Electron transfer DM13
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G54830 |
| malus_domestica | MD08G1058600.v1.1 MD15G1037900.v1.1 |
| prunus_persica | Prupe.1G391800_v2.0.a1 |
| pyrus_communis | pycom08g04850 pycom15g03510 |
| rosa_chinensis | RchiOBHm_Chr6g0299641 |
| rosa_laevigata | RLG00000011400 |
| rosa_multiflora | Rmu_co8233929.1_g000001 Rmu_co8458799.1_g000001 Rmu_sc0002895.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00168480 |
| rosa_rugosa | Rorug06G0291300 |
| rosa_samantha | Rh6BG410500 Rh6CG416200 Rh6DG403400 |
| rosa_wichuraiana | Rw6G035190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1963 |
| AatII | GACGTC | 1 cut(s) | 714 |
| Acc36I | ACCTGC | 1 cut(s) | 1963 |
| Acc65I | GGTACC | 1 cut(s) | 1398 |
| AccB1I | GGYRCC | 3 cut(s) | 1398, 1738, 1900 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1805, 2801 |
| AccBSI | CCGCTC | 2 cut(s) | 1630, 2100 |
| AccI | GTMKAC | 4 cut(s) | 1929, 2224, 2758, 3295 |
| AccII | CGCG | 4 cut(s) | 642, 1199, 1778, 3224 |
| AccIII | TCCGGA | 1 cut(s) | 472 |
| AcsI | RAATTY | 5 cut(s) | 197, 614, 1156, 1825, 2242 |
| AcuI | CTGAAG | 3 cut(s) | 1098, 1454, 1878 |
| AcyI | GRCGYC | 1 cut(s) | 711 |
| AdeI | CACNNNGTG | 1 cut(s) | 1805 |
| AfeI | AGCGCT | 1 cut(s) | 237 |
| AflIII | ACRYGT | 2 cut(s) | 2596, 2719 |
| AjiI | CACGTC | 1 cut(s) | 261 |
| AjnI | CCWGG | 4 cut(s) | 63, 540, 839, 2563 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1421, 1453, 1547, 1579, 3037, 3069 |
| AleI | CACNNNNGTG | 1 cut(s) | 381 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2129, 2161 |
| Alw21I | GWGCWC | 3 cut(s) | 388, 1173, 1265 |
| Alw26I | GTCTC | 5 cut(s) | 277, 685, 775, 785, 1829 |
| Alw44I | GTGCAC | 2 cut(s) | 384, 1261 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1603 |
| Ama87I | CYCGRG | 1 cut(s) | 908 |
| Aor13HI | TCCGGA | 1 cut(s) | 472 |
| Aor51HI | AGCGCT | 1 cut(s) | 237 |
| ApaLI | GTGCAC | 2 cut(s) | 384, 1261 |
| ApeKI | GCWGC | 4 cut(s) | 2467, 2738, 2885, 3243 |
| ApoI | RAATTY | 5 cut(s) | 197, 614, 1156, 1825, 2242 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 970, 2937 |
| Asp718I | GGTACC | 1 cut(s) | 1398 |
| AspLEI | GCGC | 4 cut(s) | 238, 822, 2867, 3226 |
| AsuC2I | CCSGG | 4 cut(s) | 213, 702, 1117, 1919 |
| AvaI | CYCGRG | 1 cut(s) | 908 |
| AvaII | GGWCC | 6 cut(s) | 871, 1119, 1320, 1502, 1568, 1921 |
| AxyI | CCTNAGG | 1 cut(s) | 512 |
