Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010080

Physical Location & Seq

Genomic Coordinates Forward (+)

46628952 .. 46634127

Gene Structure 5176 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0315000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGAGTTTGATATCGCAGAATATCCCCTCGGCTTTTAAATCCAACAAGAGCAAAAGGGAGGTTCCCGATGAGCCTGCGTTTATGCAAGCAAATGATGAGAATGGAGATGGGAAAGAAATGAGTTTGGATGTTATGAGGGTGAACAAGAGAAAGAAACAGCGCAATGAAGTTGATGAGAAAGACGCGGTGGAGCAAGAGAAGGAAATGAAGAAGCTGGAGAGCTTTTTGTTTGGAAGCATTCATGCGCCAGTGGAGTTTGGGAAGGAGGATGAGGATGAAGCGGGAGATGCAGTGGATAACGGCTCTTCTTTGTTCTTTGTGGATCGTTCTGCAAATAATGTGCTTTCTGTTGATGAAGATGATGGAGAAGTAGTATTGGAAGAGGAAACTAAGCAAAGGAAAGCTGTCTGGGAGGATGATGAAGAGGCAAAGGCCAATGTGAATATTGCCAAAGTTAACAGATTAAGGAAGCTGAGGAAGGAAGAGGATGAGAGTTTGATTTCTGGTTCTGAGTATGTTTCAAGATTGAGGGCTCAACATGTTAAGCTGAACCCAGGAACGGAGTGGGCTCAACTTGATTCAGAGCCAAGGAACAATAGATATTCTGAGGATGAATCATCAGATGATGAAGATAGGGCAGTAGTGGCCCGTGGCTACAAGGATGTTGGAGCTGTTGATGATCTCCTTCGAACAAATGAGGATCTTGTTGTGAAGAGCAGTTCAAAACTGTTGCCTGGGCTTCTTGAATATTCAGTACTGACAGATGCTAACGCAGAGGAACCTTCTAATGGTCCTATAAATTCAGTGCAGTTTCATAGAAATGCTCAGTTGCTTCTGACTGCTGGATTGGATCGAAGGCTTAGGTTTTTCCAGATTGATGGAAAACGGAATGCTAAAATTGAAAGCATATTCATTGATGACTGTCCAATTCGGAAGGCAGCCTTCTTGCCTGATGGCTCTCAGGTTATTATAGCTGGAAGGAGGAAGTTCTTTTACAGCTTTGATTTAGTGAAGGCCAAAGTTGATAGAATAGGACCCCTTGTTGGTAGAGAGGAAAAAAGCTTGGAAGTTTTTGAGGTTTCCCCTGATTCTAGTACAATTGCCTTTGTGGGCAATGAAGGATATATCTTGTTGGTTTCCTCTAAAACAAAGGAATTGATTGGGACACTGAAGATGAATGGAACTGCTCGTTCTTTAGCTTTTTCTGAAGATGGGAAGCAATTATTGAGCTCTGGCGGAGATGGACAGATTTACCACTGGGATTTGAGAACAGGAGCTTGCTTCCATAAGGCTGTTGATGAAGGTTGTATAAATGGCACTGCTCTGTGTACATCTCCAAATGGAAAACTGTTTGCTGCTGGTTCAGACAGTGGGATTGTCAATATCTACAACAGAGAGGAGTTCTTAGGGGGCAAGAGAAAACCCATCAAGACAGTCGAAAATCTCACAACCAAAGTAGATTTTCTCAAGTTCAATACTGATTCTCAAATACTGGCTATTTGTTCGAGCATGAAGAAGAACAGCTTGAAGTTGGTGCATGTTCCATCATTGACTGTGTTCTCTAACTGGCCTCCGCAAAAGAAGACCCTGCACTATCCCCGGTGTTTGGACTTCAGTCCTGGTGGAGGTTTCATGGCCATGGGAAATGCTGCTGGAAAAGTGTTGCTGTACAAGTTGCATCACTACCATGATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0001067 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009888 GO:0009889 GO:0009908 GO:0009942 GO:0010033 GO:0010051 GO:0010154 GO:0010305 GO:0010468 GO:0010556 GO:0016020 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048367 GO:0048507 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

565

Amino Acids

62.87

Weight (kDa)

5.49

Isoelectric Point (pI)

