Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007717.1

Orthogroup ID

OG0010080

Physical Location & Seq

Genomic Coordinates Reverse (-)

41 .. 3506

Gene Structure 3466 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007717.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

atgcaacctccaacccaagaacttgttgtccgagacttgcatgataatacctggacatttcgccacatttaccgcgattattattacatttttcttgagcatatcctatttctgtccttgcacgtaggccaaccgaagcgccaccttctcacaactggttggagtttgtttgttggcacaaagaggcttagagctggcgattctgtgctatttatcagggatgagaagtcacagctattggttggcgtaaggcgagcaaatcgtcagcagaccacattaccatcctcagttctatctgctgatagcatgcacatcggtgtccttgctgctgcagctcatgctgctgctaatcgaagtccattcactatattctacaatccaagggcatgcccttcagaatttgttattcctttggtcaaattccaaaaggctctatatgggacccaactgtctgttggcatgaggtttggaatgatgtttgagacagaggagtctggcaagcgtagatacatgggtacaatagttaatattagtgatttcgatccactgagatggcctggttccaagtggcgaaatcttcaggtagagtgggatgagccggggtgttgcgataaacagaatagggtcagctcatgggaagttgagactcctgaaagtcttttcatatttccttccctgacttcgagtcttaaacgtccatttcactctggatacttgggtgcagaaactgagtgggccaatatgattaaaagaccttttatccgggttcctgagattggaaacatgaactcttttccttatccgatgtcaaatctatgttcagaacagctagttaatatgctactaaaacctcaagttagccaggctggaacattgtctgctctacaacaggaatcggctggtaatggaggtccactagaagatatgcaggccatgcaggcgaaaatgaaccaaaagaatatggtttactgttctgaaagtatgtctctgcagagtcaaaacccttcccagttgaacaccacagctaagtttggaagtcagacaccagttggagttaacactgacaaaccgaagttagaacctgatctttcaactgatcggttaagccagttgagctcttcaggacagggcaatgaggaaaaattggcttctgggattgctggtagcccttataacaatgcatgcgtcaacccgaaccagggccaattacaagctagcccacgggctatgcagcaacctatggaatcattactctaccactcccaacaaactgatctagctcagtcagattttaatagtgcaaatggttcacttccatccttagacaatgatgaatgcatgttctaccaaccctttgctgggatactgagatcaccagggcctttgtctgcatatgggttgcaggactgtgcatctgttttaactgaagcaaataatttctccccaacttcaatgggtcaggaaatgtgggataatagcctcagtaggcttttaccgcaagttgatcagctcacttcatcccatcaagacccatctacctttaattctattcccaactcggggagtctgagagatttgtccgatgagagcaacaaccaaagtggggtttatggttgcccctctgttgatgttggtactggtgtgggtaatattgttgctgacccttctgttacaagcaccataatggatgagttctctaaactaaagcatgccgacttccagaatccttccgaatgtttggttggcaacttgagctcgagtcaggatctgcagtcccagattacgtccgcaagcctaggggattctcacgctttctccaggcaagaactggcagacaactccggtggtacatcctcaagcaatgttgatcttgatgagagcagtctactgcagaatagctggcaccaagtcgtcccacccgtgcgaacttacaccaaggttcaaaaggcgggatctgttggtagatcaattgatgttactagttacacaaactatgaggaactatgttctgcaattgagtgcatgtttggactggaagggctgcttaacgacccaagaggttcagggtggaaactagtttatgtggactatgagaacgatgttctacttgtcggggatgatccttgggaggaatttgtggggtgtgtgcgctgcatcagaatcctttctccaacggaagttcagcagatgagtgaagagggaatgaagcttctcaacagcgctgctgctttgcaagggatagggatgaacaccaccgtgtcgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0001067 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009888 GO:0009889 GO:0009908 GO:0009942 GO:0010033 GO:0010051 GO:0010154 GO:0010305 GO:0010468 GO:0010556 GO:0016020 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048367 GO:0048507 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

754

Amino Acids

83.04

Weight (kDa)

4.99

Isoelectric Point (pI)