| BaeGI | GKGCMC | 5 cut(s) | 388, 900, 1265, 1743, 1903 |
| BamHI | GGATCC | 1 cut(s) | 433 |
| BanI | GGYRCC | 3 cut(s) | 1398, 1738, 1900 |
| BanII | GRGCYC | 3 cut(s) | 212, 1173, 3104 |
| Bbv12I | GWGCWC | 3 cut(s) | 388, 1173, 1265 |
| BbvI | GCAGC | 4 cut(s) | 2454, 2725, 2897, 3230 |
| BccI | CCATC | 8 cut(s) | 397, 460, 1056, 1208, 2198, 2603, 2728, 2971 |
| BceAI | ACGGC | 9 cut(s) | 366, 382, 848, 940, 1178, 1294, 1367, 1393, 1459 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 243, 277 |
| BciT130I | CCWGG | 4 cut(s) | 65, 542, 841, 2565 |
| BclI | TGATCA | 2 cut(s) | 2026, 3228 |
| BcnI | CCSGG | 4 cut(s) | 213, 702, 1117, 1919 |
| BcoDI | GTCTC | 5 cut(s) | 277, 685, 775, 785, 1829 |
| BfaI | CTAG | 1 cut(s) | 2583 |
| BfmI | CTRYAG | 1 cut(s) | 2484 |
| BfoI | RGCGCY | 1 cut(s) | 239 |
| BfuAI | ACCTGC | 1 cut(s) | 1963 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1452 |
| BisI | GCNGC | 8 cut(s) | 726, 729, 1110, 2468, 2739, 2886, 3244, 3391 |
| BlpI | GCTNAGC | 1 cut(s) | 2688 |
| BlsI | GCNGC | 8 cut(s) | 727, 730, 1111, 2469, 2740, 2887, 3245, 3392 |
| BmcAI | AGTACT | 2 cut(s) | 2642, 2840 |
| Bme1390I | CCNGG | 8 cut(s) | 65, 213, 542, 702, 841, 1117, 1919, 2565 |
| Bme18I | GGWCC | 6 cut(s) | 871, 1119, 1320, 1502, 1568, 1921 |
| BmeT110I | CYCGRG | 1 cut(s) | 908 |
| BmgBI | CACGTC | 1 cut(s) | 261 |
| BmrFI | CCNGG | 8 cut(s) | 65, 213, 542, 702, 841, 1117, 1919, 2565 |
| BmsI | GCATC | 9 cut(s) | 382, 1369, 1567, 1606, 1609, 2203, 2286, 2852, 3274 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1986 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2801, 2833 |
| BpmI | CTGGAG | 1 cut(s) | 611 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2693 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2688 |
| BpuEI | CTTGAG | 2 cut(s) | 1848, 3092 |
| BpuMI | CCSGG | 4 cut(s) | 213, 702, 1117, 1919 |
| Bsa29I | ATCGAT | 3 cut(s) | 647, 660, 1092 |
| BsaAI | YACGTR | 2 cut(s) | 901, 2779 |
| BsaBI | GATNNNNATC | 6 cut(s) | 166, 432, 474, 1599, 1784, 2412 |
| BsaHI | GRCGYC | 1 cut(s) | 711 |
| BsaI | GGTCTC | 2 cut(s) | 277, 685 |
| BsaJI | CCNNGG | 9 cut(s) | 63, 211, 640, 700, 840, 1495, 1620, 1917, 3278 |
| BsaWI | WCCGGW | 4 cut(s) | 472, 562, 1903, 2335 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1173, 1203, 2796, 2826 |
| Bse118I | RCCGGY | 3 cut(s) | 731, 758, 2509 |
