pycom16g21600

Plasma membrane ATPase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
20192452 .. 20194845
2394 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g21600.8

Sequence Viewer

Length: 1326 bp
ATGATTACTGGCGATCAACTTGCCATTGCCAAGGAAACTGGCCGGAGACTTGGAATGGGAACAAACATGTACCCATCTGCTTCCTTACTTGGTCAAGACAAGGATGCTAGCATAGCTGCCCTTCCAATTGAAGAGTTAATTGAGAAGGCTGACGGGTTCGCTGGAGTGTTTCCAGAGCACAAATACGAAATTGTGAAGAAGTTGCAGGAAAAAAAGCACATTTGTGGAATGACGGGAGATGGTGTCAATGATGCCCCTGCATTGAAGAAGGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCTGCACGAAGTGCTTCTGACATTGTTCTTACAGAACCCGGACTGAGTGTCATCATTAGTGCAGTGTTGACCAGTAGAGCTATTTTCCAGAGAATGAAGAACTACACAATCTATGCGGTTTCGATCACCATTCGTATTGTGTTTGGTTTCATGTTCATTGCTCTCATATGGAAGTTCGACTTCTCACCTTTCATGGTTTTGATTATTGCCATATTGAACGATGGCACAATTATGACAATATCAAAGGATAGAGTAAAGCCATCTCCCCTGCCTGATAGCTGGAAATTGAAAGAGATTTTTGCTACCGGGATTGTGCTTGGCGGTTACTTGGCATTGATGACTGTTATCTTCTTCTGGTTAATCAAAGAAACTGACTTCTTCTCCGACCAATTTGGTGTAAGATCCTTAAGGGAGACTCCTGAGGAACTAATGGCTGCCTTGTACCTGCAAGTGAGTATTGTAAGCCAGGCCCTCATTTTTGTGACTCGATCCCGCGGCTTCTCCTTTATGGAACGCCCTGGAATGCTTCTACTCGGTGCTTTCATGATCGCGCAGCTGATTGCAACTTTGATAGCAGTATATGCCAACTGGAGTTTTGCAAGAATACACGGATGTGGTTGGGGATGGGCTGGTGTCATCTGGATTTACAGCATTGTCTTCTATTTCCCACTAGACTTGATGAAATTCGCCATCCGTTACATCTTGAGTGGAAAGGCGTGGCTCAACTTGCTAGAGAACAAGACTGCCTTTACCACCAAGAAAGATTATGGAAAAGAAGAGAGAGAAGCTCAATGGGCTCATGCTCAAAGGACCCTTCACGGTCTCGAAGCACCAGAATCTTCTAGTATCTTCAATGACAAGAGCAGCTACAGAGAGCTGTCTGAGATTGCTGAGCAGGCCAAGAGACGAGCTGAAGTTGCAAGACTTCGGGAGCTTCACACGCTCAAGGGACATGTGGAATCAGTTGTGAAGCTAAAAGGCCTGGACATTGACACAATCCAGCAGCATTATACAGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

442

Amino Acids

49.3

Weight (kDa)

8.28

Isoelectric Point (pI)

35.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 759
AccII CGCG 2 cut(s) 801, 857
AciI CCGC 4 cut(s) 422, 627, 799, 801
AclWI GGATC 2 cut(s) 702, 789
AcoI YGGCCR 1 cut(s) 40
AcsI RAATTY 1 cut(s) 989
AcuI CTGAAG 1 cut(s) 1239
AdeI CACNNNGTG 1 cut(s) 317
AfaI GTAC 2 cut(s) 71, 749
AflII CTTAAG 1 cut(s) 712
AflIII ACRYGT 2 cut(s) 66, 1258
