Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0008275

Physical Location & Seq

Genomic Coordinates Forward (+)

64635917 .. 64641220

Gene Structure 5304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG483300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGCTCCTCGGAGGTTGGTGGTCCTCCTCCTAATTTACTCCGTCCTACTCAATTTTTGTGGCGCGTTTGCTTCAACCGCCGATGATCAACGCCGTCCGATGATCCTTCCTCTCCATCTCTCCTCCCCCGACGACCACCGGCGAGCCTTCGACGGTCGGCGTCTCCAGAGATCGGAGCCGAACGCGCACATGAGGCTGCACGATGATCTCCTTACCAACGGGTACTACACGACGCGGCTTTGGATTGGGACACCGCCTCAGATGTTCGCTCTGATTGTGGATACGGGGAGTACTGTCACTTATGTGCCTTGCTCTGACTGTGAAGCCTGCGGTAACCATCAGGACCCTAGGTTTCAACCCGATTTATCTAGCACGTACCAACCTGTAAAGTGTAATATCAATTGCAACTGTGACGATAAAGGAAACCAATGCACTTATGAGAGGCGCTATGCTGAGCAGAGCTCCAGCAGTGGTGTGCTTGGTGAGGATGTCATTTCTTTTGGCAATGAGAGTGCACTTGTGCCCCAGCGTGCTGTTTTTGGTTGCGAGAATATTGAAACCGGTGATCTTTACAGCCAACGTGCCGATGGCATAATGGGCTTGGGCCGTGGTCAGCTTAGCGTCATGGACCAGCTTGTTGATAAGGGTGTTATTAGTGATTCATTTTCATTGTGTTATGGAGGAATGGGTGTAGGTGGGGGTGCTATGGTTCTAGGTGGGATTAAATCCCCCCCGGATATGGTGTTTACCCATTCTGATCGCTTTCGCAGTCCATATTACAATATTGAACTGAAGGAGATACATGTGGCTGGAAAGGCTTTGAAGTTAAACCCGAAGGTGTTTGATGAAAAGCATGGAACTGTCTTGGATAGTGGAACGACATATGCATACTTTCCAAAGGATGCTTTTATTGCATTTAAGGATGCTATTATGAAGGAAACTCATTTCCTCAAACAAGTCCATGGTCCTGACCCAAATTATAAAGATATCTGTTTTTCAGGTGCTGGAAGGGATGTCACCCAACTATCAAAAGTTTTTCCACAGGTTGATATGATATTCAGCAAGGGACAGAAGTTGTCACTGTCTCCCGAGAACTATTTGTTTCCGCATACGAAGGTTAGCGGGGCTTATTGCCTGGGAATTTTTGAAAATGGGGATTCAACCACTCTTTTAGGAGGAATTCTTGTACGTAATACCCTTGTGACATACGATCGAGCGGACAATAAGATTGGTTTTTGGAAAACCAATTGTTCTGAACTATGGAAGAGTTTAAATCATGAGAATGCTCAGGCCCCATCTTCTAACGACTGGAATATGAGTGGAGGGATTGCTCCTGACATCGCCCCAGCTGGATTGCCTCAAACTGATCTTCCAGGTGAACTTCAAATAGTGCTGATAAGTTTCGATATGATGCTCAACATCAGCAACTCTATGAAACCCAACTTCACAGAACTCGCAGAGTCTATTGCCCATGAGCTGGAAGTCGATATTTCTCAGGTTCACTTGAGGAACTACACTATTTCAGGAAATGATTTACTCATTAAGTGGACTATCGTACCTGATGAATCTGCCAATAGCTTTACTACTACCAAAGCAATGAACATAATTCGGCGCTTAAGGGAACATCAGATGCAGCTTCCCCATAAATTTGGGAGTTATCAGCTGGTCAAATTGAAAGTTGAACCTCAAATAAAGCGGTCATGGTGGGAGCAACATTCTTGGATGGTGGCAGTTGGAGTTTCAGTTGCCTCGGTTCTTGGACTATTAGCATTAGGGACATGGTTGGTTTGGAGATACAGATCGCGACAGGGCATGACTTATGAGCCTGTTGATGGCGTTGTTGGTGCGGTTGTTGCAGAGCAAGAACTTCAGCCCCTTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

627

Amino Acids

69.76

Weight (kDa)

6.03

Isoelectric Point (pI)

