pycom08g06090

Vacuolar-processing enzyme-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0009785
Physical Location & Seq
Forward (+)
4650142 .. 4653735
3594 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g06090.3

Sequence Viewer

Length: 1644 bp
ATGTCCCCAGACAATGCGCTGACGTGTACGTCTCAGATTGCACAAACTCCTCAATCAAAGCGTTCTGATGGGGCCCACGTGACCACCAATAAATACCCACCCTTCAAACCTCCTTCTCTACCAATCGGACGCCCCCAATTTTCATCGGAAACAGCCATGACTCGGTTGGCCAGCGCCCTCGTCCTCCTGTTCCTCGCCTCCGTCTTGGCTTCTGCAGCCGGTAGCCGGGACCTTAACGGAGACGTTTTGCGATTACCTTCGGAAGCTTCCAGATTCTTTGGGCGAGGCGATGATGCTCCCGATCAGCAAGACGACGGCACCGTCGGGACCAGATGGGCTGTTCTCATCGCCGGCTCCAATGGATACTGGAATTACAGACATCAGGCTGATATTTGTCATGCCTATCAACTACTGAAGAAAGGAGGGTTGAAAGATGAAAACATCGTTGTATTCATGTACGATGATATTGCTTACAATGAAGAGAACCCTAGGCAAGGAGTCATCATTAACAGCCCGCATGGGAGTGACGTTTACAAAGGAGTTCCAAAGGATTACACTGGGCAAGATGTTACTGTGAACAACTTTTTTGCTGCTATCCTTGGGGACAAATCTGCTCTTACAGGGGGTAGTGGGAAGGTTGTGGATAGCGGTCCAAACGATCATATTTTCATATACTATTCCGATCATGGTGGTCCTGGAGTTCTTGGGATGCCGGGGATCAGTCCTTATATTTATGCCAACGATCTGATAGAAGTCCTGAAGAAGAAGCATGCTGCAGGAACCTATAAAAGCATGGTATTTTATCTCGAAGCTTGTGAATCTGGAAGCATCTTCGAGGGCCTTCTTCCTGAAGGTTTGAATATCTTTGCAACCACTGCATCAAATGCAGAAGAGAGCAGTTGGGGGACGTACTGCCCTGGAGAGTATCCCAGTCCTCCTCCAGAATATGAAACCTGCTTGGGCGACTTGTATAGTGTTGCGTGGATGGAAGACAGTGACATACACAACTTGAAGTCAGAAACCTTGAGCCAGCAGTATGAACTGGTTAAAACAAGGACAGCAAATGACAATTCTGGCCTTGGTTCTCATGTCATGCAATACGGCGATGTAGAGCTCAGCAAGAACAATATCTTTGTGTACATGGGGACAAATCCTGCAAACGAGAACTTTACTTTTCTGGGCCAGAACTCCTTGAGGCCATCTTCAAAAGCTGTCAACCAGCGTGATGCTGATCTTGTTCATTTCTGGCATAAGTATCGCAAGGCTCCTGAAGGATCACCAAGGAAAGTTCAAGCTCAAAAGGAATTTGTTGAAGCAATGTCTCATAGAATGCACATAGATGAAACCATGAAGCTCATTGGGAAACTCCTGTTTGGAATTGAAAAAGGTCCAGAAGTTCTCAACGCTGTTCGACCAGCTGGCCAGCCGCTCGTTGATGACTGGGACTGCCTTAAGACAATGGTGAGGAGTTTTGAGACACATTGTGGATCCCTATCTCAATACGGAATGAAACACATGCGTTCCCTGGCAAACATCTGCAACGCCGGCATGACAAAGGAGCAGATGGCCGAGGCTTCAGCACAAGCCTGCGTCAGCGCCCCTTCTGGTCGCTGGAGCTCCCTGCACATGGGATTCAGTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04142 ko04612 map04142 map04612
Pfam Domains
Protein Families
Peptidase_C13

Protein Analysis

548

Amino Acids

59.85

Weight (kDa)

5.68

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009785)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25940 AT4G32940
