Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0010080

Physical Location & Seq

Genomic Coordinates Forward (+)

1059266 .. 1063242

Gene Structure 3977 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g01360.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2691 bp

ATGATGAGTTCGGTTGAGGAGAAGCTCAAAACTGGTTGCTTGCTTGATGAGATGAAGCTGCTGAAAGAGCTGCAGGATCACTCTGGGTCCCGGAAGGCTATAAATTCGGAGCTGTGGCACGCCTGTGCCGGCCCGCTTGTCTGTTTGCCGCAGGTTGGGAGTCTGTCGTACTACTTCCCCCAAGGACATAGCGAACAGGTGGCGGTATCGACGAAAAGAACAGCAACCTCACAAATCCCCAACTACCCGAATCTCCCGTCTCAGTTGCTATGTCAAGTTCAAAATGTTACACTGCATGCAGACAAAGAAACCGACGAAATCTATGCACAAATGATCCTTAAACCAGTGAATTCTGAAAAGGATGTCTTCCCGGTATCAGACTTTAGAACGAAGCCTAGCAAGCATCCATCGGAGTTTTTCTGCAAAACTTTGACTGCAAGTGACACAAGCACACATGGGGGCTTCTCCGTGCCGCGTAGGGCAGCAGAAAAGCTCTTTCCTCCGCTGGATTTCACAATGCAACCACCAACCCAAGAGCTTGTTGTCCGAGACTTGCACGACAATACCTGGACATTTCGCCACATTTATCGTGGGCAGCCGAAACGACACCTTCTCACAACTGGATGGAGTGTGTTTGTTGGTGCAAAGAGGCTTAGAGCAGGCGATTCCGTTCTATTTATCAGGGATGAGAAGTCACAGCTCTTGATTGGTGTGAGACGAGCAAATCGTCAGCAAACGACTTTGCCATCATCAGTTTTATCTGCTGATAGCATGCACATTGGTGTCCTTGCTGCTGCTGCTCATGCTGCATCTAATCGAAGTTCATTCACTATATTCTACAATCCAAGGGCATGCCCTTCAGAATTTGTCATACCTCTGGCTACATTCCAGAAGGCTGTATATGGGACACAACTCTCAATTGGCATGAGGTTTGGAATGATGTTCGAGACAGAGGAGTCGGGCAAGCGCAGATATATGGGTACGATAGTTGGTATCAGTGATTTAGATCCGCTGAGATGGCCTGGTTCGAAGTGGCGAAATCTTCAGATAGAGTGGGATGAGCCAGGGTGTTGTGATAAACAGAAAAGGGTTAGTTCATGGGAAATCGAGACTCCGGAAAGTCTCTTCATATTTCCTTCTCTGACTTCAAGTCTTAAAAGACCGATGCACTCTGGATTCTTGGGAGCAGAAACTGAGTGGGGAAATATGATCAAAAGACCTTTCATCCGGGTTCCTGAGATTGGAAACGGGAACTCTTTTCCATACCCGATTTCAAATCTATGTTCAGAACAACTAGTCAATATGCTAATGAAACCTCAACTTGCTAATCATGCCGGAACATTAGCTGCTCTACGGCGGGAATCGGCTTCTAATGCAGATTCAGTAGTAGATATGAAGGCCATGCATGCCAAAATCAACCAAAAGAATCCAGCTGATGGCGTAAACGCAAATGCACCATCTCATGAAATTCCACCAGGAAAGTTGAACACGGCAGCTAAGTTTGGAAGCCAAACACCAGTTGGAAACGGCATCGAGAAGATGAAATTAGAACCTGAATTTTCCGCGGATCAGTTAAGCCAGTTGAATTATGTGGGACATGGCATTGACGATAAATTAGCTACTGGGTTTGCGAGTCCTTATAACCTTGTTAACCAGCTGACATTTGCCAACCAAAACCAAGATGCAGCGCAACTACAAACTAGCCCGCGGCCTATGCAGCCGCCTTTGGAATCACTGCTCTACCACTCACAAACGGATCTACCTCATTCGGATTTCAACGGCATGAACAGTTCACTCCCATTCCTAGACAATGATGAATGCATGTTCTACTCGCCTTGCCAACCCTTTTCCGGGGCATTGAGATCACCGGGGCCTTTGTCTGCATTTGGTTTACCAGATTCTTCAGCTGTTTTAACTGAAGCAAATTCCTCCCTAACTTCAATCGGTCAGGACATGTGGGATAATACCATCATTAATTCAAGCAGCCTGAGAGATTTGTCCGATGAGAGCAACAATCAAAGTGGGATCTATGGCTGTCCTAGCGTTGATGTTGGTAGCGGCTTAAGTACTGTCGTCGACCCTTCTGTTTCAAGCACTATACTCAATGACTTTTCTACGCTGAAGAACGCCAACTTCCAGAATTCTTCAGATTGCTTGGTCAGAAACTTGAGCTCAAGCCAGGATCTTCAGTCGCAGATTACCTCGGCAAGCCTAGGAGACTCTCAGGCTTTCTCCAGGCAAGACCTGGCAGACACCTCCGGCGGTACATCCTCAAGCAATGTAGATCTCGATGAGAGCAGTCTACTGCAGAACAGTTCGTGGCATAAAGTGGTTGTGCCCGTGCGAACCTACACCAAGGTTCAAAAGACGGGATCCGTTGGGAGGTCAATCGACGTTACGAATTTCAAAAACTACGAAGAACTATGCTCTGCAATTGAATGCATGTTTGGACTGAAAGGGCTGCTAAACGATCCAAGAGGTTCAGGGTGGAAATTGGTTTATGTGGATTATGAGAACGACGTTCTACTTGTCGGGGATGATCCTTGGGAGGAATTCGTTGGTTGTGTTCGCTGCATCAGAATCCTTTCGCCTACGGAAGTTCAGCAGATGAGTGAAGAGGGCATGAAGCTTCTGAACAGCGCTGCGATGCAAGGGATGAACGGCACCATGTCCGAAGGTGGGCGTCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0001067 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009888 GO:0009889 GO:0009908 GO:0009942 GO:0010033 GO:0010051 GO:0010154 GO:0010305 GO:0010468 GO:0010556 GO:0016020 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048367 GO:0048507 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

897

Amino Acids

98.45

Weight (kDa)

5.7

Isoelectric Point (pI)

53.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19850 AT1G19850
fragaria_vesca	FvH4_2g38760 FvH4_2g38760 FvH4_2g38760
malus_domestica	MD08G1015500.v1.1 MD15G1014400.v1.1
prunus_persica	Prupe.1G368300_v2.0.a1
pyrus_communis	pycom08g01360 pycom15g01250
rosa_chinensis	RchiOBHm_Chr6g0302551
rosa_laevigata	RLG00000011162
rosa_multiflora	Rmu_sc0007717.1_g000001
rosa_roxburghii	Rroxscaffold_7G00165620
rosa_rugosa	Rorug06G0315000 Rorug06G0315000
rosa_samantha	Rh6AG428300 Rh6BG474400 Rh6CG440400 Rh6DG427400
rosa_wichuraiana	Rw6G037050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1641
AasI	GACNNNNNNGTC	1 cut(s)	955
Acc36I	ACCTGC	1 cut(s)	142
AccB1I	GGYRCC	1 cut(s)	2663
AccB7I	CCANNNNNTGG	1 cut(s)	1436
AccI	GTMKAC	2 cut(s)	2076, 2302
AccII	CGCG	3 cut(s)	475, 1565, 1708
AccIII	TCCGGA	1 cut(s)	1114
