Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0008275

Physical Location & Seq

Genomic Coordinates Reverse (-)

5857219 .. 5862326

Gene Structure 5108 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g07270.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGCTCAGCGGACCTCGCTCCTTCTCATCTACTTCCTGCTGCTGAACCTCTGCTGCGCGTTTGCTTCACTCTCCGACGACCACCGCCGTCCGATGATCCTCCCTCTCCATCTCTCGTCTCCCAAATCCAATTGGCTCCACCGGCGACCCTTCGACGGCCGGCGGCTCCAGAGATCGGTGCCCAACGCCCACATGAGGCTCTATGACGACCTCCTTGCCAACGGGTACTACACGACGCGGCTGTGGATTGGGACGCCGCCGCAGCAATTCGCACTGATTGTGGATACGGGAAGTACGGTGACTTATGTGCCTTGCTTTGACTGTGCGCAGTGTGGTTATCATCAGGACCCCAGGTTCCAGCCCGATTTATCTAGTACATATCAACCTGTGAAGTGTAATAGCAATTGTAACTGTGACAATAAAGAAGCTCAATGCACTTATGAACGGCGGTATGCTGAGATGAGCTCTAGTAGTGGGGTACTTGGTGAGGACGTCATTTCTTTTGGTAACGAGAGTGTTCTTGTGCCCCAGCGTGCTGTTTTTGGTTGTGAAAATATTGAAACTGGTGATCTTTACCGTCAACGTGCTGATGGCATTATCGGTTTGGGTCGTGGTCAACTCAGTGTGATGGATCAACTTGTTGACAAGGGTGTTATTAGTGACTCATTCTCATTATGCTATGGAGGGATGGGTGTAGGAGGGGGTGCCATGGTTCTTGGTGGGATGAAATCTCCCCCTGATATGGTATTTGCCAATTCAGATCGCTTTCGCAGTCCATATTACAACATTGACCTGAAGGAAATACATGTGGCCGGCCAACCTTTGAAGTTAAATCCCAAGATCTATGATGGCAAGCATGGAACTGTATTGGATAGTGGAACTACTTATGCGTACCTTCCAAAGGATGCTTTTCATGCGTTTAAGGATGCTATTAAGAGGCAAATTGAGTCCCTCAAACAAATCCATGGTCCTGACCCAAATTATCAAGATATTTGTTTTTCAGGAGCTGGAAGGGATGTCACCCAACTATCAAAAGTTTTTCCACAGGTTGATATGGTATTCGGCAATGGGCAGAAGTTATCACTGTCTCCAGAGAACTACCTGTTCCCGCATACAAAGGTTGGTGGTGCTTATTGCCTGGGGGTTTTTGAAAATGGTGATGATACTACCCTTTTAGGAGGAATCATTACACGTAATACCCTTGTGACTTATGACCGGAAAAACGATAAGATTGGCTTTTGGAAAACTAATTGTTCTGAACTATGGAAGAGATTGAATTATAATAATGCCCCACCTCCAGCACCTTTAGCTTCTGATGGCCGGAATATGAGTGTAGAAATTTCTCCTAACATTGCCCCAGGTGGATTGCCTGAAACATTTCTTCCAGGTGAACTTCAAATAGGGCTAATAAGTTTCGATATGATGCTGAGCATCAATAACACTATGAAACCCAACTTCACAGAACTGGCAGATTCTATTGCTCATGAGCTGGAAGTAGATATTTCCCAGGTTCACTTAATGAACTACACCAATATGGGAAATGGTTTCGTTGTTAGATGGACAATCTTCCCTGCTGAACCTGCAACTTGCTTTTCTGCTGCAAAAGCAATGGGCATAATTGTGCGCTTAAAGGAACATCATATGCAGCTTCCTCAGAAATTTGGAAGTTATCAGTTGGTCAAAGTAAAGGCTGAGCCTGGGAAGAAGCGGTCGTGGTGGGAGCAACACTCTTTGGCGGTGGTAGTTGGAGCTATAGTTACCTCAGCTGTTGGATTATTAGCATTAGGGACATGGCTGGTTAGGAAATACAAGTTGCAAGACATCGTTTCGTATGAGCCAGTTGGTGCCAGTTCCATTGTTCCTGAGCAAGAGCTTCAACCGCTTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

630

Amino Acids

69.83

