Rh6BG453000

Ring finger domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
66666521 .. 66670836
4316 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG453000.1

Sequence Viewer

Length: 1275 bp
ATGGATGAGTATTCCGGTAAAAGAGCTAGTGATGGACTTGTCTCTAGAAAGGGGCCTAGTCTTGTTTTGAGGGAAACTCCAAACAGAGATCGTAATGCTCAGGTCTGCAGCCGACTGGGATGCAGTGGAAGACTGAATTCTGTGAAAGGTGCTCAAATTGAAAAGGCCAAATCTTCAAAGCCTGCATTCCGCTCTTCTTCAAATGGGAAAGAGATAGTTGGAAGTTCCTCTAGGTCTTGCATTTCTGTTGGCAACTCAAGAAAATCCGGTAGAGAACCTTGCAAAAAGCTATCTTCTAATTTGGAAACAGATTCATCTGAAACCAGCAGTGTTCAGGATGATCCAGAAGTGTCAGATGTCACTCCTCCACCTGGAAAGATTCAGAGAGGGCTTCACCCTGAATCTAAAAATGGGGAGTCTAGTGAAGTCTCCTTGATGGAAGTTGGAAGCTCCGATGTATCATCAAATACAAGATCCCGGAGAAATTTCAATCAGAGAACTGGATTGCGGAACCAAGAAACTTTATTGGGTTCTTCTGTTCCTTTCGGATCTAAAAACAACATCCAGACAACACGAGCTAGCACAACCAGGAATGGCTTAAGAAATCTAAGGTGCAATTCAGTATCTGATGTTGTTCCGTCCAGTTGTTCATCATCAGACTCGAGCGTCAACAGGAGGGAGACCCTAAAGAAAAGAATTTCTGAAGGAGAAAGTAGCTCAGCTGCTAAGGGGAAGAAGATGAATGGGTCATCTTCTGGGCAAAACTCCAATTCGAGTCATGGAATCTCAATTGCTGATTCAAGAAGAGGTAGAAATATACCTCCTAACAGGGATAATGGTGTCGCGTCGGTTAGGACTCGGAGAACTGTTACTGGTCACACAAGGGCTAGGATTTCTAATCAAGGAAGTGGAAACAATATGTCAAGCAATGGATCTTCTGCAGTTGGCCCTCATATGTCTCAACCTGAGATGTCTATCGATATGAATTGTGCTAGTTCATCACAACACTTATCTTCTGAAGCTCCTTTAAATCGGCCAAATTCTTATAGTAGACCAGGTAGTAGCAGTAGACCAGGTAGTGGCAGTGGGAGTTTACATGGCATGATGCGATCTGGTACTGCAGATATTGGTTTTTCCCGGTCTCTTATGAATCAGGATGGTCAGCGACGCTACAACATGGATGGAATTGCAGAGGTATTGTGCAAAAATATTAATGTACATCTTATCATATCATTTACAAGGTTTTCCTTGCTTCCCTGGTGTGGAGATTTGTAA

Protein Analysis

424

Amino Acids

45.27

Weight (kDa)

10.23

Isoelectric Point (pI)