55.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19850 AT1G19850
fragaria_vesca	FvH4_2g38760 FvH4_2g38760 FvH4_2g38760
malus_domestica	MD08G1015500.v1.1 MD15G1014400.v1.1
prunus_persica	Prupe.1G368300_v2.0.a1
pyrus_communis	pycom08g01360 pycom15g01250
rosa_chinensis	RchiOBHm_Chr6g0302551
rosa_laevigata	RLG00000011162
rosa_multiflora	Rmu_sc0007717.1_g000001
rosa_roxburghii	Rroxscaffold_7G00165620
rosa_rugosa	Rorug06G0315000 Rorug06G0315000
rosa_samantha	Rh6AG428300 Rh6BG474400 Rh6CG440400 Rh6DG427400
rosa_wichuraiana	Rw6G037050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1173
AasI	GACNNNNNNGTC	2 cut(s)	448, 490
AccB1I	GGYRCC	1 cut(s)	1902
AccI	GTMKAC	1 cut(s)	1885
AccII	CGCG	1 cut(s)	75
AciI	CCGC	4 cut(s)	73, 1496, 1788, 1949
AclWI	GGATC	4 cut(s)	536, 1773, 1960, 2114
AcsI	RAATTY	3 cut(s)	398, 419, 2132
AcuI	CTGAAG	4 cut(s)	378, 563, 1104, 1446
AfaI	GTAC	3 cut(s)	517, 1636, 1849
AfeI	AGCGCT	1 cut(s)	2221
AfiI	CCNNNNNNNGG	8 cut(s)	776, 1198, 1199, 1358, 1359, 1559, 1560, 1603
AgsI	TTSAA	4 cut(s)	1015, 1092, 1452, 1943
AhdI	GACNNNNNGTC	1 cut(s)	684
AhlI	ACTAGT	2 cut(s)	1979, 2074
AjnI	CCWGG	6 cut(s)	50, 556, 861, 1197, 1375, 1817
AjuI	GAANNNNNNNTTGG	2 cut(s)	1725, 1757
AleI	CACNNNNGTG	2 cut(s)	315, 2255
AloI	GAACNNNNNNTCC	2 cut(s)	12, 44
Alw21I	GWGCWC	2 cut(s)	1118, 1757
Alw26I	GTCTC	4 cut(s)	27, 476, 638, 990
AlwI	GGATC	4 cut(s)	536, 1773, 1960, 2114
AlwNI	CAGNNNCTG	2 cut(s)	728, 1768
Ama87I	CYCGRG	2 cut(s)	1558, 1756
Aor51HI	AGCGCT	1 cut(s)	2221
AoxI	GGCC	6 cut(s)	127, 554, 735, 930, 1201, 1379
ApoI	RAATTY	3 cut(s)	398, 419, 2132
Asp700I	GAANNNNTTC	1 cut(s)	2164
AspA2I	CCTAGG	1 cut(s)	1795
AspLEI	GCGC	3 cut(s)	141, 2151, 2222
AspS9I	GGNCC	5 cut(s)	441, 735, 911, 1201, 1379
AsuC2I	CCSGG	2 cut(s)	600, 764
AsuHPI	GGTGA	1 cut(s)	1365
AsuNHI	GCTAGC	1 cut(s)	1214
AvaI	CYCGRG	2 cut(s)	1558, 1756
AvaII	GGWCC	2 cut(s)	441, 911
AvrII	CCTAGG	1 cut(s)	1795
BaeI	ACNNNNGTAYC	8 cut(s)	499, 507, 532, 540, 703, 736, 1626, 1659
BanI	GGYRCC	1 cut(s)	1902
BanII	GRGCYC	2 cut(s)	1118, 1757
Bbv12I	GWGCWC	2 cut(s)	1118, 1757
BccI	CCATC	5 cut(s)	289, 546, 1324, 1530, 1540
