Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0010080

Physical Location & Seq

Genomic Coordinates Reverse (-)

61988331 .. 61990914

Gene Structure 2584 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG440400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGCACATCGGTGTCCTTGCTGCTGCAGCTCATGCTGCTGCTAATCGAAGTCCATTCACTATATTCTACAATCCAAGGGCATGCCCTTCAGAATTTGTTATACCTTTGGTCAAATTCCAAAAGGCTCTATATGGGACCCAACTGTCTGTTGGCATGAGGTTTGGAATGATGTTTGAGACAGAGGAGTCTGGCAAGCGTAGATACATGGGTACAATAGTTAATATCAGTGATTTCGATCCACTGAGGTGGCCTGGTTCCAAGTGGCGAAATCTTCAGGTAGAGTGGGACGAGCCGGGGTGTTGCGATAAACAGAATAGGGTCAGCTCATGGGAAGTTGAGACTCCTGAAAGTCTTTTCATATTTCCTTCCCTGACTTCGAGTCTTAAACGTCCATTTCACTCTGGATACTTGGGTGCAGAAACTGAGTGGGCCAATATGATTAAAAGACCTTTTATCCGGGTTCCTGAGATTGGAAACATGAACTCTTTTCCTTATCCGATGTCAAATCTATGTTCAGAACAGCTAGTTAATATGCTACTAAAACCTCAAGTTAGCCAGGCTGGAACATTGTCTGCTCTACAACAGGAATCGGCTGCTAATGGAGGTGCACTAGAAGATATGCAGGCCATGCAGGCGAAAATGAACCAAAAGAATATGGTTTACTGTTCTGAAGGTATGTCTCTGCAGAGTCAAAACCCTTCCCAGTTGAACACCACAGCTAAGTTTGGAAGTCAGACACCAGTTGGAGTTAACACTGACAAAACGAAGTTAGAACCTGATCTTTCAACTGATCGGTTAAGCCAGTTGAGCTCTTCAGGACAGGGCAATGAGGAAAAATTGGCTTCTGGGATTGCTGGTAGCCCTTATAACAATGCATGCGTCAACCAGAACCAGGGCCAATTACAAGCTAGCCCACGGCCTATGCAGCAACCTATGGAATCATTACTCTACCACTCCCAACAAACTGATCTACCTCAGTCAGATTTTAATAGTGCAAATGGTTCACTTCCATCCTTAGACAATGATGAATGCATGTTCTACCAACCCTTTGCTGGGATACTGAGATCACCAGGGCCTTTGTCTGCATATGGGTTGCAGGACTGTCCATCTGTTTTAACTGAAGCAAATAATTTCTCCCCAACTTCAATGGGTCAGGAAATGTGGGATAATAGCCTCAGTAGGCTTTTACCGCAAGTTGATCAGCTCACTTCATCCCATCAAGACCCATCTACCTTTAATTCTATTCCCAACTCGGGGAGTCTGAGAGATTTGTCCGATGAGAGCAACAACCAAAGTGGGGTTTATGGTTGCCCCTCTGTTGATGTTTGTACTGGTGTGAGTAATATTGTTGCTGACCCTTCTGTTACAAGCACCATAATGGATGAGTTCTCTAAACTAAAGCATGCCGACTTCCAGAATCCTTCCGAATGTTTGGTTGGCAACTTGAGCTCGAGTCAGGATCTGCAGTCCCAGATTACGTCTGCAAGCCTAGGGGATTCTCACGCTTTCTCCAGGCAAGAACTGGCAGACAACTCAGGCGGTACATCCTCAAGCAATGTTGATCTTGATGAGAGCAGTCTACTGCAGAATAGCTGGCACCAAGTGGTCCCACCCGTGCGAACTTACACCAAGGTTCAAAAGGCGGGATCTGTTGGTAGATCAATTGATGTTACTAGTTACACAAACTATGAGGAACTATGTTCTGCAATTGAGTGCATGTTTGGACTGGAAGGGCTGCTTAACGACCCAAGAGGTTCAGGGTGGAAACTAGTTTATGTGGACTATGAGAACGATGTTCTACTTGTCGGGGATGATCCTTGGGAGGAATTTGTGGGGTGTGTGCGCTGCATCAGAATCCTTTCGCCAACAGAAGTTCAGCAGATGAGTGAAGAGGGAATGAAGCTTCTCAACAGCGCTGCTGCTTTGCAAGGGATAGGGATGAACACCACCGTGTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0001067 