RchiOBHm_Chr1g0341921

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
33821005 .. 33822926
1922 bp
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UTR
Exon/CDS
Intron
PRQ56860

Sequence Viewer

Length: 225 bp
ATGGACTTCTTAGGTTTGAAACCCAAATCTCTCAACAAATTTCTCAACCAAAGCATTTCACAAACACCATGGGACATGCCTCTGAATTCAGCTTCGGCACTTGATCTAGCAACAACTTTTTGTTTCTTGCTACGCCAGGTGACTAAATTTCCACCAACAAAAGTGAAATATCCAGAAGTGGATCTTTTATCTGATTTAGAACTAGCCCAATCTGCATCAATATAG

Protein Analysis

74

Amino Acids

8.27

Weight (kDa)

6.05

Isoelectric Point (pI)

39.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 189
AcsI RAATTY 3 cut(s) 38, 85, 146
AgsI TTSAA 1 cut(s) 19
AjnI CCWGG 1 cut(s) 135
AluBI AGCT 1 cut(s) 92
AluI AGCT 1 cut(s) 92
AlwI GGATC 1 cut(s) 189
ApoI RAATTY 3 cut(s) 38, 85, 146
AsuHPI GGTGA 1 cut(s) 151
BciT130I CCWGG 1 cut(s) 137
BfaI CTAG 2 cut(s) 107, 203
Bme1390I CCNGG 1 cut(s) 137
BmrFI CCNGG 1 cut(s) 137
BsaJI CCNNGG 1 cut(s) 68
BseBI CCWGG 1 cut(s) 137
BseDI CCNNGG 1 cut(s) 68
BslFI GGGAC 1 cut(s) 86
BsmFI GGGAC 1 cut(s) 86
Bsp143I GATC 2 cut(s) 103, 181
Bsp19I CCATGG 1 cut(s) 68
BspPI GGATC 1 cut(s) 189
BssECI CCNNGG 1 cut(s) 68
BssMI GATC 2 cut(s) 103, 181
BssT1I CCWWGG 1 cut(s) 68
Bst2UI CCWGG 1 cut(s) 137
BstDEI CTNAG 1 cut(s) 10
BstDSI CCRYGG 1 cut(s) 68
BstKTI GATC 2 cut(s) 106, 184
BstMBI GATC 2 cut(s) 103, 181
BstMWI GCNNNNNNNGC 1 cut(s) 212
BstNI CCWGG 1 cut(s) 137
BstNSI RCATGY 1 cut(s) 79
BstSCI CCNGG 1 cut(s) 135
BstX2I RGATCY 1 cut(s) 181
BstYI RGATCY 1 cut(s) 181
BtgI CCRYGG 1 cut(s) 68
CviAII CATG 2 cut(s) 69, 76
CviJI RGCY 2 cut(s) 92, 206
CviKI_1 RGCY 2 cut(s) 92, 206
DdeI CTNAG 1 cut(s) 10
DpnI GATC 2 cut(s) 105, 183
DpnII GATC 2 cut(s) 103, 181
Eco130I CCWWGG 1 cut(s) 68
EcoRI GAATTC 1 cut(s) 85
EcoRII CCWGG 1 cut(s) 135
EcoT14I CCWWGG 1 cut(s) 68
ErhI CCWWGG 1 cut(s) 68
FaeI CATG 2 cut(s) 72, 79
FaiI YATR 3 cut(s) 70, 77, 223
FalI AAGNNNNNCTT 2 cut(s) 168, 200
FaqI GGGAC 1 cut(s) 86
FatI CATG 2 cut(s) 68, 75
FspBI CTAG 2 cut(s) 107, 203
Hin1II CATG 2 cut(s) 72, 79
HphI GGTGA 1 cut(s) 151
Hpy188I TCNGA 2 cut(s) 84, 193
Hpy188III TCNNGA 1 cut(s) 173
HpyCH4V TGCA 1 cut(s) 215
HpyF10VI GCNNNNNNNGC 1 cut(s) 212
HpyF3I CTNAG 1 cut(s) 10
Hsp92II CATG 2 cut(s) 72, 79
Kzo9I GATC 2 cut(s) 103, 181
LpnPI CCDG 3 cut(s) 122, 149, 186
MaeI CTAG 2 cut(s) 107, 203
MaeIII GTNAC 1 cut(s) 139
MalI GATC 2 cut(s) 105, 183
MboI GATC 2 cut(s) 103, 181
MflI RGATCY 1 cut(s) 181
MluCI AATT 3 cut(s) 38, 85, 146
MnlI CCTC 1 cut(s) 90
MspR9I CCNGG 1 cut(s) 137
MvaI CCWGG 1 cut(s) 137
MwoI GCNNNNNNNGC 1 cut(s) 212
NcoI CCATGG 1 cut(s) 68
NdeII GATC 2 cut(s) 103, 181
NlaIII CATG 2 cut(s) 72, 79
NmuCI GTSAC 1 cut(s) 139
NspI RCATGY 1 cut(s) 79
Psp6I CCWGG 1 cut(s) 135
PspGI CCWGG 1 cut(s) 135
PsuI RGATCY 1 cut(s) 181
Sau3AI GATC 2 cut(s) 103, 181
ScrFI CCNGG 1 cut(s) 137
SetI ASST 3 cut(s) 16, 94, 141
SgeI CNNG 9 cut(s) 81, 88, 113, 119, 139, 148, 149, 185, 215
Sse9I AATT 3 cut(s) 38, 85, 146
SspMI CTAG 2 cut(s) 107, 203
StyD4I CCNGG 1 cut(s) 135
StyI CCWWGG 1 cut(s) 68
TasI AATT 3 cut(s) 38, 85, 146
TseFI GTSAC 1 cut(s) 139
Tsp45I GTSAC 1 cut(s) 139
XapI RAATTY 3 cut(s) 38, 85, 146
XceI RCATGY 1 cut(s) 79
XspI CTAG 2 cut(s) 107, 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.