Weight (kDa)

6.93

Isoelectric Point (pI)

42.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43100 AT5G43100
fragaria_vesca	FvH4_2g33420
malus_domestica	MD08G1089200.v1.1 MD08G1089400.v1.1 MD15G1074000.v1.1
prunus_persica	Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1
pyrus_communis	pycom08g07250 pycom08g07270 pycom15g06910
rosa_chinensis	RchiOBHm_Chr6g0309111
rosa_laevigata	RLG00000010588
rosa_roxburghii	Rroxscaffold_7G00159640
rosa_rugosa	Rorug06G0369800
rosa_samantha	Rh6AG482600 Rh6BG491600 Rh6BG491700 Rh6CG496400 Rh6DG483300
rosa_wichuraiana	Rw6G042020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1281
AatII	GACGTC	1 cut(s)	495
Acc16I	TGCGCA	1 cut(s)	327
Acc36I	ACCTGC	1 cut(s)	1588
AccB1I	GGYRCC	3 cut(s)	178, 704, 1844
AccII	CGCG	2 cut(s)	59, 238
AclWI	GGATC	2 cut(s)	91, 639
AcoI	YGGCCR	4 cut(s)	157, 810, 814, 1318
AcsI	RAATTY	2 cut(s)	1338, 1658
AcuI	CTGAAG	1 cut(s)	815
AcyI	GRCGYC	2 cut(s)	254, 492
AfaI	GTAC	5 cut(s)	227, 295, 376, 480, 893
AfiI	CCNNNNNNNGG	5 cut(s)	155, 175, 195, 742, 901
AflIII	ACRYGT	2 cut(s)	805, 1190
AgsI	TTSAA	6 cut(s)	560, 826, 1151, 1276, 1397, 1877
AjnI	CCWGG	6 cut(s)	350, 1137, 1357, 1384, 1506, 1696
AloI	GAACNNNNNNTCC	2 cut(s)	338, 370
AluBI	AGCT	9 cut(s)	428, 465, 1007, 1310, 1489, 1648, 1751, 1766, 1873
AluI	AGCT	9 cut(s)	428, 465, 1007, 1310, 1489, 1648, 1751, 1766, 1873
Alw21I	GWGCWC	1 cut(s)	467
Alw26I	GTCTC	2 cut(s)	123, 1092
AlwI	GGATC	2 cut(s)	91, 639
AlwNI	CAGNNNCTG	1 cut(s)	1007
AoxI	GGCC	4 cut(s)	157, 810, 814, 1318
ApeKI	GCWGC	5 cut(s)	40, 54, 262, 1598, 1645
ApoI	RAATTY	2 cut(s)	1338, 1658
ArsI	GACNNNNNNTTYG	2 cut(s)	952, 984
Asp700I	GAANNNNTTC	1 cut(s)	1377
AspLEI	GCGC	3 cut(s)	59, 328, 1626
AspS9I	GGNCC	3 cut(s)	12, 346, 968
AsuHPI	GGTGA	6 cut(s)	310, 497, 578, 1012, 1169, 1400
AvaII	GGWCC	3 cut(s)	12, 346, 968
BaeGI	GKGCMC	2 cut(s)	183, 528
BanI	GGYRCC	3 cut(s)	178, 704, 1844
BanII	GRGCYC	1 cut(s)	467
Bbv12I	GWGCWC	1 cut(s)	467
BbvCI	CCTCAGC	1 cut(s)	1762
BbvI	GCAGC	5 cut(s)	27, 41, 274, 1585, 1657
BccI	CCATC	7 cut(s)	117, 584, 622, 682, 842, 1310, 1551
BceAI	ACGGC	3 cut(s)	72, 172, 461
BcgI	CGANNNNNNTGC	2 cut(s)	197, 231
BciT130I	CCWGG	6 cut(s)	352, 1139, 1359, 1386, 1508, 1698
BciVI	GTATCC	1 cut(s)	277
BcoDI	GTCTC	2 cut(s)	123, 1092
