Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0002390

Physical Location & Seq

Genomic Coordinates Forward (+)

8964743 .. 8967209

Gene Structure 2467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGCGATCAACATACATGGATGAGTATTCTGGTAAAAGAGCTGTTGATGGGCTCGTCTCTAAAAAGGGATCTGGTCTTGGTTTAAGGGAAACCCCCAATAGAGACCGCAATGCTCAGCTCTGTAGCCGGCTGGGATGTAGTGGAAGATTGAACTCTGTAAAAAGTGCTCAAATTGAAAAGGCCAAACCTTCAAGGCCAGTATTTCGCTCTTCGTCAAGTGGGAAAGAGATAATTGGAAGTTCCTCGAGGTCTTGCGTTGGTGTTGGCAACACAAGCAAGTCCATTGCAGAACCTTGCAAAAAGCTATCTTCTAATTTGGAAACTGATTCATCTGAAACCAGTAGTGTTCAGGATGATCCAGAAGTTTCAGAAATCGCTCCACCACTTGGAAAGATTCAAAGAGGGCTTCACCCTGAATTTCAAAATTCTGTGTCTAGTGAAGTCACTTTGATGGAAATTGGAAGCTCTGGTCTAGCATCAAATACAAGATCTCGAAGGAGTTTCAATCAGAGATCTGGATTGTGCAGCCAAGATTCCATAGTGGATTCTAAAGTTTCTACGGGATCTAAAAACACCATCCAGACACGGGCTAGCACAGCCAGGAATGGTTTAAGAAATCTAAGATGTAACTCAGTATCTGACGTTGTCCCTTCCAGTTGTTCATCATCAGATTCAAGCCTTGGTCGGAGAGAGACCATAAAGAAAAGAACTTCTGAAGGAGAAAGTAGTTCTGCTGCTAAGGGGAAGAAAATGAATGGGTCATCGTTAGCACAAAATCCCAGTTCTAGCCATGGCATCTCAATTTCTGATTCAAGAAGAGGTAGAAATATGCCTTCTAACAGGGATAACAATGGTGTTGCATCAGTTAGGACTCGGAGAACTGTCACTGGTCACTCGAGGGGAAGGCTGCTTCCTAATCAAGGAAGTGGAACCAATTCGTCATCCAGTGGATCCTCTGCAGGTCCACATACGTCTGAACCTGAAATGTCTATCAACTCGAATGCTTCTAGTTCATCACAACAGTCATCTGCTGAAGTTCCTTTAATTCGGCTGAATTCTTATAGCCGGCCAGGCAGTAGCAGTGGGACTTTACATGGCATTCTGCGAGCTGGTGCTTCAGATGTTGGGTTTTCCCGCTCTCTAAGGAACCAGGATGGACTGCGACGCTACAACATGGATGGGATAGCAGAGGTATTGCTAGCACTTGAGAGAATTGAACACGATGAAGAGCTAACATTTGAGCAACTACTTGTTCTTGAGACGAATTTGTTCCTGAATGGCCTAAACTTCTATGATCAGCACAGAGACATGAGACTGGATATCGACAACATGACATATGAGGAATTATTAGCTCTAGAAGAGAGGATGGGTACTGTCAGCACAGCATTGCCAGAAGAAGCATTGTCCAATTGCCTTAGGAAAAGCATCTATCAGTTTACACCCCAAGAAGATGCATCCGTAAGCTGGGATGGGAAGAAGGCGGATGTCAAATGCAGTATCTGCCAGGAAGAGTACGTGGCTGGAGATGAAGTTGGAAGATTGCGGTGCGAGCATAGATTTCACGTTGTCTGCGTAAACCAGTGGCTGCGGCTTAAGAATTGGTGCCCTATATGCAAAGGAGCAGCAGCAGCAGCAGCAGCTCCAGCACCATCGCCCTCGCCCTCGCCACCCTCCACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009057 GO:0009791 GO:0009908 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0022414 GO:0030163 GO:0031624 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0040008 GO:0042127 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0045926 GO:0046620 GO:0046621 GO:0048367 GO:0048437 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0051603 GO:0051865 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0090567 GO:0099402 GO:0140096 GO:1900055 GO:1900057 GO:1901564 GO:1901565 GO:1901575 GO:1905623 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