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009888 GO:0009889 GO:0009908 GO:0009942 GO:0010033 GO:0010051 GO:0010154 GO:0010305 GO:0010468 GO:0010556 GO:0016020 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048367 GO:0048507 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

652

Amino Acids

71.25

Weight (kDa)

4.65

Isoelectric Point (pI)

58.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARF_AD	PF06507	32 - 114	4.7e-32	Auxin response factor ancillary domain
AUX_IAA	PF02309	538 - 626	4.1e-10	AUX/IAA family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19850 AT1G19850
fragaria_vesca	FvH4_2g38760 FvH4_2g38760 FvH4_2g38760
malus_domestica	MD08G1015500.v1.1 MD15G1014400.v1.1
prunus_persica	Prupe.1G368300_v2.0.a1
pyrus_communis	pycom08g01360 pycom15g01250
rosa_chinensis	RchiOBHm_Chr6g0302551
rosa_laevigata	RLG00000011162
rosa_multiflora	Rmu_sc0007717.1_g000001
rosa_roxburghii	Rroxscaffold_7G00165620
rosa_rugosa	Rorug06G0315000 Rorug06G0315000
rosa_samantha	Rh6AG428300 Rh6BG474400 Rh6CG440400 Rh6DG427400
rosa_wichuraiana	Rw6G037050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	867
AasI	GACNNNNNNGTC	2 cut(s)	142, 184
AccB1I	GGYRCC	1 cut(s)	1596
AccI	GTMKAC	1 cut(s)	1579
AciI	CCGC	3 cut(s)	1190, 1539, 1643
AclWI	GGATC	4 cut(s)	230, 1467, 1654, 1808
AcsI	RAATTY	3 cut(s)	92, 113, 1826
AcuI	CTGAAG	5 cut(s)	72, 257, 690, 798, 1140
AdeI	CACNNNGTG	1 cut(s)	1603
AfaI	GTAC	3 cut(s)	211, 1330, 1543
AfeI	AGCGCT	1 cut(s)	1915
AfiI	CCNNNNNNNGG	7 cut(s)	470, 892, 1052, 1053, 1253, 1254, 1297
AgsI	TTSAA	4 cut(s)	709, 786, 1146, 1637
AhdI	GACNNNNNGTC	1 cut(s)	378
AhlI	ACTAGT	2 cut(s)	1673, 1768
AjnI	CCWGG	5 cut(s)	250, 555, 891, 1069, 1511
AjuI	GAANNNNNNNTTGG	2 cut(s)	1419, 1451
AleI	CACNNNNGTG	3 cut(s)	9, 244, 1949
Alw21I	GWGCWC	3 cut(s)	610, 812, 1451
Alw26I	GTCTC	3 cut(s)	170, 332, 684
Alw44I	GTGCAC	1 cut(s)	606
AlwI	GGATC	4 cut(s)	230, 1467, 1654, 1808
AlwNI	CAGNNNCTG	2 cut(s)	422, 1462
Ama87I	CYCGRG	2 cut(s)	1252, 1450