fragaria_vesca FvH4_2g32190 FvH4_2g32190 FvH4_2g32190 FvH4_2g32190
malus_domestica MD08G1073500.v1.1
prunus_persica Prupe.1G415000_v2.0.a1 Prupe.1G415000_v2.0.a1
pyrus_communis pycom08g06090 pycom15g05790
rosa_chinensis RchiOBHm_Chr6g0310481
rosa_laevigata RLG00000010479
rosa_multiflora Rmu_sc0035020.1_g000006
rosa_roxburghii Rroxscaffold_7G00158490
rosa_rugosa Rorug06G0380700
rosa_samantha Rh6AG494700 Rh6BG504400 Rh6CG509600 Rh6DG495600
rosa_wichuraiana Rw6G043030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 28, 320
Acc36I ACCTGC 1 cut(s) 962
AccB1I GGYRCC 1 cut(s) 317
AccBSI CCGCTC 1 cut(s) 1429
AciI CCGC 3 cut(s) 515, 648, 1427
AclWI GGATC 4 cut(s) 725, 1282, 1482, 1495
AcoI YGGCCR 3 cut(s) 168, 1420, 1566
AcsI RAATTY 1 cut(s) 1304
AcuI CTGAAG 5 cut(s) 434, 779, 870, 1290, 1560
AcvI CACGTG 1 cut(s) 79
AcyI GRCGYC 1 cut(s) 130
AdeI CACNNNGTG 1 cut(s) 1484
AfaI GTAC 4 cut(s) 28, 458, 911, 1139
AfiI CCNNNNNNNGG 4 cut(s) 162, 225, 494, 1627
AflII CTTAAG 1 cut(s) 1451
AflIII ACRYGT 1 cut(s) 23
AgsI TTSAA 8 cut(s) 106, 430, 859, 1012, 1206, 1292, 1313, 1382
AjiI CACGTC 1 cut(s) 24
AjnI CCWGG 3 cut(s) 694, 916, 1524
AluBI AGCT 8 cut(s) 266, 812, 1114, 1211, 1295, 1354, 1418, 1617
AluI AGCT 8 cut(s) 266, 812, 1114, 1211, 1295, 1354, 1418, 1617
Alw21I GWGCWC 2 cut(s) 1116, 1619
Alw26I GTCTC 4 cut(s) 36, 234, 1326, 1469
AlwI GGATC 4 cut(s) 725, 1282, 1482, 1495
AoxI GGCC 8 cut(s) 72, 168, 838, 1075, 1180, 1196, 1420, 1566
ApaI GGGCCC 1 cut(s) 76
ApeKI GCWGC 3 cut(s) 215, 590, 773
ApoI RAATTY 1 cut(s) 1304
AspA2I CCTAGG 1 cut(s) 488
AspLEI GCGC 3 cut(s) 19, 176, 1598
AspS9I GGNCC 9 cut(s) 72, 73, 229, 327, 650, 692, 838, 1180, 1388
AsuC2I CCSGG 2 cut(s) 227, 714
AsuHPI GGTGA 2 cut(s) 1269, 1474
AvaII GGWCC 5 cut(s) 229, 327, 650, 692, 1388
AvrII CCTAGG 1 cut(s) 488
BaeGI GKGCMC 1 cut(s) 76
BalI TGGCCA 2 cut(s) 170, 1422
BamHI GGATCC 1 cut(s) 1487
BanI GGYRCC 1 cut(s) 317
BanII GRGCYC 3 cut(s) 76, 1116, 1619
BbrPI CACGTG 1 cut(s) 79
BbsI GAAGAC 1 cut(s) 996
Bbv12I GWGCWC 2 cut(s) 1116, 1619
BbvI GCAGC 3 cut(s) 227, 577, 760
BccI CCATC 5 cut(s) 62, 327, 979, 1207, 1558
BceAI ACGGC 2 cut(s) 331, 1117
BcgI CGANNNNNNTGC 4 cut(s) 449, 483, 1238, 1272
BciT130I CCWGG 3 cut(s) 696, 918, 1526
BciVI GTATCC 2 cut(s) 356, 936
BcnI CCSGG 2 cut(s) 227, 714
