Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0008275

Physical Location & Seq

Genomic Coordinates Reverse (-)

4226075 .. 4230854

Gene Structure 4780 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g06910.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGATCCTCCCTCTCCATCTCTCGTCTCCCAAATCCAATTGGCACCACCGGCGACCTGACGGCCGGCGGCTCCAGAGATCGGTGCCCAACGCGCACATGAGGCTATACGACGATCTTCTCGCCAACGGGTACTACACGACGCGGGTGTGGATTGGGACGCCGCCGCAGCAATTCGCGCTGATTGTGGATACGGGAAGTACAGTGACTTATGTGCCTTGCTTTGACTGTGAACAGTGTGGTATTCATCAGGACCCCAGGTTCCAGCCTGATTTATCTAGTACATATCAACCTGTGAAGTGCAGTATCAATTGTAACTGTGACAAGAAAGAAGCTCAATGCACTTATGAGCGGCGGTATGCTGAGATGAGCTCTAGTAGTGGGGTGCTTGGTGAGGACGTCATTTCATTTGGTAACGAGAGTGTGCTTGTGCCCCAGCGTGCTGTTTTTGGTTGTGAAAATGTTGAAACTGGTGATCTTTACAGTCAACGTGCTGATGGAATTATCGGGTTGGGTCGTGGTCAACTTAGTGTAATGGATCAACTTGTTGACAAGGGTGTTATTAGTGATTCATTCTCATTATGCTACGGAGGGATGGGTGTAGGAGGGGGTGCCATGGTTCTTGGCGGGATGAAATCTCCCCCTGATATGGTATTTGCTCACTCAGATCGCTTTCGCAGTCCATATTACAACATTGACCTGAAGAAAATACATGTGGCCGGAAAACCTTTGAAGTTAAATCCCAAGATCTTTAATGGCAATCATGGAACTGTATTGGATAGTGGAACTACTTATGCGTACCTTCCAAAGGATGCTTTTCATGCATTTAAGGATGCTATTAAGAGGCAAATTCAGTCCCTCAAGCAAATCCATGGTCCTGACCCAAGTTATCAAGATATTTGTTTTTCAGGAGCTGGAAGGGATGTCACACAACTGTCAAAAGTTTTTCCACAGGTTGATATGGTATTTGGCAATGGGCAGAAGTTATCACTGTCTCCAGAGAATTACCTGTTCCCGCATACAAAGGTTGGTGGTGCTTATTGCCTGGGGATTTTTGAAAATAGCGAGGATACTACTCTTTTAGGAGGAATCATTGCACGTAATACTCTTGTGACTTATGACCGGAAAAACGATAAGATTGGCTTTTGGAAAACTAATTGTTCTGAACTATGGAAGAAATTGAATTATAGTAATGCCCCGCCTCCAGCACCTTTAGCCTCTGATGGCCGGAATATGAGTGTAGAAATTTCTCCTAACATTGCCCCAGGTGGATTGCCTGAAACACTTCTTCCAGGTGAACTTCAAATAGGGCTAATAAGTTTCGATATGATGCTTAGCATCAGTAACAGTATGAAACCCAACCTCACAGAACTCGCAGATTCTATTGCTCATGAGCTGGAAGTTGATATTTCGCAGGTTCGCTTAATGAACTACACCCATACAGGAAGTGATTTCGTTGTTAGATGGACAATCTTCCCTGCTGAATCTGCAACTGGCTTTTCTACTGCAAAAGCAACAGGCATAATTCTACGCTTAAGGGAGCATCATATGCAGCTTCCCCAGAAATTTGGAAGTTATCAGTTGGTCAAAGTGAAGGCTGAGCCTCGAAAGAAGCGGTCGTGGTGGAATCAACACTCTTTGGCGGTGGTAGTTGGATCTATAATTACCTCAGTTGTCGGATTATTAGCATTAGGGACATGGCTGGTTAGGAAGTATAGATTGCAAGAGATCGTTTCGTACGAGCCTGTTGGTGCCAGTGCCGTTGTTCCTGAGCAAGAGCTTCAACCGCTTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

