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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25660 AT2G25660 AT2G25660 AT2G25660 |
| fragaria_vesca | FvH4_2g30180 |
| malus_domestica | MD08G1135800.v1.1 MD15G1115200.v1.1 |
| prunus_persica | Prupe.1G466400_v2.0.a1 Prupe.1G466400_v2.0.a1 |
| pyrus_communis | pycom08g11480 pycom15g10380 |
| rosa_chinensis | RchiOBHm_Chr6g0312731 |
| rosa_laevigata | RLG00000010303 |
| rosa_multiflora | Rmu_ssc0000412.1_g000012 |
| rosa_roxburghii | Rroxscaffold_7G00156550 |
| rosa_rugosa | Rorug06G0398700 Rorug06G0398900 |
| rosa_samantha | Rh6AG516100 Rh6BG527400 Rh6CG532300 Rh6DG518400 |
| rosa_wichuraiana | Rw6G044840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 3 cut(s) | 53, 224, 3597 |
| AbsI | CCTCGAGG | 1 cut(s) | 4072 |
| Acc36I | ACCTGC | 2 cut(s) | 3807, 4114 |
| AccB1I | GGYRCC | 2 cut(s) | 1909, 3155 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 4506 |
| AccI | GTMKAC | 2 cut(s) | 267, 512 |
| AccII | CGCG | 1 cut(s) | 734 |
| AcoI | YGGCCR | 3 cut(s) | 433, 778, 4788 |
| AcuI | CTGAAG | 9 cut(s) | 513, 1104, 1456, 1482, 2345, 3207, 3563, 3587, 4826 |
| AcyI | GRCGYC | 4 cut(s) | 50, 221, 1910, 3594 |
| AdeI | CACNNNGTG | 1 cut(s) | 2171 |
| AfaI | GTAC | 7 cut(s) | 447, 1137, 1347, 2241, 2557, 2824, 4810 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 866, 959, 1971, 3074, 3165, 4430, 4506, 4924 |
| AflIII | ACRYGT | 2 cut(s) | 409, 3309 |
| AgeI | ACCGGT | 1 cut(s) | 3628 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1854 |
| AjiI | CACGTC | 1 cut(s) | 4354 |
| AjnI | CCWGG | 7 cut(s) | 1348, 2331, 2380, 2710, 2883, 3891, 4785 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3810, 3842 |
| Alw26I | GTCTC | 5 cut(s) | 1036, 1391, 1417, 2385, 2485 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 971, 1058, 2564 |
| Ama87I | CYCGRG | 4 cut(s) | 384, 2648, 4072, 4829 |
| ApaI | GGGCCC | 1 cut(s) | 236 |
| ApeKI | GCWGC | 6 cut(s) | 1121, 1535, 2288, 4109, 4574, 4627 |
| AscI | GGCGCGCC | 1 cut(s) | 732 |
| AsiGI | ACCGGT | 1 cut(s) | 3628 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 675, 2688 |
| AspLEI | GCGC | 5 cut(s) | 734, 736, 1912, 2883, 4956 |
| AsuC2I | CCSGG | 1 cut(s) | 4298 |
| AsuII | TTCGAA | 1 cut(s) | 4965 |
| AvaI | CYCGRG | 4 cut(s) | 384, 2648, 4072, 4829 |
| AvaII | GGWCC | 6 cut(s) | 203, 621, 992, 1467, 2329, 4226 |
| AxyI | CCTNAGG | 1 cut(s) | 861 |
| BaeGI | GKGCMC | 2 cut(s) | 236, 3892 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 1337, 1370, 2120, 2153, 4800, 4833 |
| BalI | TGGCCA | 3 cut(s) | 435, 780, 4790 |
| BamHI | GGATCC | 1 cut(s) | 4771 |