| Bse1I | ACTGG | 2 cut(s) | 423, 722 |
| Bse21I | CCTNAGG | 1 cut(s) | 512 |
| Bse3DI | GCAATG | 1 cut(s) | 2394 |
| Bse8I | GATNNNNATC | 6 cut(s) | 166, 432, 474, 1599, 1784, 2412 |
| BseAI | TCCGGA | 1 cut(s) | 472 |
| BseBI | CCWGG | 4 cut(s) | 65, 542, 841, 2565 |
| BseCI | ATCGAT | 3 cut(s) | 647, 660, 1092 |
| BseDI | CCNNGG | 9 cut(s) | 63, 211, 640, 700, 840, 1495, 1620, 1917, 3278 |
| BseGI | GGATG | 9 cut(s) | 1219, 1384, 2029, 2218, 2227, 2658, 2739, 3254, 3289 |
| BseJI | GATNNNNATC | 6 cut(s) | 166, 432, 474, 1599, 1784, 2412 |
| BseMI | GCAATG | 1 cut(s) | 2394 |
| BseMII | CTCAG | 7 cut(s) | 209, 999, 2229, 2658, 2679, 3132, 3330 |
| BseNI | ACTGG | 2 cut(s) | 423, 722 |
| BseRI | GAGGAG | 6 cut(s) | 265, 521, 524, 527, 1387, 2822 |
| BseSI | GKGCMC | 5 cut(s) | 388, 900, 1265, 1743, 1903 |
| BseXI | GCAGC | 4 cut(s) | 2454, 2725, 2897, 3230 |
| BseYI | CCCAGC | 2 cut(s) | 1648, 3061 |
| BsgI | GTGCAG | 1 cut(s) | 1991 |
| Bsh1236I | CGCG | 4 cut(s) | 642, 1199, 1778, 3224 |
| BshNI | GGYRCC | 3 cut(s) | 1398, 1738, 1900 |
| BshVI | ATCGAT | 3 cut(s) | 647, 660, 1092 |
| BsiHKAI | GWGCWC | 3 cut(s) | 388, 1173, 1265 |
| BsiHKCI | CYCGRG | 1 cut(s) | 908 |
| BslFI | GGGAC | 2 cut(s) | 884, 1132 |
| BsmAI | GTCTC | 5 cut(s) | 277, 685, 775, 785, 1829 |
| BsmBI | CGTCTC | 2 cut(s) | 775, 785 |
| BsmFI | GGGAC | 2 cut(s) | 884, 1132 |
| BsmI | GAATGC | 3 cut(s) | 1816, 2776, 3250 |
| Bso31I | GGTCTC | 2 cut(s) | 277, 685 |
| BsoBI | CYCGRG | 1 cut(s) | 908 |
| Bsp1286I | GDGCHC | 8 cut(s) | 212, 388, 900, 1173, 1265, 1743, 1903, 3104 |
| Bsp13I | TCCGGA | 1 cut(s) | 472 |
| Bsp1407I | TGTACA | 4 cut(s) | 1269, 1692, 1782, 2521 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2688 |
| Bsp19I | CCATGG | 2 cut(s) | 1495, 3278 |
| Bsp68I | TCGCGA | 1 cut(s) | 1778 |
| BspCNI | CTCAG | 7 cut(s) | 210, 1000, 2230, 2657, 2680, 3131, 3329 |
| BspDI | ATCGAT | 3 cut(s) | 647, 660, 1092 |
| BspEI | TCCGGA | 1 cut(s) | 472 |
| BspFNI | CGCG | 4 cut(s) | 642, 1199, 1778, 3224 |
| BspMAI | CTGCAG | 1 cut(s) | 2488 |
| BspMI | ACCTGC | 1 cut(s) | 1963 |
| BspQI | GCTCTTC | 1 cut(s) | 2090 |
| BspT107I | GGYRCC | 3 cut(s) | 1398, 1738, 1900 |
| BspTNI | GGTCTC | 2 cut(s) | 277, 685 |
| BsrBI | CCGCTC | 2 cut(s) | 1630, 2100 |
| BsrDI | GCAATG | 1 cut(s) | 2394 |
| BsrFI | RCCGGY | 3 cut(s) | 731, 758, 2509 |
| BsrGI | TGTACA | 4 cut(s) | 1269, 1692, 1782, 2521 |
