Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0008275

Physical Location & Seq

Genomic Coordinates Reverse (-)

2770710 .. 2775314

Gene Structure 4605 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00159640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGCTCCTCGGAGGTTGGTGGTCCTCCTTCTAATTTACTCCGTCCTACTCAATTTTTGTGGCGCGTTTGCTTCAACCGCCGATGATCAACGCCGTCCGATGATCCTTCCTCTCCATCTCTCCTCCCCCGACGACGCTCGCCACCACCGGCGAGCCTTCGACGGTCGGCGTCTCCAGAGATCGGAGCCGAACGCGCACATGAGGCTCCACGATGATCTCCTTACCAACGGGTACTACACGACGCGGCTGTGGATCGGGACACCGCCTCAGATGTTCGCTCTGATTGTGGATACGGGGAGTACTGTCACTTATGTGCCTTGCTCTGACTGTGAAGCCTGCGGTAACCATCAGGACCCTAGGTTTCAACCCGATTTATCTAGCACGTACCAACCTGTAAAGTGTAATATCAATTGCAACTGTGACGATAAAGGAAACCAATGCACTTATGAGAGGCGCTATGCTGAGCAGAGCTCCAGCAGTGGTGTGCTTGGTGAGGACGTCATTTCTTTTGGCAATGAGAGTGCACTAGTGCCCCAGCGTGCTGTTTTTGGTTGCGAGAATATTGAAACCGGTGATCTTTACAGCCAACGTGCCGATGGCATAATGGGCTTGGGCCGTGGTCAGCTTAGCGTCATGGACCAGCTTGTTGATAAGGGTGTTATTAGTGATTCATTTTCATTGTGTTATGGAGGAATGGGTGTAGGTGGGGGTGCTATGTTTTGGGGCAACAGTCCATATTACAATATTGAACTGAAGGAGATACATGTGGCTGGAAAGGCTTTGAAGTTAAACCCGAAGGTGTTTGATGAAAAGCATGGAACTGTCTTGGATAGTGGAACGACATATGCATACTTTCCAAAGGATGCTTTTATTGCATTTAAGGATGCTATTATGAAGGAAACTCATTTCCTCAAACAAGTCCATGGTCCTGACCCCAATTATAAAGATATCTGTTTTTCAGGTGCTGGAAGGGATGTCACCCAACTATCAAAAGTTTTTCCACAGGTTGATATGATATTCAGCAAGGGACAGAAGTTTTCACTGTCTCCCGAGAACTATTTGTTTCCGAGTTTAAATCATGAGAAAGCTCAGGCCCCATCTTCTAACGACTGGAATATGAGTGGAGAGATTGCTCCTGACATCGCCCCAGCTGGATTGCCTCAAACTGATCTTCCAGGTGAACTTCAAATAGGGCAGATAAGTTTCGATATGATGCTCAACATCAGCAACTCTATGAAACCCAACTTCACAGAACTCGCAGAGTCTATTGCCCATGAGCTGCAAGTCGATATTTCTCAGGTTCACTTGAGGAACTACACTATTTCAGGAAATGATTTACTCATTAAGTGGACTATCGTACCTGATGAATCTGCCAATAGCTTTACTACTACCAAAGCAATGAACATAATTCGGCGCGTAAGGGAACATCAGATGCAGCTTCCCCATAAATTTGGGAGTTATCAGCTGGTCAAATTGAAAGTTGAACCTCAAATAAAGCGGTCATGGTGGGAGCAACATTCTTGGATGGTGGCAGTTGGAGTTTCAGTTGCCTCGGTTCTTGGACTATTAGCATTAGGGACATGGTTGGTTTGGAGATACAGATCGCGACAGGGCATGACTTATGAGCCTGTTGATGGCGTTGTTGGTGCGGTTGTTGCAGAGCAAGAACTTCAGCCCCTTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

561

Amino Acids

62.58

Weight (kDa)

5.98

Isoelectric Point (pI)