BcoDI GTCTC 4 cut(s) 36, 234, 1326, 1469
BfaI CTAG 1 cut(s) 489
BfmI CTRYAG 2 cut(s) 213, 774
BfoI RGCGCY 2 cut(s) 177, 1599
BfrI CTTAAG 1 cut(s) 1451
BfuAI ACCTGC 1 cut(s) 962
BfuI GTATCC 2 cut(s) 356, 936
BisI GCNGC 4 cut(s) 216, 591, 774, 1427
BlnI CCTAGG 1 cut(s) 488
BlpI GCTNAGC 1 cut(s) 1115
BlsI GCNGC 4 cut(s) 217, 592, 775, 1428
Bme1390I CCNGG 5 cut(s) 227, 696, 714, 918, 1526
Bme18I GGWCC 5 cut(s) 229, 327, 650, 692, 1388
BmgBI CACGTC 1 cut(s) 24
BmgT120I GGNCC 9 cut(s) 72, 73, 229, 327, 650, 692, 838, 1180, 1388
BmiI GGNNCC 9 cut(s) 73, 74, 230, 319, 328, 355, 781, 1266, 1489
BmrFI CCNGG 5 cut(s) 227, 696, 714, 918, 1526
BmrI ACTGGG 3 cut(s) 567, 924, 1450
BmsI GCATC 5 cut(s) 283, 699, 837, 887, 1216
BmuI ACTGGG 3 cut(s) 567, 924, 1450
BpiI GAAGAC 1 cut(s) 996
BpmI CTGGAG 4 cut(s) 717, 924, 939, 1633
Bpu1102I GCTNAGC 1 cut(s) 1115
BpuEI CTTGAG 2 cut(s) 1045, 1213
BpuMI CCSGG 2 cut(s) 227, 714
BsaAI YACGTR 1 cut(s) 79
BsaBI GATNNNNATC 2 cut(s) 1230, 1492
BsaHI GRCGYC 1 cut(s) 130
BsaJI CCNNGG 8 cut(s) 488, 598, 713, 916, 1078, 1280, 1524, 1569
Bsc4I CCNNNNNNNGG 4 cut(s) 162, 225, 494, 1627
Bse118I RCCGGY 3 cut(s) 218, 350, 1544
Bse1I ACTGG 5 cut(s) 371, 562, 930, 1047, 1445
Bse3DI GCAATG 1 cut(s) 1323
Bse8I GATNNNNATC 2 cut(s) 1230, 1492
BseBI CCWGG 3 cut(s) 696, 918, 1526
BseDI CCNNGG 8 cut(s) 488, 598, 713, 916, 1078, 1280, 1524, 1569
BseGI GGATG 2 cut(s) 714, 990
BseJI GATNNNNATC 2 cut(s) 1230, 1492
BseLI CCNNNNNNNGG 4 cut(s) 162, 225, 494, 1627
BseMI GCAATG 1 cut(s) 1323
BseMII CTCAG 2 cut(s) 47, 1129
BseNI ACTGG 5 cut(s) 371, 562, 930, 1047, 1445
BseRI GAGGAG 3 cut(s) 39, 927, 1480
BseSI GKGCMC 1 cut(s) 76
BseXI GCAGC 3 cut(s) 227, 577, 760
BsgI GTGCAG 1 cut(s) 1607
BshFI GGCC 8 cut(s) 74, 170, 840, 1077, 1182, 1198, 1422, 1568
BshNI GGYRCC 1 cut(s) 317
BsiHKAI GWGCWC 2 cut(s) 1116, 1619
BsiSI CCGG 5 cut(s) 219, 226, 351, 713, 1545
BslFI GGGAC 6 cut(s) 242, 340, 617, 919, 1159, 1457
BslI CCNNNNNNNGG 4 cut(s) 162, 225, 494, 1627
BsmAI GTCTC 4 cut(s) 36, 234, 1326, 1469
BsmBI CGTCTC 2 cut(s) 36, 234
BsmFI GGGAC 6 cut(s) 242, 340, 617, 919, 1159, 1457
BsmI GAATGC 1 cut(s) 1335
BsnI GGCC 8 cut(s) 74, 170, 840, 1077, 1182, 1198, 1422, 1568
Bsp120I GGGCCC 1 cut(s) 72
Bsp1286I GDGCHC 3 cut(s) 76, 1116, 1619