BfaI	CTAG	2 cut(s)	372, 468
BfmI	CTRYAG	1 cut(s)	1752
BfuAI	ACCTGC	1 cut(s)	1588
BfuI	GTATCC	1 cut(s)	277
BglII	AGATCT	1 cut(s)	840
BisI	GCNGC	9 cut(s)	41, 55, 164, 239, 257, 260, 263, 1599, 1646
BlpI	GCTNAGC	3 cut(s)	6, 1427, 1692
BlsI	GCNGC	9 cut(s)	42, 56, 165, 240, 258, 261, 264, 1600, 1647
Bme1390I	CCNGG	6 cut(s)	352, 1139, 1359, 1386, 1508, 1698
Bme18I	GGWCC	3 cut(s)	12, 346, 968
BmgT120I	GGNCC	3 cut(s)	12, 346, 968
BmiI	GGNNCC	7 cut(s)	137, 167, 180, 348, 356, 706, 1846
BmrFI	CCNGG	6 cut(s)	352, 1139, 1359, 1386, 1508, 1698
BmsI	GCATC	4 cut(s)	895, 916, 1413, 1440
BplI	GAGNNNNNCTC	4 cut(s)	449, 481, 1712, 1744
BpmI	CTGGAG	3 cut(s)	152, 1074, 1281
Bpu10I	CCTNAGC	2 cut(s)	1762, 1863
Bpu1102I	GCTNAGC	3 cut(s)	6, 1427, 1692
BsaAI	YACGTR	1 cut(s)	1193
BsaHI	GRCGYC	2 cut(s)	254, 492
BsaJI	CCNNGG	7 cut(s)	350, 708, 964, 1138, 1357, 1506, 1697
BsaWI	WCCGGW	1 cut(s)	1215
BsaXI	ACNNNNNCTCC	2 cut(s)	1740, 1770
Bsc4I	CCNNNNNNNGG	5 cut(s)	155, 175, 195, 742, 901
Bse118I	RCCGGY	3 cut(s)	141, 159, 812
Bse1I	ACTGG	4 cut(s)	568, 1470, 1838, 1848
Bse3DI	GCAATG	3 cut(s)	1072, 1350, 1614
BseBI	CCWGG	6 cut(s)	352, 1139, 1359, 1386, 1508, 1698
BseDI	CCNNGG	7 cut(s)	350, 708, 964, 1138, 1357, 1506, 1697
BseGI	GGATG	5 cut(s)	693, 729, 910, 931, 1021
BseLI	CCNNNNNNNGG	5 cut(s)	155, 175, 195, 742, 901
BseMI	GCAATG	3 cut(s)	1072, 1350, 1614
BseMII	CTCAG	8 cut(s)	20, 447, 634, 1418, 1667, 1683, 1776, 1854
BseNI	ACTGG	4 cut(s)	568, 1470, 1838, 1848
BseSI	GKGCMC	2 cut(s)	183, 528
BseX3I	CGGCCG	1 cut(s)	157
BseXI	GCAGC	5 cut(s)	27, 41, 274, 1585, 1657
BseYI	CCCAGC	1 cut(s)	528
Bsh1236I	CGCG	2 cut(s)	59, 238
Bsh1285I	CGRYCG	2 cut(s)	160, 1712
BshFI	GGCC	4 cut(s)	159, 812, 816, 1320
BshNI	GGYRCC	3 cut(s)	178, 704, 1844
BsiEI	CGRYCG	2 cut(s)	160, 1712
BsiHKAI	GWGCWC	1 cut(s)	467
BsiSI	CCGG	5 cut(s)	142, 160, 813, 1216, 1321
BslFI	GGGAC	3 cut(s)	265, 934, 1801
BslI	CCNNNNNNNGG	5 cut(s)	155, 175, 195, 742, 901
BsmAI	GTCTC	2 cut(s)	123, 1092
BsmBI	CGTCTC	1 cut(s)	123
BsmFI	GGGAC	3 cut(s)	265, 934, 1801
BsnI	GGCC	4 cut(s)	159, 812, 816, 1320
Bsp1286I	GDGCHC	3 cut(s)	183, 467, 528
Bsp143I	GATC	6 cut(s)	96, 173, 568, 631, 760, 840
Bsp1720I	GCTNAGC	3 cut(s)	6, 1427, 1692
Bsp19I	CCATGG	2 cut(s)	708, 964
BspANI	GGCC	4 cut(s)	159, 812, 816, 1320