AcsI	RAATTY	9 cut(s)	103, 349, 863, 1467, 1556, 1924, 2140, 2401, 2552
AcuI	CTGAAG	7 cut(s)	843, 1028, 1887, 1938, 2130, 2141, 2171
AcyI	GRCGYC	1 cut(s)	2683
AfaI	GTAC	4 cut(s)	170, 982, 2068, 2266
AfeI	AGCGCT	1 cut(s)	2641
AfiI	CCNNNNNNNGG	7 cut(s)	155, 1241, 1436, 1850, 1851, 2382, 2679
AflII	CTTAAG	1 cut(s)	2062
AflIII	ACRYGT	1 cut(s)	1953
AhdI	GACNNNNNGTC	1 cut(s)	1149
AhlI	ACTAGT	1 cut(s)	1294
AjnI	CCWGG	7 cut(s)	566, 1021, 1063, 1474, 2178, 2234, 2244
AjuI	GAANNNNNNNTTGG	2 cut(s)	2430, 2462
AleI	CACNNNNGTG	2 cut(s)	123, 780
Alw21I	GWGCWC	1 cut(s)	2174
Alw26I	GTCTC	7 cut(s)	264, 543, 709, 941, 1103, 1127, 2211
AlwNI	CAGNNNCTG	1 cut(s)	1193
Aor13HI	TCCGGA	1 cut(s)	1114
Aor51HI	AGCGCT	1 cut(s)	2641
AoxI	GGCC	5 cut(s)	130, 1019, 1398, 1709, 1871
ApoI	RAATTY	9 cut(s)	103, 349, 863, 1467, 1556, 1924, 2140, 2401, 2552
ArsI	GACNNNNNNTTYG	2 cut(s)	242, 274
AseI	ATTAAT	1 cut(s)	1974
Asp700I	GAANNNNTTC	1 cut(s)	2584
AspA2I	CCTAGG	1 cut(s)	2212
AspLEI	GCGC	3 cut(s)	969, 1690, 2642
AspS9I	GGNCC	3 cut(s)	87, 131, 1871
AsuC2I	CCSGG	5 cut(s)	91, 371, 1229, 1852, 1869
AsuHPI	GGTGA	1 cut(s)	1857
AsuII	TTCGAA	1 cut(s)	1028
AvaII	GGWCC	1 cut(s)	87
AvrII	CCTAGG	1 cut(s)	2212
BaeGI	GKGCMC	1 cut(s)	2340
BaeI	ACNNNNGTAYC	2 cut(s)	972, 1005
BamHI	GGATCC	1 cut(s)	2372
BanI	GGYRCC	1 cut(s)	2663
BanII	GRGCYC	1 cut(s)	2174
BbsI	GAAGAC	1 cut(s)	358
Bbv12I	GWGCWC	1 cut(s)	2174
BccI	CCATC	7 cut(s)	415, 618, 754, 1011, 1430, 1465, 1976
BceAI	ACGGC	5 cut(s)	1370, 1506, 1543, 1795, 2677
BcgI	CGANNNNNNTGC	2 cut(s)	305, 339
BciT130I	CCWGG	7 cut(s)	568, 1023, 1065, 1476, 2180, 2236, 2246
BclI	TGATCA	1 cut(s)	1209
BcnI	CCSGG	5 cut(s)	91, 371, 1229, 1852, 1869
BcoDI	GTCTC	7 cut(s)	264, 543, 709, 941, 1103, 1127, 2211
BcuI	ACTAGT	1 cut(s)	1294
BfaI	CTAG	6 cut(s)	396, 1295, 1701, 1805, 2040, 2213
BfmI	CTRYAG	2 cut(s)	71, 2306
BfoI	RGCGCY	1 cut(s)	2643
BfrI	CTTAAG	1 cut(s)	2062
BfuAI	ACCTGC	1 cut(s)	142
BglII	AGATCT	1 cut(s)	2284
BlnI	CCTAGG	1 cut(s)	2212
BmcAI	AGTACT	1 cut(s)	2068
Bme18I	GGWCC	1 cut(s)	87
BmeRI	GACNNNNNGTC	1 cut(s)	1149
BmgT120I	GGNCC	3 cut(s)	87, 131, 1871
BmiI	GGNNCC	6 cut(s)	88, 89, 1233, 1872, 2374, 2665
BmrI	ACTGGG	1 cut(s)	1632