598

Amino Acids

66.07

Weight (kDa)

8.14

Isoelectric Point (pI)

39.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43100 AT5G43100
fragaria_vesca	FvH4_2g33420
malus_domestica	MD08G1089200.v1.1 MD08G1089400.v1.1 MD15G1074000.v1.1
prunus_persica	Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1 Prupe.1G426800_v2.0.a1
pyrus_communis	pycom08g07250 pycom08g07270 pycom15g06910
rosa_chinensis	RchiOBHm_Chr6g0309111
rosa_laevigata	RLG00000010588
rosa_roxburghii	Rroxscaffold_7G00159640
rosa_rugosa	Rorug06G0369800
rosa_samantha	Rh6AG482600 Rh6BG491600 Rh6BG491700 Rh6CG496400 Rh6DG483300
rosa_wichuraiana	Rw6G042020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	399
Acc36I	ACCTGC	1 cut(s)	1402
AccB1I	GGYRCC	4 cut(s)	42, 82, 608, 1748
AccBSI	CCGCTC	1 cut(s)	349
AccII	CGCG	3 cut(s)	92, 142, 176
AclWI	GGATC	2 cut(s)	543, 1660
AcoI	YGGCCR	3 cut(s)	61, 714, 1222
AcsI	RAATTY	3 cut(s)	846, 1242, 1562
AcuI	CTGAAG	1 cut(s)	719
AcyI	GRCGYC	2 cut(s)	158, 396
AfaI	GTAC	5 cut(s)	131, 199, 280, 797, 1736
AfiI	CCNNNNNNNGG	3 cut(s)	79, 646, 805
AflII	CTTAAG	1 cut(s)	1531
AflIII	ACRYGT	1 cut(s)	709
AgsI	TTSAA	6 cut(s)	464, 730, 1055, 1180, 1301, 1781
AjnI	CCWGG	4 cut(s)	254, 1041, 1261, 1288
AloI	GAACNNNNNNTCC	2 cut(s)	242, 274
AluBI	AGCT	6 cut(s)	332, 369, 911, 1393, 1552, 1777
AluI	AGCT	6 cut(s)	332, 369, 911, 1393, 1552, 1777
Alw21I	GWGCWC	1 cut(s)	371
Alw26I	GTCTC	2 cut(s)	30, 996
AlwI	GGATC	2 cut(s)	543, 1660
AlwNI	CAGNNNCTG	1 cut(s)	911
AoxI	GGCC	3 cut(s)	61, 714, 1222
ApeKI	GCWGC	2 cut(s)	166, 1549
ApoI	RAATTY	3 cut(s)	846, 1242, 1562
ArsI	GACNNNNNNTTYG	2 cut(s)	856, 888
Asp700I	GAANNNNTTC	1 cut(s)	1281
AspLEI	GCGC	2 cut(s)	94, 178
AspS9I	GGNCC	2 cut(s)	250, 872
AsuHPI	GGTGA	3 cut(s)	401, 482, 1304
AvaII	GGWCC	2 cut(s)	250, 872
BaeGI	GKGCMC	2 cut(s)	87, 432
BanI	GGYRCC	4 cut(s)	42, 82, 608, 1748
BanII	GRGCYC	1 cut(s)	371
Bbv12I	GWGCWC	1 cut(s)	371
BbvI	GCAGC	2 cut(s)	178, 1561
BccI	CCATC	5 cut(s)	24, 488, 586, 1214, 1455
BceAI	ACGGC	2 cut(s)	76, 1742
BciT130I	CCWGG	4 cut(s)	256, 1043, 1263, 1290
BciVI	GTATCC	2 cut(s)	181, 1060
BcoDI	GTCTC	2 cut(s)	30, 996