Aor51HI	AGCGCT	1 cut(s)	1915
AoxI	GGCC	6 cut(s)	248, 429, 624, 895, 917, 1073
ApaLI	GTGCAC	1 cut(s)	606
ApoI	RAATTY	3 cut(s)	92, 113, 1826
Asp700I	GAANNNNTTC	1 cut(s)	1858
AspA2I	CCTAGG	1 cut(s)	1489
AspLEI	GCGC	2 cut(s)	1845, 1916
AspS9I	GGNCC	5 cut(s)	135, 429, 895, 1073, 1606
AsuC2I	CCSGG	2 cut(s)	294, 458
AsuHPI	GGTGA	1 cut(s)	1059
AsuNHI	GCTAGC	1 cut(s)	908
AvaI	CYCGRG	2 cut(s)	1252, 1450
AvaII	GGWCC	2 cut(s)	135, 1606
AvrII	CCTAGG	1 cut(s)	1489
BaeGI	GKGCMC	1 cut(s)	610
BaeI	ACNNNNGTAYC	6 cut(s)	193, 201, 226, 234, 397, 430
BanI	GGYRCC	1 cut(s)	1596
BanII	GRGCYC	2 cut(s)	812, 1451
Bbv12I	GWGCWC	3 cut(s)	610, 812, 1451
BccI	CCATC	4 cut(s)	1018, 1114, 1224, 1234
BceAI	ACGGC	1 cut(s)	932
BciT130I	CCWGG	5 cut(s)	252, 557, 893, 1071, 1513
BciVI	GTATCC	2 cut(s)	398, 1050
BclI	TGATCA	1 cut(s)	1198
BcnI	CCSGG	2 cut(s)	294, 458
BcoDI	GTCTC	3 cut(s)	170, 332, 684
BcuI	ACTAGT	2 cut(s)	1673, 1768
BfaI	CTAG	6 cut(s)	524, 611, 909, 1490, 1674, 1769
BfmI	CTRYAG	4 cut(s)	24, 683, 1463, 1583
BfoI	RGCGCY	1 cut(s)	1917
BfuI	GTATCC	2 cut(s)	398, 1050
BglI	GCCNNNNNGGC	1 cut(s)	632
BlnI	CCTAGG	1 cut(s)	1489
Bme1390I	CCNGG	7 cut(s)	252, 294, 458, 557, 893, 1071, 1513
Bme18I	GGWCC	2 cut(s)	135, 1606
BmeRI	GACNNNNNGTC	1 cut(s)	378
BmeT110I	CYCGRG	2 cut(s)	1252, 1450
BmgT120I	GGNCC	5 cut(s)	135, 429, 895, 1073, 1606
BmiI	GGNNCC	6 cut(s)	136, 137, 256, 462, 1598, 1608
BmrFI	CCNGG	7 cut(s)	252, 294, 458, 557, 893, 1071, 1513
BmrI	ACTGGG	1 cut(s)	697
BmsI	GCATC	1 cut(s)	1857
BmtI	GCTAGC	1 cut(s)	912
BmuI	ACTGGG	1 cut(s)	697
BpmI	CTGGAG	1 cut(s)	1495
BpuEI	CTTGAG	3 cut(s)	531, 1465, 1534
BpuMI	CCSGG	2 cut(s)	294, 458
BsaBI	GATNNNNATC	1 cut(s)	234
BsaJI	CCNNGG	8 cut(s)	74, 293, 892, 914, 1070, 1489, 1629, 1817
BsaXI	ACNNNNNCTCC	2 cut(s)	1493, 1523
Bsc4I	CCNNNNNNNGG	7 cut(s)	470, 892, 1052, 1053, 1253, 1254, 1297
Bse1I	ACTGG	6 cut(s)	703, 740, 802, 1336, 1527, 1731
Bse3DI	GCAATG	2 cut(s)	832, 1561
Bse8I	GATNNNNATC	1 cut(s)	234
BseBI	CCWGG	5 cut(s)	252, 557, 893, 1071, 1513
BseDI	CCNNGG	8 cut(s)	74, 293, 892, 914, 1070, 1489, 1629, 1817
BseGI	GGATG	6 cut(s)	1010, 1211, 1387, 1544, 1816, 1944
BseJI	GATNNNNATC	1 cut(s)	234