BmsI	GCATC	7 cut(s)	412, 818, 1155, 1539, 1672, 2583, 2637
BmuI	ACTGGG	1 cut(s)	1632
BpiI	GAAGAC	1 cut(s)	358
BpmI	CTGGAG	1 cut(s)	2218
Bpu14I	TTCGAA	1 cut(s)	1028
BpuEI	CTTGAG	3 cut(s)	2158, 2188, 2257
BpuMI	CCSGG	5 cut(s)	91, 371, 1229, 1852, 1869
BsaBI	GATNNNNATC	1 cut(s)	1005
BsaHI	GRCGYC	1 cut(s)	2683
BsaWI	WCCGGW	1 cut(s)	1114
Bsc4I	CCNNNNNNNGG	7 cut(s)	155, 1241, 1436, 1850, 1851, 2382, 2679
Bse118I	RCCGGY	1 cut(s)	128
Bse1I	ACTGG	6 cut(s)	37, 344, 625, 1517, 1579, 1627
Bse3DI	GCAATG	1 cut(s)	2284
Bse8I	GATNNNNATC	1 cut(s)	1005
BseAI	TCCGGA	1 cut(s)	1114
BseBI	CCWGG	7 cut(s)	568, 1023, 1065, 1476, 2180, 2236, 2246
BseGI	GGATG	9 cut(s)	367, 403, 629, 691, 1063, 1224, 2267, 2542, 2661
BseJI	GATNNNNATC	1 cut(s)	1005
BseLI	CCNNNNNNNGG	7 cut(s)	155, 1241, 1436, 1850, 1851, 2382, 2679
BseMI	GCAATG	1 cut(s)	2284
BseMII	CTCAG	6 cut(s)	275, 1004, 1185, 1227, 1979, 2237
BseNI	ACTGG	6 cut(s)	37, 344, 625, 1517, 1579, 1627
BseRI	GAGGAG	2 cut(s)	32, 968
BseSI	GKGCMC	1 cut(s)	2340
Bsh1236I	CGCG	3 cut(s)	475, 1565, 1708
BshFI	GGCC	5 cut(s)	132, 1021, 1400, 1711, 1873
BshNI	GGYRCC	1 cut(s)	2663
BsiHKAI	GWGCWC	1 cut(s)	2174
BsiSI	CCGG	9 cut(s)	91, 129, 371, 1115, 1228, 1335, 1851, 1868, 2259
BslFI	GGGAC	3 cut(s)	73, 919, 1608
BslI	CCNNNNNNNGG	7 cut(s)	155, 1241, 1436, 1850, 1851, 2382, 2679
BsmAI	GTCTC	7 cut(s)	264, 543, 709, 941, 1103, 1127, 2211
BsmBI	CGTCTC	2 cut(s)	264, 709
BsmFI	GGGAC	3 cut(s)	73, 919, 1608
BsmI	GAATGC	2 cut(s)	1823, 2444
BsnI	GGCC	5 cut(s)	132, 1021, 1400, 1711, 1873
Bsp119I	TTCGAA	1 cut(s)	1028
Bsp1286I	GDGCHC	2 cut(s)	2174, 2340
Bsp13I	TCCGGA	1 cut(s)	1114
BspANI	GGCC	5 cut(s)	132, 1021, 1400, 1711, 1873
BspCNI	CTCAG	6 cut(s)	274, 1005, 1186, 1228, 1980, 2236
BspEI	TCCGGA	1 cut(s)	1114
BspFNI	CGCG	3 cut(s)	475, 1565, 1708
BspHI	TCATGA	1 cut(s)	1462
BspLI	GGNNCC	6 cut(s)	88, 89, 1233, 1872, 2374, 2665
BspMAI	CTGCAG	2 cut(s)	75, 2310
BspMI	ACCTGC	1 cut(s)	142
BspT104I	TTCGAA	1 cut(s)	1028
BspT107I	GGYRCC	1 cut(s)	2663
BspTI	CTTAAG	1 cut(s)	2062
BsrDI	GCAATG	1 cut(s)	2284
BsrFI	RCCGGY	1 cut(s)	128
BsrI	ACTGG	6 cut(s)	37, 344, 625, 1517, 1579, 1627
BssAI	RCCGGY	1 cut(s)	128