BspCNI	CTCAG	8 cut(s)	19, 448, 633, 1419, 1666, 1684, 1775, 1855
BspFNI	CGCG	2 cut(s)	59, 238
BspHI	TCATGA	1 cut(s)	1483
BspLI	GGNNCC	7 cut(s)	137, 167, 180, 348, 356, 706, 1846
BspMI	ACCTGC	1 cut(s)	1588
BspPI	GGATC	2 cut(s)	91, 639
BspT107I	GGYRCC	3 cut(s)	178, 704, 1844
BsrDI	GCAATG	3 cut(s)	1072, 1350, 1614
BsrFI	RCCGGY	3 cut(s)	141, 159, 812
BsrI	ACTGG	4 cut(s)	568, 1470, 1838, 1848
BssAI	RCCGGY	3 cut(s)	141, 159, 812
BssECI	CCNNGG	7 cut(s)	350, 708, 964, 1138, 1357, 1506, 1697
BssMI	GATC	6 cut(s)	96, 173, 568, 631, 760, 840
BssNI	GRCGYC	2 cut(s)	254, 492
BssT1I	CCWWGG	2 cut(s)	708, 964
Bst2UI	CCWGG	6 cut(s)	352, 1139, 1359, 1386, 1508, 1698
Bst4CI	ACNGT	6 cut(s)	298, 323, 413, 578, 865, 1086
Bst6I	CTCTTC	1 cut(s)	1262
BstACI	GRCGYC	2 cut(s)	254, 492
BstBAI	YACGTR	1 cut(s)	1193
BstC8I	GCNNGC	4 cut(s)	161, 534, 814, 854
BstDEI	CTNAG	9 cut(s)	6, 456, 620, 1427, 1653, 1692, 1762, 1863, 1883
BstDSI	CCRYGG	2 cut(s)	708, 964
BstENI	CCTNNNNNAGG	1 cut(s)	899
BstF5I	GGATG	5 cut(s)	693, 729, 910, 931, 1021
BstFNI	CGCG	2 cut(s)	59, 238
BstHHI	GCGC	3 cut(s)	59, 328, 1626
BstKTI	GATC	6 cut(s)	99, 176, 571, 634, 763, 843
BstMAI	GTCTC	2 cut(s)	123, 1092
BstMBI	GATC	6 cut(s)	96, 173, 568, 631, 760, 840
BstMCI	CGRYCG	2 cut(s)	160, 1712
BstMWI	GCNNNNNNNGC	8 cut(s)	16, 142, 262, 914, 1307, 1580, 1604, 1879
BstNI	CCWGG	6 cut(s)	352, 1139, 1359, 1386, 1508, 1698
BstNSI	RCATGY	1 cut(s)	809
BstSCI	CCNGG	6 cut(s)	350, 1137, 1357, 1384, 1506, 1696
BstSFI	CTRYAG	1 cut(s)	1752
BstSLI	GKGCMC	2 cut(s)	183, 528
BstUI	CGCG	2 cut(s)	59, 238
BstV1I	GCAGC	5 cut(s)	27, 41, 274, 1585, 1657
BstX2I	RGATCY	1 cut(s)	840
BstYI	RGATCY	1 cut(s)	840
BstZI	CGGCCG	1 cut(s)	157
BsuI	GTATCC	1 cut(s)	277
BsuRI	GGCC	4 cut(s)	159, 812, 816, 1320
BtgI	CCRYGG	2 cut(s)	708, 964
BtsCI	GGATG	5 cut(s)	693, 729, 910, 931, 1021
BtsI	GCAGTG	1 cut(s)	335
BtsIMutI	CAGTG	4 cut(s)	272, 335, 628, 1082
BveI	ACCTGC	1 cut(s)	1588
Cac8I	GCNNGC	4 cut(s)	161, 534, 814, 854
CaiI	CAGNNNCTG	1 cut(s)	1007
CciI	TCATGA	1 cut(s)	1483
CfoI	GCGC	3 cut(s)	59, 328, 1626
Cfr10I	RCCGGY	3 cut(s)	141, 159, 812
Cfr13I	GGNCC	3 cut(s)	12, 346, 968
CseI	GACGC	2 cut(s)	244, 262
Csp6I	GTAC	5 cut(s)	226, 294, 375, 479, 892
CviAII	CATG	8 cut(s)	193, 709, 806, 857, 914, 965, 1484, 1791