Bsp1407I TGTACA 1 cut(s) 1137
Bsp143I GATC 8 cut(s) 301, 658, 682, 717, 742, 1231, 1274, 1487
Bsp1720I GCTNAGC 1 cut(s) 1115
BspACI CCGC 3 cut(s) 515, 648, 1427
BspANI GGCC 8 cut(s) 74, 170, 840, 1077, 1182, 1198, 1422, 1568
BspCNI CTCAG 2 cut(s) 46, 1128
BspLI GGNNCC 9 cut(s) 73, 74, 230, 319, 328, 355, 781, 1266, 1489
BspMAI CTGCAG 2 cut(s) 217, 778
BspMI ACCTGC 1 cut(s) 962
BspPI GGATC 4 cut(s) 725, 1282, 1482, 1495
BspT107I GGYRCC 1 cut(s) 317
BspTI CTTAAG 1 cut(s) 1451
BsrBI CCGCTC 1 cut(s) 1429
BsrDI GCAATG 1 cut(s) 1323
BsrFI RCCGGY 3 cut(s) 218, 350, 1544
BsrGI TGTACA 1 cut(s) 1137
BsrI ACTGG 5 cut(s) 371, 562, 930, 1047, 1445
BssAI RCCGGY 3 cut(s) 218, 350, 1544
BssECI CCNNGG 8 cut(s) 488, 598, 713, 916, 1078, 1280, 1524, 1569
BssMI GATC 8 cut(s) 301, 658, 682, 717, 742, 1231, 1274, 1487
BssNI GRCGYC 1 cut(s) 130
BssT1I CCWWGG 4 cut(s) 488, 598, 1078, 1280
Bst2UI CCWGG 3 cut(s) 696, 918, 1526
Bst4CI ACNGT 3 cut(s) 322, 574, 995
Bst6I CTCTTC 2 cut(s) 474, 885
BstACI GRCGYC 1 cut(s) 130
BstAFI CTTAAG 1 cut(s) 1451
BstAPI GCANNNNNTGC 2 cut(s) 875, 884
BstAUI TGTACA 1 cut(s) 1137
BstBAI YACGTR 1 cut(s) 79
BstC8I GCNNGC 9 cut(s) 172, 352, 515, 771, 1031, 1420, 1424, 1546, 1588
BstDEI CTNAG 2 cut(s) 33, 1115
BstENI CCTNNNNNAGG 1 cut(s) 492
BstF5I GGATG 2 cut(s) 714, 990
BstH2I RGCGCY 2 cut(s) 177, 1599
BstHHI GCGC 3 cut(s) 19, 176, 1598
BstKTI GATC 8 cut(s) 304, 661, 685, 720, 745, 1234, 1277, 1490
BstMAI GTCTC 4 cut(s) 36, 234, 1326, 1469
BstMBI GATC 8 cut(s) 301, 658, 682, 717, 742, 1231, 1274, 1487
BstMWI GCNNNNNNNGC 4 cut(s) 215, 875, 884, 1545
BstNI CCWGG 3 cut(s) 696, 918, 1526
BstNSI RCATGY 2 cut(s) 773, 1519
BstSCI CCNGG 5 cut(s) 225, 694, 712, 916, 1524
BstSFI CTRYAG 2 cut(s) 213, 774
BstSLI GKGCMC 1 cut(s) 76
BstV1I GCAGC 3 cut(s) 227, 577, 760
BstV2I GAAGAC 1 cut(s) 996
BstX2I RGATCY 1 cut(s) 1487
BstYI RGATCY 1 cut(s) 1487
BsuI GTATCC 2 cut(s) 356, 936
BsuRI GGCC 8 cut(s) 74, 170, 840, 1077, 1182, 1198, 1422, 1568
BtgZI GCGATG 3 cut(s) 303, 331, 1119
BtrI CACGTC 1 cut(s) 24
BtsCI GGATG 2 cut(s) 714, 990
BtsI GCAGTG 1 cut(s) 873
BtsIMutI CAGTG 4 cut(s) 555, 873, 1000, 1642
BveI ACCTGC 1 cut(s) 962
Cac8I GCNNGC 9 cut(s) 172, 352, 515, 771, 1031, 1420, 1424, 1546, 1588