43.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	262 - 430	4e-06	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	263 - 502	7e-19	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	267 - 430	6.3e-09	WDHD1 first WD40 domain
WD40_Gbeta	PF25391	268 - 463	1.3e-06	G protein beta WD-40 repeat protein
Beta-prop_EML_2	PF23414	270 - 426	1.3e-08	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	312 - 560	1.5e-11	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	335 - 519	1.6e-10	CDC20/Fizzy WD40 domain
Beta-prop_WDR36-Utp21_1st	PF25171	348 - 429	6.9e-07	WDR36/Utp21 first beta-propeller
WDR55	PF24796	358 - 528	1.7e-08	WDR55
Beta-prop_THOC3	PF25174	359 - 546	1.3e-18	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	360 - 503	1.1e-12	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_EML_2	PF23414	441 - 560	1.8e-06	Echinoderm microtubule-associated protein second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0010080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19850 AT1G19850
fragaria_vesca	FvH4_2g38760 FvH4_2g38760 FvH4_2g38760
malus_domestica	MD08G1015500.v1.1 MD15G1014400.v1.1
prunus_persica	Prupe.1G368300_v2.0.a1
pyrus_communis	pycom08g01360 pycom15g01250
rosa_chinensis	RchiOBHm_Chr6g0302551
rosa_laevigata	RLG00000011162
rosa_multiflora	Rmu_sc0007717.1_g000001
rosa_roxburghii	Rroxscaffold_7G00165620
rosa_rugosa	Rorug06G0315000 Rorug06G0315000
rosa_samantha	Rh6AG428300 Rh6BG474400 Rh6CG440400 Rh6DG427400
rosa_wichuraiana	Rw6G037050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	185
AciI	CCGC	4 cut(s)	185, 281, 1236, 1574
AclWI	GGATC	3 cut(s)	330, 708, 858
AcoI	YGGCCR	1 cut(s)	1635
AcsI	RAATTY	1 cut(s)	799
AcuI	CTGAAG	3 cut(s)	1190, 1227, 1597
AfaI	GTAC	4 cut(s)	756, 1096, 1330, 1670
AfiI	CCNNNNNNNGG	5 cut(s)	559, 788, 1043, 1606, 1625
AflIII	ACRYGT	1 cut(s)	538
AgsI	TTSAA	6 cut(s)	522, 723, 746, 902, 1474, 1528
AjnI	CCWGG	3 cut(s)	553, 733, 1618
Alw21I	GWGCWC	1 cut(s)	1232
AlwI	GGATC	3 cut(s)	330, 708, 858
AoxI	GGCC	5 cut(s)	432, 645, 1014, 1568, 1635
ApeKI	GCWGC	3 cut(s)	938, 1355, 1649
ApoI	RAATTY	1 cut(s)	799
AspLEI	GCGC	2 cut(s)	162, 247
AspS9I	GGNCC	3 cut(s)	646, 791, 1034
AsuC2I	CCSGG	1 cut(s)	1600
AsuHPI	GGTGA	1 cut(s)	151
AsuII	TTCGAA	1 cut(s)	688
AvaII	GGWCC	2 cut(s)	791, 1034
BalI	TGGCCA	1 cut(s)	1637
BanII	GRGCYC	3 cut(s)	535, 571, 1232
BarI	GAAGNNNNNNTAC	2 cut(s)	977, 1009
BbsI	GAAGAC	1 cut(s)	1589