BssNI	GRCGYC	1 cut(s)	2683
BssT1I	CCWWGG	5 cut(s)	181, 845, 2212, 2355, 2543
Bst2UI	CCWGG	7 cut(s)	568, 1023, 1065, 1476, 2180, 2236, 2246
Bst4CI	ACNGT	3 cut(s)	1790, 2071, 2315
Bst6I	CTCTTC	2 cut(s)	1130, 2610
BstACI	GRCGYC	1 cut(s)	2683
BstAFI	CTTAAG	1 cut(s)	2062
BstBI	TTCGAA	1 cut(s)	1028
BstDEI	CTNAG	8 cut(s)	261, 653, 1013, 1194, 1236, 1497, 1988, 2223
BstDSI	CCRYGG	2 cut(s)	1563, 1706
BstF5I	GGATG	9 cut(s)	367, 403, 629, 691, 1063, 1224, 2267, 2542, 2661
BstFNI	CGCG	3 cut(s)	475, 1565, 1708
BstH2I	RGCGCY	1 cut(s)	2643
BstHHI	GCGC	3 cut(s)	969, 1690, 2642
BstMAI	GTCTC	7 cut(s)	264, 543, 709, 941, 1103, 1127, 2211
BstNI	CCWGG	7 cut(s)	568, 1023, 1065, 1476, 2180, 2236, 2246
BstNSI	RCATGY	7 cut(s)	299, 775, 855, 1409, 1825, 1957, 2446
BstSFI	CTRYAG	2 cut(s)	71, 2306
BstSLI	GKGCMC	1 cut(s)	2340
BstUI	CGCG	3 cut(s)	475, 1565, 1708
BstV2I	GAAGAC	1 cut(s)	358
BstX2I	RGATCY	6 cut(s)	1006, 1756, 2025, 2182, 2284, 2372
BstYI	RGATCY	6 cut(s)	1006, 1756, 2025, 2182, 2284, 2372
BsuRI	GGCC	5 cut(s)	132, 1021, 1400, 1711, 1873
BtgI	CCRYGG	2 cut(s)	1563, 1706
BtgZI	GCGATG	1 cut(s)	2660
BtsCI	GGATG	9 cut(s)	367, 403, 629, 691, 1063, 1224, 2267, 2542, 2661
BtsI	GCAGTG	2 cut(s)	290, 1733
BtsIMutI	CAGTG	4 cut(s)	290, 351, 1003, 1733
BveI	ACCTGC	1 cut(s)	142
CaiI	CAGNNNCTG	1 cut(s)	1193
CciI	TCATGA	1 cut(s)	1462
CfoI	GCGC	3 cut(s)	969, 1690, 2642
Cfr10I	RCCGGY	1 cut(s)	128
Cfr13I	GGNCC	3 cut(s)	87, 131, 1871
Cfr42I	CCGCGG	2 cut(s)	1566, 1709
CseI	GACGC	1 cut(s)	2672
Csp6I	GTAC	4 cut(s)	169, 981, 2067, 2265
CspCI	CAANNNNNGTGG	2 cut(s)	2002, 2037
CviQI	GTAC	4 cut(s)	169, 981, 2067, 2265
DdeI	CTNAG	8 cut(s)	261, 653, 1013, 1194, 1236, 1497, 1988, 2223
DrdI	GACNNNNNNGTC	1 cut(s)	955
DriI	GACNNNNNGTC	1 cut(s)	1149
DseDI	GACNNNNNNGTC	1 cut(s)	955
Eam1104I	CTCTTC	2 cut(s)	1130, 2610
Eam1105I	GACNNNNNGTC	1 cut(s)	1149
EarI	CTCTTC	2 cut(s)	1130, 2610
Ecl136II	GAGCTC	1 cut(s)	2172
Eco130I	CCWWGG	5 cut(s)	181, 845, 2212, 2355, 2543
Eco24I	GRGCYC	1 cut(s)	2174
Eco47I	GGWCC	1 cut(s)	87
Eco47III	AGCGCT	1 cut(s)	2641
Eco53kI	GAGCTC	1 cut(s)	2172
Eco57I	CTGAAG	7 cut(s)	843, 1028, 1887, 1938, 2130, 2141, 2171