560

Amino Acids

60.16

Weight (kDa)

9.0

Isoelectric Point (pI)

59.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	497 - 539	6.8e-12	Ring finger domain
zf-C3HC4_2	PF13923	497 - 538	2e-07	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	497 - 539	5.5e-06	RING-H2 zinc finger domain
zf-RING_11	PF17123	498 - 525	1.3e-06	RING-like zinc finger
zf-C3HC4	PF00097	498 - 538	7.9e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002390)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31450 AT4G31450 AT5G10650 AT5G10650 AT5G10650 AT5G24870 AT5G24870 AT5G24870
fragaria_vesca	FvH4_2g36760 FvH4_2g36760 FvH4_2g36760 FvH4_2g36760 FvH4_2g36760 FvH4_2g36760 FvH4_2g36760 FvH4_2g36760 FvH4_2g36760 FvH4_2g36760
malus_domestica	MD08G1128400.v1.1 MD15G1107900.v1.1
prunus_persica	Prupe.1G460200_v2.0.a1 Prupe.1G460200_v2.0.a1 Prupe.1G460200_v2.0.a1 Prupe.1G460200_v2.0.a1 Prupe.1G460200_v2.0.a1 Prupe.1G460200_v2.0.a1
pyrus_communis	pycom08g10730 pycom15g09860
rosa_chinensis	RchiOBHm_Chr6g0304981
rosa_laevigata	RLG00000010931
rosa_multiflora	Rmu_co8384967.1_g000001 Rmu_sc0026376.1_g000001 Rmu_sc0028342.1_g000002
rosa_roxburghii	Rroxscaffold_7G00163300
rosa_rugosa	Rorug06G0336500 Rorug06G0336600 Rorug06G0336600
rosa_samantha	Rh6AG447900 Rh6BG453000 Rh6CG461600 Rh6DG448600
rosa_wichuraiana	Rw6G039010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	244
Acc36I	ACCTGC	1 cut(s)	950
AccB1I	GGYRCC	1 cut(s)	1602
AccB7I	CCANNNNNTGG	1 cut(s)	386
AccBSI	CCGCTC	1 cut(s)	1137
AciI	CCGC	5 cut(s)	106, 1135, 1481, 1543, 1588
AclWI	GGATC	5 cut(s)	76, 350, 571, 945, 958
AcoI	YGGCCR	1 cut(s)	1067
AcsI	RAATTY	4 cut(s)	416, 424, 1054, 1264
AcuI	CTGAAG	3 cut(s)	735, 1053, 1101
AfaI	GTAC	2 cut(s)	1372, 1514
AfiI	CCNNNNNNNGG	4 cut(s)	386, 586, 920, 1464
AflII	CTTAAG	1 cut(s)	1592
AgsI	TTSAA	9 cut(s)	151, 176, 192, 398, 422, 505, 675, 813, 1217