57.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 665
AccB7I CCANNNNNTGG 1 cut(s) 1079
AccBSI CCGCTC 1 cut(s) 192
AccI GTMKAC 2 cut(s) 1051, 1069
AccII CGCG 1 cut(s) 845
AciI CCGC 2 cut(s) 190, 508
AclWI GGATC 4 cut(s) 335, 468, 556, 940
AcoI YGGCCR 1 cut(s) 1034
AcsI RAATTY 4 cut(s) 136, 484, 696, 1039
AcuI CTGAAG 2 cut(s) 723, 1038
AfaI GTAC 2 cut(s) 1117, 1218
AfiI CCNNNNNNNGG 3 cut(s) 371, 1079, 1262
AflII CTTAAG 1 cut(s) 598
AgsI TTSAA 5 cut(s) 161, 177, 201, 490, 801
AjnI CCWGG 5 cut(s) 370, 587, 1054, 1072, 1256
AluBI AGCT 7 cut(s) 26, 289, 450, 578, 717, 722, 1022
AluI AGCT 7 cut(s) 26, 289, 450, 578, 717, 722, 1022
Alw21I GWGCWC 1 cut(s) 154
Alw26I GTCTC 5 cut(s) 46, 433, 674, 963, 1146
AlwI GGATC 4 cut(s) 335, 468, 556, 940
AlwNI CAGNNNCTG 1 cut(s) 626
Ama87I CYCGRG 1 cut(s) 661
AoxI GGCC 4 cut(s) 53, 165, 946, 1034
ApeKI GCWGC 2 cut(s) 108, 722
ApoI RAATTY 4 cut(s) 136, 484, 696, 1039
AseI ATTAAT 1 cut(s) 1212
AspS9I GGNCC 2 cut(s) 53, 947
AsuC2I CCSGG 2 cut(s) 478, 1138
AsuHPI GGTGA 1 cut(s) 386
AsuNHI GCTAGC 1 cut(s) 578
AvaI CYCGRG 1 cut(s) 661
BauI CACGAG 1 cut(s) 573
BbsI GAAGAC 1 cut(s) 136
Bbv12I GWGCWC 1 cut(s) 154
BbvI GCAGC 2 cut(s) 120, 709
BccI CCATC 4 cut(s) 26, 430, 1151, 1175
BcgI CGANNNNNNTGC 2 cut(s) 102, 136
BciT130I CCWGG 5 cut(s) 372, 589, 1056, 1074, 1258
BcnI CCSGG 2 cut(s) 478, 1138
BcoDI GTCTC 5 cut(s) 46, 433, 674, 963, 1146
BfaI CTAG 8 cut(s) 27, 45, 57, 231, 420, 579, 888, 993
BfmI CTRYAG 3 cut(s) 106, 939, 1119
BfrI CTTAAG 1 cut(s) 598
BisI GCNGC 2 cut(s) 109, 723
BlpI GCTNAGC 1 cut(s) 718
BlsI GCNGC 2 cut(s) 110, 724
Bme1390I CCNGG 7 cut(s) 372, 478, 589, 1056, 1074, 1138, 1258
BmeT110I CYCGRG 1 cut(s) 661
BmgT120I GGNCC 2 cut(s) 53, 947
BmiI GGNNCC 2 cut(s) 54, 512
BmrFI CCNGG 7 cut(s) 372, 478, 589, 1056, 1074, 1138, 1258
BmrI ACTGGG 1 cut(s) 125
BmsI GCATC 2 cut(s) 110, 1095
BmtI GCTAGC 1 cut(s) 582
BmuI ACTGGG 1 cut(s) 125
BpiI GAAGAC 1 cut(s) 136
BplI GAGNNNNNCTC 2 cut(s) 61, 93
Bpu10I CCTNAGC 2 cut(s) 99, 726
Bpu1102I GCTNAGC 1 cut(s) 718
BpuEI CTTGAG 1 cut(s) 241
BpuMI CCSGG 2 cut(s) 478, 1138
Bsa29I ATCGAT 1 cut(s) 978
BsaBI GATNNNNATC 1 cut(s) 974
BsaI GGTCTC 2 cut(s) 674, 1146
BsaJI CCNNGG 1 cut(s) 1256
BsaWI WCCGGW 2 cut(s) 14, 266
Bsc4I CCNNNNNNNGG 3 cut(s) 371, 1079, 1262
Bse1I ACTGG 4 cut(s) 120, 505, 642, 877
Bse3DI GCAATG 1 cut(s) 934
Bse8I GATNNNNATC 1 cut(s) 974
BseBI CCWGG 5 cut(s) 372, 589, 1056, 1074, 1258
BseCI ATCGAT 1 cut(s) 978
BseDI CCNNGG 1 cut(s) 1256