AgsI TTSAA 5 cut(s) 131, 265, 523, 595, 1159
AhdI GACNNNNNGTC 1 cut(s) 353
AjnI CCWGG 3 cut(s) 771, 823, 1287
AleI CACNNNNGTG 2 cut(s) 222, 918
Alw21I GWGCWC 1 cut(s) 180
Alw26I GTCTC 4 cut(s) 40, 713, 1133, 1204
AlwI GGATC 2 cut(s) 702, 789
AlwNI CAGNNNCTG 1 cut(s) 308
AoxI GGCC 4 cut(s) 40, 774, 1203, 1285
ApeKI GCWGC 6 cut(s) 116, 308, 740, 859, 1170, 1309
ApoI RAATTY 1 cut(s) 989
Asp700I GAANNNNTTC 1 cut(s) 319
AspLEI GCGC 1 cut(s) 859
AspS9I GGNCC 2 cut(s) 775, 1116
AsuC2I CCSGG 2 cut(s) 345, 613
AsuHPI GGTGA 2 cut(s) 424, 483
AsuNHI GCTAGC 1 cut(s) 107
AvaII GGWCC 1 cut(s) 1116
AxyI CCTNAGG 1 cut(s) 726
BanII GRGCYC 1 cut(s) 1105
BbsI GAAGAC 1 cut(s) 955
Bbv12I GWGCWC 1 cut(s) 180
BbvI GCAGC 6 cut(s) 103, 295, 727, 871, 1182, 1321
BccI CCATC 6 cut(s) 82, 233, 521, 574, 924, 1004
BcgI CGANNNNNNTGC 1 cut(s) 36
BciT130I CCWGG 3 cut(s) 773, 825, 1289
BcnI CCSGG 2 cut(s) 345, 613
BcoDI GTCTC 4 cut(s) 40, 713, 1133, 1204
BfaI CTAG 4 cut(s) 108, 977, 1037, 1149
BfmI CTRYAG 2 cut(s) 300, 1174
BfrI CTTAAG 1 cut(s) 712
BfuAI ACCTGC 1 cut(s) 759
BisI GCNGC 7 cut(s) 117, 309, 741, 802, 860, 1171, 1310
BlpI GCTNAGC 1 cut(s) 1197
BlsI GCNGC 7 cut(s) 118, 310, 742, 803, 861, 1172, 1311
Bme1390I CCNGG 5 cut(s) 345, 613, 773, 825, 1289
Bme18I GGWCC 1 cut(s) 1116
BmeRI GACNNNNNGTC 1 cut(s) 353
BmgT120I GGNCC 2 cut(s) 775, 1116
BmiI GGNNCC 1 cut(s) 1118
BmrFI CCNGG 5 cut(s) 345, 613, 773, 825, 1289
BmsI GCATC 4 cut(s) 94, 241, 286, 295
BmtI GCTAGC 1 cut(s) 111
BpiI GAAGAC 1 cut(s) 955
BplI GAGNNNNNCTC 2 cut(s) 1078, 1110
BpmI CTGGAG 2 cut(s) 183, 916
Bpu1102I GCTNAGC 1 cut(s) 1197
BpuEI CTTGAG 2 cut(s) 1030, 1235
BpuMI CCSGG 2 cut(s) 345, 613
BsaI GGTCTC 1 cut(s) 1133
BsaJI CCNNGG 3 cut(s) 30, 799, 823
BsaXI ACNNNNNCTCC 4 cut(s) 228, 258, 671, 701
Bse1I ACTGG 4 cut(s) 13, 43, 378, 899
Bse21I CCTNAGG 1 cut(s) 726
Bse3DI GCAATG 2 cut(s) 24, 462
BseBI CCWGG 3 cut(s) 773, 825, 1289
BseDI CCNNGG 3 cut(s) 30, 799, 823
BseGI GGATG 4 cut(s) 109, 923, 935, 996
BseMI GCAATG 2 cut(s) 24, 462
BseMII CTCAG 4 cut(s) 341, 717, 1179, 1188