| BsrI | ACTGG | 2 cut(s) | 423, 722 |
| BssAI | RCCGGY | 3 cut(s) | 731, 758, 2509 |
| BssECI | CCNNGG | 9 cut(s) | 63, 211, 640, 700, 840, 1495, 1620, 1917, 3278 |
| BssNAI | GTATAC | 4 cut(s) | 1930, 2225, 2759, 3296 |
| BssNI | GRCGYC | 1 cut(s) | 711 |
| BssT1I | CCWWGG | 3 cut(s) | 1495, 1620, 3278 |
| Bst1107I | GTATAC | 4 cut(s) | 1930, 2225, 2759, 3296 |
| Bst2UI | CCWGG | 4 cut(s) | 65, 542, 841, 2565 |
| Bst4CI | ACNGT | 6 cut(s) | 383, 1256, 2012, 2313, 2577, 3011 |
| Bst6I | CTCTTC | 4 cut(s) | 283, 1074, 1502, 2090 |
| BstACI | GRCGYC | 1 cut(s) | 711 |
| BstAUI | TGTACA | 4 cut(s) | 1269, 1692, 1782, 2521 |
| BstBAI | YACGTR | 2 cut(s) | 901, 2779 |
| BstC8I | GCNNGC | 6 cut(s) | 256, 371, 733, 760, 1444, 3248 |
| BstDSI | CCRYGG | 3 cut(s) | 640, 1495, 3278 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2821 |
| BstF5I | GGATG | 9 cut(s) | 1219, 1384, 2029, 2218, 2227, 2658, 2739, 3254, 3289 |
| BstFNI | CGCG | 4 cut(s) | 642, 1199, 1778, 3224 |
| BstH2I | RGCGCY | 1 cut(s) | 239 |
| BstHHI | GCGC | 4 cut(s) | 238, 822, 2867, 3226 |
| BstMAI | GTCTC | 5 cut(s) | 277, 685, 775, 785, 1829 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1018, 1190, 1452, 2473 |
| BstNI | CCWGG | 4 cut(s) | 65, 542, 841, 2565 |
| BstNSI | RCATGY | 4 cut(s) | 697, 2434, 2600, 2723 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1986 |
| BstSCI | CCNGG | 8 cut(s) | 63, 211, 540, 700, 839, 1115, 1917, 2563 |
| BstSFI | CTRYAG | 1 cut(s) | 2484 |
| BstSLI | GKGCMC | 5 cut(s) | 388, 900, 1265, 1743, 1903 |
| BstSNI | TACGTA | 1 cut(s) | 2779 |
| BstUI | CGCG | 4 cut(s) | 642, 1199, 1778, 3224 |
| BstV1I | GCAGC | 4 cut(s) | 2454, 2725, 2897, 3230 |
| BstX2I | RGATCY | 6 cut(s) | 433, 459, 469, 475, 849, 1666 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1496, 1885 |
| BstYI | RGATCY | 6 cut(s) | 433, 459, 469, 475, 849, 1666 |
| BstZ17I | GTATAC | 4 cut(s) | 1930, 2225, 2759, 3296 |
| Bsu15I | ATCGAT | 3 cut(s) | 647, 660, 1092 |
| Bsu36I | CCTNAGG | 1 cut(s) | 512 |
| BsuTUI | ATCGAT | 3 cut(s) | 647, 660, 1092 |
| BtgI | CCRYGG | 3 cut(s) | 640, 1495, 3278 |
| BtgZI | GCGATG | 1 cut(s) | 1793 |
| BtrI | CACGTC | 1 cut(s) | 261 |
| BtsCI | GGATG | 9 cut(s) | 1219, 1384, 2029, 2218, 2227, 2658, 2739, 3254, 3289 |
| BtsIMutI | CAGTG | 6 cut(s) | 430, 715, 1261, 2017, 2902, 3324 |
| BtuMI | TCGCGA | 1 cut(s) | 1778 |