| BanI | GGYRCC | 2 cut(s) | 1909, 3155 |
| BanII | GRGCYC | 1 cut(s) | 236 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3963, 3995 |
| BauI | CACGAG | 1 cut(s) | 2388 |
| BbsI | GAAGAC | 2 cut(s) | 2703, 4832 |
| BbvCI | CCTCAGC | 1 cut(s) | 2511 |
| BbvI | GCAGC | 6 cut(s) | 1133, 1522, 2275, 4096, 4561, 4639 |
| BceAI | ACGGC | 2 cut(s) | 1993, 2334 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1702, 1736, 4053, 4087, 4955, 4989 |
| BciT130I | CCWGG | 7 cut(s) | 1350, 2333, 2382, 2712, 2885, 3893, 4787 |
| BciVI | GTATCC | 2 cut(s) | 2770, 3439 |
| BcnI | CCSGG | 1 cut(s) | 4298 |
| BcoDI | GTCTC | 5 cut(s) | 1036, 1391, 1417, 2385, 2485 |
| BfmI | CTRYAG | 3 cut(s) | 513, 3390, 4934 |
| BfoI | RGCGCY | 2 cut(s) | 1913, 4957 |
| BfuAI | ACCTGC | 2 cut(s) | 3807, 4114 |
| BfuI | GTATCC | 2 cut(s) | 2770, 3439 |
| BisI | GCNGC | 8 cut(s) | 502, 1122, 1536, 2289, 4110, 4575, 4628, 4918 |
| BlsI | GCNGC | 8 cut(s) | 503, 1123, 1537, 2290, 4111, 4576, 4629, 4919 |
| Bme1390I | CCNGG | 8 cut(s) | 1350, 2333, 2382, 2712, 2885, 3893, 4298, 4787 |
| Bme18I | GGWCC | 6 cut(s) | 203, 621, 992, 1467, 2329, 4226 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1854 |
| BmeT110I | CYCGRG | 4 cut(s) | 384, 2648, 4072, 4829 |
| BmgBI | CACGTC | 1 cut(s) | 4354 |
| BmiI | GGNNCC | 9 cut(s) | 205, 234, 235, 381, 1468, 1911, 3157, 3485, 4773 |
| BmrFI | CCNGG | 8 cut(s) | 1350, 2333, 2382, 2712, 2885, 3893, 4298, 4787 |
| BpiI | GAAGAC | 2 cut(s) | 2703, 4832 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2147, 2179 |
| BpmI | CTGGAG | 1 cut(s) | 2354 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2511 |
| Bpu14I | TTCGAA | 1 cut(s) | 4965 |
| BpuEI | CTTGAG | 3 cut(s) | 4304, 4373, 4942 |
| BpuMI | CCSGG | 1 cut(s) | 4298 |
| Bsa29I | ATCGAT | 2 cut(s) | 1339, 3171 |
| BsaAI | YACGTR | 1 cut(s) | 445 |
| BsaHI | GRCGYC | 4 cut(s) | 50, 221, 1910, 3594 |
| BsaI | GGTCTC | 3 cut(s) | 1036, 1417, 2385 |
| BsaWI | WCCGGW | 1 cut(s) | 3628 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 123, 153 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 866, 959, 1971, 3074, 3165, 4430, 4506, 4924 |
| Bse118I | RCCGGY | 2 cut(s) | 1109, 3628 |
| Bse21I | CCTNAGG | 1 cut(s) | 861 |
| Bse3DI | GCAATG | 7 cut(s) | 1836, 2445, 2776, 2872, 3592, 4890, 4895 |
| BseBI | CCWGG | 7 cut(s) | 1350, 2333, 2382, 2712, 2885, 3893, 4787 |
| BseCI | ATCGAT | 2 cut(s) | 1339, 3171 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 866, 959, 1971, 3074, 3165, 4430, 4506, 4924 |
| BseMI | GCAATG | 7 cut(s) | 1836, 2445, 2776, 2872, 3592, 4890, 4895 |
| BsePI | GCGCGC | 1 cut(s) | 732 |