42.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	79 - 243	3.1e-36	Xylanase inhibitor N-terminal
Asp	PF00026	79 - 361	1.2e-20	Eukaryotic aspartyl protease
TAXi_C	PF14541	247 - 355	1.9e-17	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43100 AT5G43100
fragaria_vesca	FvH4_2g33420
malus_domestica	MD08G1089200.v1.1 MD08G1089400.v1.1 MD15G1074000.v1.1
prunus_persica	Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1
pyrus_communis	pycom08g07250 pycom08g07270 pycom15g06910
rosa_chinensis	RchiOBHm_Chr6g0309111
rosa_laevigata	RLG00000010588
rosa_roxburghii	Rroxscaffold_7G00159640
rosa_rugosa	Rorug06G0369800
rosa_samantha	Rh6AG482600 Rh6BG491600 Rh6BG491700 Rh6CG496400 Rh6DG483300
rosa_wichuraiana	Rw6G042020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	942
AatII	GACGTC	1 cut(s)	501
AccII	CGCG	5 cut(s)	65, 194, 244, 1416, 1606
AciI	CCGC	6 cut(s)	78, 244, 263, 339, 1498, 1649
AclWI	GGATC	2 cut(s)	97, 260
AcsI	RAATTY	1 cut(s)	1448
AcuI	CTGAAG	2 cut(s)	773, 1655
AcyI	GRCGYC	2 cut(s)	169, 498
AfaI	GTAC	4 cut(s)	233, 301, 386, 1359
AfiI	CCNNNNNNNGG	2 cut(s)	181, 1634
AflIII	ACRYGT	1 cut(s)	763
AgeI	ACCGGT	1 cut(s)	569
AgsI	TTSAA	8 cut(s)	75, 365, 566, 749, 784, 1187, 1477, 1484
AhlI	ACTAGT	1 cut(s)	526
AjnI	CCWGG	1 cut(s)	1174
AleI	CACNNNNGTG	1 cut(s)	311
AluBI	AGCT	9 cut(s)	471, 625, 643, 1088, 1151, 1279, 1380, 1438, 1465
AluI	AGCT	9 cut(s)	471, 625, 643, 1088, 1151, 1279, 1380, 1438, 1465
Alw21I	GWGCWC	2 cut(s)	473, 526
Alw26I	GTCTC	2 cut(s)	176, 1050
Alw44I	GTGCAC	1 cut(s)	522
AlwI	GGATC	2 cut(s)	97, 260
AlwNI	CAGNNNCTG	1 cut(s)	965
Ama87I	CYCGRG	1 cut(s)	1049
AoxI	GGCC	2 cut(s)	613, 1092
ApaLI	GTGCAC	1 cut(s)	522
ApeKI	GCWGC	2 cut(s)	1279, 1435
ApoI	RAATTY	1 cut(s)	1448
AsiGI	ACCGGT	1 cut(s)	569
AspA2I	CCTAGG	1 cut(s)	356
AspLEI	GCGC	4 cut(s)	65, 196, 456, 1416
AspS9I	GGNCC	6 cut(s)	22, 352, 613, 637, 926, 1093
AsuHPI	GGTGA	4 cut(s)	503, 584, 970, 1190
AvaI	CYCGRG	1 cut(s)	1049
AvaII	GGWCC	4 cut(s)	22, 352, 637, 926
AvrII	CCTAGG	1 cut(s)	356
BaeGI	GKGCMC	2 cut(s)	526, 534
BaeI	ACNNNNGTAYC	2 cut(s)	1341, 1374
BanII	GRGCYC	1 cut(s)	473
Bbv12I	GWGCWC	2 cut(s)	473, 526