CviQI	GTAC	5 cut(s)	226, 294, 375, 479, 892
DdeI	CTNAG	9 cut(s)	6, 456, 620, 1427, 1653, 1692, 1762, 1863, 1883
DpnI	GATC	6 cut(s)	98, 175, 570, 633, 762, 842
DpnII	GATC	6 cut(s)	96, 173, 568, 631, 760, 840
EaeI	YGGCCR	4 cut(s)	157, 810, 814, 1318
EagI	CGGCCG	1 cut(s)	157
Eam1104I	CTCTTC	1 cut(s)	1262
EarI	CTCTTC	1 cut(s)	1262
Ecl136II	GAGCTC	1 cut(s)	465
EclXI	CGGCCG	1 cut(s)	157
Eco130I	CCWWGG	2 cut(s)	708, 964
Eco24I	GRGCYC	1 cut(s)	467
Eco47I	GGWCC	3 cut(s)	12, 346, 968
Eco52I	CGGCCG	1 cut(s)	157
Eco53kI	GAGCTC	1 cut(s)	465
Eco57I	CTGAAG	1 cut(s)	815
EcoICRI	GAGCTC	1 cut(s)	465
EcoNI	CCTNNNNNAGG	1 cut(s)	899
EcoO109I	RGGNCCY	1 cut(s)	346
EcoRII	CCWGG	6 cut(s)	350, 1137, 1357, 1384, 1506, 1696
EcoT14I	CCWWGG	2 cut(s)	708, 964
EcoT38I	GRGCYC	1 cut(s)	467
ErhI	CCWWGG	2 cut(s)	708, 964
Esp3I	CGTCTC	1 cut(s)	123
FaeI	CATG	8 cut(s)	196, 712, 809, 860, 917, 968, 1487, 1794
FalI	AAGNNNNNCTT	2 cut(s)	1220, 1252
FaqI	GGGAC	3 cut(s)	265, 934, 1801
FatI	CATG	8 cut(s)	192, 708, 805, 856, 913, 964, 1483, 1790
FauI	CCCGC	1 cut(s)	1116
FauNDI	CATATG	1 cut(s)	1641
Fnu4HI	GCNGC	9 cut(s)	41, 55, 164, 239, 257, 260, 263, 1599, 1646
FokI	GGATG	5 cut(s)	700, 736, 917, 938, 1028
FriOI	GRGCYC	1 cut(s)	467
FseI	GGCCGGCC	1 cut(s)	816
Fsp4HI	GCNGC	9 cut(s)	41, 55, 164, 239, 257, 260, 263, 1599, 1646
FspBI	CTAG	2 cut(s)	372, 468
FspI	TGCGCA	1 cut(s)	327
GlaI	GCGC	3 cut(s)	58, 327, 1625
GluI	GCNGC	9 cut(s)	41, 55, 164, 239, 257, 260, 263, 1599, 1646
GsaI	CCCAGC	1 cut(s)	532
GsuI	CTGGAG	3 cut(s)	152, 1074, 1281
HaeIII	GGCC	4 cut(s)	159, 812, 816, 1320
HapII	CCGG	5 cut(s)	142, 160, 813, 1216, 1321
HgaI	GACGC	2 cut(s)	244, 262
HhaI	GCGC	3 cut(s)	59, 328, 1626
Hin1I	GRCGYC	2 cut(s)	254, 492
Hin1II	CATG	8 cut(s)	196, 712, 809, 860, 917, 968, 1487, 1794
Hin6I	GCGC	3 cut(s)	57, 326, 1624
HinP1I	GCGC	3 cut(s)	57, 326, 1624
HincII	GTYRAC	3 cut(s)	581, 617, 643
HindII	GTYRAC	3 cut(s)	581, 617, 643
HinfI	GANTC	4 cut(s)	662, 947, 1182, 1472
HpaII	CCGG	5 cut(s)	142, 160, 813, 1216, 1321
HphI	GGTGA	6 cut(s)	310, 497, 578, 1012, 1169, 1400
Hpy166II	GTNNAC	5 cut(s)	581, 617, 643, 1391, 1513
Hpy188I	TCNGA	6 cut(s)	76, 93, 760, 1258, 1315, 1656
Hpy188III	TCNNGA	8 cut(s)	169, 344, 971, 986, 1002, 1091, 1484, 1862