Bbv12I	GWGCWC	1 cut(s)	1232
BbvCI	CCTCAGC	1 cut(s)	473
BbvI	GCAGC	3 cut(s)	950, 1342, 1636
BccI	CCATC	8 cut(s)	101, 356, 872, 947, 1205, 1235, 1433, 1552
BceAI	ACGGC	1 cut(s)	316
BcgI	CGANNNNNNTGC	2 cut(s)	56, 90
BciT130I	CCWGG	3 cut(s)	555, 735, 1620
BcnI	CCSGG	1 cut(s)	1600
BfaI	CTAG	1 cut(s)	1092
BisI	GCNGC	3 cut(s)	939, 1356, 1650
BlsI	GCNGC	3 cut(s)	940, 1357, 1651
BmcAI	AGTACT	1 cut(s)	756
Bme1390I	CCNGG	4 cut(s)	555, 735, 1600, 1620
Bme18I	GGWCC	2 cut(s)	791, 1034
BmgT120I	GGNCC	3 cut(s)	646, 791, 1034
BmiI	GGNNCC	3 cut(s)	63, 780, 1036
BmrFI	CCNGG	4 cut(s)	555, 735, 1600, 1620
BmrI	ACTGGG	1 cut(s)	1267
BmsI	GCATC	4 cut(s)	277, 754, 1681, 1687
BmuI	ACTGGG	1 cut(s)	1267
BoxI	GACNNNNGTC	1 cut(s)	1614
BpiI	GAAGAC	1 cut(s)	1589
BpmI	CTGGAG	1 cut(s)	236
Bpu10I	CCTNAGC	2 cut(s)	473, 860
Bpu14I	TTCGAA	1 cut(s)	688
BpuEI	CTTGAG	1 cut(s)	1451
BpuMI	CCSGG	1 cut(s)	1600
BsaJI	CCNNGG	7 cut(s)	27, 553, 587, 649, 734, 1598, 1638
BsaXI	ACNNNNNCTCC	4 cut(s)	276, 306, 357, 387
Bsc4I	CCNNNNNNNGG	5 cut(s)	559, 788, 1043, 1606, 1625
Bse1I	ACTGG	4 cut(s)	248, 1262, 1497, 1571
Bse3DI	GCAATG	2 cut(s)	169, 1120
BseBI	CCWGG	3 cut(s)	555, 735, 1620
BseDI	CCNNGG	7 cut(s)	27, 553, 587, 649, 734, 1598, 1638
BseGI	GGATG	7 cut(s)	133, 274, 280, 421, 493, 616, 667
BseLI	CCNNNNNNNGG	5 cut(s)	559, 788, 1043, 1606, 1625
BseMI	GCAATG	2 cut(s)	169, 1120
BseMII	CTCAG	5 cut(s)	464, 501, 597, 839, 974
BseNI	ACTGG	4 cut(s)	248, 1262, 1497, 1571
BseRI	GAGGAG	1 cut(s)	1412
BseXI	GCAGC	3 cut(s)	950, 1342, 1636
BsgI	GTGCAG	2 cut(s)	827, 1574
Bsh1236I	CGCG	1 cut(s)	185
BshFI	GGCC	5 cut(s)	434, 647, 1016, 1570, 1637
BsiHKAI	GWGCWC	1 cut(s)	1232
BsiSI	CCGG	1 cut(s)	1600
BslFI	GGGAC	1 cut(s)	1177
BslI	CCNNNNNNNGG	5 cut(s)	559, 788, 1043, 1606, 1625
BsmFI	GGGAC	1 cut(s)	1177
BsmI	GAATGC	2 cut(s)	237, 895
BsnI	GGCC	5 cut(s)	434, 647, 1016, 1570, 1637
Bsp119I	TTCGAA	1 cut(s)	688
Bsp1286I	GDGCHC	3 cut(s)	535, 571, 1232
Bsp1407I	TGTACA	2 cut(s)	1328, 1668
Bsp143I	GATC	4 cut(s)	322, 679, 700, 850
Bsp19I	CCATGG	1 cut(s)	1638
BspACI	CCGC	4 cut(s)	185, 281, 1236, 1574
BspANI	GGCC	5 cut(s)	434, 647, 1016, 1570, 1637
BspCNI	CTCAG	5 cut(s)	465, 502, 598, 838, 973
BspFNI	CGCG	1 cut(s)	185
BspLI	GGNNCC	3 cut(s)	63, 780, 1036
BspPI	GGATC	3 cut(s)	330, 708, 858
BspQI	GCTCTTC	2 cut(s)	310, 707
BspT104I	TTCGAA	1 cut(s)	688
BsrDI	GCAATG	2 cut(s)	169, 1120
BsrGI	TGTACA	2 cut(s)	1328, 1668
BsrI	ACTGG	4 cut(s)	248, 1262, 1497, 1571