BbvI	GCAGC	2 cut(s)	1266, 1447
BccI	CCATC	6 cut(s)	123, 354, 590, 1105, 1519, 1628
BceAI	ACGGC	2 cut(s)	78, 600
BciT130I	CCWGG	1 cut(s)	1176
BciVI	GTATCC	1 cut(s)	283
BclI	TGATCA	1 cut(s)	85
BcoDI	GTCTC	2 cut(s)	176, 1050
BcuI	ACTAGT	1 cut(s)	526
BfaI	CTAG	3 cut(s)	357, 378, 527
BfoI	RGCGCY	1 cut(s)	457
BfuI	GTATCC	1 cut(s)	283
BisI	GCNGC	3 cut(s)	245, 1280, 1436
BlnI	CCTAGG	1 cut(s)	356
BlpI	GCTNAGC	2 cut(s)	462, 626
BlsI	GCNGC	3 cut(s)	246, 1281, 1437
BmcAI	AGTACT	1 cut(s)	301
Bme1390I	CCNGG	1 cut(s)	1176
Bme18I	GGWCC	4 cut(s)	22, 352, 637, 926
BmeT110I	CYCGRG	1 cut(s)	1049
BmgT120I	GGNCC	6 cut(s)	22, 352, 613, 637, 926, 1093
BmiI	GGNNCC	5 cut(s)	6, 186, 206, 354, 1095
BmrFI	CCNGG	1 cut(s)	1176
BmsI	GCATC	4 cut(s)	853, 874, 1203, 1422
BplI	GAGNNNNNCTC	2 cut(s)	455, 487
BpmI	CTGGAG	2 cut(s)	158, 457
Bpu10I	CCTNAGC	1 cut(s)	1089
Bpu1102I	GCTNAGC	2 cut(s)	462, 626
BpuEI	CTTGAG	1 cut(s)	1327
BsaAI	YACGTR	1 cut(s)	384
BsaBI	GATNNNNATC	1 cut(s)	1600
BsaHI	GRCGYC	2 cut(s)	169, 498
BsaJI	CCNNGG	5 cut(s)	8, 356, 616, 922, 1551
BsaWI	WCCGGW	1 cut(s)	569
BsaXI	ACNNNNNCTCC	2 cut(s)	1530, 1560
Bsc4I	CCNNNNNNNGG	2 cut(s)	181, 1634
Bse118I	RCCGGY	2 cut(s)	147, 569
Bse1I	ACTGG	1 cut(s)	1115
Bse3DI	GCAATG	2 cut(s)	520, 1404
Bse8I	GATNNNNATC	1 cut(s)	1600
BseBI	CCWGG	1 cut(s)	1176
BseDI	CCNNGG	5 cut(s)	8, 356, 616, 922, 1551
BseGI	GGATG	4 cut(s)	868, 889, 979, 1530
BseJI	GATNNNNATC	1 cut(s)	1600
BseLI	CCNNNNNNNGG	2 cut(s)	181, 1634
BseMI	GCAATG	2 cut(s)	520, 1404
BseMII	CTCAG	4 cut(s)	281, 453, 1103, 1310
BseNI	ACTGG	1 cut(s)	1115
BseRI	GAGGAG	1 cut(s)	112
BseSI	GKGCMC	2 cut(s)	526, 534
BseXI	GCAGC	2 cut(s)	1266, 1447
BseYI	CCCAGC	2 cut(s)	534, 1147
Bsh1236I	CGCG	5 cut(s)	65, 194, 244, 1416, 1606
Bsh1285I	CGRYCG	1 cut(s)	166
BshFI	GGCC	2 cut(s)	615, 1094
BshTI	ACCGGT	1 cut(s)	569
BsiEI	CGRYCG	1 cut(s)	166
BsiHKAI	GWGCWC	2 cut(s)	473, 526
BsiHKCI	CYCGRG	1 cut(s)	1049
BsiSI	CCGG	2 cut(s)	148, 570
BslFI	GGGAC	3 cut(s)	271, 1041, 1591
BslI	CCNNNNNNNGG	2 cut(s)	181, 1634
BsmAI	GTCTC	2 cut(s)	176, 1050
BsmBI	CGTCTC	1 cut(s)	176
BsmFI	GGGAC	3 cut(s)	271, 1041, 1591
BsnI	GGCC	2 cut(s)	615, 1094