CfoI GCGC 3 cut(s) 19, 176, 1598
Cfr10I RCCGGY 3 cut(s) 218, 350, 1544
Cfr13I GGNCC 9 cut(s) 72, 73, 229, 327, 650, 692, 838, 1180, 1388
CseI GACGC 2 cut(s) 138, 1579
Csp6I GTAC 4 cut(s) 27, 457, 910, 1138
CviQI GTAC 4 cut(s) 27, 457, 910, 1138
DdeI CTNAG 2 cut(s) 33, 1115
DpnI GATC 8 cut(s) 303, 660, 684, 719, 744, 1233, 1276, 1489
DpnII GATC 8 cut(s) 301, 658, 682, 717, 742, 1231, 1274, 1487
DraIII CACNNNGTG 1 cut(s) 1484
DrdI GACNNNNNNGTC 2 cut(s) 28, 320
DseDI GACNNNNNNGTC 2 cut(s) 28, 320
EaeI YGGCCR 3 cut(s) 168, 1420, 1566
Eam1104I CTCTTC 2 cut(s) 474, 885
EarI CTCTTC 2 cut(s) 474, 885
Ecl136II GAGCTC 2 cut(s) 1114, 1617
Eco130I CCWWGG 4 cut(s) 488, 598, 1078, 1280
Eco24I GRGCYC 3 cut(s) 76, 1116, 1619
Eco47I GGWCC 5 cut(s) 229, 327, 650, 692, 1388
Eco53kI GAGCTC 2 cut(s) 1114, 1617
Eco57I CTGAAG 5 cut(s) 434, 779, 870, 1290, 1560
Eco72I CACGTG 1 cut(s) 79
EcoICRI GAGCTC 2 cut(s) 1114, 1617
EcoNI CCTNNNNNAGG 1 cut(s) 492
EcoO109I RGGNCCY 3 cut(s) 72, 229, 838
EcoRII CCWGG 3 cut(s) 694, 916, 1524
EcoT14I CCWWGG 4 cut(s) 488, 598, 1078, 1280
EcoT38I GRGCYC 3 cut(s) 76, 1116, 1619
ErhI CCWWGG 4 cut(s) 488, 598, 1078, 1280
Esp3I CGTCTC 2 cut(s) 36, 234
FaqI GGGAC 6 cut(s) 242, 340, 617, 919, 1159, 1457
FauI CCCGC 1 cut(s) 522
Fnu4HI GCNGC 4 cut(s) 216, 591, 774, 1427
FokI GGATG 2 cut(s) 721, 997
FriOI GRGCYC 3 cut(s) 76, 1116, 1619
Fsp4HI GCNGC 4 cut(s) 216, 591, 774, 1427
FspBI CTAG 1 cut(s) 489
GlaI GCGC 3 cut(s) 18, 175, 1597
GluI GCNGC 4 cut(s) 216, 591, 774, 1427
GsuI CTGGAG 4 cut(s) 717, 924, 939, 1633
HaeII RGCGCY 2 cut(s) 177, 1599
HaeIII GGCC 8 cut(s) 74, 170, 840, 1077, 1182, 1198, 1422, 1568
HapII CCGG 5 cut(s) 219, 226, 351, 713, 1545
HgaI GACGC 2 cut(s) 138, 1579
HhaI GCGC 3 cut(s) 19, 176, 1598
Hin1I GRCGYC 1 cut(s) 130
Hin6I GCGC 3 cut(s) 17, 174, 1596
HinP1I GCGC 3 cut(s) 17, 174, 1596
HincII GTYRAC 1 cut(s) 1216
HindII GTYRAC 1 cut(s) 1216
HindIII AAGCTT 2 cut(s) 264, 810
HinfI GANTC 5 cut(s) 160, 273, 498, 818, 1632
HpaII CCGG 5 cut(s) 219, 226, 351, 713, 1545
HphI GGTGA 2 cut(s) 1269, 1474
Hpy166II GTNNAC 5 cut(s) 27, 532, 577, 1138, 1216
Hpy188I TCNGA 8 cut(s) 36, 67, 128, 148, 262, 682, 747, 1018
Hpy8I GTNNAC 5 cut(s) 27, 532, 577, 1138, 1216
Hpy99I CGWCG 2 cut(s) 317, 326