| BveI | ACCTGC | 1 cut(s) | 1963 |
| Cac8I | GCNNGC | 6 cut(s) | 256, 371, 733, 760, 1444, 3248 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1603 |
| CfoI | GCGC | 4 cut(s) | 238, 822, 2867, 3226 |
| Cfr10I | RCCGGY | 3 cut(s) | 731, 758, 2509 |
| Cfr42I | CCGCGG | 1 cut(s) | 643 |
| ClaI | ATCGAT | 3 cut(s) | 647, 660, 1092 |
| CseI | GACGC | 1 cut(s) | 2936 |
| DraIII | CACNNNGTG | 1 cut(s) | 1805 |
| Eam1104I | CTCTTC | 4 cut(s) | 283, 1074, 1502, 2090 |
| EarI | CTCTTC | 4 cut(s) | 283, 1074, 1502, 2090 |
| EciI | GGCGGA | 2 cut(s) | 368, 1659 |
| Ecl136II | GAGCTC | 1 cut(s) | 1171 |
| Eco105I | TACGTA | 1 cut(s) | 2779 |
| Eco130I | CCWWGG | 3 cut(s) | 1495, 1620, 3278 |
| Eco147I | AGGCCT | 2 cut(s) | 2455, 3214 |
| Eco24I | GRGCYC | 3 cut(s) | 212, 1173, 3104 |
| Eco31I | GGTCTC | 2 cut(s) | 277, 685 |
| Eco47I | GGWCC | 6 cut(s) | 871, 1119, 1320, 1502, 1568, 1921 |
| Eco47III | AGCGCT | 1 cut(s) | 237 |
| Eco53kI | GAGCTC | 1 cut(s) | 1171 |
| Eco57I | CTGAAG | 3 cut(s) | 1098, 1454, 1878 |
| Eco81I | CCTNAGG | 1 cut(s) | 512 |
| Eco88I | CYCGRG | 1 cut(s) | 908 |
| EcoICRI | GAGCTC | 1 cut(s) | 1171 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2821 |
| EcoO109I | RGGNCCY | 4 cut(s) | 871, 1568, 1624, 1853 |
| EcoRI | GAATTC | 3 cut(s) | 614, 1156, 1825 |
| EcoRII | CCWGG | 4 cut(s) | 63, 540, 839, 2563 |
| EcoT14I | CCWWGG | 3 cut(s) | 1495, 1620, 3278 |
| EcoT22I | ATGCAT | 2 cut(s) | 2436, 2776 |
| EcoT38I | GRGCYC | 3 cut(s) | 212, 1173, 3104 |
| ErhI | CCWWGG | 3 cut(s) | 1495, 1620, 3278 |
| Esp3I | CGTCTC | 2 cut(s) | 775, 785 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2200, 2232 |
| FaqI | GGGAC | 2 cut(s) | 884, 1132 |
| FauI | CCCGC | 4 cut(s) | 1192, 1435, 1635, 2175 |
| FauNDI | CATATG | 1 cut(s) | 3198 |
| FbaI | TGATCA | 2 cut(s) | 2026, 3228 |
| FblI | GTMKAC | 4 cut(s) | 1929, 2224, 2758, 3295 |
| Fnu4HI | GCNGC | 8 cut(s) | 726, 729, 1110, 2468, 2739, 2886, 3244, 3391 |
| FokI | GGATG | 9 cut(s) | 1226, 1391, 2036, 2214, 2225, 2645, 2746, 3241, 3296 |
| FriOI | GRGCYC | 3 cut(s) | 212, 1173, 3104 |
| Fsp4HI | GCNGC | 8 cut(s) | 726, 729, 1110, 2468, 2739, 2886, 3244, 3391 |
| FspBI | CTAG | 1 cut(s) | 2583 |
| GlaI | GCGC | 4 cut(s) | 237, 821, 2866, 3225 |
| GluI | GCNGC | 8 cut(s) | 726, 729, 1110, 2468, 2739, 2886, 3244, 3391 |
| GsaI | CCCAGC | 2 cut(s) | 1652, 3065 |
| GsuI | CTGGAG | 1 cut(s) | 611 |