BseLI	CCNNNNNNNGG	7 cut(s)	470, 892, 1052, 1053, 1253, 1254, 1297
BseMI	GCAATG	2 cut(s)	832, 1561
BseMII	CTCAG	8 cut(s)	233, 414, 456, 989, 1052, 1189, 1253, 1548
BseNI	ACTGG	6 cut(s)	703, 740, 802, 1336, 1527, 1731
BseRI	GAGGAG	1 cut(s)	197
BseSI	GKGCMC	1 cut(s)	610
BseYI	CCCAGC	1 cut(s)	1052
BsgI	GTGCAG	1 cut(s)	435
BshFI	GGCC	6 cut(s)	250, 431, 626, 897, 919, 1075
BshNI	GGYRCC	1 cut(s)	1596
BsiHKAI	GWGCWC	3 cut(s)	610, 812, 1451
BsiHKCI	CYCGRG	2 cut(s)	1252, 1450
BsiSI	CCGG	2 cut(s)	293, 457
BslFI	GGGAC	4 cut(s)	148, 299, 1453, 1592
BslI	CCNNNNNNNGG	7 cut(s)	470, 892, 1052, 1053, 1253, 1254, 1297
BsmAI	GTCTC	3 cut(s)	170, 332, 684
BsmFI	GGGAC	4 cut(s)	148, 299, 1453, 1592
BsmI	GAATGC	1 cut(s)	1034
BsnI	GGCC	6 cut(s)	250, 431, 626, 897, 919, 1075
BsoBI	CYCGRG	2 cut(s)	1252, 1450
Bsp1286I	GDGCHC	3 cut(s)	610, 812, 1451
BspACI	CCGC	3 cut(s)	1190, 1539, 1643
BspANI	GGCC	6 cut(s)	250, 431, 626, 897, 919, 1075
BspCNI	CTCAG	8 cut(s)	234, 415, 457, 988, 1053, 1188, 1254, 1547
BspLI	GGNNCC	6 cut(s)	136, 137, 256, 462, 1598, 1608
BspMAI	CTGCAG	4 cut(s)	28, 687, 1467, 1587
BspOI	GCTAGC	1 cut(s)	912
BspPI	GGATC	4 cut(s)	230, 1467, 1654, 1808
BspQI	GCTCTTC	1 cut(s)	817
BspT107I	GGYRCC	1 cut(s)	1596
BsrDI	GCAATG	2 cut(s)	832, 1561
BsrI	ACTGG	6 cut(s)	703, 740, 802, 1336, 1527, 1731
BssECI	CCNNGG	8 cut(s)	74, 293, 892, 914, 1070, 1489, 1629, 1817
BssT1I	CCWWGG	4 cut(s)	74, 1489, 1629, 1817
Bst2UI	CCWGG	5 cut(s)	252, 557, 893, 1071, 1513
Bst4CI	ACNGT	4 cut(s)	144, 665, 1103, 1951
Bst6I	CTCTTC	2 cut(s)	817, 1884
BstAPI	GCANNNNNTGC	2 cut(s)	32, 628
BstC8I	GCNNGC	9 cut(s)	82, 194, 624, 633, 877, 910, 1404, 1486, 1595
BstDSI	CCRYGG	1 cut(s)	914
BstF5I	GGATG	6 cut(s)	1010, 1211, 1387, 1544, 1816, 1944
BstH2I	RGCGCY	1 cut(s)	1917
BstHHI	GCGC	2 cut(s)	1845, 1916
BstMAI	GTCTC	3 cut(s)	170, 332, 684
BstMWI	GCNNNNNNNGC	9 cut(s)	26, 32, 35, 628, 632, 807, 925, 1189, 1446
BstNI	CCWGG	5 cut(s)	252, 557, 893, 1071, 1513
BstNSI	RCATGY	5 cut(s)	84, 879, 1036, 1406, 1720
BstSCI	CCNGG	7 cut(s)	250, 292, 456, 555, 891, 1069, 1511
BstSFI	CTRYAG	4 cut(s)	24, 683, 1463, 1583
BstSLI	GKGCMC	1 cut(s)	610
BstX2I	RGATCY	2 cut(s)	1459, 1646
BstXI	CCANNNNNNTGG	1 cut(s)	246