Hpy8I	GTNNAC	5 cut(s)	581, 617, 643, 1391, 1513
Hpy99I	CGWCG	3 cut(s)	80, 158, 238
HpyAV	CCTTC	5 cut(s)	32, 160, 790, 905, 1005
HpyCH4III	ACNGT	6 cut(s)	298, 323, 413, 578, 865, 1086
HpyCH4IV	ACGT	3 cut(s)	492, 583, 1192
HpyCH4V	TGCA	5 cut(s)	435, 1583, 1601, 1645, 1816
HpyF10VI	GCNNNNNNNGC	8 cut(s)	16, 142, 262, 914, 1307, 1580, 1604, 1879
HpyF3I	CTNAG	9 cut(s)	6, 456, 620, 1427, 1653, 1692, 1762, 1863, 1883
HpySE526I	ACGT	3 cut(s)	492, 583, 1192
Hsp92I	GRCGYC	2 cut(s)	254, 492
Hsp92II	CATG	8 cut(s)	196, 712, 809, 860, 917, 968, 1487, 1794
HspAI	GCGC	3 cut(s)	57, 326, 1624
KroI	GCCGGC	2 cut(s)	159, 812
KroNI	GCCGGC	2 cut(s)	161, 814
Kzo9I	GATC	6 cut(s)	96, 173, 568, 631, 760, 840
LmnI	GCTCC	6 cut(s)	24, 141, 171, 1004, 1720, 1748
Lsp1109I	GCAGC	5 cut(s)	27, 41, 274, 1585, 1657
LweI	GCATC	4 cut(s)	895, 916, 1413, 1440
MaeI	CTAG	2 cut(s)	372, 468
MaeII	ACGT	3 cut(s)	492, 583, 1192
MaeIII	GTNAC	8 cut(s)	298, 407, 413, 506, 659, 1018, 1204, 1756
MalI	GATC	6 cut(s)	98, 175, 570, 633, 762, 842
MboI	GATC	6 cut(s)	96, 173, 568, 631, 760, 840
MboII	GAAGA	4 cut(s)	1279, 1373, 1558, 1714
MfeI	CAATTG	2 cut(s)	130, 403
MflI	RGATCY	1 cut(s)	840
MhlI	GDGCHC	3 cut(s)	183, 467, 528
MlyI	GAGTC	2 cut(s)	656, 956
MmeI	TCCRAC	3 cut(s)	99, 1726, 1750
MroNI	GCCGGC	2 cut(s)	159, 812
MroXI	GAANNNNTTC	1 cut(s)	1377
MseI	TTAA	5 cut(s)	830, 921, 933, 1517, 1628
MslI	CAYNNNNRTG	2 cut(s)	1532, 1619
MspA1I	CMGCKG	2 cut(s)	10, 1766
MspI	CCGG	5 cut(s)	142, 160, 813, 1216, 1321
MspR9I	CCNGG	6 cut(s)	352, 1139, 1359, 1386, 1508, 1698
MunI	CAATTG	2 cut(s)	130, 403
MvaI	CCWGG	6 cut(s)	352, 1139, 1359, 1386, 1508, 1698
MvnI	CGCG	2 cut(s)	59, 238
MwoI	GCNNNNNNNGC	8 cut(s)	16, 142, 262, 914, 1307, 1580, 1604, 1879
NaeI	GCCGGC	2 cut(s)	161, 814
NcoI	CCATGG	2 cut(s)	708, 964
NdeI	CATATG	1 cut(s)	1641
NdeII	GATC	6 cut(s)	96, 173, 568, 631, 760, 840
NgoMIV	GCCGGC	2 cut(s)	159, 812
NlaIII	CATG	8 cut(s)	196, 712, 809, 860, 917, 968, 1487, 1794
NlaIV	GGNNCC	7 cut(s)	137, 167, 180, 348, 356, 706, 1846
NmuCI	GTSAC	5 cut(s)	298, 413, 659, 1018, 1204
NsbI	TGCGCA	1 cut(s)	327
NspI	RCATGY	1 cut(s)	809
PagI	TCATGA	1 cut(s)	1483
PciI	ACATGT	1 cut(s)	805
PdiI	GCCGGC	2 cut(s)	161, 814
PdmI	GAANNNNTTC	1 cut(s)	1377
PfeI	GAWTC	2 cut(s)	1182, 1472
PkrI	GCNGC	9 cut(s)	42, 56, 165, 240, 258, 261, 264, 1600, 1647