40.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	76 - 240	1.3e-36	Xylanase inhibitor N-terminal
Asp	PF00026	76 - 412	1.5e-33	Eukaryotic aspartyl protease
TAXi_C	PF14541	260 - 412	7.9e-27	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43100 AT5G43100
fragaria_vesca	FvH4_2g33420
malus_domestica	MD08G1089200.v1.1 MD08G1089400.v1.1 MD15G1074000.v1.1
prunus_persica	Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1
pyrus_communis	pycom08g07250 pycom08g07270 pycom15g06910
rosa_chinensis	RchiOBHm_Chr6g0309111
rosa_laevigata	RLG00000010588
rosa_roxburghii	Rroxscaffold_7G00159640
rosa_rugosa	Rorug06G0369800
rosa_samantha	Rh6AG482600 Rh6BG491600 Rh6BG491700 Rh6CG496400 Rh6DG483300
rosa_wichuraiana	Rw6G042020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	981
AccB7I	CCANNNNNTGG	1 cut(s)	1477
AccBSI	CCGCTC	1 cut(s)	1217
AccII	CGCG	4 cut(s)	65, 185, 235, 1804
AciI	CCGC	9 cut(s)	78, 235, 254, 330, 1106, 1122, 1217, 1696, 1847
AclWI	GGATC	1 cut(s)	97
AcsI	RAATTY	3 cut(s)	1140, 1179, 1646
AcuI	CTGAAG	2 cut(s)	812, 1853
AcyI	GRCGYC	1 cut(s)	160
AfaI	GTAC	5 cut(s)	224, 292, 377, 1188, 1557
AfiI	CCNNNNNNNGG	4 cut(s)	172, 739, 1477, 1832
AflII	CTTAAG	1 cut(s)	1615
AflIII	ACRYGT	1 cut(s)	802
AgeI	ACCGGT	1 cut(s)	560
AjnI	CCWGG	2 cut(s)	1134, 1372
AleI	CACNNNNGTG	1 cut(s)	302
AluBI	AGCT	8 cut(s)	462, 616, 634, 1349, 1477, 1578, 1636, 1663
AluI	AGCT	8 cut(s)	462, 616, 634, 1349, 1477, 1578, 1636, 1663
Alw21I	GWGCWC	2 cut(s)	464, 517
Alw26I	GTCTC	2 cut(s)	167, 1089
Alw44I	GTGCAC	1 cut(s)	513
AlwI	GGATC	1 cut(s)	97
AlwNI	CAGNNNCTG	1 cut(s)	1004
Ama87I	CYCGRG	1 cut(s)	1088
AoxI	GGCC	2 cut(s)	604, 1290
ApaLI	GTGCAC	1 cut(s)	513
ApeKI	GCWGC	2 cut(s)	196, 1633
ApoI	RAATTY	3 cut(s)	1140, 1179, 1646
AsiGI	ACCGGT	1 cut(s)	560
AspA2I	CCTAGG	1 cut(s)	347
AspLEI	GCGC	4 cut(s)	65, 187, 447, 1614
AspS9I	GGNCC	6 cut(s)	22, 343, 604, 628, 965, 1291
AsuC2I	CCSGG	1 cut(s)	734
AsuHPI	GGTGA	4 cut(s)	494, 575, 1009, 1388
AvaI	CYCGRG	1 cut(s)	1088
AvaII	GGWCC	4 cut(s)	22, 343, 628, 965
AvrII	CCTAGG	1 cut(s)	347
BaeGI	GKGCMC	2 cut(s)	517, 525
BaeI	ACNNNNGTAYC	2 cut(s)	1539, 1572
BanII	GRGCYC	1 cut(s)	464
Bbv12I	GWGCWC	2 cut(s)	464, 517
BbvI	GCAGC	2 cut(s)	183, 1645
BccI	CCATC	6 cut(s)	123, 345, 581, 1303, 1717, 1826
BceAI	ACGGC	2 cut(s)	78, 591