BseNI ACTGG 4 cut(s) 13, 43, 378, 899
BseXI GCAGC 6 cut(s) 103, 295, 727, 871, 1182, 1321
BsgI GTGCAG 2 cut(s) 294, 387
Bsh1236I CGCG 2 cut(s) 801, 857
BshFI GGCC 4 cut(s) 42, 776, 1205, 1287
BsiHKAI GWGCWC 1 cut(s) 180
BsiSI CCGG 3 cut(s) 43, 345, 612
BslFI GGGAC 1 cut(s) 1269
BsmAI GTCTC 4 cut(s) 40, 713, 1133, 1204
BsmBI CGTCTC 1 cut(s) 1204
BsmFI GGGAC 1 cut(s) 1269
BsmI GAATGC 1 cut(s) 834
BsnI GGCC 4 cut(s) 42, 776, 1205, 1287
Bso31I GGTCTC 1 cut(s) 1133
Bsp1286I GDGCHC 2 cut(s) 180, 1105
Bsp143I GATC 5 cut(s) 13, 429, 707, 794, 852
Bsp1720I GCTNAGC 1 cut(s) 1197
BspACI CCGC 4 cut(s) 422, 627, 799, 801
BspANI GGCC 4 cut(s) 42, 776, 1205, 1287
BspCNI CTCAG 4 cut(s) 342, 718, 1180, 1189
BspFNI CGCG 2 cut(s) 801, 857
BspHI TCATGA 1 cut(s) 849
BspLI GGNNCC 1 cut(s) 1118
BspMI ACCTGC 1 cut(s) 759
BspOI GCTAGC 1 cut(s) 111
BspPI GGATC 2 cut(s) 702, 789
BspTI CTTAAG 1 cut(s) 712
BspTNI GGTCTC 1 cut(s) 1133
BsrDI GCAATG 2 cut(s) 24, 462
BsrI ACTGG 4 cut(s) 13, 43, 378, 899
BssECI CCNNGG 3 cut(s) 30, 799, 823
BssMI GATC 5 cut(s) 13, 429, 707, 794, 852
BssT1I CCWWGG 1 cut(s) 30
Bst2UI CCWGG 3 cut(s) 773, 825, 1289
Bst4CI ACNGT 3 cut(s) 649, 1127, 1321
Bst6I CTCTTC 2 cut(s) 126, 1077
BstAFI CTTAAG 1 cut(s) 712
BstAPI GCANNNNNTGC 2 cut(s) 317, 887
BstC8I GCNNGC 2 cut(s) 109, 1203
BstDEI CTNAG 4 cut(s) 350, 726, 1188, 1197
BstDSI CCRYGG 1 cut(s) 799
BstF5I GGATG 4 cut(s) 109, 923, 935, 996
BstFNI CGCG 2 cut(s) 801, 857
BstHHI GCGC 1 cut(s) 859
BstKTI GATC 5 cut(s) 16, 432, 710, 797, 855
BstMAI GTCTC 4 cut(s) 40, 713, 1133, 1204
BstMBI GATC 5 cut(s) 13, 429, 707, 794, 852
BstMWI GCNNNNNNNGC 9 cut(s) 113, 305, 317, 887, 1033, 1100, 1202, 1223, 1246
BstNI CCWGG 3 cut(s) 773, 825, 1289
BstNSI RCATGY 2 cut(s) 70, 1262
BstSCI CCNGG 5 cut(s) 343, 611, 771, 823, 1287
BstSFI CTRYAG 2 cut(s) 300, 1174
BstUI CGCG 2 cut(s) 801, 857
BstV1I GCAGC 6 cut(s) 103, 295, 727, 871, 1182, 1321
BstV2I GAAGAC 1 cut(s) 955
BstX2I RGATCY 1 cut(s) 707
BstYI RGATCY 1 cut(s) 707
Bsu36I CCTNAGG 1 cut(s) 726
BsuRI GGCC 4 cut(s) 42, 776, 1205, 1287
BtgI CCRYGG 1 cut(s) 799