EcoICRI	GAGCTC	1 cut(s)	2172
EcoO109I	RGGNCCY	2 cut(s)	87, 1871
EcoRI	GAATTC	3 cut(s)	349, 2140, 2552
EcoRII	CCWGG	7 cut(s)	566, 1021, 1063, 1474, 2178, 2234, 2244
EcoT14I	CCWWGG	5 cut(s)	181, 845, 2212, 2355, 2543
EcoT22I	ATGCAT	3 cut(s)	1407, 1823, 2444
EcoT38I	GRGCYC	1 cut(s)	2174
ErhI	CCWWGG	5 cut(s)	181, 845, 2212, 2355, 2543
Esp3I	CGTCTC	2 cut(s)	264, 709
FalI	AAGNNNNNCTT	2 cut(s)	350, 382
FaqI	GGGAC	3 cut(s)	73, 919, 1608
FauI	CCCGC	3 cut(s)	141, 1350, 1713
FbaI	TGATCA	1 cut(s)	1209
FblI	GTMKAC	2 cut(s)	2076, 2302
FokI	GGATG	9 cut(s)	374, 390, 636, 698, 1070, 1211, 2254, 2549, 2668
FriOI	GRGCYC	1 cut(s)	2174
FspBI	CTAG	6 cut(s)	396, 1295, 1701, 1805, 2040, 2213
GlaI	GCGC	3 cut(s)	968, 1689, 2641
GsuI	CTGGAG	1 cut(s)	2218
HaeII	RGCGCY	1 cut(s)	2643
HaeIII	GGCC	5 cut(s)	132, 1021, 1400, 1711, 1873
HapII	CCGG	9 cut(s)	91, 129, 371, 1115, 1228, 1335, 1851, 1868, 2259
HgaI	GACGC	1 cut(s)	2672
HhaI	GCGC	3 cut(s)	969, 1690, 2642
Hin1I	GRCGYC	1 cut(s)	2683
Hin6I	GCGC	3 cut(s)	967, 1688, 2640
HinP1I	GCGC	3 cut(s)	967, 1688, 2640
HincII	GTYRAC	2 cut(s)	1651, 2077
HindII	GTYRAC	2 cut(s)	1651, 2077
HindIII	AAGCTT	1 cut(s)	2627
HpaI	GTTAAC	1 cut(s)	1651
HpaII	CCGG	9 cut(s)	91, 129, 371, 1115, 1228, 1335, 1851, 1868, 2259
HphI	GGTGA	1 cut(s)	1857
Hpy166II	GTNNAC	6 cut(s)	1444, 1651, 1793, 1892, 2077, 2303
Hpy8I	GTNNAC	6 cut(s)	1444, 1651, 1793, 1892, 2077, 2303
Hpy99I	CGWCG	5 cut(s)	214, 317, 2078, 2396, 2522
HpyAV	CCTTC	8 cut(s)	88, 620, 867, 886, 1146, 1390, 2091, 2669
HpyCH4III	ACNGT	3 cut(s)	1790, 2071, 2315
HpyCH4IV	ACGT	2 cut(s)	2394, 2520
HpyF3I	CTNAG	8 cut(s)	261, 653, 1013, 1194, 1236, 1497, 1988, 2223
HpySE526I	ACGT	2 cut(s)	2394, 2520
Hsp92I	GRCGYC	1 cut(s)	2683
HspAI	GCGC	3 cut(s)	967, 1688, 2640
KflI	GGGWCCC	1 cut(s)	87
Kpn2I	TCCGGA	1 cut(s)	1114
KroI	GCCGGC	1 cut(s)	128
KroNI	GCCGGC	1 cut(s)	130
Ksp22I	TGATCA	1 cut(s)	1209
KspAI	GTTAAC	1 cut(s)	1651
KspI	CCGCGG	2 cut(s)	1566, 1709
LmnI	GCTCC	2 cut(s)	109, 1184
LweI	GCATC	7 cut(s)	412, 818, 1155, 1539, 1672, 2583, 2637
MaeI	CTAG	6 cut(s)	396, 1295, 1701, 1805, 2040, 2213
MaeII	ACGT	2 cut(s)	2394, 2520