BsoBI	CYCGRG	1 cut(s)	1049
Bsp1286I	GDGCHC	3 cut(s)	473, 526, 534
Bsp143I	GATC	8 cut(s)	85, 102, 179, 214, 252, 574, 1168, 1601
Bsp1720I	GCTNAGC	2 cut(s)	462, 626
Bsp19I	CCATGG	1 cut(s)	922
Bsp68I	TCGCGA	1 cut(s)	1606
BspACI	CCGC	6 cut(s)	78, 244, 263, 339, 1498, 1649
BspANI	GGCC	2 cut(s)	615, 1094
BspCNI	CTCAG	4 cut(s)	280, 454, 1102, 1309
BspFNI	CGCG	5 cut(s)	65, 194, 244, 1416, 1606
BspHI	TCATGA	1 cut(s)	1078
BspLI	GGNNCC	5 cut(s)	6, 186, 206, 354, 1095
BspPI	GGATC	2 cut(s)	97, 260
BsrDI	GCAATG	2 cut(s)	520, 1404
BsrFI	RCCGGY	2 cut(s)	147, 569
BsrI	ACTGG	1 cut(s)	1115
BssAI	RCCGGY	2 cut(s)	147, 569
BssECI	CCNNGG	5 cut(s)	8, 356, 616, 922, 1551
BssMI	GATC	8 cut(s)	85, 102, 179, 214, 252, 574, 1168, 1601
BssNI	GRCGYC	2 cut(s)	169, 498
BssT1I	CCWWGG	2 cut(s)	356, 922
Bst2UI	CCWGG	1 cut(s)	1176
Bst4CI	ACNGT	7 cut(s)	164, 304, 329, 419, 731, 823, 1044
BstACI	GRCGYC	2 cut(s)	169, 498
BstBAI	YACGTR	1 cut(s)	384
BstC8I	GCNNGC	4 cut(s)	139, 153, 337, 540
BstDEI	CTNAG	5 cut(s)	267, 462, 626, 1089, 1296
BstDSI	CCRYGG	2 cut(s)	616, 922
BstEII	GGTNACC	1 cut(s)	341
BstF5I	GGATG	4 cut(s)	868, 889, 979, 1530
BstFNI	CGCG	5 cut(s)	65, 194, 244, 1416, 1606
BstH2I	RGCGCY	1 cut(s)	457
BstHHI	GCGC	4 cut(s)	65, 196, 456, 1416
BstKTI	GATC	8 cut(s)	88, 105, 182, 217, 255, 577, 1171, 1604
BstMAI	GTCTC	2 cut(s)	176, 1050
BstMBI	GATC	8 cut(s)	85, 102, 179, 214, 252, 574, 1168, 1601
BstMCI	CGRYCG	1 cut(s)	166
BstMWI	GCNNNNNNNGC	7 cut(s)	77, 193, 202, 606, 776, 872, 1655
BstNI	CCWGG	1 cut(s)	1176
BstNSI	RCATGY	1 cut(s)	767
BstPI	GGTNACC	1 cut(s)	341
BstSCI	CCNGG	1 cut(s)	1174
BstSLI	GKGCMC	2 cut(s)	526, 534
BstUI	CGCG	5 cut(s)	65, 194, 244, 1416, 1606
BstV1I	GCAGC	2 cut(s)	1266, 1447
BstXI	CCANNNNNNTGG	1 cut(s)	1451
BsuI	GTATCC	1 cut(s)	283
BsuRI	GGCC	2 cut(s)	615, 1094
BtgI	CCRYGG	2 cut(s)	616, 922
BtgZI	GCGATG	1 cut(s)	1126
BtsCI	GGATG	4 cut(s)	868, 889, 979, 1530
BtsI	GCAGTG	1 cut(s)	484
BtsIMutI	CAGTG	2 cut(s)	484, 1040
BtuMI	TCGCGA	1 cut(s)	1606
Cac8I	GCNNGC	4 cut(s)	139, 153, 337, 540
CaiI	CAGNNNCTG	1 cut(s)	965
CciI	TCATGA	1 cut(s)	1078
CfoI	GCGC	4 cut(s)	65, 196, 456, 1416