| HaeII | RGCGCY | 1 cut(s) | 239 |
| HgaI | GACGC | 1 cut(s) | 2936 |
| HhaI | GCGC | 4 cut(s) | 238, 822, 2867, 3226 |
| Hin1I | GRCGYC | 1 cut(s) | 711 |
| Hin6I | GCGC | 4 cut(s) | 236, 820, 2865, 3224 |
| HinP1I | GCGC | 4 cut(s) | 236, 820, 2865, 3224 |
| HincII | GTYRAC | 2 cut(s) | 601, 1981 |
| HindII | GTYRAC | 2 cut(s) | 601, 1981 |
| HindIII | AAGCTT | 1 cut(s) | 2621 |
| Hpy188III | TCNNGA | 7 cut(s) | 473, 1664, 1777, 2974, 3002, 3141, 3258 |
| Hpy99I | CGWCG | 7 cut(s) | 265, 368, 713, 770, 955, 961, 1199 |
| HpyCH4III | ACNGT | 6 cut(s) | 383, 1256, 2012, 2313, 2577, 3011 |
| HpyCH4IV | ACGT | 8 cut(s) | 226, 260, 711, 794, 900, 1067, 2778, 3305 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1018, 1190, 1452, 2473 |
| HpySE526I | ACGT | 8 cut(s) | 226, 260, 711, 794, 900, 1067, 2778, 3305 |
| Hsp92I | GRCGYC | 1 cut(s) | 711 |
| HspAI | GCGC | 4 cut(s) | 236, 820, 2865, 3224 |
| Kpn2I | TCCGGA | 1 cut(s) | 472 |
| KpnI | GGTACC | 1 cut(s) | 1402 |
| KroI | GCCGGC | 2 cut(s) | 731, 758 |
| KroNI | GCCGGC | 2 cut(s) | 733, 760 |
| Ksp22I | TGATCA | 2 cut(s) | 2026, 3228 |
| KspI | CCGCGG | 1 cut(s) | 643 |
| LguI | GCTCTTC | 1 cut(s) | 2090 |
| LmnI | GCTCC | 9 cut(s) | 355, 630, 642, 674, 702, 710, 946, 1181, 1717 |
| Lsp1109I | GCAGC | 4 cut(s) | 2454, 2725, 2897, 3230 |
| LweI | GCATC | 9 cut(s) | 382, 1369, 1567, 1606, 1609, 2203, 2286, 2852, 3274 |
| MaeI | CTAG | 1 cut(s) | 2583 |
| MaeII | ACGT | 8 cut(s) | 226, 260, 711, 794, 900, 1067, 2778, 3305 |
| MaeIII | GTNAC | 6 cut(s) | 289, 835, 1636, 1653, 2035, 2440 |
| MbiI | CCGCTC | 2 cut(s) | 1630, 2100 |
| MfeI | CAATTG | 1 cut(s) | 3052 |
| MflI | RGATCY | 6 cut(s) | 433, 459, 469, 475, 849, 1666 |
| MhlI | GDGCHC | 8 cut(s) | 212, 388, 900, 1173, 1265, 1743, 1903, 3104 |
| MlyI | GAGTC | 2 cut(s) | 3077, 3389 |
| MmeI | TCCRAC | 5 cut(s) | 732, 912, 1818, 1943, 2255 |
| Mph1103I | ATGCAT | 2 cut(s) | 2436, 2776 |
| MroI | TCCGGA | 1 cut(s) | 472 |
| MroNI | GCCGGC | 2 cut(s) | 731, 758 |
| MroXI | GAANNNNTTC | 2 cut(s) | 970, 2937 |
| MseI | TTAA | 7 cut(s) | 26, 83, 140, 1698, 2373, 2601, 2724 |
| MslI | CAYNNNNRTG | 1 cut(s) | 381 |
| MspA1I | CMGCKG | 1 cut(s) | 642 |
| MspR9I | CCNGG | 8 cut(s) | 65, 213, 542, 702, 841, 1117, 1919, 2565 |
| MunI | CAATTG | 1 cut(s) | 3052 |
| Mva1269I | GAATGC | 3 cut(s) | 1816, 2776, 3250 |
| MvaI | CCWGG | 4 cut(s) | 65, 542, 841, 2565 |