BciT130I	CCWGG	2 cut(s)	1136, 1374
BciVI	GTATCC	1 cut(s)	274
BclI	TGATCA	1 cut(s)	85
BcnI	CCSGG	1 cut(s)	734
BcoDI	GTCTC	2 cut(s)	167, 1089
BfaI	CTAG	3 cut(s)	348, 369, 713
BfoI	RGCGCY	2 cut(s)	448, 1615
BfrI	CTTAAG	1 cut(s)	1615
BfuI	GTATCC	1 cut(s)	274
BisI	GCNGC	3 cut(s)	197, 236, 1634
BlnI	CCTAGG	1 cut(s)	347
BlpI	GCTNAGC	2 cut(s)	453, 617
BlsI	GCNGC	3 cut(s)	198, 237, 1635
BmcAI	AGTACT	1 cut(s)	292
Bme1390I	CCNGG	3 cut(s)	734, 1136, 1374
Bme18I	GGWCC	4 cut(s)	22, 343, 628, 965
BmeT110I	CYCGRG	1 cut(s)	1088
BmgT120I	GGNCC	6 cut(s)	22, 343, 604, 628, 965, 1291
BmiI	GGNNCC	4 cut(s)	6, 177, 345, 1293
BmrFI	CCNGG	3 cut(s)	734, 1136, 1374
BmsI	GCATC	4 cut(s)	892, 913, 1401, 1620
BplI	GAGNNNNNCTC	2 cut(s)	446, 478
BpmI	CTGGAG	2 cut(s)	149, 448
Bpu10I	CCTNAGC	1 cut(s)	1287
Bpu1102I	GCTNAGC	2 cut(s)	453, 617
BpuEI	CTTGAG	1 cut(s)	1525
BpuMI	CCSGG	1 cut(s)	734
BsaAI	YACGTR	2 cut(s)	375, 1190
BsaBI	GATNNNNATC	1 cut(s)	1798
BsaHI	GRCGYC	1 cut(s)	160
BsaJI	CCNNGG	7 cut(s)	8, 347, 607, 732, 961, 1135, 1749
BsaWI	WCCGGW	1 cut(s)	560
BsaXI	ACNNNNNCTCC	2 cut(s)	1728, 1758
Bsc4I	CCNNNNNNNGG	4 cut(s)	172, 739, 1477, 1832
Bse118I	RCCGGY	2 cut(s)	138, 560
Bse1I	ACTGG	1 cut(s)	1313
Bse3DI	GCAATG	2 cut(s)	511, 1602
Bse8I	GATNNNNATC	1 cut(s)	1798
BseBI	CCWGG	2 cut(s)	1136, 1374
BseDI	CCNNGG	7 cut(s)	8, 347, 607, 732, 961, 1135, 1749
BseGI	GGATG	5 cut(s)	493, 907, 928, 1018, 1728
BseJI	GATNNNNATC	1 cut(s)	1798
BseLI	CCNNNNNNNGG	4 cut(s)	172, 739, 1477, 1832
BseMI	GCAATG	2 cut(s)	511, 1602
BseMII	CTCAG	4 cut(s)	272, 444, 1301, 1508
BseNI	ACTGG	1 cut(s)	1313
BseRI	GAGGAG	2 cut(s)	17, 112
BseSI	GKGCMC	2 cut(s)	517, 525
BseXI	GCAGC	2 cut(s)	183, 1645
BseYI	CCCAGC	2 cut(s)	525, 1345
BsgI	GTGCAG	1 cut(s)	182
Bsh1236I	CGCG	4 cut(s)	65, 185, 235, 1804
Bsh1285I	CGRYCG	2 cut(s)	157, 1213
BshFI	GGCC	2 cut(s)	606, 1292
BshTI	ACCGGT	1 cut(s)	560
BsiEI	CGRYCG	2 cut(s)	157, 1213
BsiHKAI	GWGCWC	2 cut(s)	464, 517
BsiHKCI	CYCGRG	1 cut(s)	1088
BsiSI	CCGG	3 cut(s)	139, 561, 734
BslFI	GGGAC	3 cut(s)	262, 1080, 1789
BslI	CCNNNNNNNGG	4 cut(s)	172, 739, 1477, 1832
BsmAI	GTCTC	2 cut(s)	167, 1089
BsmBI	CGTCTC	1 cut(s)	167
BsmFI	GGGAC	3 cut(s)	262, 1080, 1789
BsmI	GAATGC	1 cut(s)	1288
BsnI	GGCC	2 cut(s)	606, 1292
BsoBI	CYCGRG	1 cut(s)	1088
Bsp1286I	GDGCHC	3 cut(s)	464, 517, 525