BstYI	RGATCY	2 cut(s)	1459, 1646
BsuI	GTATCC	2 cut(s)	398, 1050
BsuRI	GGCC	6 cut(s)	250, 431, 626, 897, 919, 1075
BtgI	CCRYGG	1 cut(s)	914
BtsCI	GGATG	6 cut(s)	1010, 1211, 1387, 1544, 1816, 1944
BtsIMutI	CAGTG	3 cut(s)	232, 239, 753
Cac8I	GCNNGC	9 cut(s)	82, 194, 624, 633, 877, 910, 1404, 1486, 1595
CaiI	CAGNNNCTG	2 cut(s)	422, 1462
CfoI	GCGC	2 cut(s)	1845, 1916
Cfr13I	GGNCC	5 cut(s)	135, 429, 895, 1073, 1606
CseI	GACGC	1 cut(s)	868
Csp6I	GTAC	3 cut(s)	210, 1329, 1542
CspCI	CAANNNNNGTGG	2 cut(s)	1276, 1311
CviQI	GTAC	3 cut(s)	210, 1329, 1542
DraIII	CACNNNGTG	1 cut(s)	1603
DrdI	GACNNNNNNGTC	2 cut(s)	142, 184
DriI	GACNNNNNGTC	1 cut(s)	378
DseDI	GACNNNNNNGTC	2 cut(s)	142, 184
Eam1104I	CTCTTC	2 cut(s)	817, 1884
Eam1105I	GACNNNNNGTC	1 cut(s)	378
EarI	CTCTTC	2 cut(s)	817, 1884
Ecl136II	GAGCTC	2 cut(s)	810, 1449
Eco130I	CCWWGG	4 cut(s)	74, 1489, 1629, 1817
Eco24I	GRGCYC	2 cut(s)	812, 1451
Eco47I	GGWCC	2 cut(s)	135, 1606
Eco47III	AGCGCT	1 cut(s)	1915
Eco53kI	GAGCTC	2 cut(s)	810, 1449
Eco57I	CTGAAG	5 cut(s)	72, 257, 690, 798, 1140
Eco88I	CYCGRG	2 cut(s)	1252, 1450
EcoICRI	GAGCTC	2 cut(s)	810, 1449
EcoO109I	RGGNCCY	2 cut(s)	135, 1073
EcoRII	CCWGG	5 cut(s)	250, 555, 891, 1069, 1511
EcoT14I	CCWWGG	4 cut(s)	74, 1489, 1629, 1817
EcoT22I	ATGCAT	2 cut(s)	877, 1034
EcoT38I	GRGCYC	2 cut(s)	812, 1451
ErhI	CCWWGG	4 cut(s)	74, 1489, 1629, 1817
FalI	AAGNNNNNCTT	2 cut(s)	1722, 1754
FaqI	GGGAC	4 cut(s)	148, 299, 1453, 1592
FauI	CCCGC	1 cut(s)	1636
FauNDI	CATATG	1 cut(s)	1087
FbaI	TGATCA	1 cut(s)	1198
FblI	GTMKAC	1 cut(s)	1579
FokI	GGATG	6 cut(s)	997, 1198, 1394, 1531, 1823, 1951
FriOI	GRGCYC	2 cut(s)	812, 1451
FspBI	CTAG	6 cut(s)	524, 611, 909, 1490, 1674, 1769
GlaI	GCGC	2 cut(s)	1844, 1915
GsaI	CCCAGC	1 cut(s)	1056
GsuI	CTGGAG	1 cut(s)	1495
HaeII	RGCGCY	1 cut(s)	1917
HaeIII	GGCC	6 cut(s)	250, 431, 626, 897, 919, 1075
HapII	CCGG	2 cut(s)	293, 457
HgaI	GACGC	1 cut(s)	868
HhaI	GCGC	2 cut(s)	1845, 1916
Hin6I	GCGC	2 cut(s)	1843, 1914
HinP1I	GCGC	2 cut(s)	1843, 1914
HincII	GTYRAC	2 cut(s)	751, 883
HindII	GTYRAC	2 cut(s)	751, 883
HindIII	AAGCTT	1 cut(s)	1901
HpaI	GTTAAC	1 cut(s)	751
HpaII	CCGG	2 cut(s)	293, 457