| BseRI | GAGGAG | 2 cut(s) | 1500, 4341 |
| BseSI | GKGCMC | 2 cut(s) | 236, 3892 |
| BseXI | GCAGC | 6 cut(s) | 1133, 1522, 2275, 4096, 4561, 4639 |
| BseYI | CCCAGC | 2 cut(s) | 2444, 3363 |
| BsgI | GTGCAG | 1 cut(s) | 1134 |
| Bsh1236I | CGCG | 1 cut(s) | 734 |
| Bsh1285I | CGRYCG | 4 cut(s) | 1132, 2249, 4060, 4569 |
| BshNI | GGYRCC | 2 cut(s) | 1909, 3155 |
| BshTI | ACCGGT | 1 cut(s) | 3628 |
| BshVI | ATCGAT | 2 cut(s) | 1339, 3171 |
| BsiEI | CGRYCG | 4 cut(s) | 1132, 2249, 4060, 4569 |
| BsiHKCI | CYCGRG | 4 cut(s) | 384, 2648, 4072, 4829 |
| BsiSI | CCGG | 3 cut(s) | 1110, 3629, 4298 |
| BslFI | GGGAC | 3 cut(s) | 61, 2676, 2947 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 866, 959, 1971, 3074, 3165, 4430, 4506, 4924 |
| BsmAI | GTCTC | 5 cut(s) | 1036, 1391, 1417, 2385, 2485 |
| BsmFI | GGGAC | 3 cut(s) | 61, 2676, 2947 |
| BsmI | GAATGC | 4 cut(s) | 852, 1124, 1255, 4634 |
| Bso31I | GGTCTC | 3 cut(s) | 1036, 1417, 2385 |
| BsoBI | CYCGRG | 4 cut(s) | 384, 2648, 4072, 4829 |
| Bsp119I | TTCGAA | 1 cut(s) | 4965 |
| Bsp120I | GGGCCC | 1 cut(s) | 232 |
| Bsp1286I | GDGCHC | 2 cut(s) | 236, 3892 |
| Bsp19I | CCATGG | 2 cut(s) | 2781, 3964 |
| BspDI | ATCGAT | 2 cut(s) | 1339, 3171 |
| BspFNI | CGCG | 1 cut(s) | 734 |
| BspHI | TCATGA | 1 cut(s) | 3786 |
| BspLI | GGNNCC | 9 cut(s) | 205, 234, 235, 381, 1468, 1911, 3157, 3485, 4773 |
| BspMAI | CTGCAG | 1 cut(s) | 4938 |
| BspMI | ACCTGC | 2 cut(s) | 3807, 4114 |
| BspQI | GCTCTTC | 1 cut(s) | 625 |
| BspT104I | TTCGAA | 1 cut(s) | 4965 |
| BspT107I | GGYRCC | 2 cut(s) | 1909, 3155 |
| BspTNI | GGTCTC | 3 cut(s) | 1036, 1417, 2385 |
| BsrDI | GCAATG | 7 cut(s) | 1836, 2445, 2776, 2872, 3592, 4890, 4895 |
| BsrFI | RCCGGY | 2 cut(s) | 1109, 3628 |
| BssAI | RCCGGY | 2 cut(s) | 1109, 3628 |
| BssHII | GCGCGC | 1 cut(s) | 732 |
| BssNI | GRCGYC | 4 cut(s) | 50, 221, 1910, 3594 |
| BssSI | CACGAG | 1 cut(s) | 2388 |
| BssT1I | CCWWGG | 4 cut(s) | 828, 2781, 3826, 3964 |
| Bst2BI | CACGAG | 1 cut(s) | 2388 |
| Bst2UI | CCWGG | 7 cut(s) | 1350, 2333, 2382, 2712, 2885, 3893, 4787 |
| Bst6I | CTCTTC | 2 cut(s) | 625, 2212 |
| BstACI | GRCGYC | 4 cut(s) | 50, 221, 1910, 3594 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1250, 2855 |
| BstBAI | YACGTR | 1 cut(s) | 445 |
| BstBI | TTCGAA | 1 cut(s) | 4965 |
| BstDSI | CCRYGG | 3 cut(s) | 775, 2781, 3964 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 864 |
| BstFNI | CGCG | 1 cut(s) | 734 |
| BstH2I | RGCGCY | 2 cut(s) | 1913, 4957 |
| BstHHI | GCGC | 5 cut(s) | 734, 736, 1912, 2883, 4956 |
| BstMAI | GTCTC | 5 cut(s) | 1036, 1391, 1417, 2385, 2485 |