BcgI	CGANNNNNNTGC	2 cut(s)	295, 329
BciT130I	CCWGG	6 cut(s)	52, 558, 863, 1199, 1377, 1819
BciVI	GTATCC	2 cut(s)	704, 1356
BclI	TGATCA	1 cut(s)	1504
BcnI	CCSGG	2 cut(s)	600, 764
BcoDI	GTCTC	4 cut(s)	27, 476, 638, 990
BcuI	ACTAGT	2 cut(s)	1979, 2074
BfaI	CTAG	7 cut(s)	830, 917, 1215, 1277, 1796, 1980, 2075
BfmI	CTRYAG	4 cut(s)	330, 989, 1769, 1889
BfoI	RGCGCY	2 cut(s)	142, 2223
BfuI	GTATCC	2 cut(s)	704, 1356
BglI	GCCNNNNNGGC	1 cut(s)	938
BlnI	CCTAGG	1 cut(s)	1795
Bme1390I	CCNGG	8 cut(s)	52, 558, 600, 764, 863, 1199, 1377, 1819
Bme18I	GGWCC	2 cut(s)	441, 911
BmeRI	GACNNNNNGTC	1 cut(s)	684
BmeT110I	CYCGRG	2 cut(s)	1558, 1756
BmgT120I	GGNCC	5 cut(s)	441, 735, 911, 1201, 1379
BmiI	GGNNCC	5 cut(s)	442, 443, 562, 768, 1904
BmrFI	CCNGG	8 cut(s)	52, 558, 600, 764, 863, 1199, 1377, 1819
BmrI	ACTGGG	1 cut(s)	1003
BmsI	GCATC	2 cut(s)	1421, 2163
BmtI	GCTAGC	1 cut(s)	1218
BmuI	ACTGGG	1 cut(s)	1003
BpmI	CTGGAG	1 cut(s)	1801
BpuEI	CTTGAG	4 cut(s)	116, 837, 1771, 1840
BpuMI	CCSGG	2 cut(s)	600, 764
BsaAI	YACGTR	1 cut(s)	124
BsaBI	GATNNNNATC	1 cut(s)	540
BsaJI	CCNNGG	8 cut(s)	380, 599, 1198, 1220, 1376, 1795, 1935, 2123
BsaWI	WCCGGW	1 cut(s)	1841
BsaXI	ACNNNNNCTCC	2 cut(s)	1799, 1829
Bsc4I	CCNNNNNNNGG	8 cut(s)	776, 1198, 1199, 1358, 1359, 1559, 1560, 1603
Bse1I	ACTGG	7 cut(s)	160, 1009, 1046, 1108, 1642, 1833, 2037
Bse3DI	GCAATG	2 cut(s)	1138, 1867
Bse8I	GATNNNNATC	1 cut(s)	540
BseBI	CCWGG	6 cut(s)	52, 558, 863, 1199, 1377, 1819
BseDI	CCNNGG	8 cut(s)	380, 599, 1198, 1220, 1376, 1795, 1935, 2123
BseGI	GGATG	9 cut(s)	226, 281, 598, 1316, 1517, 1693, 1850, 2122, 2250
BseJI	GATNNNNATC	1 cut(s)	540
BseLI	CCNNNNNNNGG	8 cut(s)	776, 1198, 1199, 1358, 1359, 1559, 1560, 1603
BseMI	GCAATG	2 cut(s)	1138, 1867
BseMII	CTCAG	8 cut(s)	300, 539, 720, 762, 1295, 1358, 1495, 1559
BseNI	ACTGG	7 cut(s)	160, 1009, 1046, 1108, 1642, 1833, 2037
BseRI	GAGGAG	1 cut(s)	503
BseYI	CCCAGC	1 cut(s)	1358
BsgI	GTGCAG	1 cut(s)	741
Bsh1236I	CGCG	1 cut(s)	75
BshFI	GGCC	6 cut(s)	129, 556, 737, 932, 1203, 1381
BshNI	GGYRCC	1 cut(s)	1902
BsiHKAI	GWGCWC	2 cut(s)	1118, 1757
BsiHKCI	CYCGRG	2 cut(s)	1558, 1756
BsiSI	CCGG	3 cut(s)	599, 763, 1842