BfaI	CTAG	2 cut(s)	276, 372
BfrI	CTTAAG	1 cut(s)	1531
BfuAI	ACCTGC	1 cut(s)	1402
BfuI	GTATCC	2 cut(s)	181, 1060
BglII	AGATCT	1 cut(s)	744
BisI	GCNGC	6 cut(s)	68, 161, 164, 167, 350, 1550
BlpI	GCTNAGC	2 cut(s)	1331, 1596
BlsI	GCNGC	6 cut(s)	69, 162, 165, 168, 351, 1551
Bme1390I	CCNGG	4 cut(s)	256, 1043, 1263, 1290
Bme18I	GGWCC	2 cut(s)	250, 872
BmgT120I	GGNCC	2 cut(s)	250, 872
BmiI	GGNNCC	7 cut(s)	44, 71, 84, 252, 260, 610, 1750
BmrFI	CCNGG	4 cut(s)	256, 1043, 1263, 1290
BmsI	GCATC	5 cut(s)	799, 820, 1317, 1344, 1549
BplI	GAGNNNNNCTC	2 cut(s)	353, 385
BpmI	CTGGAG	3 cut(s)	56, 978, 1185
Bpu10I	CCTNAGC	1 cut(s)	1767
Bpu1102I	GCTNAGC	2 cut(s)	1331, 1596
BpuEI	CTTGAG	1 cut(s)	842
BsaAI	YACGTR	1 cut(s)	1097
BsaHI	GRCGYC	2 cut(s)	158, 396
BsaJI	CCNNGG	5 cut(s)	254, 612, 868, 1042, 1261
BsaWI	WCCGGW	1 cut(s)	1119
Bsc4I	CCNNNNNNNGG	3 cut(s)	79, 646, 805
Bse118I	RCCGGY	2 cut(s)	48, 63
Bse1I	ACTGG	3 cut(s)	472, 1495, 1752
Bse3DI	GCAATG	3 cut(s)	976, 1089, 1254
BseBI	CCWGG	4 cut(s)	256, 1043, 1263, 1290
BseDI	CCNNGG	5 cut(s)	254, 612, 868, 1042, 1261
BseGI	GGATG	5 cut(s)	597, 633, 814, 835, 925
BseLI	CCNNNNNNNGG	3 cut(s)	79, 646, 805
BseMI	GCAATG	3 cut(s)	976, 1089, 1254
BseMII	CTCAG	5 cut(s)	351, 675, 1587, 1680, 1758
BseNI	ACTGG	3 cut(s)	472, 1495, 1752
BseSI	GKGCMC	2 cut(s)	87, 432
BseX3I	CGGCCG	1 cut(s)	61
BseXI	GCAGC	2 cut(s)	178, 1561
BseYI	CCCAGC	1 cut(s)	432
BsgI	GTGCAG	1 cut(s)	319
Bsh1236I	CGCG	3 cut(s)	92, 142, 176
Bsh1285I	CGRYCG	2 cut(s)	64, 1616
BshFI	GGCC	3 cut(s)	63, 716, 1224
BshNI	GGYRCC	4 cut(s)	42, 82, 608, 1748
BsiEI	CGRYCG	2 cut(s)	64, 1616
BsiHKAI	GWGCWC	1 cut(s)	371
BsiSI	CCGG	5 cut(s)	49, 64, 717, 1120, 1225
BsiWI	CGTACG	1 cut(s)	1734
BslFI	GGGAC	3 cut(s)	169, 838, 1705
BslI	CCNNNNNNNGG	3 cut(s)	79, 646, 805
BsmAI	GTCTC	2 cut(s)	30, 996
BsmBI	CGTCTC	1 cut(s)	30
BsmFI	GGGAC	3 cut(s)	169, 838, 1705
BsnI	GGCC	3 cut(s)	63, 716, 1224
Bsp1286I	GDGCHC	3 cut(s)	87, 371, 432
Bsp143I	GATC	9 cut(s)	3, 77, 112, 472, 535, 664, 744, 1652, 1725
Bsp1720I	GCTNAGC	2 cut(s)	1331, 1596
Bsp19I	CCATGG	2 cut(s)	612, 868
BspANI	GGCC	3 cut(s)	63, 716, 1224
BspCNI	CTCAG	5 cut(s)	352, 674, 1588, 1679, 1759