BtsCI GGATG 4 cut(s) 109, 923, 935, 996
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 2 cut(s) 375, 1326
BveI ACCTGC 1 cut(s) 759
Cac8I GCNNGC 2 cut(s) 109, 1203
CaiI CAGNNNCTG 1 cut(s) 308
CciI TCATGA 1 cut(s) 849
CfoI GCGC 1 cut(s) 859
Cfr13I GGNCC 2 cut(s) 775, 1116
Cfr42I CCGCGG 1 cut(s) 802
Csp6I GTAC 2 cut(s) 70, 748
CspCI CAANNNNNGTGG 2 cut(s) 963, 998
CviAII CATG 6 cut(s) 67, 457, 499, 850, 1106, 1259
CviQI GTAC 2 cut(s) 70, 748
DdeI CTNAG 4 cut(s) 350, 726, 1188, 1197
DpnI GATC 5 cut(s) 15, 431, 709, 796, 854
DpnII GATC 5 cut(s) 13, 429, 707, 794, 852
DraIII CACNNNGTG 1 cut(s) 317
DriI GACNNNNNGTC 1 cut(s) 353
EaeI YGGCCR 1 cut(s) 40
Eam1104I CTCTTC 2 cut(s) 126, 1077
Eam1105I GACNNNNNGTC 1 cut(s) 353
EarI CTCTTC 2 cut(s) 126, 1077
Eco130I CCWWGG 1 cut(s) 30
Eco147I AGGCCT 1 cut(s) 1287
Eco24I GRGCYC 1 cut(s) 1105
Eco31I GGTCTC 1 cut(s) 1133
Eco47I GGWCC 1 cut(s) 1116
Eco57I CTGAAG 1 cut(s) 1239
Eco81I CCTNAGG 1 cut(s) 726
EcoO109I RGGNCCY 2 cut(s) 775, 1116
EcoRII CCWGG 3 cut(s) 771, 823, 1287
EcoT14I CCWWGG 1 cut(s) 30
EcoT38I GRGCYC 1 cut(s) 1105
ErhI CCWWGG 1 cut(s) 30
Esp3I CGTCTC 1 cut(s) 1204
FaeI CATG 6 cut(s) 70, 460, 502, 853, 1109, 1262
FalI AAGNNNNNCTT 4 cut(s) 470, 502, 1037, 1069
FaqI GGGAC 1 cut(s) 1269
FatI CATG 6 cut(s) 66, 456, 498, 849, 1105, 1258
FauI CCCGC 1 cut(s) 806
FauNDI CATATG 1 cut(s) 473
Fnu4HI GCNGC 7 cut(s) 117, 309, 741, 802, 860, 1171, 1310
FokI GGATG 4 cut(s) 116, 930, 942, 983
FriOI GRGCYC 1 cut(s) 1105
Fsp4HI GCNGC 7 cut(s) 117, 309, 741, 802, 860, 1171, 1310
FspBI CTAG 4 cut(s) 108, 977, 1037, 1149
GlaI GCGC 1 cut(s) 858
GluI GCNGC 7 cut(s) 117, 309, 741, 802, 860, 1171, 1310
GsuI CTGGAG 2 cut(s) 183, 916
HaeIII GGCC 4 cut(s) 42, 776, 1205, 1287
HapII CCGG 3 cut(s) 43, 345, 612
HhaI GCGC 1 cut(s) 859
Hin1II CATG 6 cut(s) 70, 460, 502, 853, 1109, 1262
Hin6I GCGC 1 cut(s) 857
HinP1I GCGC 1 cut(s) 857
HincII GTYRAC 1 cut(s) 375
HindII GTYRAC 1 cut(s) 375
HinfI GANTC 4 cut(s) 721, 790, 1142, 1265
HpaII CCGG 3 cut(s) 43, 345, 612
HphI GGTGA 2 cut(s) 424, 483