AjnI	CCWGG	4 cut(s)	599, 1069, 1149, 1503
AluBI	AGCT	9 cut(s)	41, 118, 304, 465, 1109, 1231, 1352, 1464, 1640
AluI	AGCT	9 cut(s)	41, 118, 304, 465, 1109, 1231, 1352, 1464, 1640
Alw21I	GWGCWC	1 cut(s)	169
Alw26I	GTCTC	6 cut(s)	61, 96, 686, 1253, 1299, 1306
AlwI	GGATC	5 cut(s)	76, 350, 571, 945, 958
AlwNI	CAGNNNCTG	3 cut(s)	638, 1500, 1585
Ama87I	CYCGRG	2 cut(s)	244, 895
AoxI	GGCC	4 cut(s)	180, 194, 1067, 1279
ApoI	RAATTY	4 cut(s)	416, 424, 1054, 1264
Asp700I	GAANNNNTTC	2 cut(s)	934, 1268
AspS9I	GGNCC	1 cut(s)	962
AsuHPI	GGTGA	1 cut(s)	401
AsuNHI	GCTAGC	2 cut(s)	590, 1198
AvaI	CYCGRG	2 cut(s)	244, 895
AvaII	GGWCC	1 cut(s)	962
AxyI	CCTNAGG	1 cut(s)	1415
BaeGI	GKGCMC	1 cut(s)	1607
BamHI	GGATCC	1 cut(s)	950
BanI	GGYRCC	1 cut(s)	1602
BanII	GRGCYC	1 cut(s)	54
Bbv12I	GWGCWC	1 cut(s)	169
BccI	CCATC	8 cut(s)	41, 445, 584, 1148, 1172, 1360, 1463, 1657
BciT130I	CCWGG	4 cut(s)	601, 1071, 1151, 1505
BclI	TGATCA	1 cut(s)	1294
BcoDI	GTCTC	6 cut(s)	61, 96, 686, 1253, 1299, 1306
BfaI	CTAG	7 cut(s)	435, 473, 591, 786, 1008, 1199, 1355
BfmI	CTRYAG	2 cut(s)	121, 957
BfrI	CTTAAG	1 cut(s)	1592
BfuAI	ACCTGC	1 cut(s)	950
BglI	GCCNNNNNGGC	1 cut(s)	1071
BglII	AGATCT	2 cut(s)	488, 512
BlpI	GCTNAGC	1 cut(s)	114
Bme1390I	CCNGG	4 cut(s)	601, 1071, 1151, 1505
Bme18I	GGWCC	1 cut(s)	962
BmeT110I	CYCGRG	2 cut(s)	244, 895
BmgT120I	GGNCC	1 cut(s)	962
BmiI	GGNNCC	4 cut(s)	931, 952, 1148, 1604
BmrFI	CCNGG	4 cut(s)	601, 1071, 1151, 1505
BmrI	ACTGGG	1 cut(s)	774
BmsI	GCATC	6 cut(s)	485, 804, 869, 1434, 1441, 1463
BmtI	GCTAGC	2 cut(s)	594, 1202
BmuI	ACTGGG	1 cut(s)	774
BpmI	CTGGAG	2 cut(s)	1542, 1626
Bpu10I	CCTNAGC	1 cut(s)	738
Bpu1102I	GCTNAGC	1 cut(s)	114
BpuEI	CTTGAG	2 cut(s)	1226, 1277
BsaAI	YACGTR	1 cut(s)	1516
BsaI	GGTCTC	2 cut(s)	96, 686
BsaJI	CCNNGG	2 cut(s)	679, 790
BsaXI	ACNNNNNCTCC	2 cut(s)	1515, 1545
Bsc4I	CCNNNNNNNGG	4 cut(s)	386, 586, 920, 1464
Bse118I	RCCGGY	2 cut(s)	126, 1065
Bse1I	ACTGG	8 cut(s)	197, 339, 654, 780, 892, 945, 1320, 1579
Bse21I	CCTNAGG	1 cut(s)	1415
Bse3DI	GCAATG	3 cut(s)	115, 282, 1385
BseBI	CCWGG	4 cut(s)	601, 1071, 1151, 1505
BseDI	CCNNGG	2 cut(s)	679, 790
BseLI	CCNNNNNNNGG	4 cut(s)	386, 586, 920, 1464
BseMI	GCAATG	3 cut(s)	115, 282, 1385
BseMII	CTCAG	2 cut(s)	128, 645