BseGI GGATG 6 cut(s) 10, 125, 343, 561, 1162, 1186
BseJI GATNNNNATC 1 cut(s) 974
BseLI CCNNNNNNNGG 3 cut(s) 371, 1079, 1262
BseMI GCAATG 1 cut(s) 934
BseMII CTCAG 3 cut(s) 113, 732, 957
BseNI ACTGG 4 cut(s) 120, 505, 642, 877
BseRI GAGGAG 1 cut(s) 354
BseXI GCAGC 2 cut(s) 120, 709
Bsh1236I CGCG 1 cut(s) 845
BshFI GGCC 4 cut(s) 55, 167, 948, 1036
BshVI ATCGAT 1 cut(s) 978
BsiHKAI GWGCWC 1 cut(s) 154
BsiHKCI CYCGRG 1 cut(s) 661
BsiSI CCGG 4 cut(s) 15, 267, 478, 1138
BslI CCNNNNNNNGG 3 cut(s) 371, 1079, 1262
BsmAI GTCTC 5 cut(s) 46, 433, 674, 963, 1146
BsmI GAATGC 1 cut(s) 185
BsnI GGCC 4 cut(s) 55, 167, 948, 1036
Bso31I GGTCTC 2 cut(s) 674, 1146
BsoBI CYCGRG 1 cut(s) 661
Bsp1286I GDGCHC 1 cut(s) 154
Bsp1407I TGTACA 1 cut(s) 1216
Bsp143I GATC 6 cut(s) 88, 340, 473, 548, 932, 1109
Bsp1720I GCTNAGC 1 cut(s) 718
BspACI CCGC 2 cut(s) 190, 508
BspANI GGCC 4 cut(s) 55, 167, 948, 1036
BspCNI CTCAG 3 cut(s) 112, 731, 958
BspDI ATCGAT 1 cut(s) 978
BspFNI CGCG 1 cut(s) 845
BspLI GGNNCC 2 cut(s) 54, 512
BspMAI CTGCAG 3 cut(s) 110, 943, 1123
BspOI GCTAGC 1 cut(s) 582
BspPI GGATC 4 cut(s) 335, 468, 556, 940
BspQI GCTCTTC 1 cut(s) 199
BspTI CTTAAG 1 cut(s) 598
BspTNI GGTCTC 2 cut(s) 674, 1146
BsrBI CCGCTC 1 cut(s) 192
BsrDI GCAATG 1 cut(s) 934
BsrGI TGTACA 1 cut(s) 1216
BsrI ACTGG 4 cut(s) 120, 505, 642, 877
BssECI CCNNGG 1 cut(s) 1256
BssMI GATC 6 cut(s) 88, 340, 473, 548, 932, 1109
BssSI CACGAG 1 cut(s) 573
Bst2BI CACGAG 1 cut(s) 573
Bst2UI CCWGG 5 cut(s) 372, 589, 1056, 1074, 1258
Bst4CI ACNGT 1 cut(s) 868
Bst6I CTCTTC 2 cut(s) 199, 799
BstAFI CTTAAG 1 cut(s) 598
BstAUI TGTACA 1 cut(s) 1216
BstC8I GCNNGC 2 cut(s) 183, 580
BstDEI CTNAG 5 cut(s) 99, 608, 718, 726, 966
BstF5I GGATG 6 cut(s) 10, 125, 343, 561, 1162, 1186
BstFNI CGCG 1 cut(s) 845
BstKTI GATC 6 cut(s) 91, 343, 476, 551, 935, 1112
BstMAI GTCTC 5 cut(s) 46, 433, 674, 963, 1146
BstMBI GATC 6 cut(s) 88, 340, 473, 548, 932, 1109
BstNI CCWGG 5 cut(s) 372, 589, 1056, 1074, 1258
BstSCI CCNGG 7 cut(s) 370, 476, 587, 1054, 1072, 1136, 1256
BstSFI CTRYAG 3 cut(s) 106, 939, 1119
BstUI CGCG 1 cut(s) 845
BstV1I GCAGC 2 cut(s) 120, 709
BstV2I GAAGAC 1 cut(s) 136
BstX2I RGATCY 3 cut(s) 473, 548, 932
BstYI RGATCY 3 cut(s) 473, 548, 932
Bsu15I ATCGAT 1 cut(s) 978
BsuRI GGCC 4 cut(s) 55, 167, 948, 1036
BsuTUI ATCGAT 1 cut(s) 978
BtsCI GGATG 6 cut(s) 10, 125, 343, 561, 1162, 1186
BtsI GCAGTG 3 cut(s) 130, 334, 1090
BtsIMutI CAGTG 3 cut(s) 130, 334, 1090
Cac8I GCNNGC 2 cut(s) 183, 580
CaiI CAGNNNCTG 1 cut(s) 626
Cfr13I GGNCC 2 cut(s) 53, 947