| BstMCI | CGRYCG | 4 cut(s) | 1132, 2249, 4060, 4569 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 1085, 1121, 1250, 1457, 2014, 2516, 2855, 3142 |
| BstNI | CCWGG | 7 cut(s) | 1350, 2333, 2382, 2712, 2885, 3893, 4787 |
| BstNSI | RCATGY | 5 cut(s) | 413, 554, 661, 3266, 3313 |
| BstSCI | CCNGG | 8 cut(s) | 1348, 2331, 2380, 2710, 2883, 3891, 4296, 4785 |
| BstSFI | CTRYAG | 3 cut(s) | 513, 3390, 4934 |
| BstSLI | GKGCMC | 2 cut(s) | 236, 3892 |
| BstUI | CGCG | 1 cut(s) | 734 |
| BstV1I | GCAGC | 6 cut(s) | 1133, 1522, 2275, 4096, 4561, 4639 |
| BstV2I | GAAGAC | 2 cut(s) | 2703, 4832 |
| BstX2I | RGATCY | 6 cut(s) | 597, 2560, 2587, 4438, 4737, 4771 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 618, 3684 |
| BstYI | RGATCY | 6 cut(s) | 597, 2560, 2587, 4438, 4737, 4771 |
| Bsu15I | ATCGAT | 2 cut(s) | 1339, 3171 |
| Bsu36I | CCTNAGG | 1 cut(s) | 861 |
| BsuI | GTATCC | 2 cut(s) | 2770, 3439 |
| BsuTUI | ATCGAT | 2 cut(s) | 1339, 3171 |
| BtgI | CCRYGG | 3 cut(s) | 775, 2781, 3964 |
| BtgZI | GCGATG | 1 cut(s) | 1491 |
| BtrI | CACGTC | 1 cut(s) | 4354 |
| BveI | ACCTGC | 2 cut(s) | 3807, 4114 |
| CaiI | CAGNNNCTG | 3 cut(s) | 971, 1058, 2564 |
| CciI | TCATGA | 1 cut(s) | 3786 |
| CfoI | GCGC | 5 cut(s) | 734, 736, 1912, 2883, 4956 |
| Cfr10I | RCCGGY | 2 cut(s) | 1109, 3628 |
| ClaI | ATCGAT | 2 cut(s) | 1339, 3171 |
| Csp6I | GTAC | 7 cut(s) | 446, 1136, 1346, 2240, 2556, 2823, 4809 |
| CspAI | ACCGGT | 1 cut(s) | 3628 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 787, 822 |
| CviQI | GTAC | 7 cut(s) | 446, 1136, 1346, 2240, 2556, 2823, 4809 |
| DinI | GGCGCC | 1 cut(s) | 1911 |
| DraI | TTTAAA | 4 cut(s) | 1389, 1728, 3477, 4212 |
| DraIII | CACNNNGTG | 1 cut(s) | 2171 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1854 |
| EaeI | YGGCCR | 3 cut(s) | 433, 778, 4788 |
| Eam1104I | CTCTTC | 2 cut(s) | 625, 2212 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1854 |
| EarI | CTCTTC | 2 cut(s) | 625, 2212 |
| EciI | GGCGGA | 1 cut(s) | 4616 |
| Eco130I | CCWWGG | 4 cut(s) | 828, 2781, 3826, 3964 |
| Eco147I | AGGCCT | 1 cut(s) | 4847 |
| Eco24I | GRGCYC | 1 cut(s) | 236 |
| Eco31I | GGTCTC | 3 cut(s) | 1036, 1417, 2385 |
| Eco32I | GATATC | 3 cut(s) | 162, 1044, 1492 |
| Eco47I | GGWCC | 6 cut(s) | 203, 621, 992, 1467, 2329, 4226 |
| Eco57I | CTGAAG | 9 cut(s) | 513, 1104, 1456, 1482, 2345, 3207, 3563, 3587, 4826 |
| Eco81I | CCTNAGG | 1 cut(s) | 861 |
| Eco88I | CYCGRG | 4 cut(s) | 384, 2648, 4072, 4829 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 864 |
| EcoO109I | RGGNCCY | 3 cut(s) | 233, 1467, 2945 |
| EcoRII | CCWGG | 7 cut(s) | 1348, 2331, 2380, 2710, 2883, 3891, 4785 |