BslFI	GGGAC	3 cut(s)	454, 1759, 1898
BslI	CCNNNNNNNGG	8 cut(s)	776, 1198, 1199, 1358, 1359, 1559, 1560, 1603
BsmAI	GTCTC	4 cut(s)	27, 476, 638, 990
BsmFI	GGGAC	3 cut(s)	454, 1759, 1898
BsmI	GAATGC	1 cut(s)	1340
BsnI	GGCC	6 cut(s)	129, 556, 737, 932, 1203, 1381
BsoBI	CYCGRG	2 cut(s)	1558, 1756
Bsp1286I	GDGCHC	2 cut(s)	1118, 1757
BspACI	CCGC	4 cut(s)	73, 1496, 1788, 1949
BspANI	GGCC	6 cut(s)	129, 556, 737, 932, 1203, 1381
BspCNI	CTCAG	8 cut(s)	299, 540, 721, 763, 1294, 1359, 1494, 1560
BspFNI	CGCG	1 cut(s)	75
BspLI	GGNNCC	5 cut(s)	442, 443, 562, 768, 1904
BspMAI	CTGCAG	4 cut(s)	334, 993, 1773, 1893
BspOI	GCTAGC	1 cut(s)	1218
BspPI	GGATC	4 cut(s)	536, 1773, 1960, 2114
BspQI	GCTCTTC	1 cut(s)	1123
BspT107I	GGYRCC	1 cut(s)	1902
BsrDI	GCAATG	2 cut(s)	1138, 1867
BsrI	ACTGG	7 cut(s)	160, 1009, 1046, 1108, 1642, 1833, 2037
BssECI	CCNNGG	8 cut(s)	380, 599, 1198, 1220, 1376, 1795, 1935, 2123
BssT1I	CCWWGG	4 cut(s)	380, 1795, 1935, 2123
Bst2UI	CCWGG	6 cut(s)	52, 558, 863, 1199, 1377, 1819
Bst4CI	ACNGT	4 cut(s)	450, 971, 1409, 2257
Bst6I	CTCTTC	2 cut(s)	1123, 2190
BstAPI	GCANNNNNTGC	2 cut(s)	338, 934
BstBAI	YACGTR	1 cut(s)	124
BstDSI	CCRYGG	1 cut(s)	1220
BstF5I	GGATG	9 cut(s)	226, 281, 598, 1316, 1517, 1693, 1850, 2122, 2250
BstFNI	CGCG	1 cut(s)	75
BstH2I	RGCGCY	2 cut(s)	142, 2223
BstHHI	GCGC	3 cut(s)	141, 2151, 2222
BstMAI	GTCTC	4 cut(s)	27, 476, 638, 990
BstMWI	GCNNNNNNNGC	8 cut(s)	332, 338, 341, 934, 938, 1113, 1495, 1752
BstNI	CCWGG	6 cut(s)	52, 558, 863, 1199, 1377, 1819
BstNSI	RCATGY	6 cut(s)	310, 390, 1185, 1342, 1712, 2026
BstSCI	CCNGG	8 cut(s)	50, 556, 598, 762, 861, 1197, 1375, 1817
BstSFI	CTRYAG	4 cut(s)	330, 989, 1769, 1889
BstUI	CGCG	1 cut(s)	75
BstX2I	RGATCY	2 cut(s)	1765, 1952
BstXI	CCANNNNNNTGG	1 cut(s)	552
BstYI	RGATCY	2 cut(s)	1765, 1952
BsuI	GTATCC	2 cut(s)	704, 1356
BsuRI	GGCC	6 cut(s)	129, 556, 737, 932, 1203, 1381
BtgI	CCRYGG	1 cut(s)	1220
BtsCI	GGATG	9 cut(s)	226, 281, 598, 1316, 1517, 1693, 1850, 2122, 2250
BtsIMutI	CAGTG	2 cut(s)	545, 1059
CaiI	CAGNNNCTG	2 cut(s)	728, 1768
CfoI	GCGC	3 cut(s)	141, 2151, 2222
Cfr13I	GGNCC	5 cut(s)	441, 735, 911, 1201, 1379