ClaI ATCGAT 1 cut(s) 978
CseI GACGC 3 cut(s) 655, 834, 1176
CsiI ACCWGGT 2 cut(s) 1054, 1072
Csp6I GTAC 2 cut(s) 1116, 1217
CviAII CATG 4 cut(s) 779, 1097, 1102, 1177
CviQI GTAC 2 cut(s) 1116, 1217
DdeI CTNAG 5 cut(s) 99, 608, 718, 726, 966
DpnI GATC 6 cut(s) 90, 342, 475, 550, 934, 1111
DpnII GATC 6 cut(s) 88, 340, 473, 548, 932, 1109
DraI TTTAAA 1 cut(s) 1029
DrdI GACNNNNNNGTC 1 cut(s) 665
DseDI GACNNNNNNGTC 1 cut(s) 665
EaeI YGGCCR 1 cut(s) 1034
Eam1104I CTCTTC 2 cut(s) 199, 799
EarI CTCTTC 2 cut(s) 199, 799
Eco31I GGTCTC 2 cut(s) 674, 1146
Eco57I CTGAAG 2 cut(s) 723, 1038
Eco88I CYCGRG 1 cut(s) 661
EcoO109I RGGNCCY 1 cut(s) 53
EcoRI GAATTC 1 cut(s) 136
EcoRII CCWGG 5 cut(s) 370, 587, 1054, 1072, 1256
FaeI CATG 4 cut(s) 782, 1100, 1105, 1180
FatI CATG 4 cut(s) 778, 1096, 1101, 1176
FauNDI CATATG 1 cut(s) 954
FblI GTMKAC 2 cut(s) 1051, 1069
Fnu4HI GCNGC 2 cut(s) 109, 723
FokI GGATG 6 cut(s) 17, 132, 350, 548, 1169, 1193
Fsp4HI GCNGC 2 cut(s) 109, 723
FspBI CTAG 8 cut(s) 27, 45, 57, 231, 420, 579, 888, 993
GluI GCNGC 2 cut(s) 109, 723
HaeIII GGCC 4 cut(s) 55, 167, 948, 1036
HapII CCGG 4 cut(s) 15, 267, 478, 1138
HgaI GACGC 3 cut(s) 655, 834, 1176
Hin1II CATG 4 cut(s) 782, 1100, 1105, 1180
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HpaII CCGG 4 cut(s) 15, 267, 478, 1138
HphI GGTGA 1 cut(s) 386
Hpy166II GTNNAC 4 cut(s) 670, 1052, 1070, 1094
Hpy188III TCNNGA 7 cut(s) 45, 258, 335, 344, 565, 801, 1154
Hpy8I GTNNAC 4 cut(s) 670, 1052, 1070, 1094
Hpy99I CGWCG 2 cut(s) 850, 1170
HpyAV CCTTC 1 cut(s) 698
HpyCH4III ACNGT 1 cut(s) 868
HpyF3I CTNAG 5 cut(s) 99, 608, 718, 726, 966
Hsp92II CATG 4 cut(s) 782, 1100, 1105, 1180
Kzo9I GATC 6 cut(s) 88, 340, 473, 548, 932, 1109
LguI GCTCTTC 1 cut(s) 199
LmnI GCTCC 2 cut(s) 455, 1027
Lsp1109I GCAGC 2 cut(s) 120, 709
LweI GCATC 2 cut(s) 110, 1095
MabI ACCWGGT 2 cut(s) 1054, 1072
MaeI CTAG 8 cut(s) 27, 45, 57, 231, 420, 579, 888, 993
MaeIII GTNAC 3 cut(s) 358, 868, 875
MalI GATC 6 cut(s) 90, 342, 475, 550, 934, 1111
MbiI CCGCTC 1 cut(s) 192
MboI GATC 6 cut(s) 88, 340, 473, 548, 932, 1109
MfeI CAATTG 1 cut(s) 789
MflI RGATCY 3 cut(s) 473, 548, 932
MhlI GDGCHC 1 cut(s) 154
MlyI GAGTC 4 cut(s) 425, 653, 784, 850
MmeI TCCRAC 2 cut(s) 199, 424
MnlI CCTC 9 cut(s) 63, 238, 375, 380, 669, 800, 831, 960, 1186
MseI TTAA 3 cut(s) 599, 1028, 1212
MspA1I CMGCKG 1 cut(s) 722
MspCI CTTAAG 1 cut(s) 598
MspI CCGG 4 cut(s) 15, 267, 478, 1138
MspR9I CCNGG 7 cut(s) 372, 478, 589, 1056, 1074, 1138, 1258