HphI	GGTGA	1 cut(s)	1059
Hpy166II	GTNNAC	7 cut(s)	608, 661, 751, 883, 1004, 1580, 1780
Hpy188III	TCNNGA	9 cut(s)	344, 402, 464, 816, 1154, 1220, 1414, 1457, 1565
Hpy8I	GTNNAC	7 cut(s)	608, 661, 751, 883, 1004, 1580, 1780
HpyAV	CCTTC	7 cut(s)	96, 375, 665, 708, 1368, 1431, 1724
HpyCH4III	ACNGT	4 cut(s)	144, 665, 1103, 1951
HpyCH4IV	ACGT	2 cut(s)	388, 1478
HpyF10VI	GCNNNNNNNGC	9 cut(s)	26, 32, 35, 628, 632, 807, 925, 1189, 1446
HpySE526I	ACGT	2 cut(s)	388, 1478
HspAI	GCGC	2 cut(s)	1843, 1914
KflI	GGGWCCC	1 cut(s)	135
Ksp22I	TGATCA	1 cut(s)	1198
KspAI	GTTAAC	1 cut(s)	751
LguI	GCTCTTC	1 cut(s)	817
LweI	GCATC	1 cut(s)	1857
MaeI	CTAG	6 cut(s)	524, 611, 909, 1490, 1674, 1769
MaeII	ACGT	2 cut(s)	388, 1478
MaeIII	GTNAC	3 cut(s)	1363, 1669, 1676
MboII	GAAGA	4 cut(s)	263, 626, 804, 1901
MfeI	CAATTG	2 cut(s)	1662, 1707
MflI	RGATCY	2 cut(s)	1459, 1646
MhlI	GDGCHC	3 cut(s)	610, 812, 1451
MluCI	AATT	9 cut(s)	92, 113, 836, 899, 1129, 1237, 1662, 1707, 1826
MlyI	GAGTC	6 cut(s)	194, 334, 388, 697, 1267, 1462
MmeI	TCCRAC	1 cut(s)	724
Mph1103I	ATGCAT	2 cut(s)	877, 1034
MroXI	GAANNNNTTC	1 cut(s)	1858
MslI	CAYNNNNRTG	4 cut(s)	9, 244, 1376, 1949
MspI	CCGG	2 cut(s)	293, 457
MspR9I	CCNGG	7 cut(s)	252, 294, 458, 557, 893, 1071, 1513
MunI	CAATTG	2 cut(s)	1662, 1707
Mva1269I	GAATGC	1 cut(s)	1034
MvaI	CCWGG	5 cut(s)	252, 557, 893, 1071, 1513
MwoI	GCNNNNNNNGC	9 cut(s)	26, 32, 35, 628, 632, 807, 925, 1189, 1446
NciI	CCSGG	2 cut(s)	294, 458
NdeI	CATATG	1 cut(s)	1087
NheI	GCTAGC	1 cut(s)	908
NlaIV	GGNNCC	6 cut(s)	136, 137, 256, 462, 1598, 1608
NsiI	ATGCAT	2 cut(s)	877, 1034
NspI	RCATGY	5 cut(s)	84, 879, 1036, 1406, 1720
OliI	CACNNNNGTG	3 cut(s)	9, 244, 1949
PaeI	GCATGC	3 cut(s)	84, 879, 1406
PaeR7I	CTCGAG	1 cut(s)	1450
PciSI	GCTCTTC	1 cut(s)	817
PctI	GAATGC	1 cut(s)	1034
PdmI	GAANNNNTTC	1 cut(s)	1858
PfeI	GAWTC	5 cut(s)	587, 938, 1417, 1496, 1854
PleI	GAGTC	6 cut(s)	193, 334, 387, 696, 1266, 1461
PpsI	GAGTC	6 cut(s)	193, 334, 387, 696, 1266, 1461
PpuMI	RGGWCCY	1 cut(s)	135
PsiI	TTATAA	1 cut(s)	867
Psp124BI	GAGCTC	2 cut(s)	812, 1451
Psp5II	RGGWCCY	1 cut(s)	135
Psp6I	CCWGG	5 cut(s)	250, 555, 891, 1069, 1511
PspFI	CCCAGC	1 cut(s)	1052