CseI	GACGC	1 cut(s)	1174
Csp6I	GTAC	3 cut(s)	516, 1635, 1848
CspCI	CAANNNNNGTGG	4 cut(s)	1582, 1617, 1825, 1860
CviQI	GTAC	3 cut(s)	516, 1635, 1848
DrdI	GACNNNNNNGTC	2 cut(s)	448, 490
DriI	GACNNNNNGTC	1 cut(s)	684
DseDI	GACNNNNNNGTC	2 cut(s)	448, 490
Eam1104I	CTCTTC	2 cut(s)	1123, 2190
Eam1105I	GACNNNNNGTC	1 cut(s)	684
EarI	CTCTTC	2 cut(s)	1123, 2190
Ecl136II	GAGCTC	2 cut(s)	1116, 1755
Eco130I	CCWWGG	4 cut(s)	380, 1795, 1935, 2123
Eco24I	GRGCYC	2 cut(s)	1118, 1757
Eco47I	GGWCC	2 cut(s)	441, 911
Eco47III	AGCGCT	1 cut(s)	2221
Eco53kI	GAGCTC	2 cut(s)	1116, 1755
Eco57I	CTGAAG	4 cut(s)	378, 563, 1104, 1446
Eco88I	CYCGRG	2 cut(s)	1558, 1756
EcoICRI	GAGCTC	2 cut(s)	1116, 1755
EcoO109I	RGGNCCY	2 cut(s)	441, 1379
EcoRII	CCWGG	6 cut(s)	50, 556, 861, 1197, 1375, 1817
EcoT14I	CCWWGG	4 cut(s)	380, 1795, 1935, 2123
EcoT22I	ATGCAT	2 cut(s)	1183, 1340
EcoT38I	GRGCYC	2 cut(s)	1118, 1757
ErhI	CCWWGG	4 cut(s)	380, 1795, 1935, 2123
FalI	AAGNNNNNCTT	2 cut(s)	2028, 2060
FaqI	GGGAC	3 cut(s)	454, 1759, 1898
FauI	CCCGC	1 cut(s)	1942
FauNDI	CATATG	1 cut(s)	1393
FbaI	TGATCA	1 cut(s)	1504
FblI	GTMKAC	1 cut(s)	1885
FokI	GGATG	9 cut(s)	233, 268, 605, 1303, 1504, 1700, 1837, 2129, 2257
FriOI	GRGCYC	2 cut(s)	1118, 1757
FspBI	CTAG	7 cut(s)	830, 917, 1215, 1277, 1796, 1980, 2075
GlaI	GCGC	3 cut(s)	140, 2150, 2221
GsaI	CCCAGC	1 cut(s)	1362
GsuI	CTGGAG	1 cut(s)	1801
HaeII	RGCGCY	2 cut(s)	142, 2223
HaeIII	GGCC	6 cut(s)	129, 556, 737, 932, 1203, 1381
HapII	CCGG	3 cut(s)	599, 763, 1842
HgaI	GACGC	1 cut(s)	1174
HhaI	GCGC	3 cut(s)	141, 2151, 2222
Hin6I	GCGC	3 cut(s)	139, 2149, 2220
HinP1I	GCGC	3 cut(s)	139, 2149, 2220
HincII	GTYRAC	2 cut(s)	1057, 1189
HindII	GTYRAC	2 cut(s)	1057, 1189
HindIII	AAGCTT	1 cut(s)	2207
HpaI	GTTAAC	1 cut(s)	1057
HpaII	CCGG	3 cut(s)	599, 763, 1842
HphI	GGTGA	1 cut(s)	1365
Hpy166II	GTNNAC	7 cut(s)	914, 967, 1057, 1189, 1310, 1886, 2086
Hpy8I	GTNNAC	7 cut(s)	914, 967, 1057, 1189, 1310, 1886, 2086
HpyAV	CCTTC	7 cut(s)	155, 402, 681, 1014, 1674, 1737, 2030
HpyCH4III	ACNGT	4 cut(s)	450, 971, 1409, 2257
HpyCH4IV	ACGT	3 cut(s)	123, 694, 1784