BspFNI	CGCG	3 cut(s)	92, 142, 176
BspHI	TCATGA	1 cut(s)	1387
BspLI	GGNNCC	7 cut(s)	44, 71, 84, 252, 260, 610, 1750
BspMI	ACCTGC	1 cut(s)	1402
BspPI	GGATC	2 cut(s)	543, 1660
BspT107I	GGYRCC	4 cut(s)	42, 82, 608, 1748
BspTI	CTTAAG	1 cut(s)	1531
BsrBI	CCGCTC	1 cut(s)	349
BsrDI	GCAATG	3 cut(s)	976, 1089, 1254
BsrFI	RCCGGY	2 cut(s)	48, 63
BsrI	ACTGG	3 cut(s)	472, 1495, 1752
BssAI	RCCGGY	2 cut(s)	48, 63
BssECI	CCNNGG	5 cut(s)	254, 612, 868, 1042, 1261
BssMI	GATC	9 cut(s)	3, 77, 112, 472, 535, 664, 744, 1652, 1725
BssNI	GRCGYC	2 cut(s)	158, 396
BssT1I	CCWWGG	2 cut(s)	612, 868
Bst2UI	CCWGG	4 cut(s)	256, 1043, 1263, 1290
Bst4CI	ACNGT	9 cut(s)	202, 227, 234, 317, 482, 769, 933, 990, 1346
BstACI	GRCGYC	2 cut(s)	158, 396
BstAFI	CTTAAG	1 cut(s)	1531
BstAPI	GCANNNNNTGC	1 cut(s)	1546
BstBAI	YACGTR	1 cut(s)	1097
BstC8I	GCNNGC	2 cut(s)	65, 438
BstDEI	CTNAG	8 cut(s)	360, 524, 661, 1331, 1596, 1666, 1767, 1787
BstDSI	CCRYGG	2 cut(s)	612, 868
BstENI	CCTNNNNNAGG	1 cut(s)	803
BstF5I	GGATG	5 cut(s)	597, 633, 814, 835, 925
BstFNI	CGCG	3 cut(s)	92, 142, 176
BstHHI	GCGC	2 cut(s)	94, 178
BstKTI	GATC	9 cut(s)	6, 80, 115, 475, 538, 667, 747, 1655, 1728
BstMAI	GTCTC	2 cut(s)	30, 996
BstMBI	GATC	9 cut(s)	3, 77, 112, 472, 535, 664, 744, 1652, 1725
BstMCI	CGRYCG	2 cut(s)	64, 1616
BstNI	CCWGG	4 cut(s)	256, 1043, 1263, 1290
BstNSI	RCATGY	1 cut(s)	713
BstSCI	CCNGG	4 cut(s)	254, 1041, 1261, 1288
BstSLI	GKGCMC	2 cut(s)	87, 432
BstUI	CGCG	3 cut(s)	92, 142, 176
BstV1I	GCAGC	2 cut(s)	178, 1561
BstX2I	RGATCY	2 cut(s)	744, 1652
BstXI	CCANNNNNNTGG	1 cut(s)	1565
BstYI	RGATCY	2 cut(s)	744, 1652
BstZI	CGGCCG	1 cut(s)	61
BsuI	GTATCC	2 cut(s)	181, 1060
BsuRI	GGCC	3 cut(s)	63, 716, 1224
BtgI	CCRYGG	2 cut(s)	612, 868
BtsCI	GGATG	5 cut(s)	597, 633, 814, 835, 925
BtsIMutI	CAGTG	4 cut(s)	207, 239, 986, 1759
BveI	ACCTGC	1 cut(s)	1402
Cac8I	GCNNGC	2 cut(s)	65, 438
CaiI	CAGNNNCTG	1 cut(s)	911
CciI	TCATGA	1 cut(s)	1387
CfoI	GCGC	2 cut(s)	94, 178
Cfr10I	RCCGGY	2 cut(s)	48, 63
Cfr13I	GGNCC	2 cut(s)	250, 872
CseI	GACGC	2 cut(s)	148, 166
Csp6I	GTAC	5 cut(s)	130, 198, 279, 796, 1735
CviAII	CATG	8 cut(s)	97, 613, 710, 761, 818, 869, 1388, 1695