| MvnI | CGCG | 4 cut(s) | 642, 1199, 1778, 3224 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1018, 1190, 1452, 2473 |
| NaeI | GCCGGC | 2 cut(s) | 733, 760 |
| NciI | CCSGG | 4 cut(s) | 213, 702, 1117, 1919 |
| NcoI | CCATGG | 2 cut(s) | 1495, 3278 |
| NdeI | CATATG | 1 cut(s) | 3198 |
| NgoMIV | GCCGGC | 2 cut(s) | 731, 758 |
| NmuCI | GTSAC | 2 cut(s) | 289, 835 |
| NruI | TCGCGA | 1 cut(s) | 1778 |
| NsiI | ATGCAT | 2 cut(s) | 2436, 2776 |
| NspI | RCATGY | 4 cut(s) | 697, 2434, 2600, 2723 |
| OliI | CACNNNNGTG | 1 cut(s) | 381 |
| PaqCI | CACCTGC | 1 cut(s) | 1963 |
| PceI | AGGCCT | 2 cut(s) | 2455, 3214 |
| PciI | ACATGT | 2 cut(s) | 2596, 2719 |
| PciSI | GCTCTTC | 1 cut(s) | 2090 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 771 |
| PctI | GAATGC | 3 cut(s) | 1816, 2776, 3250 |
| PdiI | GCCGGC | 2 cut(s) | 733, 760 |
| PdmI | GAANNNNTTC | 2 cut(s) | 970, 2937 |
| PflFI | GACNNNGTC | 2 cut(s) | 833, 2053 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1805, 2801 |
| PkrI | GCNGC | 8 cut(s) | 727, 730, 1111, 2469, 2740, 2887, 3245, 3392 |
| PleI | GAGTC | 2 cut(s) | 3077, 3388 |
| PpsI | GAGTC | 2 cut(s) | 3077, 3388 |
| Ppu21I | YACGTR | 2 cut(s) | 901, 2779 |
| PpuMI | RGGWCCY | 2 cut(s) | 871, 1568 |
| PscI | ACATGT | 2 cut(s) | 2596, 2719 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1986 |
| Psp124BI | GAGCTC | 1 cut(s) | 1173 |
| Psp5II | RGGWCCY | 2 cut(s) | 871, 1568 |
| Psp6I | CCWGG | 4 cut(s) | 63, 540, 839, 2563 |
| PspFI | CCCAGC | 2 cut(s) | 1648, 3061 |
| PspGI | CCWGG | 4 cut(s) | 63, 540, 839, 2563 |
| PspPPI | RGGWCCY | 2 cut(s) | 871, 1568 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1223, 1255 |
| PstI | CTGCAG | 1 cut(s) | 2488 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1603 |
| PsuI | RGATCY | 6 cut(s) | 433, 459, 469, 475, 849, 1666 |
| PsyI | GACNNNGTC | 2 cut(s) | 833, 2053 |
| RruI | TCGCGA | 1 cut(s) | 1778 |
| RseI | CAYNNNNRTG | 1 cut(s) | 381 |
| SacI | GAGCTC | 1 cut(s) | 1173 |
| SacII | CCGCGG | 1 cut(s) | 643 |
| SapI | GCTCTTC | 1 cut(s) | 2090 |
| SaqAI | TTAA | 7 cut(s) | 26, 83, 140, 1698, 2373, 2601, 2724 |
| SatI | GCNGC | 8 cut(s) | 726, 729, 1110, 2468, 2739, 2886, 3244, 3391 |
| ScaI | AGTACT | 2 cut(s) | 2642, 2840 |
| SchI | GAGTC | 2 cut(s) | 3077, 3389 |
| ScrFI | CCNGG | 8 cut(s) | 65, 213, 542, 702, 841, 1117, 1919, 2565 |