MunI CAATTG 1 cut(s) 789
Mva1269I GAATGC 1 cut(s) 185
MvaI CCWGG 5 cut(s) 372, 589, 1056, 1074, 1258
MvnI CGCG 1 cut(s) 845
NciI CCSGG 2 cut(s) 478, 1138
NdeI CATATG 1 cut(s) 954
NdeII GATC 6 cut(s) 88, 340, 473, 548, 932, 1109
NheI GCTAGC 1 cut(s) 578
NlaIII CATG 4 cut(s) 782, 1100, 1105, 1180
NlaIV GGNNCC 2 cut(s) 54, 512
NmuCI GTSAC 2 cut(s) 358, 875
PaeR7I CTCGAG 1 cut(s) 661
PciSI GCTCTTC 1 cut(s) 199
PctI GAATGC 1 cut(s) 185
PfeI GAWTC 6 cut(s) 311, 379, 401, 783, 797, 1150
PflMI CCANNNNNTGG 1 cut(s) 1079
PfoI TCCNGGA 1 cut(s) 476
PkrI GCNGC 2 cut(s) 110, 724
PleI GAGTC 4 cut(s) 424, 653, 783, 850
PpsI GAGTC 4 cut(s) 424, 653, 783, 850
PshBI ATTAAT 1 cut(s) 1212
Psp6I CCWGG 5 cut(s) 370, 587, 1054, 1072, 1256
PspGI CCWGG 5 cut(s) 370, 587, 1054, 1072, 1256
PspN4I GGNNCC 2 cut(s) 54, 512
PspPI GGNCC 2 cut(s) 53, 947
PspXI VCTCGAGB 1 cut(s) 661
PstI CTGCAG 3 cut(s) 110, 943, 1123
PstNI CAGNNNCTG 1 cut(s) 626
PsuI RGATCY 3 cut(s) 473, 548, 932
PvuII CAGCTG 1 cut(s) 722
RsaI GTAC 2 cut(s) 1117, 1218
RsaNI GTAC 2 cut(s) 1116, 1217
SapI GCTCTTC 1 cut(s) 199
SaqAI TTAA 3 cut(s) 599, 1028, 1212
SatI GCNGC 2 cut(s) 109, 723
Sau3AI GATC 6 cut(s) 88, 340, 473, 548, 932, 1109
Sau96I GGNCC 2 cut(s) 53, 947
SchI GAGTC 4 cut(s) 425, 653, 784, 850
ScrFI CCNGG 7 cut(s) 372, 478, 589, 1056, 1074, 1138, 1258
SduI GDGCHC 1 cut(s) 154
SexAI ACCWGGT 2 cut(s) 1054, 1072
SfaNI GCATC 2 cut(s) 110, 1095
SfcI CTRYAG 3 cut(s) 106, 939, 1119
Sfr274I CTCGAG 1 cut(s) 661
SlaI CTCGAG 1 cut(s) 661
SmlI CTYRAG 3 cut(s) 256, 598, 661
SmoI CTYRAG 3 cut(s) 256, 598, 661
SsiI CCGC 2 cut(s) 190, 508
SspI AATATT 1 cut(s) 1210
SspMI CTAG 8 cut(s) 27, 45, 57, 231, 420, 579, 888, 993
StyD4I CCNGG 7 cut(s) 370, 476, 587, 1054, 1072, 1136, 1256
TaaI ACNGT 1 cut(s) 868
TaqI TCGA 3 cut(s) 662, 773, 978
TatI WGTACW 1 cut(s) 1216
TfiI GAWTC 6 cut(s) 311, 379, 401, 783, 797, 1150
Tru1I TTAA 3 cut(s) 599, 1028, 1212
Tru9I TTAA 3 cut(s) 599, 1028, 1212
TscAI CASTG 3 cut(s) 130, 334, 1090
TseFI GTSAC 2 cut(s) 358, 875
TseI GCWGC 2 cut(s) 108, 722
Tsp45I GTSAC 2 cut(s) 358, 875
TspDTI ATGAA 6 cut(s) 303, 639, 755, 987, 998, 1163
TspGWI ACGGA 1 cut(s) 627
TspRI CASTG 3 cut(s) 130, 334, 1090
Van91I CCANNNNNTGG 1 cut(s) 1079
Vha464I CTTAAG 1 cut(s) 598
VspI ATTAAT 1 cut(s) 1212
XapI RAATTY 4 cut(s) 136, 484, 696, 1039
XbaI TCTAGA 1 cut(s) 44
XhoI CTCGAG 1 cut(s) 661
XmiI GTMKAC 2 cut(s) 1051, 1069
XspI CTAG 8 cut(s) 27, 45, 57, 231, 420, 579, 888, 993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.