CviQI	GTAC	5 cut(s)	130, 198, 279, 796, 1735
DdeI	CTNAG	8 cut(s)	360, 524, 661, 1331, 1596, 1666, 1767, 1787
DpnI	GATC	9 cut(s)	5, 79, 114, 474, 537, 666, 746, 1654, 1727
DpnII	GATC	9 cut(s)	3, 77, 112, 472, 535, 664, 744, 1652, 1725
EaeI	YGGCCR	3 cut(s)	61, 714, 1222
EagI	CGGCCG	1 cut(s)	61
Ecl136II	GAGCTC	1 cut(s)	369
EclXI	CGGCCG	1 cut(s)	61
Eco130I	CCWWGG	2 cut(s)	612, 868
Eco24I	GRGCYC	1 cut(s)	371
Eco47I	GGWCC	2 cut(s)	250, 872
Eco52I	CGGCCG	1 cut(s)	61
Eco53kI	GAGCTC	1 cut(s)	369
Eco57I	CTGAAG	1 cut(s)	719
EcoICRI	GAGCTC	1 cut(s)	369
EcoNI	CCTNNNNNAGG	1 cut(s)	803
EcoO109I	RGGNCCY	1 cut(s)	250
EcoRII	CCWGG	4 cut(s)	254, 1041, 1261, 1288
EcoT14I	CCWWGG	2 cut(s)	612, 868
EcoT22I	ATGCAT	1 cut(s)	823
EcoT38I	GRGCYC	1 cut(s)	371
ErhI	CCWWGG	2 cut(s)	612, 868
Esp3I	CGTCTC	1 cut(s)	30
FaeI	CATG	8 cut(s)	100, 616, 713, 764, 821, 872, 1391, 1698
FalI	AAGNNNNNCTT	2 cut(s)	1124, 1156
FaqI	GGGAC	3 cut(s)	169, 838, 1705
FatI	CATG	8 cut(s)	96, 612, 709, 760, 817, 868, 1387, 1694
FauI	CCCGC	4 cut(s)	135, 617, 1020, 1203
FauNDI	CATATG	1 cut(s)	1545
Fnu4HI	GCNGC	6 cut(s)	68, 161, 164, 167, 350, 1550
FokI	GGATG	5 cut(s)	604, 640, 821, 842, 932
FriOI	GRGCYC	1 cut(s)	371
Fsp4HI	GCNGC	6 cut(s)	68, 161, 164, 167, 350, 1550
FspBI	CTAG	2 cut(s)	276, 372
GlaI	GCGC	2 cut(s)	93, 177
GluI	GCNGC	6 cut(s)	68, 161, 164, 167, 350, 1550
GsaI	CCCAGC	1 cut(s)	436
GsuI	CTGGAG	3 cut(s)	56, 978, 1185
HaeIII	GGCC	3 cut(s)	63, 716, 1224
HapII	CCGG	5 cut(s)	49, 64, 717, 1120, 1225
HgaI	GACGC	2 cut(s)	148, 166
HhaI	GCGC	2 cut(s)	94, 178
Hin1I	GRCGYC	2 cut(s)	158, 396
Hin1II	CATG	8 cut(s)	100, 616, 713, 764, 821, 872, 1391, 1698
Hin6I	GCGC	2 cut(s)	92, 176
HinP1I	GCGC	2 cut(s)	92, 176
HincII	GTYRAC	3 cut(s)	485, 521, 547
HindII	GTYRAC	3 cut(s)	485, 521, 547
HinfI	GANTC	5 cut(s)	566, 1086, 1376, 1481, 1624
HpaII	CCGG	5 cut(s)	49, 64, 717, 1120, 1225
HphI	GGTGA	3 cut(s)	401, 482, 1304
Hpy166II	GTNNAC	5 cut(s)	230, 485, 521, 547, 1295
Hpy188I	TCNGA	4 cut(s)	664, 1162, 1219, 1676
Hpy188III	TCNNGA	8 cut(s)	73, 248, 875, 890, 906, 995, 1388, 1766
Hpy8I	GTNNAC	5 cut(s)	230, 485, 521, 547, 1295