BseNI	ACTGG	8 cut(s)	197, 339, 654, 780, 892, 945, 1320, 1579
BseSI	GKGCMC	1 cut(s)	1607
BseYI	CCCAGC	2 cut(s)	130, 1464
BsgI	GTGCAG	1 cut(s)	544
BshFI	GGCC	4 cut(s)	182, 196, 1069, 1281
BshNI	GGYRCC	1 cut(s)	1602
BsiHKAI	GWGCWC	1 cut(s)	169
BsiHKCI	CYCGRG	2 cut(s)	244, 895
BsiSI	CCGG	2 cut(s)	127, 1066
BslFI	GGGAC	2 cut(s)	632, 1099
BslI	CCNNNNNNNGG	4 cut(s)	386, 586, 920, 1464
BsmAI	GTCTC	6 cut(s)	61, 96, 686, 1253, 1299, 1306
BsmBI	CGTCTC	2 cut(s)	61, 1253
BsmFI	GGGAC	2 cut(s)	632, 1099
BsmI	GAATGC	2 cut(s)	1006, 1098
BsnI	GGCC	4 cut(s)	182, 196, 1069, 1281
Bso31I	GGTCTC	2 cut(s)	96, 686
BsoBI	CYCGRG	2 cut(s)	244, 895
Bsp1286I	GDGCHC	3 cut(s)	54, 169, 1607
Bsp143I	GATC	8 cut(s)	5, 68, 355, 488, 512, 563, 950, 1294
Bsp1720I	GCTNAGC	1 cut(s)	114
Bsp19I	CCATGG	1 cut(s)	790
BspACI	CCGC	5 cut(s)	106, 1135, 1481, 1543, 1588
BspANI	GGCC	4 cut(s)	182, 196, 1069, 1281
BspCNI	CTCAG	2 cut(s)	127, 644
BspLI	GGNNCC	4 cut(s)	931, 952, 1148, 1604
BspMAI	CTGCAG	1 cut(s)	961
BspMI	ACCTGC	1 cut(s)	950
BspOI	GCTAGC	2 cut(s)	594, 1202
BspPI	GGATC	5 cut(s)	76, 350, 571, 945, 958
BspQI	GCTCTTC	2 cut(s)	214, 1221
BspT107I	GGYRCC	1 cut(s)	1602
BspTI	CTTAAG	1 cut(s)	1592
BspTNI	GGTCTC	2 cut(s)	96, 686
BsrBI	CCGCTC	1 cut(s)	1137
BsrDI	GCAATG	3 cut(s)	115, 282, 1385
BsrFI	RCCGGY	2 cut(s)	126, 1065
BsrI	ACTGG	8 cut(s)	197, 339, 654, 780, 892, 945, 1320, 1579
BssAI	RCCGGY	2 cut(s)	126, 1065
BssECI	CCNNGG	2 cut(s)	679, 790
BssMI	GATC	8 cut(s)	5, 68, 355, 488, 512, 563, 950, 1294
BssT1I	CCWWGG	2 cut(s)	679, 790
Bst2UI	CCWGG	4 cut(s)	601, 1071, 1151, 1505
Bst4CI	ACNGT	3 cut(s)	883, 1023, 1375
Bst6I	CTCTTC	5 cut(s)	214, 811, 1221, 1353, 1503
BstAFI	CTTAAG	1 cut(s)	1592
BstAPI	GCANNNNNTGC	1 cut(s)	1500
BstBAI	YACGTR	1 cut(s)	1516
BstC8I	GCNNGC	6 cut(s)	128, 592, 1067, 1107, 1200, 1550
BstDEI	CTNAG	6 cut(s)	114, 620, 631, 738, 1142, 1415
BstDSI	CCRYGG	1 cut(s)	790
BstENI	CCTNNNNNAGG	1 cut(s)	918
BstKTI	GATC	8 cut(s)	8, 71, 358, 491, 515, 566, 953, 1297
BstMAI	GTCTC	6 cut(s)	61, 96, 686, 1253, 1299, 1306
BstMBI	GATC	8 cut(s)	5, 68, 355, 488, 512, 563, 950, 1294
BstNI	CCWGG	4 cut(s)	601, 1071, 1151, 1505
BstSCI	CCNGG	4 cut(s)	599, 1069, 1149, 1503
BstSFI	CTRYAG	2 cut(s)	121, 957