Hpy166II GTNNAC 1 cut(s) 375
Hpy188I TCNGA 3 cut(s) 325, 691, 1189
Hpy188III TCNNGA 9 cut(s) 95, 173, 394, 725, 850, 946, 1009, 1130, 1235
Hpy8I GTNNAC 1 cut(s) 375
HpyAV CCTTC 4 cut(s) 131, 139, 262, 1130
HpyCH4III ACNGT 3 cut(s) 649, 1127, 1321
HpyCH4V TGCA 8 cut(s) 205, 260, 311, 368, 754, 869, 905, 1226
HpyF10VI GCNNNNNNNGC 9 cut(s) 113, 305, 317, 887, 1033, 1100, 1202, 1223, 1246
HpyF3I CTNAG 4 cut(s) 350, 726, 1188, 1197
Hsp92II CATG 6 cut(s) 70, 460, 502, 853, 1109, 1262
HspAI GCGC 1 cut(s) 857
KspI CCGCGG 1 cut(s) 802
Kzo9I GATC 5 cut(s) 13, 429, 707, 794, 852
LmnI GCTCC 1 cut(s) 1237
Lsp1109I GCAGC 6 cut(s) 103, 295, 727, 871, 1182, 1321
LweI GCATC 4 cut(s) 94, 241, 286, 295
MaeI CTAG 4 cut(s) 108, 977, 1037, 1149
MaeIII GTNAC 3 cut(s) 629, 787, 1001
MalI GATC 5 cut(s) 15, 431, 709, 796, 854
MboI GATC 5 cut(s) 13, 429, 707, 794, 852
MfeI CAATTG 1 cut(s) 126
MflI RGATCY 1 cut(s) 707
MhlI GDGCHC 2 cut(s) 180, 1105
MluCI AATT 8 cut(s) 126, 138, 189, 282, 534, 590, 695, 989
MlyI GAGTC 2 cut(s) 715, 784
MmeI TCCRAC 1 cut(s) 714
MnlI CCTC 2 cut(s) 721, 788
MroXI GAANNNNTTC 1 cut(s) 319
MseI TTAA 3 cut(s) 137, 665, 713
MslI CAYNNNNRTG 4 cut(s) 222, 536, 785, 918
MspA1I CMGCKG 2 cut(s) 801, 862
MspCI CTTAAG 1 cut(s) 712
MspI CCGG 3 cut(s) 43, 345, 612
MspR9I CCNGG 5 cut(s) 345, 613, 773, 825, 1289
MunI CAATTG 1 cut(s) 126
Mva1269I GAATGC 1 cut(s) 834
MvaI CCWGG 3 cut(s) 773, 825, 1289
MvnI CGCG 2 cut(s) 801, 857
MwoI GCNNNNNNNGC 9 cut(s) 113, 305, 317, 887, 1033, 1100, 1202, 1223, 1246
NciI CCSGG 2 cut(s) 345, 613
NdeI CATATG 1 cut(s) 473
NdeII GATC 5 cut(s) 13, 429, 707, 794, 852
NheI GCTAGC 1 cut(s) 107
NlaIII CATG 6 cut(s) 70, 460, 502, 853, 1109, 1262
NlaIV GGNNCC 1 cut(s) 1118
NmuCI GTSAC 1 cut(s) 787
NspI RCATGY 2 cut(s) 70, 1262
OliI CACNNNNGTG 2 cut(s) 222, 918
PagI TCATGA 1 cut(s) 849
PceI AGGCCT 1 cut(s) 1287
PciI ACATGT 2 cut(s) 66, 1258
PctI GAATGC 1 cut(s) 834
PdmI GAANNNNTTC 1 cut(s) 319
PfeI GAWTC 2 cut(s) 1142, 1265
PkrI GCNGC 7 cut(s) 118, 310, 742, 803, 861, 1172, 1311