HpyF10VI	GCNNNNNNNGC	8 cut(s)	332, 338, 341, 934, 938, 1113, 1495, 1752
HpySE526I	ACGT	3 cut(s)	123, 694, 1784
HspAI	GCGC	3 cut(s)	139, 2149, 2220
KflI	GGGWCCC	1 cut(s)	441
Ksp22I	TGATCA	1 cut(s)	1504
KspAI	GTTAAC	1 cut(s)	1057
LguI	GCTCTTC	1 cut(s)	1123
LweI	GCATC	2 cut(s)	1421, 2163
MaeI	CTAG	7 cut(s)	830, 917, 1215, 1277, 1796, 1980, 2075
MaeII	ACGT	3 cut(s)	123, 694, 1784
MaeIII	GTNAC	4 cut(s)	228, 1669, 1975, 1982
MboII	GAAGA	4 cut(s)	569, 932, 1110, 2207
MfeI	CAATTG	2 cut(s)	1968, 2013
MflI	RGATCY	2 cut(s)	1765, 1952
MhlI	GDGCHC	2 cut(s)	1118, 1757
MluCI	AATT	9 cut(s)	398, 419, 1142, 1205, 1435, 1543, 1968, 2013, 2132
MlyI	GAGTC	6 cut(s)	500, 640, 694, 1003, 1573, 1768
MmeI	TCCRAC	4 cut(s)	35, 140, 1030, 2195
Mph1103I	ATGCAT	2 cut(s)	1183, 1340
MroXI	GAANNNNTTC	1 cut(s)	2164
MslI	CAYNNNNRTG	4 cut(s)	315, 550, 1682, 2255
MspI	CCGG	3 cut(s)	599, 763, 1842
MspR9I	CCNGG	8 cut(s)	52, 558, 600, 764, 863, 1199, 1377, 1819
MunI	CAATTG	2 cut(s)	1968, 2013
Mva1269I	GAATGC	1 cut(s)	1340
MvaI	CCWGG	6 cut(s)	52, 558, 863, 1199, 1377, 1819
MvnI	CGCG	1 cut(s)	75
MwoI	GCNNNNNNNGC	8 cut(s)	332, 338, 341, 934, 938, 1113, 1495, 1752
NciI	CCSGG	2 cut(s)	600, 764
NdeI	CATATG	1 cut(s)	1393
NheI	GCTAGC	1 cut(s)	1214
NlaIV	GGNNCC	5 cut(s)	442, 443, 562, 768, 1904
NmuCI	GTSAC	1 cut(s)	228
NsiI	ATGCAT	2 cut(s)	1183, 1340
NspI	RCATGY	6 cut(s)	310, 390, 1185, 1342, 1712, 2026
OliI	CACNNNNGTG	2 cut(s)	315, 2255
PaeI	GCATGC	4 cut(s)	310, 390, 1185, 1712
PaeR7I	CTCGAG	1 cut(s)	1756
PciSI	GCTCTTC	1 cut(s)	1123
PcsI	WCGNNNNNNNCGW	1 cut(s)	1917
PctI	GAATGC	1 cut(s)	1340
PdmI	GAANNNNTTC	1 cut(s)	2164
PfeI	GAWTC	6 cut(s)	200, 893, 1244, 1723, 1802, 2160
PleI	GAGTC	6 cut(s)	499, 640, 693, 1002, 1572, 1767
PpsI	GAGTC	6 cut(s)	499, 640, 693, 1002, 1572, 1767
Ppu21I	YACGTR	1 cut(s)	124
PpuMI	RGGWCCY	1 cut(s)	441
PsiI	TTATAA	1 cut(s)	1173
Psp124BI	GAGCTC	2 cut(s)	1118, 1757
Psp5II	RGGWCCY	1 cut(s)	441
Psp6I	CCWGG	6 cut(s)	50, 556, 861, 1197, 1375, 1817
PspFI	CCCAGC	1 cut(s)	1358
PspGI	CCWGG	6 cut(s)	50, 556, 861, 1197, 1375, 1817
PspN4I	GGNNCC	5 cut(s)	442, 443, 562, 768, 1904
PspPI	GGNCC	5 cut(s)	441, 735, 911, 1201, 1379