Bsp143I	GATC	9 cut(s)	85, 102, 170, 205, 565, 757, 1210, 1366, 1799
Bsp1720I	GCTNAGC	2 cut(s)	453, 617
Bsp19I	CCATGG	1 cut(s)	961
Bsp68I	TCGCGA	1 cut(s)	1804
BspACI	CCGC	9 cut(s)	78, 235, 254, 330, 1106, 1122, 1217, 1696, 1847
BspANI	GGCC	2 cut(s)	606, 1292
BspCNI	CTCAG	4 cut(s)	271, 445, 1300, 1507
BspFNI	CGCG	4 cut(s)	65, 185, 235, 1804
BspHI	TCATGA	1 cut(s)	1276
BspLI	GGNNCC	4 cut(s)	6, 177, 345, 1293
BspPI	GGATC	1 cut(s)	97
BspTI	CTTAAG	1 cut(s)	1615
BsrBI	CCGCTC	1 cut(s)	1217
BsrDI	GCAATG	2 cut(s)	511, 1602
BsrFI	RCCGGY	2 cut(s)	138, 560
BsrI	ACTGG	1 cut(s)	1313
BssAI	RCCGGY	2 cut(s)	138, 560
BssECI	CCNNGG	7 cut(s)	8, 347, 607, 732, 961, 1135, 1749
BssMI	GATC	9 cut(s)	85, 102, 170, 205, 565, 757, 1210, 1366, 1799
BssNI	GRCGYC	1 cut(s)	160
BssT1I	CCWWGG	2 cut(s)	347, 961
Bst2UI	CCWGG	2 cut(s)	1136, 1374
Bst4CI	ACNGT	6 cut(s)	155, 295, 320, 410, 862, 1083
Bst6I	CTCTTC	1 cut(s)	1259
BstACI	GRCGYC	1 cut(s)	160
BstAFI	CTTAAG	1 cut(s)	1615
BstBAI	YACGTR	2 cut(s)	375, 1190
BstC8I	GCNNGC	3 cut(s)	144, 328, 531
BstDEI	CTNAG	5 cut(s)	258, 453, 617, 1287, 1494
BstDSI	CCRYGG	2 cut(s)	607, 961
BstEII	GGTNACC	1 cut(s)	332
BstF5I	GGATG	5 cut(s)	493, 907, 928, 1018, 1728
BstFNI	CGCG	4 cut(s)	65, 185, 235, 1804
BstH2I	RGCGCY	2 cut(s)	448, 1615
BstHHI	GCGC	4 cut(s)	65, 187, 447, 1614
BstKTI	GATC	9 cut(s)	88, 105, 173, 208, 568, 760, 1213, 1369, 1802
BstMAI	GTCTC	2 cut(s)	167, 1089
BstMBI	GATC	9 cut(s)	85, 102, 170, 205, 565, 757, 1210, 1366, 1799
BstMCI	CGRYCG	2 cut(s)	157, 1213
BstMWI	GCNNNNNNNGC	7 cut(s)	77, 184, 193, 597, 815, 911, 1853
BstNI	CCWGG	2 cut(s)	1136, 1374
BstNSI	RCATGY	1 cut(s)	806
BstPI	GGTNACC	1 cut(s)	332
BstSCI	CCNGG	3 cut(s)	732, 1134, 1372
BstSLI	GKGCMC	2 cut(s)	517, 525
BstSNI	TACGTA	1 cut(s)	1190
BstUI	CGCG	4 cut(s)	65, 185, 235, 1804
BstV1I	GCAGC	2 cut(s)	183, 1645
BstXI	CCANNNNNNTGG	1 cut(s)	1649
BsuI	GTATCC	1 cut(s)	274
BsuRI	GGCC	2 cut(s)	606, 1292
BtgI	CCRYGG	2 cut(s)	607, 961
BtgZI	GCGATG	1 cut(s)	1324
BtsCI	GGATG	5 cut(s)	493, 907, 928, 1018, 1728
BtsI	GCAGTG	1 cut(s)	475
BtsIMutI	CAGTG	2 cut(s)	475, 1079
BtuMI	TCGCGA	1 cut(s)	1804
Cac8I	GCNNGC	3 cut(s)	144, 328, 531
CaiI	CAGNNNCTG	1 cut(s)	1004
CciI	TCATGA	1 cut(s)	1276
CfoI	GCGC	4 cut(s)	65, 187, 447, 1614
Cfr10I	RCCGGY	2 cut(s)	138, 560