HpyAV CCTTC 8 cut(s) 112, 123, 267, 628, 845, 851, 1265, 1611
HpyCH4III ACNGT 3 cut(s) 322, 574, 995
HpyCH4IV ACGT 6 cut(s) 23, 29, 78, 243, 528, 908
HpyF10VI GCNNNNNNNGC 4 cut(s) 215, 875, 884, 1545
HpyF3I CTNAG 2 cut(s) 33, 1115
HpySE526I ACGT 6 cut(s) 23, 29, 78, 243, 528, 908
Hsp92I GRCGYC 1 cut(s) 130
HspAI GCGC 3 cut(s) 17, 174, 1596
KroI GCCGGC 2 cut(s) 350, 1544
KroNI GCCGGC 2 cut(s) 352, 1546
Kzo9I GATC 8 cut(s) 301, 658, 682, 717, 742, 1231, 1274, 1487
LmnI GCTCC 6 cut(s) 301, 359, 1270, 1558, 1614, 1622
Lsp1109I GCAGC 3 cut(s) 227, 577, 760
LweI GCATC 5 cut(s) 283, 699, 837, 887, 1216
MaeI CTAG 1 cut(s) 489
MaeII ACGT 6 cut(s) 23, 29, 78, 243, 528, 908
MaeIII GTNAC 4 cut(s) 79, 524, 568, 995
MalI GATC 8 cut(s) 303, 660, 684, 719, 744, 1233, 1276, 1489
MbiI CCGCTC 1 cut(s) 1429
MboI GATC 8 cut(s) 301, 658, 682, 717, 742, 1231, 1274, 1487
MboII GAAGA 9 cut(s) 427, 491, 772, 775, 823, 836, 902, 1001, 1194
MflI RGATCY 1 cut(s) 1487
MhlI GDGCHC 3 cut(s) 76, 1116, 1619
MlsI TGGCCA 2 cut(s) 170, 1422
MluCI AATT 5 cut(s) 137, 370, 1069, 1304, 1377
MluNI TGGCCA 2 cut(s) 170, 1422
MlyI GAGTC 2 cut(s) 154, 507
Mox20I TGGCCA 2 cut(s) 170, 1422
MroNI GCCGGC 2 cut(s) 350, 1544
MscI TGGCCA 2 cut(s) 170, 1422
MseI TTAA 4 cut(s) 234, 507, 1047, 1452
MslI CAYNNNNRTG 2 cut(s) 522, 1338
Msp20I TGGCCA 2 cut(s) 170, 1422
MspA1I CMGCKG 1 cut(s) 1418
MspCI CTTAAG 1 cut(s) 1451
MspI CCGG 5 cut(s) 219, 226, 351, 713, 1545
MspR9I CCNGG 5 cut(s) 227, 696, 714, 918, 1526
Mva1269I GAATGC 1 cut(s) 1335
MvaI CCWGG 3 cut(s) 696, 918, 1526
MwoI GCNNNNNNNGC 4 cut(s) 215, 875, 884, 1545
NaeI GCCGGC 2 cut(s) 352, 1546
NciI CCSGG 2 cut(s) 227, 714
NdeII GATC 8 cut(s) 301, 658, 682, 717, 742, 1231, 1274, 1487
NgoMIV GCCGGC 2 cut(s) 350, 1544
NlaIV GGNNCC 9 cut(s) 73, 74, 230, 319, 328, 355, 781, 1266, 1489
NmeAIII GCCGAG 1 cut(s) 1594
NmuCI GTSAC 3 cut(s) 79, 524, 995
NspI RCATGY 2 cut(s) 773, 1519
PaeI GCATGC 1 cut(s) 773
PcsI WCGNNNNNNNCGW 1 cut(s) 318
PctI GAATGC 1 cut(s) 1335
PdiI GCCGGC 2 cut(s) 352, 1546
PfeI GAWTC 3 cut(s) 273, 818, 1632
PfoI TCCNGGA 1 cut(s) 694
PkrI GCNGC 4 cut(s) 217, 592, 775, 1428
PleI GAGTC 2 cut(s) 154, 506
PmaCI CACGTG 1 cut(s) 79
PmlI CACGTG 1 cut(s) 79
PpsI GAGTC 2 cut(s) 154, 506
Ppu21I YACGTR 1 cut(s) 79