PspPPI	RGGWCCY	1 cut(s)	441
PspXI	VCTCGAGB	1 cut(s)	1756
PstI	CTGCAG	4 cut(s)	334, 993, 1773, 1893
PstNI	CAGNNNCTG	2 cut(s)	728, 1768
PsuI	RGATCY	2 cut(s)	1765, 1952
RsaI	GTAC	3 cut(s)	517, 1636, 1849
RsaNI	GTAC	3 cut(s)	516, 1635, 1848
RseI	CAYNNNNRTG	4 cut(s)	315, 550, 1682, 2255
SacI	GAGCTC	2 cut(s)	1118, 1757
SapI	GCTCTTC	1 cut(s)	1123
Sau96I	GGNCC	5 cut(s)	441, 735, 911, 1201, 1379
SchI	GAGTC	6 cut(s)	500, 640, 694, 1003, 1573, 1768
ScrFI	CCNGG	8 cut(s)	52, 558, 600, 764, 863, 1199, 1377, 1819
SduI	GDGCHC	2 cut(s)	1118, 1757
SfaNI	GCATC	2 cut(s)	1421, 2163
SfcI	CTRYAG	4 cut(s)	330, 989, 1769, 1889
Sfr274I	CTCGAG	1 cut(s)	1756
SinI	GGWCC	2 cut(s)	441, 911
SlaI	CTCGAG	1 cut(s)	1756
SmiMI	CAYNNNNRTG	4 cut(s)	315, 550, 1682, 2255
SmlI	CTYRAG	5 cut(s)	95, 852, 1750, 1756, 1855
SmoI	CTYRAG	5 cut(s)	95, 852, 1750, 1756, 1855
SpeI	ACTAGT	2 cut(s)	1979, 2074
SphI	GCATGC	4 cut(s)	310, 390, 1185, 1712
Sse9I	AATT	9 cut(s)	398, 419, 1142, 1205, 1435, 1543, 1968, 2013, 2132
SsiI	CCGC	4 cut(s)	73, 1496, 1788, 1949
SspI	AATATT	2 cut(s)	529, 1651
SspMI	CTAG	7 cut(s)	830, 917, 1215, 1277, 1796, 1980, 2075
SstI	GAGCTC	2 cut(s)	1118, 1757
StyD4I	CCNGG	8 cut(s)	50, 556, 598, 762, 861, 1197, 1375, 1817
StyI	CCWWGG	4 cut(s)	380, 1795, 1935, 2123
TaaI	ACNGT	4 cut(s)	450, 971, 1409, 2257
TaiI	ACGT	3 cut(s)	126, 697, 1787
TaqI	TCGA	4 cut(s)	352, 540, 683, 1757
TasI	AATT	9 cut(s)	398, 419, 1142, 1205, 1435, 1543, 1968, 2013, 2132
TfiI	GAWTC	6 cut(s)	200, 893, 1244, 1723, 1802, 2160
TscAI	CASTG	2 cut(s)	552, 1066
TseFI	GTSAC	1 cut(s)	228
Tsp45I	GTSAC	1 cut(s)	228
TspDTI	ATGAA	7 cut(s)	652, 800, 962, 1347, 1506, 2219, 2261
TspGWI	ACGGA	1 cut(s)	2189
TspRI	CASTG	2 cut(s)	552, 1066
VpaK11BI	GGWCC	2 cut(s)	441, 911
XapI	RAATTY	3 cut(s)	398, 419, 2132
XceI	RCATGY	6 cut(s)	310, 390, 1185, 1342, 1712, 2026
XcmI	CCANNNNNNNNNTGG	3 cut(s)	452, 1355, 1825
XhoI	CTCGAG	1 cut(s)	1756
XmaJI	CCTAGG	1 cut(s)	1795
XmiI	GTMKAC	1 cut(s)	1885
XmnI	GAANNNNTTC	1 cut(s)	2164
XspI	CTAG	7 cut(s)	830, 917, 1215, 1277, 1796, 1980, 2075
Zsp2I	ATGCAT	2 cut(s)	1183, 1340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.