| EcoRV | GATATC | 3 cut(s) | 162, 1044, 1492 |
| EcoT14I | CCWWGG | 4 cut(s) | 828, 2781, 3826, 3964 |
| EcoT22I | ATGCAT | 3 cut(s) | 1255, 1725, 3649 |
| EcoT38I | GRGCYC | 1 cut(s) | 236 |
| EgeI | GGCGCC | 1 cut(s) | 1911 |
| EheI | GGCGCC | 1 cut(s) | 1911 |
| ErhI | CCWWGG | 4 cut(s) | 828, 2781, 3826, 3964 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 2408, 2440, 2576, 2608, 3129, 3161, 3810, 3842 |
| FaqI | GGGAC | 3 cut(s) | 61, 2676, 2947 |
| FauI | CCCGC | 1 cut(s) | 3861 |
| FauNDI | CATATG | 1 cut(s) | 367 |
| FblI | GTMKAC | 2 cut(s) | 267, 512 |
| Fnu4HI | GCNGC | 8 cut(s) | 502, 1122, 1536, 2289, 4110, 4575, 4628, 4918 |
| FriOI | GRGCYC | 1 cut(s) | 236 |
| Fsp4HI | GCNGC | 8 cut(s) | 502, 1122, 1536, 2289, 4110, 4575, 4628, 4918 |
| GlaI | GCGC | 5 cut(s) | 733, 735, 1911, 2882, 4955 |
| GluI | GCNGC | 8 cut(s) | 502, 1122, 1536, 2289, 4110, 4575, 4628, 4918 |
| GsaI | CCCAGC | 2 cut(s) | 2448, 3367 |
| GsuI | CTGGAG | 1 cut(s) | 2354 |
| HaeII | RGCGCY | 2 cut(s) | 1913, 4957 |
| HapII | CCGG | 3 cut(s) | 1110, 3629, 4298 |
| HhaI | GCGC | 5 cut(s) | 734, 736, 1912, 2883, 4956 |
| Hin1I | GRCGYC | 4 cut(s) | 50, 221, 1910, 3594 |
| Hin6I | GCGC | 5 cut(s) | 732, 734, 1910, 2881, 4954 |
| HinP1I | GCGC | 5 cut(s) | 732, 734, 1910, 2881, 4954 |
| HincII | GTYRAC | 5 cut(s) | 268, 529, 3549, 3898, 4595 |
| HindII | GTYRAC | 5 cut(s) | 268, 529, 3549, 3898, 4595 |
| HindIII | AAGCTT | 5 cut(s) | 763, 834, 3972, 4214, 4643 |
| HpaI | GTTAAC | 1 cut(s) | 3549 |
| HpaII | CCGG | 3 cut(s) | 1110, 3629, 4298 |
| Hpy99I | CGWCG | 3 cut(s) | 272, 3004, 4951 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 1085, 1121, 1250, 1457, 2014, 2516, 2855, 3142 |
| Hsp92I | GRCGYC | 4 cut(s) | 50, 221, 1910, 3594 |
| HspAI | GCGC | 5 cut(s) | 732, 734, 1910, 2881, 4954 |
| KasI | GGCGCC | 1 cut(s) | 1909 |
| KspAI | GTTAAC | 1 cut(s) | 3549 |
| LguI | GCTCTTC | 1 cut(s) | 625 |
| LmnI | GCTCC | 6 cut(s) | 379, 1456, 1824, 2335, 4165, 4948 |
| Lsp1109I | GCAGC | 6 cut(s) | 1133, 1522, 2275, 4096, 4561, 4639 |
| MfeI | CAATTG | 1 cut(s) | 4504 |
| MflI | RGATCY | 6 cut(s) | 597, 2560, 2587, 4438, 4737, 4771 |
| MhlI | GDGCHC | 2 cut(s) | 236, 3892 |
| MlsI | TGGCCA | 3 cut(s) | 435, 780, 4790 |
| MluNI | TGGCCA | 3 cut(s) | 435, 780, 4790 |
| Mly113I | GGCGCC | 1 cut(s) | 1910 |
| MlyI | GAGTC | 6 cut(s) | 141, 4040, 4338, 4590, 4613, 4865 |
| MmeI | TCCRAC | 7 cut(s) | 1843, 1938, 2133, 2409, 3023, 3732, 4849 |
| Mox20I | TGGCCA | 3 cut(s) | 435, 780, 4790 |
| Mph1103I | ATGCAT | 3 cut(s) | 1255, 1725, 3649 |
| MroXI | GAANNNNTTC | 2 cut(s) | 675, 2688 |
