 4 cut(s) | 7, 603, 624, 978 |
| Mox20I | TGGCCA | 2 cut(s) | 391, 702 |
| Mph1103I | ATGCAT | 1 cut(s) | 786 |
| MroXI | GAANNNNTTC | 1 cut(s) | 183 |
| MscI | TGGCCA | 2 cut(s) | 391, 702 |
| MseI | TTAA | 5 cut(s) | 114, 344, 362, 477, 825 |
| Msp20I | TGGCCA | 2 cut(s) | 391, 702 |
| MspI | CCGG | 2 cut(s) | 30, 273 |
| MspR9I | CCNGG | 1 cut(s) | 1209 |
| Mva1269I | GAATGC | 1 cut(s) | 1065 |
| MvaI | CCWGG | 1 cut(s) | 1209 |
| MvnI | CGCG | 1 cut(s) | 99 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 278, 303, 1026, 1053, 1062, 1331 |
| NdeII | GATC | 3 cut(s) | 1123, 1147, 1261 |
| NlaIV | GGNNCC | 5 cut(s) | 296, 635, 1125, 1149, 1216 |
| NmuCI | GTSAC | 2 cut(s) | 308, 555 |
| NruI | TCGCGA | 1 cut(s) | 99 |
| NsiI | ATGCAT | 1 cut(s) | 786 |
| NspI | RCATGY | 5 cut(s) | 252, 375, 383, 1060, 1201 |
| PaeI | GCATGC | 1 cut(s) | 1060 |
| PciI | ACATGT | 2 cut(s) | 379, 1197 |
| PctI | GAATGC | 1 cut(s) | 1065 |
| PdmI | GAANNNNTTC | 1 cut(s) | 183 |
| PfeI | GAWTC | 4 cut(s) | 173, 587, 748, 1346 |
| PinAI | ACCGGT | 1 cut(s) | 29 |
| PkrI | GCNGC | 7 cut(s) | 442, 817, 1105, 1138, 1239, 1322, 1327 |
| PleI | GAGTC | 2 cut(s) | 926, 1198 |
| PpsI | GAGTC | 2 cut(s) | 926, 1198 |
| Ppu21I | YACGTR | 1 cut(s) | 1155 |
| PpuMI | RGGWCCY | 1 cut(s) | 266 |
| PscI | ACATGT | 2 cut(s) | 379, 1197 |
| PshBI | ATTAAT | 1 cut(s) | 477 |
| Psp5II | RGGWCCY | 1 cut(s) | 266 |
| Psp6I | CCWGG | 1 cut(s) | 1207 |
| PspEI | GGTNACC | 1 cut(s) | 555 |
| PspGI | CCWGG | 1 cut(s) | 1207 |
| PspN4I | GGNNCC | 5 cut(s) | 296, 635, 1125, 1149, 1216 |
| PspPI | GGNCC | 3 cut(s) | 32, 232, 266 |
| PspPPI | RGGWCCY | 1 cut(s) | 266 |
| PsuI | RGATCY | 2 cut(s) | 1123, 1147 |
| RruI | TCGCGA | 1 cut(s) | 99 |
| RsaI | GTAC | 3 cut(s) | 378, 1042, 1196 |
| RsaNI | GTAC | 3 cut(s) | 377, 1041, 1195 |
| SalI | GTCGAC | 1 cut(s) | 77 |
| SaqAI | TTAA | 5 cut(s) | 114, 344, 362, 477, 825 |
| SatI | GCNGC | 7 cut(s) | 441, 816, 1104, 1137, 1238, 1321, 1326 |
| Sau3AI | GATC | 3 cut(s) | 1123, 1147, 1261 |
| Sau96I | GGNCC | 3 cut(s) | 32, 232, 266 |
| SchI | GAGTC | 2 cut(s) | 927, 1198 |
| ScrFI | CCNGG | 1 cut(s) | 1209 |
| SduI | GDGCHC | 3 cut(s) | 299, 805, 1160 |
| SfaNI | GCATC | 3 cut(s) | 406, 793, 1239 |
| SfcI | CTRYAG | 1 cut(s) | 972 |
| SinI | GGWCC | 2 cut(s) | 32, 266 |
| SphI | GCATGC | 1 cut(s) | 1060 |
| Sse9I | AATT | 7 cut(s) | 434, 444, 704, 776, 949, 999, 1273 |
| SsiI | CCGC | 6 cut(s) | 85, 340, 739, 1045, 1235, 1238 |
| SspMI | CTAG | 3 cut(s) | 288, 596, 710 |
| StyD4I | CCNGG | 1 cut(s) | 1207 |
| StyI | CCWWGG | 1 cut(s) | 405 |
| TaaI | ACNGT | 5 cut(s) | 349, 569, 796, 1223, 1248 |
| TaiI | ACGT | 1 cut(s) | 1157 |
| TaqI | TCGA | 3 cut(s) | 78, 159, 1349 |
| TasI | AATT | 7 cut(s) | 434, 444, 704, 776, 949, 999, 1273 |
| TatI | WGTACW | 2 cut(s) | 376, 1194 |
| TauI | GCSGC | 1 cut(s) | 1240 |
| TfiI | GAWTC | 4 cut(s) | 173, 587, 748, 1346 |
| Tru1I | TTAA | 5 cut(s) | 114, 344, 362, 477, 825 |
| Tru9I | TTAA | 5 cut(s) | 114, 344, 362, 477, 825 |
| TscAI | CASTG | 4 cut(s) | 574, 720, 849, 1183 |
| TseFI | GTSAC | 2 cut(s) | 308, 555 |
| TseI | GCWGC | 6 cut(s) | 440, 815, 1103, 1136, 1320, 1325 |
| Tsp45I | GTSAC | 2 cut(s) | 308, 555 |
| TspDTI | ATGAA | 4 cut(s) | 123, 276, 675, 918 |
| TspGWI | ACGGA | 1 cut(s) | 788 |
| TspRI | CASTG | 4 cut(s) | 574, 720, 849, 1183 |
| VneI | GTGCAC | 1 cut(s) | 1156 |
| VpaK11BI | GGWCC | 2 cut(s) | 32, 266 |
| VspI | ATTAAT | 1 cut(s) | 477 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 286 |
| XapI | RAATTY | 2 cut(s) | 776, 1273 |
| XbaI | TCTAGA | 1 cut(s) | 595 |
| XceI | RCATGY | 5 cut(s) | 252, 375, 383, 1060, 1201 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1068 |
| XmiI | GTMKAC | 2 cut(s) | 78, 975 |
| XmnI | GAANNNNTTC | 1 cut(s) | 183 |
| XspI | CTAG | 3 cut(s) | 288, 596, 710 |
| Zsp2I | ATGCAT | 1 cut(s) | 786 |