BstSLI	GKGCMC	1 cut(s)	1607
BstX2I	RGATCY	5 cut(s)	68, 488, 512, 563, 950
BstYI	RGATCY	5 cut(s)	68, 488, 512, 563, 950
Bsu36I	CCTNAGG	1 cut(s)	1415
BsuRI	GGCC	4 cut(s)	182, 196, 1069, 1281
BtgI	CCRYGG	1 cut(s)	790
BtgZI	GCGATG	1 cut(s)	1635
BtsI	GCAGTG	1 cut(s)	1087
BtsIMutI	CAGTG	4 cut(s)	885, 952, 1087, 1586
BveI	ACCTGC	1 cut(s)	950
Cac8I	GCNNGC	6 cut(s)	128, 592, 1067, 1107, 1200, 1550
CaiI	CAGNNNCTG	3 cut(s)	638, 1500, 1585
Cfr10I	RCCGGY	2 cut(s)	126, 1065
Cfr13I	GGNCC	1 cut(s)	962
CseI	GACGC	1 cut(s)	1173
Csp6I	GTAC	2 cut(s)	1371, 1513
CviAII	CATG	6 cut(s)	16, 791, 1094, 1174, 1309, 1330
CviQI	GTAC	2 cut(s)	1371, 1513
DdeI	CTNAG	6 cut(s)	114, 620, 631, 738, 1142, 1415
DpnI	GATC	8 cut(s)	7, 70, 357, 490, 514, 565, 952, 1296
DpnII	GATC	8 cut(s)	5, 68, 355, 488, 512, 563, 950, 1294
EaeI	YGGCCR	1 cut(s)	1067
Eam1104I	CTCTTC	5 cut(s)	214, 811, 1221, 1353, 1503
EarI	CTCTTC	5 cut(s)	214, 811, 1221, 1353, 1503
EciI	GGCGGA	1 cut(s)	1496
Eco130I	CCWWGG	2 cut(s)	679, 790
Eco24I	GRGCYC	1 cut(s)	54
Eco31I	GGTCTC	2 cut(s)	96, 686
Eco32I	GATATC	1 cut(s)	1321
Eco47I	GGWCC	1 cut(s)	962
Eco57I	CTGAAG	3 cut(s)	735, 1053, 1101
Eco81I	CCTNAGG	1 cut(s)	1415
Eco88I	CYCGRG	2 cut(s)	244, 895
EcoNI	CCTNNNNNAGG	1 cut(s)	918
EcoRI	GAATTC	1 cut(s)	1054
EcoRII	CCWGG	4 cut(s)	599, 1069, 1149, 1503
EcoRV	GATATC	1 cut(s)	1321
EcoT14I	CCWWGG	2 cut(s)	679, 790
EcoT22I	ATGCAT	1 cut(s)	1456
EcoT38I	GRGCYC	1 cut(s)	54
ErhI	CCWWGG	2 cut(s)	679, 790
Esp3I	CGTCTC	2 cut(s)	61, 1253
FaeI	CATG	6 cut(s)	19, 794, 1097, 1177, 1312, 1333
FaqI	GGGAC	2 cut(s)	632, 1099
FatI	CATG	6 cut(s)	15, 790, 1093, 1173, 1308, 1329
FauI	CCCGC	1 cut(s)	1142
FauNDI	CATATG	1 cut(s)	1336
FbaI	TGATCA	1 cut(s)	1294
FriOI	GRGCYC	1 cut(s)	54
FspBI	CTAG	7 cut(s)	435, 473, 591, 786, 1008, 1199, 1355
GsaI	CCCAGC	2 cut(s)	134, 1468
GsuI	CTGGAG	2 cut(s)	1542, 1626
HaeIII	GGCC	4 cut(s)	182, 196, 1069, 1281
HapII	CCGG	2 cut(s)	127, 1066
HgaI	GACGC	1 cut(s)	1173
Hin1II	CATG	6 cut(s)	19, 794, 1097, 1177, 1312, 1333
HinfI	GANTC	7 cut(s)	326, 394, 533, 545, 671, 809, 871
HpaII	CCGG	2 cut(s)	127, 1066
HphI	GGTGA	1 cut(s)	401
Hpy166II	GTNNAC	3 cut(s)	965, 1437, 1576
Hpy188III	TCNNGA	9 cut(s)	350, 359, 492, 516, 580, 813, 1256, 1273, 1355
