TMV resistance protein N-like
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD11G1229200.v1.1 |
| pyrus_communis | pycom03g01340 pycom03g19240 pycom08g03640 |
| rosa_chinensis | RchiOBHm_Chr1g0341921 RchiOBHm_Chr1g0370511 RchiOBHm_Chr2g0129021 RchiOBHm_Chr4g0410851 RchiOBHm_Chr6g0307111 RchiOBHm_Chr7g0243261 |
| rosa_roxburghii | Rroxscaffold_3G00270530 |
| rosa_rugosa | Rorug05G0234700 |
| rosa_samantha | Rh5AG313300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 194 |
| AccIII | TCCGGA | 1 cut(s) | 166 |
| AcuI | CTGAAG | 1 cut(s) | 48 |
| AcyI | GRCGYC | 1 cut(s) | 191 |
| AluBI | AGCT | 2 cut(s) | 68, 133 |
| AluI | AGCT | 2 cut(s) | 68, 133 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 89 |
| Aor13HI | TCCGGA | 1 cut(s) | 166 |
| ApeKI | GCWGC | 2 cut(s) | 68, 71 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 35 |
| BbvI | GCAGC | 2 cut(s) | 55, 83 |
| BfmI | CTRYAG | 1 cut(s) | 69 |
| BisI | GCNGC | 2 cut(s) | 69, 72 |
| BlsI | GCNGC | 2 cut(s) | 70, 73 |
| BmiI | GGNNCC | 1 cut(s) | 10 |
| BsaHI | GRCGYC | 1 cut(s) | 191 |
| BsaWI | WCCGGW | 1 cut(s) | 166 |
| Bse118I | RCCGGY | 1 cut(s) | 58 |
| BseAI | TCCGGA | 1 cut(s) | 166 |
| BseGI | GGATG | 1 cut(s) | 39 |
| BseXI | GCAGC | 2 cut(s) | 55, 83 |
| BsiSI | CCGG | 2 cut(s) | 59, 167 |
| Bsp13I | TCCGGA | 1 cut(s) | 166 |
| BspEI | TCCGGA | 1 cut(s) | 166 |
| BspLI | GGNNCC | 1 cut(s) | 10 |
| BspMAI | CTGCAG | 1 cut(s) | 73 |
| BsrFI | RCCGGY | 1 cut(s) | 58 |
| BssAI | RCCGGY | 1 cut(s) | 58 |
| BssNI | GRCGYC | 1 cut(s) | 191 |
| BstACI | GRCGYC | 1 cut(s) | 191 |
| BstC8I | GCNNGC | 1 cut(s) | 60 |
| BstF5I | GGATG | 1 cut(s) | 39 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 68, 130 |
| BstSFI | CTRYAG | 1 cut(s) | 69 |
| BstV1I | GCAGC | 2 cut(s) | 55, 83 |
| BtsCI | GGATG | 1 cut(s) | 39 |
| BtsIMutI | CAGTG | 1 cut(s) | 30 |
| Cac8I | GCNNGC | 1 cut(s) | 60 |
| CaiI | CAGNNNCTG | 1 cut(s) | 89 |
| Cfr10I | RCCGGY | 1 cut(s) | 58 |
| CseI | GACGC | 1 cut(s) | 198 |
| CviJI | RGCY | 5 cut(s) | 62, 68, 86, 133, 140 |
| CviKI_1 | RGCY | 5 cut(s) | 62, 68, 86, 133, 140 |
| Eco57I | CTGAAG | 1 cut(s) | 48 |
| FaiI | YATR | 3 cut(s) | 79, 163, 217 |
| Fnu4HI | GCNGC | 2 cut(s) | 69, 72 |
| FokI | GGATG | 1 cut(s) | 26 |
| Fsp4HI | GCNGC | 2 cut(s) | 69, 72 |
| GluI | GCNGC | 2 cut(s) | 69, 72 |
| HapII | CCGG | 2 cut(s) | 59, 167 |
| HgaI | GACGC | 1 cut(s) | 198 |
| Hin1I | GRCGYC | 1 cut(s) | 191 |
| HinfI | GANTC | 1 cut(s) | 98 |
| HpaII | CCGG | 2 cut(s) | 59, 167 |
| Hpy188I | TCNGA | 2 cut(s) | 152, 196 |
| Hpy188III | TCNNGA | 2 cut(s) | 43, 167 |
| Hpy99I | CGWCG | 1 cut(s) | 193 |
| HpyCH4IV | ACGT | 1 cut(s) | 191 |
| HpyCH4V | TGCA | 1 cut(s) | 71 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 68, 130 |
| HpySE526I | ACGT | 1 cut(s) | 191 |
| Hsp92I | GRCGYC | 1 cut(s) | 191 |
| Kpn2I | TCCGGA | 1 cut(s) | 166 |
| KroI | GCCGGC | 1 cut(s) | 58 |
| KroNI | GCCGGC | 1 cut(s) | 60 |
| LpnPI | CCDG | 4 cut(s) | 56, 72, 143, 180 |
| Lsp1109I | GCAGC | 2 cut(s) | 55, 83 |
| MaeII | ACGT | 1 cut(s) | 191 |
| MboII | GAAGA | 1 cut(s) | 28 |
| MluCI | AATT | 1 cut(s) | 105 |
| MmeI | TCCRAC | 1 cut(s) | 153 |
| MnlI | CCTC | 1 cut(s) | 97 |
| MroI | TCCGGA | 1 cut(s) | 166 |
| MroNI | GCCGGC | 1 cut(s) | 58 |
| MroXI | GAANNNNTTC | 1 cut(s) | 35 |
| MspA1I | CMGCKG | 2 cut(s) | 68, 133 |
| MspI | CCGG | 2 cut(s) | 59, 167 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 68, 130 |
| NaeI | GCCGGC | 1 cut(s) | 60 |
| NgoMIV | GCCGGC | 1 cut(s) | 58 |
| NlaIV | GGNNCC | 1 cut(s) | 10 |
| PdiI | GCCGGC | 1 cut(s) | 60 |
| PdmI | GAANNNNTTC | 1 cut(s) | 35 |
| PfeI | GAWTC | 1 cut(s) | 98 |
| PkrI | GCNGC | 2 cut(s) | 70, 73 |
| PspN4I | GGNNCC | 1 cut(s) | 10 |
| PstI | CTGCAG | 1 cut(s) | 73 |
| PstNI | CAGNNNCTG | 1 cut(s) | 89 |
| PvuII | CAGCTG | 2 cut(s) | 68, 133 |
| SatI | GCNGC | 2 cut(s) | 69, 72 |
| SetI | ASST | 3 cut(s) | 70, 135, 194 |
| SfcI | CTRYAG | 1 cut(s) | 69 |
| SgeI | CNNG | 7 cut(s) | 30, 55, 71, 106, 133, 142, 179 |
| Sse9I | AATT | 1 cut(s) | 105 |
| TaiI | ACGT | 1 cut(s) | 194 |
| TaqI | TCGA | 1 cut(s) | 188 |
| TasI | AATT | 1 cut(s) | 105 |
| TfiI | GAWTC | 1 cut(s) | 98 |
| TscAI | CASTG | 1 cut(s) | 30 |
| TseI | GCWGC | 2 cut(s) | 68, 71 |
| TspDTI | ATGAA | 2 cut(s) | 28, 44 |
| TspRI | CASTG | 1 cut(s) | 30 |
| XmnI | GAANNNNTTC | 1 cut(s) | 35 |
| ZraI | GACGTC | 1 cut(s) | 192 |