PspGI	CCWGG	5 cut(s)	250, 555, 891, 1069, 1511
PspN4I	GGNNCC	6 cut(s)	136, 137, 256, 462, 1598, 1608
PspPI	GGNCC	5 cut(s)	135, 429, 895, 1073, 1606
PspPPI	RGGWCCY	1 cut(s)	135
PspXI	VCTCGAGB	1 cut(s)	1450
PstI	CTGCAG	4 cut(s)	28, 687, 1467, 1587
PstNI	CAGNNNCTG	2 cut(s)	422, 1462
PsuI	RGATCY	2 cut(s)	1459, 1646
RsaI	GTAC	3 cut(s)	211, 1330, 1543
RsaNI	GTAC	3 cut(s)	210, 1329, 1542
RseI	CAYNNNNRTG	4 cut(s)	9, 244, 1376, 1949
SacI	GAGCTC	2 cut(s)	812, 1451
SapI	GCTCTTC	1 cut(s)	817
Sau96I	GGNCC	5 cut(s)	135, 429, 895, 1073, 1606
SchI	GAGTC	6 cut(s)	194, 334, 388, 697, 1267, 1462
ScrFI	CCNGG	7 cut(s)	252, 294, 458, 557, 893, 1071, 1513
SduI	GDGCHC	3 cut(s)	610, 812, 1451
SfaNI	GCATC	1 cut(s)	1857
SfcI	CTRYAG	4 cut(s)	24, 683, 1463, 1583
Sfr274I	CTCGAG	1 cut(s)	1450
SinI	GGWCC	2 cut(s)	135, 1606
SlaI	CTCGAG	1 cut(s)	1450
SmiMI	CAYNNNNRTG	4 cut(s)	9, 244, 1376, 1949
SmlI	CTYRAG	4 cut(s)	546, 1444, 1450, 1549
SmoI	CTYRAG	4 cut(s)	546, 1444, 1450, 1549
SpeI	ACTAGT	2 cut(s)	1673, 1768
SphI	GCATGC	3 cut(s)	84, 879, 1406
Sse9I	AATT	9 cut(s)	92, 113, 836, 899, 1129, 1237, 1662, 1707, 1826
SsiI	CCGC	3 cut(s)	1190, 1539, 1643
SspI	AATATT	1 cut(s)	1345
SspMI	CTAG	6 cut(s)	524, 611, 909, 1490, 1674, 1769
SstI	GAGCTC	2 cut(s)	812, 1451
StyD4I	CCNGG	7 cut(s)	250, 292, 456, 555, 891, 1069, 1511
StyI	CCWWGG	4 cut(s)	74, 1489, 1629, 1817
TaaI	ACNGT	4 cut(s)	144, 665, 1103, 1951
TaiI	ACGT	2 cut(s)	391, 1481
TaqI	TCGA	4 cut(s)	46, 234, 377, 1451
TasI	AATT	9 cut(s)	92, 113, 836, 899, 1129, 1237, 1662, 1707, 1826
TatI	WGTACW	1 cut(s)	1328
TfiI	GAWTC	5 cut(s)	587, 938, 1417, 1496, 1854
TscAI	CASTG	3 cut(s)	232, 246, 760
TspDTI	ATGAA	7 cut(s)	346, 494, 656, 1041, 1200, 1913, 1955
TspRI	CASTG	3 cut(s)	232, 246, 760
VneI	GTGCAC	1 cut(s)	606
VpaK11BI	GGWCC	2 cut(s)	135, 1606
XapI	RAATTY	3 cut(s)	92, 113, 1826
XceI	RCATGY	5 cut(s)	84, 879, 1036, 1406, 1720
XcmI	CCANNNNNNNNNTGG	3 cut(s)	146, 1049, 1519
XhoI	CTCGAG	1 cut(s)	1450
XmaJI	CCTAGG	1 cut(s)	1489
XmiI	GTMKAC	1 cut(s)	1579
XmnI	GAANNNNTTC	1 cut(s)	1858
XspI	CTAG	6 cut(s)	524, 611, 909, 1490, 1674, 1769
Zsp2I	ATGCAT	2 cut(s)	877, 1034

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.