BssECI	CCNNGG	7 cut(s)	27, 553, 587, 649, 734, 1598, 1638
BssMI	GATC	4 cut(s)	322, 679, 700, 850
BssT1I	CCWWGG	2 cut(s)	587, 1638
Bst2UI	CCWGG	3 cut(s)	555, 735, 1620
Bst4CI	ACNGT	6 cut(s)	729, 923, 1350, 1370, 1435, 1555
Bst6I	CTCTTC	5 cut(s)	310, 375, 417, 477, 707
BstAUI	TGTACA	2 cut(s)	1328, 1668
BstBI	TTCGAA	1 cut(s)	688
BstC8I	GCNNGC	3 cut(s)	75, 87, 1279
BstDEI	CTNAG	8 cut(s)	390, 473, 510, 606, 825, 860, 960, 1405
BstDSI	CCRYGG	2 cut(s)	649, 1638
BstENI	CCTNNNNNAGG	1 cut(s)	1623
BstF5I	GGATG	7 cut(s)	133, 274, 280, 421, 493, 616, 667
BstFNI	CGCG	1 cut(s)	185
BstHHI	GCGC	2 cut(s)	162, 247
BstKTI	GATC	4 cut(s)	325, 682, 703, 853
BstMBI	GATC	4 cut(s)	322, 679, 700, 850
BstMWI	GCNNNNNNNGC	2 cut(s)	287, 644
BstNI	CCWGG	3 cut(s)	555, 735, 1620
BstNSI	RCATGY	2 cut(s)	542, 1541
BstPAI	GACNNNNGTC	1 cut(s)	1614
BstSCI	CCNGG	4 cut(s)	553, 733, 1598, 1618
BstUI	CGCG	1 cut(s)	185
BstV1I	GCAGC	3 cut(s)	950, 1342, 1636
BstV2I	GAAGAC	1 cut(s)	1589
BstX2I	RGATCY	1 cut(s)	700
BstXI	CCANNNNNNTGG	1 cut(s)	878
BstYI	RGATCY	1 cut(s)	700
BsuRI	GGCC	5 cut(s)	434, 647, 1016, 1570, 1637
BtgI	CCRYGG	2 cut(s)	649, 1638
BtsCI	GGATG	7 cut(s)	133, 274, 280, 421, 493, 616, 667
BtsI	GCAGTG	2 cut(s)	297, 1317
BtsIMutI	CAGTG	7 cut(s)	255, 297, 810, 1166, 1255, 1317, 1375
Cac8I	GCNNGC	3 cut(s)	75, 87, 1279
CfoI	GCGC	2 cut(s)	162, 247
Cfr13I	GGNCC	3 cut(s)	646, 791, 1034
CseI	GACGC	1 cut(s)	191
Csp6I	GTAC	4 cut(s)	755, 1095, 1329, 1669
CviAII	CATG	7 cut(s)	242, 539, 1510, 1538, 1633, 1639, 1688
CviQI	GTAC	4 cut(s)	755, 1095, 1329, 1669
DdeI	CTNAG	8 cut(s)	390, 473, 510, 606, 825, 860, 960, 1405
DpnI	GATC	4 cut(s)	324, 681, 702, 852
DpnII	GATC	4 cut(s)	322, 679, 700, 850
DraI	TTTAAA	1 cut(s)	37
EaeI	YGGCCR	1 cut(s)	1635
Eam1104I	CTCTTC	5 cut(s)	310, 375, 417, 477, 707
EarI	CTCTTC	5 cut(s)	310, 375, 417, 477, 707
EciI	GGCGGA	1 cut(s)	1251
Ecl136II	GAGCTC	1 cut(s)	1230
Eco130I	CCWWGG	2 cut(s)	587, 1638
Eco24I	GRGCYC	3 cut(s)	535, 571, 1232
Eco32I	GATATC	1 cut(s)	12
Eco47I	GGWCC	2 cut(s)	791, 1034
Eco53kI	GAGCTC	1 cut(s)	1230
Eco57I	CTGAAG	3 cut(s)	1190, 1227, 1597
EcoICRI	GAGCTC	1 cut(s)	1230
EcoNI	CCTNNNNNAGG	1 cut(s)	1623
EcoO109I	RGGNCCY	1 cut(s)	1034
EcoRII	CCWGG	3 cut(s)	553, 733, 1618
EcoRV	GATATC	1 cut(s)	12
EcoT14I	CCWWGG	2 cut(s)	587, 1638
EcoT22I	ATGCAT	1 cut(s)	1696
EcoT38I	GRGCYC	3 cut(s)	535, 571, 1232
ErhI	CCWWGG	2 cut(s)	587, 1638
FaeI	CATG	7 cut(s)	245, 542, 1513, 1541, 1636, 1642, 1691