Hpy8I	GTNNAC	3 cut(s)	965, 1437, 1576
Hpy99I	CGWCG	1 cut(s)	1167
HpyAV	CCTTC	7 cut(s)	198, 489, 660, 710, 843, 897, 1471
HpyCH4III	ACNGT	3 cut(s)	883, 1023, 1375
HpyCH4IV	ACGT	4 cut(s)	642, 971, 1515, 1563
HpyCH4V	TGCA	8 cut(s)	287, 297, 525, 860, 959, 1454, 1494, 1614
HpyF3I	CTNAG	6 cut(s)	114, 620, 631, 738, 1142, 1415
HpySE526I	ACGT	4 cut(s)	642, 971, 1515, 1563
Hsp92II	CATG	6 cut(s)	19, 794, 1097, 1177, 1312, 1333
KroI	GCCGGC	2 cut(s)	126, 1065
KroNI	GCCGGC	2 cut(s)	128, 1067
Ksp22I	TGATCA	1 cut(s)	1294
Kzo9I	GATC	8 cut(s)	5, 68, 355, 488, 512, 563, 950, 1294
LguI	GCTCTTC	2 cut(s)	214, 1221
LmnI	GCTCC	3 cut(s)	382, 1619, 1645
LweI	GCATC	6 cut(s)	485, 804, 869, 1434, 1441, 1463
MaeI	CTAG	7 cut(s)	435, 473, 591, 786, 1008, 1199, 1355
MaeII	ACGT	4 cut(s)	642, 971, 1515, 1563
MaeIII	GTNAC	4 cut(s)	442, 626, 883, 890
MalI	GATC	8 cut(s)	7, 70, 357, 490, 514, 565, 952, 1296
MbiI	CCGCTC	1 cut(s)	1137
MboI	GATC	8 cut(s)	5, 68, 355, 488, 512, 563, 950, 1294
MfeI	CAATTG	1 cut(s)	1408
MflI	RGATCY	5 cut(s)	68, 488, 512, 563, 950
MhlI	GDGCHC	3 cut(s)	54, 169, 1607
MlyI	GAGTC	1 cut(s)	865
MmeI	TCCRAC	2 cut(s)	665, 1513
Mph1103I	ATGCAT	1 cut(s)	1456
MroNI	GCCGGC	2 cut(s)	126, 1065
MroXI	GAANNNNTTC	2 cut(s)	934, 1268
MseI	TTAA	4 cut(s)	83, 611, 1043, 1593
MslI	CAYNNNNRTG	1 cut(s)	449
MspCI	CTTAAG	1 cut(s)	1592
MspI	CCGG	2 cut(s)	127, 1066
MspR9I	CCNGG	4 cut(s)	601, 1071, 1151, 1505
MunI	CAATTG	1 cut(s)	1408
Mva1269I	GAATGC	2 cut(s)	1006, 1098
MvaI	CCWGG	4 cut(s)	601, 1071, 1151, 1505
NaeI	GCCGGC	2 cut(s)	128, 1067
NcoI	CCATGG	1 cut(s)	790
NdeI	CATATG	1 cut(s)	1336
NdeII	GATC	8 cut(s)	5, 68, 355, 488, 512, 563, 950, 1294
NgoMIV	GCCGGC	2 cut(s)	126, 1065
NheI	GCTAGC	2 cut(s)	590, 1198
NlaIII	CATG	6 cut(s)	19, 794, 1097, 1177, 1312, 1333
NlaIV	GGNNCC	4 cut(s)	931, 952, 1148, 1604
NmuCI	GTSAC	3 cut(s)	442, 883, 890
NsiI	ATGCAT	1 cut(s)	1456
PaeR7I	CTCGAG	2 cut(s)	244, 895
PciSI	GCTCTTC	2 cut(s)	214, 1221
PcsI	WCGNNNNNNNCGW	1 cut(s)	1569
PctI	GAATGC	2 cut(s)	1006, 1098
PdiI	GCCGGC	2 cut(s)	128, 1067
PdmI	GAANNNNTTC	2 cut(s)	934, 1268
PfeI	GAWTC	6 cut(s)	326, 394, 533, 545, 671, 809
PflFI	GACNNNGTC	1 cut(s)	644
PflMI	CCANNNNNTGG	1 cut(s)	386
