RchiOBHm_Chr2g0129021

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
44612832 .. 44613531
700 bp
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UTR
Exon/CDS
Intron
PRQ50071

Sequence Viewer

Length: 201 bp
ATGGTAGGAACAACATCAAGTTCAGTGATGAACTTTTTCATCCAAACTGCTTCCTTTGCAGCCTCTGATGCTGCAATGTATTCTGCCTCAGTAGTGGAATCTGCAGTAACGCTTTGTTTGCAGCTTCTCCAATTTACTGCACCTCCATTCAAGGTGAAGACAAACCCTGATGTGGATTTTCTGTCATTCACATCAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

66

Amino Acids

7.03

Weight (kDa)

4.2

Isoelectric Point (pI)

25.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 172
AgsI TTSAA 1 cut(s) 151
AluBI AGCT 1 cut(s) 124
AluI AGCT 1 cut(s) 124
AlwNI CAGNNNCTG 1 cut(s) 65
ApeKI GCWGC 3 cut(s) 59, 71, 121
Asp700I GAANNNNTTC 1 cut(s) 35
AsuHPI GGTGA 1 cut(s) 166
BbsI GAAGAC 1 cut(s) 164
BbvI GCAGC 3 cut(s) 58, 71, 133
BfmI CTRYAG 1 cut(s) 102
BisI GCNGC 3 cut(s) 60, 72, 122
BlsI GCNGC 3 cut(s) 61, 73, 123
BmsI GCATC 1 cut(s) 58
BpiI GAAGAC 1 cut(s) 164
BsaXI ACNNNNNCTCC 2 cut(s) 127, 157
Bsc4I CCNNNNNNNGG 1 cut(s) 172
Bse3DI GCAATG 1 cut(s) 81
BseGI GGATG 1 cut(s) 39
BseLI CCNNNNNNNGG 1 cut(s) 172
BseMI GCAATG 1 cut(s) 81
BseMII CTCAG 1 cut(s) 102
BseXI GCAGC 3 cut(s) 58, 71, 133
BsgI GTGCAG 1 cut(s) 123
BslI CCNNNNNNNGG 1 cut(s) 172
BspCNI CTCAG 1 cut(s) 101
BspMAI CTGCAG 1 cut(s) 106
BsrDI GCAATG 1 cut(s) 81
BstDEI CTNAG 1 cut(s) 88
BstF5I GGATG 1 cut(s) 39
BstMWI GCNNNNNNNGC 3 cut(s) 56, 68, 118
BstSFI CTRYAG 1 cut(s) 102
BstV1I GCAGC 3 cut(s) 58, 71, 133
BstV2I GAAGAC 1 cut(s) 164
BtsCI GGATG 1 cut(s) 39
BtsIMutI CAGTG 1 cut(s) 30
CaiI CAGNNNCTG 1 cut(s) 65
CviJI RGCY 2 cut(s) 62, 124
CviKI_1 RGCY 2 cut(s) 62, 124
DdeI CTNAG 1 cut(s) 88
Fnu4HI GCNGC 3 cut(s) 60, 72, 122
FokI GGATG 1 cut(s) 26
Fsp4HI GCNGC 3 cut(s) 60, 72, 122
GluI GCNGC 3 cut(s) 60, 72, 122
HinfI GANTC 1 cut(s) 98
HphI GGTGA 1 cut(s) 166
Hpy188I TCNGA 2 cut(s) 67, 196
HpyCH4V TGCA 5 cut(s) 59, 74, 104, 121, 140
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 68, 118
HpyF3I CTNAG 1 cut(s) 88
LpnPI CCDG 1 cut(s) 180
Lsp1109I GCAGC 3 cut(s) 58, 71, 133
LweI GCATC 1 cut(s) 58
MaeIII GTNAC 1 cut(s) 106
MboII GAAGA 1 cut(s) 169
MluCI AATT 1 cut(s) 131
MnlI CCTC 3 cut(s) 73, 97, 153
MroXI GAANNNNTTC 1 cut(s) 35
MwoI GCNNNNNNNGC 3 cut(s) 56, 68, 118
PdmI GAANNNNTTC 1 cut(s) 35
PfeI GAWTC 1 cut(s) 98
PkrI GCNGC 3 cut(s) 61, 73, 123
PstI CTGCAG 1 cut(s) 106
PstNI CAGNNNCTG 1 cut(s) 65
SatI GCNGC 3 cut(s) 60, 72, 122
SetI ASST 3 cut(s) 126, 145, 156
SfaNI GCATC 1 cut(s) 58
SfcI CTRYAG 1 cut(s) 102
SgeI CNNG 3 cut(s) 30, 163, 179
Sse9I AATT 1 cut(s) 131
TasI AATT 1 cut(s) 131
TfiI GAWTC 1 cut(s) 98
TscAI CASTG 1 cut(s) 30
TseI GCWGC 3 cut(s) 59, 71, 121
TspDTI ATGAA 2 cut(s) 28, 44
TspRI CASTG 1 cut(s) 30
XmnI GAANNNNTTC 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.