Cfr10I	RCCGGY	2 cut(s)	147, 569
Cfr13I	GGNCC	6 cut(s)	22, 352, 613, 637, 926, 1093
CseI	GACGC	4 cut(s)	143, 158, 250, 619
Csp6I	GTAC	4 cut(s)	232, 300, 385, 1358
CspAI	ACCGGT	1 cut(s)	569
CspCI	CAANNNNNGTGG	2 cut(s)	40, 75
CviQI	GTAC	4 cut(s)	232, 300, 385, 1358
DdeI	CTNAG	5 cut(s)	267, 462, 626, 1089, 1296
DpnI	GATC	8 cut(s)	87, 104, 181, 216, 254, 576, 1170, 1603
DpnII	GATC	8 cut(s)	85, 102, 179, 214, 252, 574, 1168, 1601
DraI	TTTAAA	1 cut(s)	1074
Ecl136II	GAGCTC	1 cut(s)	471
Eco130I	CCWWGG	2 cut(s)	356, 922
Eco24I	GRGCYC	1 cut(s)	473
Eco32I	GATATC	1 cut(s)	949
Eco47I	GGWCC	4 cut(s)	22, 352, 637, 926
Eco53kI	GAGCTC	1 cut(s)	471
Eco57I	CTGAAG	2 cut(s)	773, 1655
Eco88I	CYCGRG	1 cut(s)	1049
Eco91I	GGTNACC	1 cut(s)	341
EcoICRI	GAGCTC	1 cut(s)	471
EcoO109I	RGGNCCY	2 cut(s)	352, 1093
EcoO65I	GGTNACC	1 cut(s)	341
EcoRII	CCWGG	1 cut(s)	1174
EcoRV	GATATC	1 cut(s)	949
EcoT14I	CCWWGG	2 cut(s)	356, 922
EcoT22I	ATGCAT	1 cut(s)	850
EcoT38I	GRGCYC	1 cut(s)	473
ErhI	CCWWGG	2 cut(s)	356, 922
Esp3I	CGTCTC	1 cut(s)	176
FaqI	GGGAC	3 cut(s)	271, 1041, 1591
FauNDI	CATATG	1 cut(s)	844
FbaI	TGATCA	1 cut(s)	85
Fnu4HI	GCNGC	3 cut(s)	245, 1280, 1436
FokI	GGATG	4 cut(s)	875, 896, 986, 1537
FriOI	GRGCYC	1 cut(s)	473
Fsp4HI	GCNGC	3 cut(s)	245, 1280, 1436
FspBI	CTAG	3 cut(s)	357, 378, 527
GlaI	GCGC	4 cut(s)	64, 195, 455, 1415
GluI	GCNGC	3 cut(s)	245, 1280, 1436
GsaI	CCCAGC	2 cut(s)	538, 1151
GsuI	CTGGAG	2 cut(s)	158, 457
HaeII	RGCGCY	1 cut(s)	457
HaeIII	GGCC	2 cut(s)	615, 1094
HapII	CCGG	2 cut(s)	148, 570
HgaI	GACGC	4 cut(s)	143, 158, 250, 619
HhaI	GCGC	4 cut(s)	65, 196, 456, 1416
Hin1I	GRCGYC	2 cut(s)	169, 498
Hin6I	GCGC	4 cut(s)	63, 194, 454, 1414
HinP1I	GCGC	4 cut(s)	63, 194, 454, 1414
HinfI	GANTC	3 cut(s)	668, 1262, 1367
HpaII	CCGG	2 cut(s)	148, 570
HphI	GGTGA	4 cut(s)	503, 584, 970, 1190
Hpy166II	GTNNAC	4 cut(s)	524, 1181, 1303, 1350
Hpy188I	TCNGA	8 cut(s)	12, 99, 184, 270, 282, 325, 1068, 1431
Hpy188III	TCNNGA	9 cut(s)	175, 256, 350, 929, 1049, 1079, 1136, 1326, 1605
Hpy8I	GTNNAC	4 cut(s)	524, 1181, 1303, 1350
Hpy99I	CGWCG	4 cut(s)	134, 137, 164, 244
HpyAV	CCTTC	7 cut(s)	38, 116, 166, 748, 790, 889, 963