PpuMI RGGWCCY 1 cut(s) 229
Psp124BI GAGCTC 2 cut(s) 1116, 1619
Psp5II RGGWCCY 1 cut(s) 229
Psp6I CCWGG 3 cut(s) 694, 916, 1524
PspCI CACGTG 1 cut(s) 79
PspGI CCWGG 3 cut(s) 694, 916, 1524
PspN4I GGNNCC 9 cut(s) 73, 74, 230, 319, 328, 355, 781, 1266, 1489
PspOMI GGGCCC 1 cut(s) 72
PspPI GGNCC 9 cut(s) 72, 73, 229, 327, 650, 692, 838, 1180, 1388
PspPPI RGGWCCY 1 cut(s) 229
PstI CTGCAG 2 cut(s) 217, 778
PsuI RGATCY 1 cut(s) 1487
PvuII CAGCTG 1 cut(s) 1418
RsaI GTAC 4 cut(s) 28, 458, 911, 1139
RsaNI GTAC 4 cut(s) 27, 457, 910, 1138
RseI CAYNNNNRTG 2 cut(s) 522, 1338
SacI GAGCTC 2 cut(s) 1116, 1619
SaqAI TTAA 4 cut(s) 234, 507, 1047, 1452
SatI GCNGC 4 cut(s) 216, 591, 774, 1427
Sau3AI GATC 8 cut(s) 301, 658, 682, 717, 742, 1231, 1274, 1487
Sau96I GGNCC 9 cut(s) 72, 73, 229, 327, 650, 692, 838, 1180, 1388
SchI GAGTC 2 cut(s) 154, 507
ScrFI CCNGG 5 cut(s) 227, 696, 714, 918, 1526
SduI GDGCHC 3 cut(s) 76, 1116, 1619
SfaNI GCATC 5 cut(s) 283, 699, 837, 887, 1216
SfcI CTRYAG 2 cut(s) 213, 774
SinI GGWCC 5 cut(s) 229, 327, 650, 692, 1388
SmiMI CAYNNNNRTG 2 cut(s) 522, 1338
SmlI CTYRAG 3 cut(s) 1024, 1192, 1451
SmoI CTYRAG 3 cut(s) 1024, 1192, 1451
SphI GCATGC 1 cut(s) 773
Sse9I AATT 5 cut(s) 137, 370, 1069, 1304, 1377
SsiI CCGC 3 cut(s) 515, 648, 1427
SspMI CTAG 1 cut(s) 489
SstI GAGCTC 2 cut(s) 1116, 1619
StyD4I CCNGG 5 cut(s) 225, 694, 712, 916, 1524
StyI CCWWGG 4 cut(s) 488, 598, 1078, 1280
TaaI ACNGT 3 cut(s) 322, 574, 995
TaiI ACGT 6 cut(s) 26, 32, 81, 246, 531, 911
TaqI TCGA 3 cut(s) 807, 834, 1411
TasI AATT 5 cut(s) 137, 370, 1069, 1304, 1377
TatI WGTACW 1 cut(s) 1137
TauI GCSGC 1 cut(s) 1429
TfiI GAWTC 3 cut(s) 273, 818, 1632
Tru1I TTAA 4 cut(s) 234, 507, 1047, 1452
Tru9I TTAA 4 cut(s) 234, 507, 1047, 1452
TscAI CASTG 4 cut(s) 562, 880, 1000, 1642
TseFI GTSAC 3 cut(s) 79, 524, 995
TseI GCWGC 3 cut(s) 215, 590, 773
Tsp45I GTSAC 3 cut(s) 79, 524, 995
TspGWI ACGGA 3 cut(s) 190, 252, 1518
TspRI CASTG 4 cut(s) 562, 880, 1000, 1642
Vha464I CTTAAG 1 cut(s) 1451
VpaK11BI GGWCC 5 cut(s) 229, 327, 650, 692, 1388
XagI CCTNNNNNAGG 1 cut(s) 492
XapI RAATTY 1 cut(s) 1304
XceI RCATGY 2 cut(s) 773, 1519
XcmI CCANNNNNNNNNTGG 1 cut(s) 163
XmaJI CCTAGG 1 cut(s) 488
XspI CTAG 1 cut(s) 489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.