Hpy99I	CGWCG	2 cut(s)	113, 142
HpyAV	CCTTC	3 cut(s)	809, 909, 1585
HpyCH4III	ACNGT	9 cut(s)	202, 227, 234, 317, 482, 769, 933, 990, 1346
HpyCH4IV	ACGT	3 cut(s)	396, 487, 1096
HpyCH4V	TGCA	8 cut(s)	300, 339, 821, 1094, 1487, 1505, 1549, 1720
HpyF3I	CTNAG	8 cut(s)	360, 524, 661, 1331, 1596, 1666, 1767, 1787
HpySE526I	ACGT	3 cut(s)	396, 487, 1096
Hsp92I	GRCGYC	2 cut(s)	158, 396
Hsp92II	CATG	8 cut(s)	100, 616, 713, 764, 821, 872, 1391, 1698
HspAI	GCGC	2 cut(s)	92, 176
KroI	GCCGGC	1 cut(s)	63
KroNI	GCCGGC	1 cut(s)	65
Kzo9I	GATC	9 cut(s)	3, 77, 112, 472, 535, 664, 744, 1652, 1725
LmnI	GCTCC	3 cut(s)	75, 908, 1537
Lsp1109I	GCAGC	2 cut(s)	178, 1561
LweI	GCATC	5 cut(s)	799, 820, 1317, 1344, 1549
MaeI	CTAG	2 cut(s)	276, 372
MaeII	ACGT	3 cut(s)	396, 487, 1096
MaeIII	GTNAC	7 cut(s)	202, 311, 317, 410, 922, 1108, 1340
MalI	GATC	9 cut(s)	5, 79, 114, 474, 537, 666, 746, 1654, 1727
MbiI	CCGCTC	1 cut(s)	349
MboI	GATC	9 cut(s)	3, 77, 112, 472, 535, 664, 744, 1652, 1725
MboII	GAAGA	5 cut(s)	107, 712, 1183, 1277, 1462
MfeI	CAATTG	2 cut(s)	37, 307
MflI	RGATCY	2 cut(s)	744, 1652
MhlI	GDGCHC	3 cut(s)	87, 371, 432
MmeI	TCCRAC	2 cut(s)	1630, 1654
Mph1103I	ATGCAT	1 cut(s)	823
MroNI	GCCGGC	1 cut(s)	63
MroXI	GAANNNNTTC	1 cut(s)	1281
MseI	TTAA	6 cut(s)	734, 750, 825, 837, 1421, 1532
MspCI	CTTAAG	1 cut(s)	1531
MspI	CCGG	5 cut(s)	49, 64, 717, 1120, 1225
MspR9I	CCNGG	4 cut(s)	256, 1043, 1263, 1290
MunI	CAATTG	2 cut(s)	37, 307
MvaI	CCWGG	4 cut(s)	256, 1043, 1263, 1290
MvnI	CGCG	3 cut(s)	92, 142, 176
NaeI	GCCGGC	1 cut(s)	65
NcoI	CCATGG	2 cut(s)	612, 868
NdeI	CATATG	1 cut(s)	1545
NdeII	GATC	9 cut(s)	3, 77, 112, 472, 535, 664, 744, 1652, 1725
NgoMIV	GCCGGC	1 cut(s)	63
NlaIII	CATG	8 cut(s)	100, 616, 713, 764, 821, 872, 1391, 1698
NlaIV	GGNNCC	7 cut(s)	44, 71, 84, 252, 260, 610, 1750
NmuCI	GTSAC	4 cut(s)	202, 317, 922, 1108
NsiI	ATGCAT	1 cut(s)	823
NspI	RCATGY	1 cut(s)	713
PagI	TCATGA	1 cut(s)	1387
PciI	ACATGT	1 cut(s)	709
PcsI	WCGNNNNNNNCGW	1 cut(s)	1734
PdiI	GCCGGC	1 cut(s)	65
PdmI	GAANNNNTTC	1 cut(s)	1281
PfeI	GAWTC	5 cut(s)	566, 1086, 1376, 1481, 1624
Pfl23II	CGTACG	1 cut(s)	1734