MaeIII	GTNAC	4 cut(s)	286, 440, 693, 2395
MfeI	CAATTG	2 cut(s)	918, 2433
MflI	RGATCY	6 cut(s)	1006, 1756, 2025, 2182, 2284, 2372
MhlI	GDGCHC	2 cut(s)	2174, 2340
MlyI	GAGTC	5 cut(s)	169, 965, 1105, 1642, 2213
MmeI	TCCRAC	1 cut(s)	1501
Mph1103I	ATGCAT	3 cut(s)	1407, 1823, 2444
MroI	TCCGGA	1 cut(s)	1114
MroNI	GCCGGC	1 cut(s)	128
MroXI	GAANNNNTTC	1 cut(s)	2584
MseI	TTAA	8 cut(s)	339, 1155, 1574, 1650, 1913, 1974, 2063, 2689
MslI	CAYNNNNRTG	2 cut(s)	123, 780
MspA1I	CMGCKG	7 cut(s)	505, 1012, 1433, 1565, 1657, 1708, 1907
MspCI	CTTAAG	1 cut(s)	2062
MspI	CCGG	9 cut(s)	91, 129, 371, 1115, 1228, 1335, 1851, 1868, 2259
MunI	CAATTG	2 cut(s)	918, 2433
Mva1269I	GAATGC	2 cut(s)	1823, 2444
MvaI	CCWGG	7 cut(s)	568, 1023, 1065, 1476, 2180, 2236, 2246
MvnI	CGCG	3 cut(s)	475, 1565, 1708
NaeI	GCCGGC	1 cut(s)	130
NciI	CCSGG	5 cut(s)	91, 371, 1229, 1852, 1869
NgoMIV	GCCGGC	1 cut(s)	128
NlaIV	GGNNCC	6 cut(s)	88, 89, 1233, 1872, 2374, 2665
NmeAIII	GCCGAG	1 cut(s)	2183
NmuCI	GTSAC	2 cut(s)	440, 693
NsiI	ATGCAT	3 cut(s)	1407, 1823, 2444
NspI	RCATGY	7 cut(s)	299, 775, 855, 1409, 1825, 1957, 2446
NspV	TTCGAA	1 cut(s)	1028
OliI	CACNNNNGTG	2 cut(s)	123, 780
PaeI	GCATGC	4 cut(s)	299, 775, 855, 1409
PagI	TCATGA	1 cut(s)	1462
PciI	ACATGT	1 cut(s)	1953
PcsI	WCGNNNNNNNCGW	1 cut(s)	724
PctI	GAATGC	2 cut(s)	1823, 2444
PdiI	GCCGGC	1 cut(s)	130
PdmI	GAANNNNTTC	1 cut(s)	2584
PfeI	GAWTC	9 cut(s)	250, 665, 1176, 1361, 1379, 1426, 1730, 1898, 2580
PflMI	CCANNNNNTGG	1 cut(s)	1436
PfoI	TCCNGGA	1 cut(s)	89
PleI	GAGTC	5 cut(s)	168, 964, 1105, 1641, 2213
PpsI	GAGTC	5 cut(s)	168, 964, 1105, 1641, 2213
PpuMI	RGGWCCY	1 cut(s)	87
PscI	ACATGT	1 cut(s)	1953
PshBI	ATTAAT	1 cut(s)	1974
PsiI	TTATAA	1 cut(s)	1641
Psp124BI	GAGCTC	1 cut(s)	2174
Psp5II	RGGWCCY	1 cut(s)	87
Psp6I	CCWGG	7 cut(s)	566, 1021, 1063, 1474, 2178, 2234, 2244
PspGI	CCWGG	7 cut(s)	566, 1021, 1063, 1474, 2178, 2234, 2244
PspN4I	GGNNCC	6 cut(s)	88, 89, 1233, 1872, 2374, 2665
PspPI	GGNCC	3 cut(s)	87, 131, 1871
PspPPI	RGGWCCY	1 cut(s)	87
PstI	CTGCAG	2 cut(s)	75, 2310
PstNI	CAGNNNCTG	1 cut(s)	1193
PsuI	RGATCY	6 cut(s)	1006, 1756, 2025, 2182, 2284, 2372
PvuII	CAGCTG	3 cut(s)	1433, 1657, 1907