Cfr13I	GGNCC	6 cut(s)	22, 343, 604, 628, 965, 1291
CseI	GACGC	3 cut(s)	149, 241, 610
Csp6I	GTAC	5 cut(s)	223, 291, 376, 1187, 1556
CspAI	ACCGGT	1 cut(s)	560
CspCI	CAANNNNNGTGG	2 cut(s)	40, 75
CviQI	GTAC	5 cut(s)	223, 291, 376, 1187, 1556
DdeI	CTNAG	5 cut(s)	258, 453, 617, 1287, 1494
DpnI	GATC	9 cut(s)	87, 104, 172, 207, 567, 759, 1212, 1368, 1801
DpnII	GATC	9 cut(s)	85, 102, 170, 205, 565, 757, 1210, 1366, 1799
DraI	TTTAAA	1 cut(s)	1272
Eam1104I	CTCTTC	1 cut(s)	1259
EarI	CTCTTC	1 cut(s)	1259
Ecl136II	GAGCTC	1 cut(s)	462
Eco105I	TACGTA	1 cut(s)	1190
Eco130I	CCWWGG	2 cut(s)	347, 961
Eco24I	GRGCYC	1 cut(s)	464
Eco32I	GATATC	1 cut(s)	988
Eco47I	GGWCC	4 cut(s)	22, 343, 628, 965
Eco53kI	GAGCTC	1 cut(s)	462
Eco57I	CTGAAG	2 cut(s)	812, 1853
Eco88I	CYCGRG	1 cut(s)	1088
Eco91I	GGTNACC	1 cut(s)	332
EcoICRI	GAGCTC	1 cut(s)	462
EcoO109I	RGGNCCY	2 cut(s)	343, 1291
EcoO65I	GGTNACC	1 cut(s)	332
EcoRI	GAATTC	1 cut(s)	1179
EcoRII	CCWGG	2 cut(s)	1134, 1372
EcoRV	GATATC	1 cut(s)	988
EcoT14I	CCWWGG	2 cut(s)	347, 961
EcoT22I	ATGCAT	1 cut(s)	889
EcoT38I	GRGCYC	1 cut(s)	464
ErhI	CCWWGG	2 cut(s)	347, 961
Esp3I	CGTCTC	1 cut(s)	167
FaqI	GGGAC	3 cut(s)	262, 1080, 1789
FauI	CCCGC	1 cut(s)	1115
FauNDI	CATATG	1 cut(s)	883
FbaI	TGATCA	1 cut(s)	85
Fnu4HI	GCNGC	3 cut(s)	197, 236, 1634
FokI	GGATG	5 cut(s)	500, 914, 935, 1025, 1735
FriOI	GRGCYC	1 cut(s)	464
Fsp4HI	GCNGC	3 cut(s)	197, 236, 1634
FspBI	CTAG	3 cut(s)	348, 369, 713
GlaI	GCGC	4 cut(s)	64, 186, 446, 1613
GluI	GCNGC	3 cut(s)	197, 236, 1634
GsaI	CCCAGC	2 cut(s)	529, 1349
GsuI	CTGGAG	2 cut(s)	149, 448
HaeII	RGCGCY	2 cut(s)	448, 1615
HaeIII	GGCC	2 cut(s)	606, 1292
HapII	CCGG	3 cut(s)	139, 561, 734
HgaI	GACGC	3 cut(s)	149, 241, 610
HhaI	GCGC	4 cut(s)	65, 187, 447, 1614
Hin1I	GRCGYC	1 cut(s)	160
Hin6I	GCGC	4 cut(s)	63, 185, 445, 1612
HinP1I	GCGC	4 cut(s)	63, 185, 445, 1612
HinfI	GANTC	4 cut(s)	659, 1157, 1460, 1565
HpaII	CCGG	3 cut(s)	139, 561, 734
HphI	GGTGA	4 cut(s)	494, 575, 1009, 1388
Hpy166II	GTNNAC	5 cut(s)	515, 747, 1379, 1501, 1548
Hpy188I	TCNGA	9 cut(s)	12, 99, 175, 261, 273, 316, 757, 1255, 1629
Hpy188III	TCNNGA	8 cut(s)	166, 341, 968, 1088, 1277, 1334, 1524, 1803
Hpy8I	GTNNAC	5 cut(s)	515, 747, 1379, 1501, 1548
Hpy99I	CGWCG	3 cut(s)	134, 155, 235
HpyAV	CCTTC	7 cut(s)	116, 157, 787, 829, 928, 1002, 1108