| SduI | GDGCHC | 8 cut(s) | 212, 388, 900, 1173, 1265, 1743, 1903, 3104 |
| SfaNI | GCATC | 9 cut(s) | 382, 1369, 1567, 1606, 1609, 2203, 2286, 2852, 3274 |
| SfcI | CTRYAG | 1 cut(s) | 2484 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 1452 |
| Sfr303I | CCGCGG | 1 cut(s) | 643 |
| SgrBI | CCGCGG | 1 cut(s) | 643 |
| SinI | GGWCC | 6 cut(s) | 871, 1119, 1320, 1502, 1568, 1921 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 381 |
| SmlI | CTYRAG | 2 cut(s) | 1863, 3071 |
| SmoI | CTYRAG | 2 cut(s) | 1863, 3071 |
| SnaBI | TACGTA | 1 cut(s) | 2779 |
| SseBI | AGGCCT | 2 cut(s) | 2455, 3214 |
| SspI | AATATT | 1 cut(s) | 2170 |
| SspMI | CTAG | 1 cut(s) | 2583 |
| SstI | GAGCTC | 1 cut(s) | 1173 |
| StuI | AGGCCT | 2 cut(s) | 2455, 3214 |
| StyD4I | CCNGG | 8 cut(s) | 63, 211, 540, 700, 839, 1115, 1917, 2563 |
| StyI | CCWWGG | 3 cut(s) | 1495, 1620, 3278 |
| TaaI | ACNGT | 6 cut(s) | 383, 1256, 2012, 2313, 2577, 3011 |
| TaiI | ACGT | 8 cut(s) | 229, 263, 714, 797, 903, 1070, 2781, 3308 |
| TaqII | GACCGA | 2 cut(s) | 1511, 1519 |
| TatI | WGTACW | 7 cut(s) | 1251, 1269, 1692, 1782, 2521, 2640, 2838 |
| TauI | GCSGC | 4 cut(s) | 728, 731, 1112, 3393 |
| Tru1I | TTAA | 7 cut(s) | 26, 83, 140, 1698, 2373, 2601, 2724 |
| Tru9I | TTAA | 7 cut(s) | 26, 83, 140, 1698, 2373, 2601, 2724 |
| TscAI | CASTG | 6 cut(s) | 430, 722, 1261, 2017, 2902, 3324 |
| TseFI | GTSAC | 2 cut(s) | 289, 835 |
| TseI | GCWGC | 4 cut(s) | 2467, 2738, 2885, 3243 |
| Tsp45I | GTSAC | 2 cut(s) | 289, 835 |
| TspDTI | ATGAA | 7 cut(s) | 992, 1139, 1599, 2615, 2834, 2918, 3243 |
| TspGWI | ACGGA | 5 cut(s) | 277, 514, 1998, 2958, 3123 |
| TspRI | CASTG | 6 cut(s) | 430, 722, 1261, 2017, 2902, 3324 |
| Tth111I | GACNNNGTC | 2 cut(s) | 833, 2053 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1805, 2801 |
| VneI | GTGCAC | 2 cut(s) | 384, 1261 |
| VpaK11BI | GGWCC | 6 cut(s) | 871, 1119, 1320, 1502, 1568, 1921 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2821 |
| XapI | RAATTY | 5 cut(s) | 197, 614, 1156, 1825, 2242 |
| XceI | RCATGY | 4 cut(s) | 697, 2434, 2600, 2723 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1129, 1496 |
| XmiI | GTMKAC | 4 cut(s) | 1929, 2224, 2758, 3295 |
| XmnI | GAANNNNTTC | 2 cut(s) | 970, 2937 |
| XspI | CTAG | 1 cut(s) | 2583 |
| ZraI | GACGTC | 1 cut(s) | 712 |
| ZrmI | AGTACT | 2 cut(s) | 2642, 2840 |
| Zsp2I | ATGCAT | 2 cut(s) | 2436, 2776 |