| MscI | TGGCCA | 3 cut(s) | 435, 780, 4790 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1144, 1341, 2928, 3905 |
| Msp20I | TGGCCA | 3 cut(s) | 435, 780, 4790 |
| MspA1I | CMGCKG | 2 cut(s) | 955, 4151 |
| MspI | CCGG | 3 cut(s) | 1110, 3629, 4298 |
| MspR9I | CCNGG | 8 cut(s) | 1350, 2333, 2382, 2712, 2885, 3893, 4298, 4787 |
| MssI | GTTTAAAC | 1 cut(s) | 3477 |
| MunI | CAATTG | 1 cut(s) | 4504 |
| Mva1269I | GAATGC | 4 cut(s) | 852, 1124, 1255, 4634 |
| MvaI | CCWGG | 7 cut(s) | 1350, 2333, 2382, 2712, 2885, 3893, 4787 |
| MvnI | CGCG | 1 cut(s) | 734 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 1085, 1121, 1250, 1457, 2014, 2516, 2855, 3142 |
| NarI | GGCGCC | 1 cut(s) | 1910 |
| NciI | CCSGG | 1 cut(s) | 4298 |
| NcoI | CCATGG | 2 cut(s) | 2781, 3964 |
| NdeI | CATATG | 1 cut(s) | 367 |
| NlaIV | GGNNCC | 9 cut(s) | 205, 234, 235, 381, 1468, 1911, 3157, 3485, 4773 |
| NmuCI | GTSAC | 7 cut(s) | 371, 703, 967, 1938, 4349, 4375, 4525 |
| NsiI | ATGCAT | 3 cut(s) | 1255, 1725, 3649 |
| NspI | RCATGY | 5 cut(s) | 413, 554, 661, 3266, 3313 |
| NspV | TTCGAA | 1 cut(s) | 4965 |
| PaeI | GCATGC | 1 cut(s) | 554 |
| PaeR7I | CTCGAG | 3 cut(s) | 384, 2648, 4072 |
| PagI | TCATGA | 1 cut(s) | 3786 |
| PalAI | GGCGCGCC | 1 cut(s) | 732 |
| PauI | GCGCGC | 1 cut(s) | 732 |
| PceI | AGGCCT | 1 cut(s) | 4847 |
| PciI | ACATGT | 2 cut(s) | 409, 3309 |
| PciSI | GCTCTTC | 1 cut(s) | 625 |
| PctI | GAATGC | 4 cut(s) | 852, 1124, 1255, 4634 |
| PdmI | GAANNNNTTC | 2 cut(s) | 675, 2688 |
| PflFI | GACNNNGTC | 1 cut(s) | 272 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 4506 |
| PfoI | TCCNGGA | 1 cut(s) | 2331 |
| PinAI | ACCGGT | 1 cut(s) | 3628 |
| PkrI | GCNGC | 8 cut(s) | 503, 1123, 1537, 2290, 4111, 4576, 4629, 4919 |
| Ple19I | CGATCG | 2 cut(s) | 1132, 4060 |
| PleI | GAGTC | 6 cut(s) | 140, 4039, 4337, 4589, 4612, 4865 |
| PluTI | GGCGCC | 1 cut(s) | 1913 |
| PmeI | GTTTAAAC | 1 cut(s) | 3477 |
| PpsI | GAGTC | 6 cut(s) | 140, 4039, 4337, 4589, 4612, 4865 |
| Ppu21I | YACGTR | 1 cut(s) | 445 |
| PpuMI | RGGWCCY | 1 cut(s) | 1467 |
| PscI | ACATGT | 2 cut(s) | 409, 3309 |
| Psp5II | RGGWCCY | 1 cut(s) | 1467 |
| Psp6I | CCWGG | 7 cut(s) | 1348, 2331, 2380, 2710, 2883, 3891, 4785 |
| PspFI | CCCAGC | 2 cut(s) | 2444, 3363 |
| PspGI | CCWGG | 7 cut(s) | 1348, 2331, 2380, 2710, 2883, 3891, 4785 |
| PspN4I | GGNNCC | 9 cut(s) | 205, 234, 235, 381, 1468, 1911, 3157, 3485, 4773 |
| PspOMI | GGGCCC | 1 cut(s) | 232 |
| PspPPI | RGGWCCY | 1 cut(s) | 1467 |
| PspXI | VCTCGAGB | 2 cut(s) | 2648, 4072 |
| PstI | CTGCAG | 1 cut(s) | 4938 |
| PstNI | CAGNNNCTG | 3 cut(s) | 971, 1058, 2564 |