HpyCH4III	ACNGT	7 cut(s)	164, 304, 329, 419, 731, 823, 1044
HpyCH4IV	ACGT	3 cut(s)	383, 498, 589
HpyCH4V	TGCA	8 cut(s)	414, 441, 524, 848, 875, 1282, 1435, 1658
HpyF10VI	GCNNNNNNNGC	7 cut(s)	77, 193, 202, 606, 776, 872, 1655
HpyF3I	CTNAG	5 cut(s)	267, 462, 626, 1089, 1296
HpySE526I	ACGT	3 cut(s)	383, 498, 589
Hsp92I	GRCGYC	2 cut(s)	169, 498
HspAI	GCGC	4 cut(s)	63, 194, 454, 1414
Ksp22I	TGATCA	1 cut(s)	85
Kzo9I	GATC	8 cut(s)	85, 102, 179, 214, 252, 574, 1168, 1601
LmnI	GCTCC	6 cut(s)	10, 184, 210, 476, 1138, 1510
Lsp1109I	GCAGC	2 cut(s)	1266, 1447
LweI	GCATC	4 cut(s)	853, 874, 1203, 1422
MaeI	CTAG	3 cut(s)	357, 378, 527
MaeII	ACGT	3 cut(s)	383, 498, 589
MaeIII	GTNAC	4 cut(s)	304, 341, 419, 976
MalI	GATC	8 cut(s)	87, 104, 181, 216, 254, 576, 1170, 1603
MboI	GATC	8 cut(s)	85, 102, 179, 214, 252, 574, 1168, 1601
MboII	GAAGA	2 cut(s)	1092, 1163
MfeI	CAATTG	1 cut(s)	409
MhlI	GDGCHC	3 cut(s)	473, 526, 534
MluCI	AATT	7 cut(s)	33, 52, 409, 937, 1407, 1448, 1472
MlyI	GAGTC	1 cut(s)	1271
MmeI	TCCRAC	1 cut(s)	1516
Mph1103I	ATGCAT	1 cut(s)	850
MseI	TTAA	5 cut(s)	788, 879, 1073, 1344, 1680
MslI	CAYNNNNRTG	1 cut(s)	311
MspA1I	CMGCKG	2 cut(s)	1151, 1465
MspI	CCGG	2 cut(s)	148, 570
MspR9I	CCNGG	1 cut(s)	1176
MunI	CAATTG	1 cut(s)	409
MvaI	CCWGG	1 cut(s)	1176
MvnI	CGCG	5 cut(s)	65, 194, 244, 1416, 1606
MwoI	GCNNNNNNNGC	7 cut(s)	77, 193, 202, 606, 776, 872, 1655
NcoI	CCATGG	1 cut(s)	922
NdeI	CATATG	1 cut(s)	844
NdeII	GATC	8 cut(s)	85, 102, 179, 214, 252, 574, 1168, 1601
NlaIV	GGNNCC	5 cut(s)	6, 186, 206, 354, 1095
NmuCI	GTSAC	3 cut(s)	304, 419, 976
NruI	TCGCGA	1 cut(s)	1606
NsiI	ATGCAT	1 cut(s)	850
NspI	RCATGY	1 cut(s)	767
OliI	CACNNNNGTG	1 cut(s)	311
PagI	TCATGA	1 cut(s)	1078
PciI	ACATGT	1 cut(s)	763
PfeI	GAWTC	2 cut(s)	668, 1367
PinAI	ACCGGT	1 cut(s)	569
PkrI	GCNGC	3 cut(s)	246, 1281, 1437
PleI	GAGTC	1 cut(s)	1270
PpsI	GAGTC	1 cut(s)	1270
Ppu21I	YACGTR	1 cut(s)	384
PpuMI	RGGWCCY	1 cut(s)	352
PscI	ACATGT	1 cut(s)	763
PsiI	TTATAA	1 cut(s)	942
Psp124BI	GAGCTC	1 cut(s)	473
Psp5II	RGGWCCY	1 cut(s)	352
Psp6I	CCWGG	1 cut(s)	1174
PspEI	GGTNACC	1 cut(s)	341