FalI	AAGNNNNNCTT	4 cut(s)	926, 958, 1508, 1540
FaqI	GGGAC	1 cut(s)	1177
FatI	CATG	7 cut(s)	241, 538, 1509, 1537, 1632, 1638, 1687
FauI	CCCGC	1 cut(s)	274
Fnu4HI	GCNGC	3 cut(s)	939, 1356, 1650
FokI	GGATG	7 cut(s)	140, 281, 287, 428, 500, 623, 674
FriOI	GRGCYC	3 cut(s)	535, 571, 1232
Fsp4HI	GCNGC	3 cut(s)	939, 1356, 1650
FspBI	CTAG	1 cut(s)	1092
GlaI	GCGC	2 cut(s)	161, 246
GluI	GCNGC	3 cut(s)	939, 1356, 1650
GsuI	CTGGAG	1 cut(s)	236
HaeIII	GGCC	5 cut(s)	434, 647, 1016, 1570, 1637
HapII	CCGG	1 cut(s)	1600
HgaI	GACGC	1 cut(s)	191
HhaI	GCGC	2 cut(s)	162, 247
Hin1II	CATG	7 cut(s)	245, 542, 1513, 1541, 1636, 1642, 1691
Hin6I	GCGC	2 cut(s)	160, 245
HinP1I	GCGC	2 cut(s)	160, 245
HincII	GTYRAC	1 cut(s)	457
HindII	GTYRAC	1 cut(s)	457
HindIII	AAGCTT	1 cut(s)	1060
HinfI	GANTC	4 cut(s)	578, 614, 1088, 1481
HpaI	GTTAAC	1 cut(s)	457
HpaII	CCGG	1 cut(s)	1600
HphI	GGTGA	1 cut(s)	151
Hpy166II	GTNNAC	3 cut(s)	142, 457, 1329
Hpy188I	TCNGA	8 cut(s)	511, 583, 607, 622, 837, 933, 1207, 1366
Hpy188III	TCNNGA	5 cut(s)	65, 522, 743, 871, 1429
Hpy8I	GTNNAC	3 cut(s)	142, 457, 1329
HpyCH4III	ACNGT	6 cut(s)	729, 923, 1350, 1370, 1435, 1555
HpyCH4V	TGCA	8 cut(s)	85, 290, 332, 808, 1537, 1591, 1678, 1694
HpyF10VI	GCNNNNNNNGC	2 cut(s)	287, 644
HpyF3I	CTNAG	8 cut(s)	390, 473, 510, 606, 825, 860, 960, 1405
Hsp92II	CATG	7 cut(s)	245, 542, 1513, 1541, 1636, 1642, 1691
HspAI	GCGC	2 cut(s)	160, 245
KspAI	GTTAAC	1 cut(s)	457
Kzo9I	GATC	4 cut(s)	322, 679, 700, 850
LguI	GCTCTTC	2 cut(s)	310, 707
LmnI	GCTCC	3 cut(s)	190, 668, 1274
Lsp1109I	GCAGC	3 cut(s)	950, 1342, 1636
LweI	GCATC	4 cut(s)	277, 754, 1681, 1687
MaeI	CTAG	1 cut(s)	1092
MalI	GATC	4 cut(s)	324, 681, 702, 852
MboI	GATC	4 cut(s)	322, 679, 700, 850
MfeI	CAATTG	1 cut(s)	1098
MflI	RGATCY	1 cut(s)	700
MhlI	GDGCHC	3 cut(s)	535, 571, 1232
MlsI	TGGCCA	1 cut(s)	1637
MluCI	AATT	6 cut(s)	799, 897, 927, 1098, 1154, 1220
MluNI	TGGCCA	1 cut(s)	1637
MmeI	TCCRAC	2 cut(s)	66, 646
Mox20I	TGGCCA	1 cut(s)	1637
Mph1103I	ATGCAT	1 cut(s)	1696
MscI	TGGCCA	1 cut(s)	1637
MseI	TTAA	4 cut(s)	36, 456, 464, 543
MslI	CAYNNNNRTG	3 cut(s)	819, 1637, 1686
Msp20I	TGGCCA	1 cut(s)	1637
MspI	CCGG	1 cut(s)	1600
MspR9I	CCNGG	4 cut(s)	555, 735, 1600, 1620
MunI	CAATTG	1 cut(s)	1098
Mva1269I	GAATGC	2 cut(s)	237, 895
MvaI	CCWGG	3 cut(s)	555, 735, 1620
MvnI	CGCG	1 cut(s)	185
MwoI	GCNNNNNNNGC	2 cut(s)	287, 644
NciI	CCSGG	1 cut(s)	1600
NcoI	CCATGG	1 cut(s)	1638