RsaI	GTAC	4 cut(s)	170, 982, 2068, 2266
RsaNI	GTAC	4 cut(s)	169, 981, 2067, 2265
RseI	CAYNNNNRTG	2 cut(s)	123, 780
SacI	GAGCTC	1 cut(s)	2174
SacII	CCGCGG	2 cut(s)	1566, 1709
SalI	GTCGAC	1 cut(s)	2075
SaqAI	TTAA	8 cut(s)	339, 1155, 1574, 1650, 1913, 1974, 2063, 2689
Sau96I	GGNCC	3 cut(s)	87, 131, 1871
ScaI	AGTACT	1 cut(s)	2068
SchI	GAGTC	5 cut(s)	169, 965, 1105, 1642, 2213
SduI	GDGCHC	2 cut(s)	2174, 2340
SfaNI	GCATC	7 cut(s)	412, 818, 1155, 1539, 1672, 2583, 2637
SfcI	CTRYAG	2 cut(s)	71, 2306
Sfr303I	CCGCGG	2 cut(s)	1566, 1709
SfuI	TTCGAA	1 cut(s)	1028
SgrBI	CCGCGG	2 cut(s)	1566, 1709
SinI	GGWCC	1 cut(s)	87
SmiMI	CAYNNNNRTG	2 cut(s)	123, 780
SmlI	CTYRAG	4 cut(s)	2062, 2167, 2173, 2272
SmoI	CTYRAG	4 cut(s)	2062, 2167, 2173, 2272
SpeI	ACTAGT	1 cut(s)	1294
SphI	GCATGC	4 cut(s)	299, 775, 855, 1409
SspMI	CTAG	6 cut(s)	396, 1295, 1701, 1805, 2040, 2213
SstI	GAGCTC	1 cut(s)	2174
StyI	CCWWGG	5 cut(s)	181, 845, 2212, 2355, 2543
TaaI	ACNGT	3 cut(s)	1790, 2071, 2315
TaiI	ACGT	2 cut(s)	2397, 2523
TaqI	TCGA	9 cut(s)	209, 817, 945, 1028, 1107, 1533, 2076, 2289, 2391
TaqII	GACCGA	2 cut(s)	1177, 1934
TatI	WGTACW	1 cut(s)	2066
TauI	GCSGC	5 cut(s)	151, 475, 1711, 1723, 2061
TfiI	GAWTC	9 cut(s)	250, 665, 1176, 1361, 1379, 1426, 1730, 1898, 2580
Tru1I	TTAA	8 cut(s)	339, 1155, 1574, 1650, 1913, 1974, 2063, 2689
Tru9I	TTAA	8 cut(s)	339, 1155, 1574, 1650, 1913, 1974, 2063, 2689
TscAI	CASTG	4 cut(s)	297, 351, 1003, 1740
TseFI	GTSAC	2 cut(s)	440, 693
Tsp45I	GTSAC	2 cut(s)	440, 693
TspGWI	ACGGA	5 cut(s)	457, 658, 1769, 2365, 2609
TspRI	CASTG	4 cut(s)	297, 351, 1003, 1740
Van91I	CCANNNNNTGG	1 cut(s)	1436
Vha464I	CTTAAG	1 cut(s)	2062
VpaK11BI	GGWCC	1 cut(s)	87
VspI	ATTAAT	1 cut(s)	1974
XapI	RAATTY	9 cut(s)	103, 349, 863, 1467, 1556, 1924, 2140, 2401, 2552
XceI	RCATGY	7 cut(s)	299, 775, 855, 1409, 1825, 1957, 2446
XcmI	CCANNNNNNNNNTGG	3 cut(s)	587, 1517, 2242
XmaJI	CCTAGG	1 cut(s)	2212
XmiI	GTMKAC	2 cut(s)	2076, 2302
XmnI	GAANNNNTTC	1 cut(s)	2584
XspI	CTAG	6 cut(s)	396, 1295, 1701, 1805, 2040, 2213
ZrmI	AGTACT	1 cut(s)	2068
Zsp2I	ATGCAT	3 cut(s)	1407, 1823, 2444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.