pycom08g10920

Plasma membrane ATPase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
9156845 .. 9157466
622 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g10920.3

Sequence Viewer

Length: 342 bp
ATGTCCCTCTTGACTTTCTTAAATTCGCAATCCGATACATTCAAAGCGGAAAAGCGTGGAATAATCTTTTGGAGAATAAGAAAGATTTATGGGAAAGAGGAGAGAGAAGCACAGTGGGCTGCAGCACAGAGGACCCTTCACGGTCTTCAGCCACCTGAAACGAACAACCTTTTCAATGAGAAGAACAGTTACAGGGAGCTTTCCGAGATTGCAGAACAAGCGAAGCGGAGGGCTGAGGTTGCAAGGCTTCGGGAGTTGTATATGCTGAAGGGTCATGTTGAGTCAGTTGTGAAGCTGAAAGGACTTGACATCGATACAATTCAACAACATTATACAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

13.28

Weight (kDa)

9.47

Isoelectric Point (pI)

43.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 47, 226
AcsI RAATTY 1 cut(s) 22
AcuI CTGAAG 2 cut(s) 131, 287
AgsI TTSAA 3 cut(s) 43, 175, 323
AjuI GAANNNNNNNTTGG 2 cut(s) 52, 84
AluBI AGCT 2 cut(s) 199, 295
AluI AGCT 2 cut(s) 199, 295
ApeKI GCWGC 2 cut(s) 119, 122
ApoI RAATTY 1 cut(s) 22
AspS9I GGNCC 1 cut(s) 132
AvaII GGWCC 1 cut(s) 132
BarI GAAGNNNNNNTAC 2 cut(s) 173, 205
BbsI GAAGAC 1 cut(s) 137
BbvCI CCTCAGC 1 cut(s) 234
BbvI GCAGC 2 cut(s) 106, 134
BfmI CTRYAG 1 cut(s) 120
BisI GCNGC 2 cut(s) 120, 123
BlsI GCNGC 2 cut(s) 121, 124
Bme18I GGWCC 1 cut(s) 132
BmgT120I GGNCC 1 cut(s) 132
BmiI GGNNCC 1 cut(s) 134
BpiI GAAGAC 1 cut(s) 137
Bpu10I CCTNAGC 1 cut(s) 234
Bsa29I ATCGAT 1 cut(s) 312
BseCI ATCGAT 1 cut(s) 312
BseMII CTCAG 1 cut(s) 225
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 2 cut(s) 106, 134
BshVI ATCGAT 1 cut(s) 312
BspACI CCGC 2 cut(s) 47, 226
BspCNI CTCAG 1 cut(s) 226
BspDI ATCGAT 1 cut(s) 312
BspLI GGNNCC 1 cut(s) 134
BspMAI CTGCAG 1 cut(s) 124
Bst4CI ACNGT 4 cut(s) 114, 143, 188, 337
BstDEI CTNAG 1 cut(s) 234
BstMWI GCNNNNNNNGC 3 cut(s) 116, 218, 239
BstSFI CTRYAG 1 cut(s) 120
BstV1I GCAGC 2 cut(s) 106, 134
BstV2I GAAGAC 1 cut(s) 137
Bsu15I ATCGAT 1 cut(s) 312
BsuTUI ATCGAT 1 cut(s) 312
BtsIMutI CAGTG 1 cut(s) 119
Cfr13I GGNCC 1 cut(s) 132
ClaI ATCGAT 1 cut(s) 312
CviAII CATG 1 cut(s) 275
CviJI RGCY 6 cut(s) 119, 151, 199, 233, 247, 295
CviKI_1 RGCY 6 cut(s) 119, 151, 199, 233, 247, 295
DdeI CTNAG 1 cut(s) 234
Eco47I GGWCC 1 cut(s) 132
Eco57I CTGAAG 2 cut(s) 131, 287
EcoO109I RGGNCCY 1 cut(s) 132
FaeI CATG 1 cut(s) 278
FaiI YATR 5 cut(s) 90, 261, 263, 276, 333
FatI CATG 1 cut(s) 274
Fnu4HI GCNGC 2 cut(s) 120, 123
Fsp4HI GCNGC 2 cut(s) 120, 123
GluI GCNGC 2 cut(s) 120, 123
Hin1II CATG 1 cut(s) 278
HinfI GANTC 1 cut(s) 281
Hpy188I TCNGA 2 cut(s) 34, 205
Hpy188III TCNNGA 2 cut(s) 10, 251
HpyAV CCTTC 2 cut(s) 146, 262
HpyCH4III ACNGT 4 cut(s) 114, 143, 188, 337
HpyCH4V TGCA 3 cut(s) 122, 212, 242
HpyF10VI GCNNNNNNNGC 3 cut(s) 116, 218, 239
HpyF3I CTNAG 1 cut(s) 234
Hsp92II CATG 1 cut(s) 278
LmnI GCTCC 1 cut(s) 196
LpnPI CCDG 2 cut(s) 168, 178
Lsp1109I GCAGC 2 cut(s) 106, 134
MaeIII GTNAC 1 cut(s) 188
MboII GAAGA 2 cut(s) 137, 193
MluCI AATT 2 cut(s) 22, 318
MlyI GAGTC 1 cut(s) 290
MnlI CCTC 5 cut(s) 17, 91, 123, 222, 229
MseI TTAA 1 cut(s) 20
MwoI GCNNNNNNNGC 3 cut(s) 116, 218, 239
NlaIII CATG 1 cut(s) 278
NlaIV GGNNCC 1 cut(s) 134
PkrI GCNGC 2 cut(s) 121, 124
PleI GAGTC 1 cut(s) 289
PpsI GAGTC 1 cut(s) 289
PpuMI RGGWCCY 1 cut(s) 132
Psp5II RGGWCCY 1 cut(s) 132
PspN4I GGNNCC 1 cut(s) 134
PspPI GGNCC 1 cut(s) 132
PspPPI RGGWCCY 1 cut(s) 132
PstI CTGCAG 1 cut(s) 124
SaqAI TTAA 1 cut(s) 20
SatI GCNGC 2 cut(s) 120, 123
Sau96I GGNCC 1 cut(s) 132
SchI GAGTC 1 cut(s) 290
SetI ASST 5 cut(s) 157, 171, 201, 240, 297
SfcI CTRYAG 1 cut(s) 120
SinI GGWCC 1 cut(s) 132
Sse9I AATT 2 cut(s) 22, 318
SsiI CCGC 2 cut(s) 47, 226
TaaI ACNGT 4 cut(s) 114, 143, 188, 337
TaqI TCGA 1 cut(s) 312
TasI AATT 2 cut(s) 22, 318
Tru1I TTAA 1 cut(s) 20
Tru9I TTAA 1 cut(s) 20
TscAI CASTG 1 cut(s) 119
TseI GCWGC 2 cut(s) 119, 122
TspRI CASTG 1 cut(s) 119
VpaK11BI GGWCC 1 cut(s) 132
XapI RAATTY 1 cut(s) 22
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.