PleI	GAGTC	2 cut(s)	656, 955
PpsI	GAGTC	2 cut(s)	656, 955
Ppu21I	YACGTR	1 cut(s)	1193
PpuMI	RGGWCCY	1 cut(s)	346
PscI	ACATGT	1 cut(s)	805
PsiI	TTATAA	1 cut(s)	1281
Psp124BI	GAGCTC	1 cut(s)	467
Psp5II	RGGWCCY	1 cut(s)	346
Psp6I	CCWGG	6 cut(s)	350, 1137, 1357, 1384, 1506, 1696
PspFI	CCCAGC	1 cut(s)	528
PspGI	CCWGG	6 cut(s)	350, 1137, 1357, 1384, 1506, 1696
PspN4I	GGNNCC	7 cut(s)	137, 167, 180, 348, 356, 706, 1846
PspPI	GGNCC	3 cut(s)	12, 346, 968
PspPPI	RGGWCCY	1 cut(s)	346
PstNI	CAGNNNCTG	1 cut(s)	1007
PsuI	RGATCY	1 cut(s)	840
PvuII	CAGCTG	1 cut(s)	1766
RigI	GGCCGGCC	1 cut(s)	816
RsaI	GTAC	5 cut(s)	227, 295, 376, 480, 893
RsaNI	GTAC	5 cut(s)	226, 294, 375, 479, 892
RseI	CAYNNNNRTG	2 cut(s)	1532, 1619
SacI	GAGCTC	1 cut(s)	467
SaqAI	TTAA	5 cut(s)	830, 921, 933, 1517, 1628
SatI	GCNGC	9 cut(s)	41, 55, 164, 239, 257, 260, 263, 1599, 1646
Sau3AI	GATC	6 cut(s)	96, 173, 568, 631, 760, 840
Sau96I	GGNCC	3 cut(s)	12, 346, 968
SchI	GAGTC	2 cut(s)	656, 956
ScrFI	CCNGG	6 cut(s)	352, 1139, 1359, 1386, 1508, 1698
SduI	GDGCHC	3 cut(s)	183, 467, 528
SfaNI	GCATC	4 cut(s)	895, 916, 1413, 1440
SfcI	CTRYAG	1 cut(s)	1752
SgrAI	CRCCGGYG	1 cut(s)	141
SinI	GGWCC	3 cut(s)	12, 346, 968
SmiMI	CAYNNNNRTG	2 cut(s)	1532, 1619
SspI	AATATT	1 cut(s)	556
SspMI	CTAG	2 cut(s)	372, 468
SstI	GAGCTC	1 cut(s)	467
StyD4I	CCNGG	6 cut(s)	350, 1137, 1357, 1384, 1506, 1696
StyI	CCWWGG	2 cut(s)	708, 964
TaaI	ACNGT	6 cut(s)	298, 323, 413, 578, 865, 1086
TaiI	ACGT	3 cut(s)	495, 586, 1195
TaqI	TCGA	2 cut(s)	153, 1416
TatI	WGTACW	1 cut(s)	374
TauI	GCSGC	4 cut(s)	166, 241, 259, 262
TfiI	GAWTC	2 cut(s)	1182, 1472
Tru1I	TTAA	5 cut(s)	830, 921, 933, 1517, 1628
Tru9I	TTAA	5 cut(s)	830, 921, 933, 1517, 1628
TscAI	CASTG	4 cut(s)	279, 335, 628, 1089
TseFI	GTSAC	5 cut(s)	298, 413, 659, 1018, 1204
TseI	GCWGC	5 cut(s)	40, 54, 262, 1598, 1645
Tsp45I	GTSAC	5 cut(s)	298, 413, 659, 1018, 1204
TspDTI	ATGAA	5 cut(s)	456, 740, 902, 1460, 1535
TspRI	CASTG	4 cut(s)	279, 335, 628, 1089
VpaK11BI	GGWCC	3 cut(s)	12, 346, 968
XagI	CCTNNNNNAGG	1 cut(s)	899
XapI	RAATTY	2 cut(s)	1338, 1658
XceI	RCATGY	1 cut(s)	809
XmnI	GAANNNNTTC	1 cut(s)	1377
XspI	CTAG	2 cut(s)	372, 468
ZraI	GACGTC	1 cut(s)	493

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.