| PsuI | RGATCY | 6 cut(s) | 597, 2560, 2587, 4438, 4737, 4771 |
| PsyI | GACNNNGTC | 1 cut(s) | 272 |
| PteI | GCGCGC | 1 cut(s) | 732 |
| PvuI | CGATCG | 2 cut(s) | 1132, 4060 |
| PvuII | CAGCTG | 1 cut(s) | 4151 |
| RsaI | GTAC | 7 cut(s) | 447, 1137, 1347, 2241, 2557, 2824, 4810 |
| RsaNI | GTAC | 7 cut(s) | 446, 1136, 1346, 2240, 2556, 2823, 4809 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1144, 1341, 2928, 3905 |
| SalI | GTCGAC | 1 cut(s) | 266 |
| SapI | GCTCTTC | 1 cut(s) | 625 |
| SatI | GCNGC | 8 cut(s) | 502, 1122, 1536, 2289, 4110, 4575, 4628, 4918 |
| SchI | GAGTC | 6 cut(s) | 141, 4040, 4338, 4590, 4613, 4865 |
| ScrFI | CCNGG | 8 cut(s) | 1350, 2333, 2382, 2712, 2885, 3893, 4298, 4787 |
| SduI | GDGCHC | 2 cut(s) | 236, 3892 |
| SfcI | CTRYAG | 3 cut(s) | 513, 3390, 4934 |
| SfoI | GGCGCC | 1 cut(s) | 1911 |
| Sfr274I | CTCGAG | 3 cut(s) | 384, 2648, 4072 |
| SfuI | TTCGAA | 1 cut(s) | 4965 |
| SgsI | GGCGCGCC | 1 cut(s) | 732 |
| SinI | GGWCC | 6 cut(s) | 203, 621, 992, 1467, 2329, 4226 |
| SlaI | CTCGAG | 3 cut(s) | 384, 2648, 4072 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1144, 1341, 2928, 3905 |
| SmlI | CTYRAG | 6 cut(s) | 384, 2648, 4072, 4283, 4388, 4921 |
| SmoI | CTYRAG | 6 cut(s) | 384, 2648, 4072, 4283, 4388, 4921 |
| SphI | GCATGC | 1 cut(s) | 554 |
| SseBI | AGGCCT | 1 cut(s) | 4847 |
| SspDI | GGCGCC | 1 cut(s) | 1909 |
| SspI | AATATT | 5 cut(s) | 3880, 3952, 4408, 4798, 4970 |
| StuI | AGGCCT | 1 cut(s) | 4847 |
| StyD4I | CCNGG | 8 cut(s) | 1348, 2331, 2380, 2710, 2883, 3891, 4296, 4785 |
| StyI | CCWWGG | 4 cut(s) | 828, 2781, 3826, 3964 |
| TaqII | GACCGA | 3 cut(s) | 1441, 2263, 4583 |
| TatI | WGTACW | 2 cut(s) | 2239, 2555 |
| TauI | GCSGC | 2 cut(s) | 504, 4920 |
| TseFI | GTSAC | 7 cut(s) | 371, 703, 967, 1938, 4349, 4375, 4525 |
| TseI | GCWGC | 6 cut(s) | 1121, 1535, 2288, 4109, 4574, 4627 |
| Tsp45I | GTSAC | 7 cut(s) | 371, 703, 967, 1938, 4349, 4375, 4525 |
| TspGWI | ACGGA | 5 cut(s) | 54, 764, 799, 1059, 4935 |
| Tth111I | GACNNNGTC | 1 cut(s) | 272 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 4506 |
| VpaK11BI | GGWCC | 6 cut(s) | 203, 621, 992, 1467, 2329, 4226 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 864 |
| XbaI | TCTAGA | 3 cut(s) | 1034, 1804, 2692 |
| XceI | RCATGY | 5 cut(s) | 413, 554, 661, 3266, 3313 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 4540, 4657 |
| XhoI | CTCGAG | 3 cut(s) | 384, 2648, 4072 |
| XmiI | GTMKAC | 2 cut(s) | 267, 512 |
| XmnI | GAANNNNTTC | 2 cut(s) | 675, 2688 |
| ZraI | GACGTC | 3 cut(s) | 51, 222, 3595 |
| Zsp2I | ATGCAT | 3 cut(s) | 1255, 1725, 3649 |