HpyCH4III	ACNGT	6 cut(s)	155, 295, 320, 410, 862, 1083
HpyCH4IV	ACGT	3 cut(s)	374, 580, 1189
HpyCH4V	TGCA	8 cut(s)	199, 405, 432, 515, 887, 914, 1633, 1856
HpyF10VI	GCNNNNNNNGC	7 cut(s)	77, 184, 193, 597, 815, 911, 1853
HpyF3I	CTNAG	5 cut(s)	258, 453, 617, 1287, 1494
HpySE526I	ACGT	3 cut(s)	374, 580, 1189
Hsp92I	GRCGYC	1 cut(s)	160
HspAI	GCGC	4 cut(s)	63, 185, 445, 1612
Ksp22I	TGATCA	1 cut(s)	85
Kzo9I	GATC	9 cut(s)	85, 102, 170, 205, 565, 757, 1210, 1366, 1799
LmnI	GCTCC	5 cut(s)	10, 175, 467, 1336, 1708
Lsp1109I	GCAGC	2 cut(s)	183, 1645
LweI	GCATC	4 cut(s)	892, 913, 1401, 1620
MaeI	CTAG	3 cut(s)	348, 369, 713
MaeII	ACGT	3 cut(s)	374, 580, 1189
MaeIII	GTNAC	6 cut(s)	295, 332, 410, 1015, 1077, 1201
MalI	GATC	9 cut(s)	87, 104, 172, 207, 567, 759, 1212, 1368, 1801
MbiI	CCGCTC	1 cut(s)	1217
MboI	GATC	9 cut(s)	85, 102, 170, 205, 565, 757, 1210, 1366, 1799
MboII	GAAGA	3 cut(s)	1276, 1290, 1361
MfeI	CAATTG	2 cut(s)	400, 1246
MhlI	GDGCHC	3 cut(s)	464, 517, 525
MlyI	GAGTC	1 cut(s)	1469
MmeI	TCCRAC	1 cut(s)	1714
Mph1103I	ATGCAT	1 cut(s)	889
MseI	TTAA	7 cut(s)	723, 827, 918, 1271, 1542, 1616, 1878
MslI	CAYNNNNRTG	2 cut(s)	302, 1281
MspA1I	CMGCKG	2 cut(s)	1349, 1663
MspCI	CTTAAG	1 cut(s)	1615
MspI	CCGG	3 cut(s)	139, 561, 734
MspR9I	CCNGG	3 cut(s)	734, 1136, 1374
MunI	CAATTG	2 cut(s)	400, 1246
Mva1269I	GAATGC	1 cut(s)	1288
MvaI	CCWGG	2 cut(s)	1136, 1374
MvnI	CGCG	4 cut(s)	65, 185, 235, 1804
MwoI	GCNNNNNNNGC	7 cut(s)	77, 184, 193, 597, 815, 911, 1853
NciI	CCSGG	1 cut(s)	734
NcoI	CCATGG	1 cut(s)	961
NdeI	CATATG	1 cut(s)	883
NdeII	GATC	9 cut(s)	85, 102, 170, 205, 565, 757, 1210, 1366, 1799
NlaIV	GGNNCC	4 cut(s)	6, 177, 345, 1293
NmuCI	GTSAC	5 cut(s)	295, 410, 1015, 1077, 1201
NruI	TCGCGA	1 cut(s)	1804
NsiI	ATGCAT	1 cut(s)	889
NspI	RCATGY	1 cut(s)	806
OliI	CACNNNNGTG	1 cut(s)	302
PagI	TCATGA	1 cut(s)	1276
PciI	ACATGT	1 cut(s)	802
PctI	GAATGC	1 cut(s)	1288
PfeI	GAWTC	3 cut(s)	659, 1157, 1565
PflMI	CCANNNNNTGG	1 cut(s)	1477
PinAI	ACCGGT	1 cut(s)	560
PkrI	GCNGC	3 cut(s)	198, 237, 1635
Ple19I	CGATCG	1 cut(s)	1213
PleI	GAGTC	1 cut(s)	1468
PpsI	GAGTC	1 cut(s)	1468
Ppu21I	YACGTR	2 cut(s)	375, 1190
PpuMI	RGGWCCY	1 cut(s)	343
PscI	ACATGT	1 cut(s)	802
PsiI	TTATAA	1 cut(s)	981
Psp124BI	GAGCTC	1 cut(s)	464
Psp5II	RGGWCCY	1 cut(s)	343
Psp6I	CCWGG	2 cut(s)	1134, 1372