PleI	GAGTC	1 cut(s)	865
PpsI	GAGTC	1 cut(s)	865
Ppu21I	YACGTR	1 cut(s)	1516
Psp6I	CCWGG	4 cut(s)	599, 1069, 1149, 1503
PspFI	CCCAGC	2 cut(s)	130, 1464
PspGI	CCWGG	4 cut(s)	599, 1069, 1149, 1503
PspN4I	GGNNCC	4 cut(s)	931, 952, 1148, 1604
PspPI	GGNCC	1 cut(s)	962
PspXI	VCTCGAGB	2 cut(s)	244, 895
PstI	CTGCAG	1 cut(s)	961
PstNI	CAGNNNCTG	3 cut(s)	638, 1500, 1585
PsuI	RGATCY	5 cut(s)	68, 488, 512, 563, 950
PsyI	GACNNNGTC	1 cut(s)	644
RsaI	GTAC	2 cut(s)	1372, 1514
RsaNI	GTAC	2 cut(s)	1371, 1513
RseI	CAYNNNNRTG	1 cut(s)	449
SapI	GCTCTTC	2 cut(s)	214, 1221
SaqAI	TTAA	4 cut(s)	83, 611, 1043, 1593
Sau3AI	GATC	8 cut(s)	5, 68, 355, 488, 512, 563, 950, 1294
Sau96I	GGNCC	1 cut(s)	962
SchI	GAGTC	1 cut(s)	865
ScrFI	CCNGG	4 cut(s)	601, 1071, 1151, 1505
SduI	GDGCHC	3 cut(s)	54, 169, 1607
SfaNI	GCATC	6 cut(s)	485, 804, 869, 1434, 1441, 1463
SfcI	CTRYAG	2 cut(s)	121, 957
Sfr274I	CTCGAG	2 cut(s)	244, 895
SinI	GGWCC	1 cut(s)	962
SlaI	CTCGAG	2 cut(s)	244, 895
SmiMI	CAYNNNNRTG	1 cut(s)	449
SmlI	CTYRAG	5 cut(s)	244, 895, 1205, 1256, 1592
SmoI	CTYRAG	5 cut(s)	244, 895, 1205, 1256, 1592
SsiI	CCGC	5 cut(s)	106, 1135, 1481, 1543, 1588
SspMI	CTAG	7 cut(s)	435, 473, 591, 786, 1008, 1199, 1355
StyD4I	CCNGG	4 cut(s)	599, 1069, 1149, 1503
StyI	CCWWGG	2 cut(s)	679, 790
TaaI	ACNGT	3 cut(s)	883, 1023, 1375
TaiI	ACGT	4 cut(s)	645, 974, 1518, 1566
TaqI	TCGA	5 cut(s)	245, 493, 896, 998, 1323
TauI	GCSGC	1 cut(s)	1591
TfiI	GAWTC	6 cut(s)	326, 394, 533, 545, 671, 809
Tru1I	TTAA	4 cut(s)	83, 611, 1043, 1593
Tru9I	TTAA	4 cut(s)	83, 611, 1043, 1593
TscAI	CASTG	4 cut(s)	892, 952, 1087, 1586
TseFI	GTSAC	3 cut(s)	442, 883, 890
Tsp45I	GTSAC	3 cut(s)	442, 883, 890
TspDTI	ATGAA	6 cut(s)	318, 651, 767, 1002, 1239, 1542
TspGWI	ACGGA	1 cut(s)	1447
TspRI	CASTG	4 cut(s)	892, 952, 1087, 1586
Tth111I	GACNNNGTC	1 cut(s)	644
Van91I	CCANNNNNTGG	1 cut(s)	386
Vha464I	CTTAAG	1 cut(s)	1592
VpaK11BI	GGWCC	1 cut(s)	962
XagI	CCTNNNNNAGG	1 cut(s)	918
XapI	RAATTY	4 cut(s)	416, 424, 1054, 1264
XbaI	TCTAGA	1 cut(s)	1354
XhoI	CTCGAG	2 cut(s)	244, 895
XmnI	GAANNNNTTC	2 cut(s)	934, 1268
XspI	CTAG	7 cut(s)	435, 473, 591, 786, 1008, 1199, 1355
Zsp2I	ATGCAT	1 cut(s)	1456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.