PkrI	GCNGC	6 cut(s)	69, 162, 165, 168, 351, 1551
Ppu21I	YACGTR	1 cut(s)	1097
PpuMI	RGGWCCY	1 cut(s)	250
PscI	ACATGT	1 cut(s)	709
Psp124BI	GAGCTC	1 cut(s)	371
Psp5II	RGGWCCY	1 cut(s)	250
Psp6I	CCWGG	4 cut(s)	254, 1041, 1261, 1288
PspFI	CCCAGC	1 cut(s)	432
PspGI	CCWGG	4 cut(s)	254, 1041, 1261, 1288
PspLI	CGTACG	1 cut(s)	1734
PspN4I	GGNNCC	7 cut(s)	44, 71, 84, 252, 260, 610, 1750
PspPI	GGNCC	2 cut(s)	250, 872
PspPPI	RGGWCCY	1 cut(s)	250
PstNI	CAGNNNCTG	1 cut(s)	911
PsuI	RGATCY	2 cut(s)	744, 1652
RsaI	GTAC	5 cut(s)	131, 199, 280, 797, 1736
RsaNI	GTAC	5 cut(s)	130, 198, 279, 796, 1735
SacI	GAGCTC	1 cut(s)	371
SaqAI	TTAA	6 cut(s)	734, 750, 825, 837, 1421, 1532
SatI	GCNGC	6 cut(s)	68, 161, 164, 167, 350, 1550
Sau3AI	GATC	9 cut(s)	3, 77, 112, 472, 535, 664, 744, 1652, 1725
Sau96I	GGNCC	2 cut(s)	250, 872
ScrFI	CCNGG	4 cut(s)	256, 1043, 1263, 1290
SduI	GDGCHC	3 cut(s)	87, 371, 432
SfaNI	GCATC	5 cut(s)	799, 820, 1317, 1344, 1549
SgrAI	CRCCGGYG	1 cut(s)	48
SinI	GGWCC	2 cut(s)	250, 872
SmlI	CTYRAG	2 cut(s)	857, 1531
SmoI	CTYRAG	2 cut(s)	857, 1531
SspMI	CTAG	2 cut(s)	276, 372
SstI	GAGCTC	1 cut(s)	371
StyD4I	CCNGG	4 cut(s)	254, 1041, 1261, 1288
StyI	CCWWGG	2 cut(s)	612, 868
TaaI	ACNGT	9 cut(s)	202, 227, 234, 317, 482, 769, 933, 990, 1346
TaiI	ACGT	3 cut(s)	399, 490, 1099
TaqI	TCGA	2 cut(s)	1320, 1603
TatI	WGTACW	2 cut(s)	197, 278
TauI	GCSGC	4 cut(s)	70, 163, 166, 352
TfiI	GAWTC	5 cut(s)	566, 1086, 1376, 1481, 1624
Tru1I	TTAA	6 cut(s)	734, 750, 825, 837, 1421, 1532
Tru9I	TTAA	6 cut(s)	734, 750, 825, 837, 1421, 1532
TscAI	CASTG	4 cut(s)	207, 239, 993, 1759
TseFI	GTSAC	4 cut(s)	202, 317, 922, 1108
TseI	GCWGC	2 cut(s)	166, 1549
Tsp45I	GTSAC	4 cut(s)	202, 317, 922, 1108
TspDTI	ATGAA	7 cut(s)	233, 393, 558, 644, 806, 1364, 1439
TspGWI	ACGGA	1 cut(s)	600
TspRI	CASTG	4 cut(s)	207, 239, 993, 1759
Vha464I	CTTAAG	1 cut(s)	1531
VpaK11BI	GGWCC	2 cut(s)	250, 872
XagI	CCTNNNNNAGG	1 cut(s)	803
XapI	RAATTY	3 cut(s)	846, 1242, 1562
XceI	RCATGY	1 cut(s)	713
XmnI	GAANNNNTTC	1 cut(s)	1281
XspI	CTAG	2 cut(s)	276, 372
ZraI	GACGTC	1 cut(s)	397
Zsp2I	ATGCAT	1 cut(s)	823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.