NdeII	GATC	4 cut(s)	322, 679, 700, 850
NlaIII	CATG	7 cut(s)	245, 542, 1513, 1541, 1636, 1642, 1691
NlaIV	GGNNCC	3 cut(s)	63, 780, 1036
NmeAIII	GCCGAG	1 cut(s)	8
NsiI	ATGCAT	1 cut(s)	1696
NspI	RCATGY	2 cut(s)	542, 1541
NspV	TTCGAA	1 cut(s)	688
PciI	ACATGT	1 cut(s)	538
PciSI	GCTCTTC	2 cut(s)	310, 707
PctI	GAATGC	2 cut(s)	237, 895
PfeI	GAWTC	4 cut(s)	578, 614, 1088, 1481
PkrI	GCNGC	3 cut(s)	940, 1357, 1651
PpuMI	RGGWCCY	1 cut(s)	1034
PscI	ACATGT	1 cut(s)	538
PshAI	GACNNNNGTC	1 cut(s)	1614
Psp124BI	GAGCTC	1 cut(s)	1232
Psp5II	RGGWCCY	1 cut(s)	1034
Psp6I	CCWGG	3 cut(s)	553, 733, 1618
PspGI	CCWGG	3 cut(s)	553, 733, 1618
PspN4I	GGNNCC	3 cut(s)	63, 780, 1036
PspPI	GGNCC	3 cut(s)	646, 791, 1034
PspPPI	RGGWCCY	1 cut(s)	1034
PsuI	RGATCY	1 cut(s)	700
RsaI	GTAC	4 cut(s)	756, 1096, 1330, 1670
RsaNI	GTAC	4 cut(s)	755, 1095, 1329, 1669
RseI	CAYNNNNRTG	3 cut(s)	819, 1637, 1686
SacI	GAGCTC	1 cut(s)	1232
SapI	GCTCTTC	2 cut(s)	310, 707
SaqAI	TTAA	4 cut(s)	36, 456, 464, 543
SatI	GCNGC	3 cut(s)	939, 1356, 1650
Sau3AI	GATC	4 cut(s)	322, 679, 700, 850
Sau96I	GGNCC	3 cut(s)	646, 791, 1034
ScaI	AGTACT	1 cut(s)	756
ScrFI	CCNGG	4 cut(s)	555, 735, 1600, 1620
SduI	GDGCHC	3 cut(s)	535, 571, 1232
SfaNI	GCATC	4 cut(s)	277, 754, 1681, 1687
SfuI	TTCGAA	1 cut(s)	688
SinI	GGWCC	2 cut(s)	791, 1034
SmiMI	CAYNNNNRTG	3 cut(s)	819, 1637, 1686
SmlI	CTYRAG	1 cut(s)	1466
SmoI	CTYRAG	1 cut(s)	1466
Sse9I	AATT	6 cut(s)	799, 897, 927, 1098, 1154, 1220
SsiI	CCGC	4 cut(s)	185, 281, 1236, 1574
SspI	AATATT	2 cut(s)	445, 749
SspMI	CTAG	1 cut(s)	1092
SstI	GAGCTC	1 cut(s)	1232
StyD4I	CCNGG	4 cut(s)	553, 733, 1598, 1618
StyI	CCWWGG	2 cut(s)	587, 1638
TaaI	ACNGT	6 cut(s)	729, 923, 1350, 1370, 1435, 1555
TaqI	TCGA	4 cut(s)	688, 853, 1437, 1505
TasI	AATT	6 cut(s)	799, 897, 927, 1098, 1154, 1220
TatI	WGTACW	4 cut(s)	754, 1094, 1328, 1668
TfiI	GAWTC	4 cut(s)	578, 614, 1088, 1481
Tru1I	TTAA	4 cut(s)	36, 456, 464, 543
Tru9I	TTAA	4 cut(s)	36, 456, 464, 543
TscAI	CASTG	7 cut(s)	255, 297, 810, 1173, 1262, 1324, 1375
TseI	GCWGC	3 cut(s)	938, 1355, 1649
TspGWI	ACGGA	2 cut(s)	575, 901
TspRI	CASTG	7 cut(s)	255, 297, 810, 1173, 1262, 1324, 1375
VpaK11BI	GGWCC	2 cut(s)	791, 1034
XagI	CCTNNNNNAGG	1 cut(s)	1623
XapI	RAATTY	1 cut(s)	799
XceI	RCATGY	2 cut(s)	542, 1541
XcmI	CCANNNNNNNNNTGG	1 cut(s)	561
XspI	CTAG	1 cut(s)	1092
ZrmI	AGTACT	1 cut(s)	756
Zsp2I	ATGCAT	1 cut(s)	1696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.