PspFI	CCCAGC	2 cut(s)	534, 1147
PspGI	CCWGG	1 cut(s)	1174
PspN4I	GGNNCC	5 cut(s)	6, 186, 206, 354, 1095
PspPI	GGNCC	6 cut(s)	22, 352, 613, 637, 926, 1093
PspPPI	RGGWCCY	1 cut(s)	352
PstNI	CAGNNNCTG	1 cut(s)	965
PvuII	CAGCTG	2 cut(s)	1151, 1465
RruI	TCGCGA	1 cut(s)	1606
RsaI	GTAC	4 cut(s)	233, 301, 386, 1359
RsaNI	GTAC	4 cut(s)	232, 300, 385, 1358
RseI	CAYNNNNRTG	1 cut(s)	311
SacI	GAGCTC	1 cut(s)	473
SaqAI	TTAA	5 cut(s)	788, 879, 1073, 1344, 1680
SatI	GCNGC	3 cut(s)	245, 1280, 1436
Sau3AI	GATC	8 cut(s)	85, 102, 179, 214, 252, 574, 1168, 1601
Sau96I	GGNCC	6 cut(s)	22, 352, 613, 637, 926, 1093
ScaI	AGTACT	1 cut(s)	301
SchI	GAGTC	1 cut(s)	1271
ScrFI	CCNGG	1 cut(s)	1176
SduI	GDGCHC	3 cut(s)	473, 526, 534
SfaNI	GCATC	4 cut(s)	853, 874, 1203, 1422
SgrAI	CRCCGGYG	1 cut(s)	147
SinI	GGWCC	4 cut(s)	22, 352, 637, 926
SmiMI	CAYNNNNRTG	1 cut(s)	311
SmlI	CTYRAG	1 cut(s)	1306
SmoI	CTYRAG	1 cut(s)	1306
SpeI	ACTAGT	1 cut(s)	526
Sse9I	AATT	7 cut(s)	33, 52, 409, 937, 1407, 1448, 1472
SsiI	CCGC	6 cut(s)	78, 244, 263, 339, 1498, 1649
SspI	AATATT	2 cut(s)	562, 745
SspMI	CTAG	3 cut(s)	357, 378, 527
SstI	GAGCTC	1 cut(s)	473
StyD4I	CCNGG	1 cut(s)	1174
StyI	CCWWGG	2 cut(s)	356, 922
TaaI	ACNGT	7 cut(s)	164, 304, 329, 419, 731, 823, 1044
TaiI	ACGT	3 cut(s)	386, 501, 592
TaqI	TCGA	3 cut(s)	159, 1206, 1287
TasI	AATT	7 cut(s)	33, 52, 409, 937, 1407, 1448, 1472
TatI	WGTACW	1 cut(s)	299
TauI	GCSGC	1 cut(s)	247
TfiI	GAWTC	2 cut(s)	668, 1367
Tru1I	TTAA	5 cut(s)	788, 879, 1073, 1344, 1680
Tru9I	TTAA	5 cut(s)	788, 879, 1073, 1344, 1680
TscAI	CASTG	2 cut(s)	484, 1047
TseFI	GTSAC	3 cut(s)	304, 419, 976
TseI	GCWGC	2 cut(s)	1279, 1435
Tsp45I	GTSAC	3 cut(s)	304, 419, 976
TspDTI	ATGAA	7 cut(s)	660, 666, 822, 908, 1250, 1380, 1415
TspGWI	ACGGA	1 cut(s)	31
TspRI	CASTG	2 cut(s)	484, 1047
VneI	GTGCAC	1 cut(s)	522
VpaK11BI	GGWCC	4 cut(s)	22, 352, 637, 926
XapI	RAATTY	1 cut(s)	1448
XceI	RCATGY	1 cut(s)	767
XcmI	CCANNNNNNNNNTGG	1 cut(s)	593
XmaJI	CCTAGG	1 cut(s)	356
XspI	CTAG	3 cut(s)	357, 378, 527
ZraI	GACGTC	1 cut(s)	499
ZrmI	AGTACT	1 cut(s)	301
Zsp2I	ATGCAT	1 cut(s)	850

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.