PspEI	GGTNACC	1 cut(s)	332
PspFI	CCCAGC	2 cut(s)	525, 1345
PspGI	CCWGG	2 cut(s)	1134, 1372
PspN4I	GGNNCC	4 cut(s)	6, 177, 345, 1293
PspPI	GGNCC	6 cut(s)	22, 343, 604, 628, 965, 1291
PspPPI	RGGWCCY	1 cut(s)	343
PstNI	CAGNNNCTG	1 cut(s)	1004
PvuI	CGATCG	1 cut(s)	1213
PvuII	CAGCTG	2 cut(s)	1349, 1663
RruI	TCGCGA	1 cut(s)	1804
RsaI	GTAC	5 cut(s)	224, 292, 377, 1188, 1557
RsaNI	GTAC	5 cut(s)	223, 291, 376, 1187, 1556
RseI	CAYNNNNRTG	2 cut(s)	302, 1281
SacI	GAGCTC	1 cut(s)	464
SaqAI	TTAA	7 cut(s)	723, 827, 918, 1271, 1542, 1616, 1878
SatI	GCNGC	3 cut(s)	197, 236, 1634
Sau3AI	GATC	9 cut(s)	85, 102, 170, 205, 565, 757, 1210, 1366, 1799
Sau96I	GGNCC	6 cut(s)	22, 343, 604, 628, 965, 1291
ScaI	AGTACT	1 cut(s)	292
SchI	GAGTC	1 cut(s)	1469
ScrFI	CCNGG	3 cut(s)	734, 1136, 1374
SduI	GDGCHC	3 cut(s)	464, 517, 525
SfaNI	GCATC	4 cut(s)	892, 913, 1401, 1620
SgrAI	CRCCGGYG	1 cut(s)	138
SinI	GGWCC	4 cut(s)	22, 343, 628, 965
SmiMI	CAYNNNNRTG	2 cut(s)	302, 1281
SmlI	CTYRAG	2 cut(s)	1504, 1615
SmoI	CTYRAG	2 cut(s)	1504, 1615
SnaBI	TACGTA	1 cut(s)	1190
SsiI	CCGC	9 cut(s)	78, 235, 254, 330, 1106, 1122, 1217, 1696, 1847
SspI	AATATT	2 cut(s)	553, 784
SspMI	CTAG	3 cut(s)	348, 369, 713
SstI	GAGCTC	1 cut(s)	464
StyD4I	CCNGG	3 cut(s)	732, 1134, 1372
StyI	CCWWGG	2 cut(s)	347, 961
TaaI	ACNGT	6 cut(s)	155, 295, 320, 410, 862, 1083
TaiI	ACGT	3 cut(s)	377, 583, 1192
TaqI	TCGA	4 cut(s)	150, 1213, 1404, 1485
TatI	WGTACW	1 cut(s)	290
TauI	GCSGC	1 cut(s)	238
TfiI	GAWTC	3 cut(s)	659, 1157, 1565
Tru1I	TTAA	7 cut(s)	723, 827, 918, 1271, 1542, 1616, 1878
Tru9I	TTAA	7 cut(s)	723, 827, 918, 1271, 1542, 1616, 1878
TscAI	CASTG	2 cut(s)	475, 1086
TseFI	GTSAC	5 cut(s)	295, 410, 1015, 1077, 1201
TseI	GCWGC	2 cut(s)	196, 1633
Tsp45I	GTSAC	5 cut(s)	295, 410, 1015, 1077, 1201
TspDTI	ATGAA	7 cut(s)	651, 657, 861, 947, 1448, 1578, 1613
TspGWI	ACGGA	1 cut(s)	31
TspRI	CASTG	2 cut(s)	475, 1086
Van91I	CCANNNNNTGG	1 cut(s)	1477
Vha464I	CTTAAG	1 cut(s)	1615
VneI	GTGCAC	1 cut(s)	513
VpaK11BI	GGWCC	4 cut(s)	22, 343, 628, 965
XapI	RAATTY	3 cut(s)	1140, 1179, 1646
XceI	RCATGY	1 cut(s)	806
XcmI	CCANNNNNNNNNTGG	1 cut(s)	584
XmaJI	CCTAGG	1 cut(s)	347
XspI	CTAG	3 cut(s)	348, 369, 713
ZrmI	AGTACT	1 cut(s)	292
Zsp2I	ATGCAT	1 cut(s)	889

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.