PleI GAGTC 2 cut(s) 715, 784
PpsI GAGTC 2 cut(s) 715, 784
PpuMI RGGWCCY 1 cut(s) 1116
PscI ACATGT 2 cut(s) 66, 1258
Psp5II RGGWCCY 1 cut(s) 1116
Psp6I CCWGG 3 cut(s) 771, 823, 1287
PspGI CCWGG 3 cut(s) 771, 823, 1287
PspN4I GGNNCC 1 cut(s) 1118
PspPI GGNCC 2 cut(s) 775, 1116
PspPPI RGGWCCY 1 cut(s) 1116
PstNI CAGNNNCTG 1 cut(s) 308
PsuI RGATCY 1 cut(s) 707
PvuII CAGCTG 1 cut(s) 862
RsaI GTAC 2 cut(s) 71, 749
RsaNI GTAC 2 cut(s) 70, 748
RseI CAYNNNNRTG 4 cut(s) 222, 536, 785, 918
SacII CCGCGG 1 cut(s) 802
SaqAI TTAA 3 cut(s) 137, 665, 713
SatI GCNGC 7 cut(s) 117, 309, 741, 802, 860, 1171, 1310
Sau3AI GATC 5 cut(s) 13, 429, 707, 794, 852
Sau96I GGNCC 2 cut(s) 775, 1116
SchI GAGTC 2 cut(s) 715, 784
ScrFI CCNGG 5 cut(s) 345, 613, 773, 825, 1289
SduI GDGCHC 2 cut(s) 180, 1105
SfaNI GCATC 4 cut(s) 94, 241, 286, 295
SfcI CTRYAG 2 cut(s) 300, 1174
Sfr303I CCGCGG 1 cut(s) 802
SgrBI CCGCGG 1 cut(s) 802
SinI GGWCC 1 cut(s) 1116
SmiMI CAYNNNNRTG 4 cut(s) 222, 536, 785, 918
SmlI CTYRAG 3 cut(s) 712, 1009, 1250
SmoI CTYRAG 3 cut(s) 712, 1009, 1250
Sse9I AATT 8 cut(s) 126, 138, 189, 282, 534, 590, 695, 989
SseBI AGGCCT 1 cut(s) 1287
SsiI CCGC 4 cut(s) 422, 627, 799, 801
SspMI CTAG 4 cut(s) 108, 977, 1037, 1149
StuI AGGCCT 1 cut(s) 1287
StyD4I CCNGG 5 cut(s) 343, 611, 771, 823, 1287
StyI CCWWGG 1 cut(s) 30
TaaI ACNGT 3 cut(s) 649, 1127, 1321
TaqI TCGA 4 cut(s) 428, 483, 793, 1131
TasI AATT 8 cut(s) 126, 138, 189, 282, 534, 590, 695, 989
TauI GCSGC 1 cut(s) 804
TfiI GAWTC 2 cut(s) 1142, 1265
Tru1I TTAA 3 cut(s) 137, 665, 713
Tru9I TTAA 3 cut(s) 137, 665, 713
TscAI CASTG 2 cut(s) 375, 1326
TseFI GTSAC 1 cut(s) 787
TseI GCWGC 6 cut(s) 116, 308, 740, 859, 1170, 1309
Tsp45I GTSAC 1 cut(s) 787
TspDTI ATGAA 6 cut(s) 416, 445, 451, 487, 838, 1001
TspGWI ACGGA 2 cut(s) 930, 989
TspRI CASTG 2 cut(s) 375, 1326
Vha464I CTTAAG 1 cut(s) 712
VpaK11BI GGWCC 1 cut(s) 1116
XapI RAATTY 1 cut(s) 989
XceI RCATGY 2 cut(s) 70, 1262
XmnI GAANNNNTTC 1 cut(s) 319
XspI CTAG 4 cut(s) 108, 977, 1037, 1149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.