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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25660 AT2G25660 AT2G25660 AT2G25660 |
| fragaria_vesca | FvH4_2g30180 |
| malus_domestica | MD08G1135800.v1.1 MD15G1115200.v1.1 |
| prunus_persica | Prupe.1G466400_v2.0.a1 Prupe.1G466400_v2.0.a1 |
| pyrus_communis | pycom08g11480 pycom15g10380 |
| rosa_chinensis | RchiOBHm_Chr6g0312731 |
| rosa_laevigata | RLG00000010303 |
| rosa_multiflora | Rmu_ssc0000412.1_g000012 |
| rosa_roxburghii | Rroxscaffold_7G00156550 |
| rosa_rugosa | Rorug06G0398700 Rorug06G0398900 |
| rosa_samantha | Rh6AG516100 Rh6BG527400 Rh6CG532300 Rh6DG518400 |
| rosa_wichuraiana | Rw6G044840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 111, 1586 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 980 |
| Acc16I | TGCGCA | 1 cut(s) | 654 |
| Acc36I | ACCTGC | 3 cut(s) | 111, 1304, 1586 |
| AccB1I | GGYRCC | 1 cut(s) | 4688 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1198 |
| AccI | GTMKAC | 2 cut(s) | 1803, 2048 |
| AccII | CGCG | 3 cut(s) | 456, 1974, 4374 |
| AccIII | TCCGGA | 2 cut(s) | 1235, 2843 |
| AclWI | GGATC | 5 cut(s) | 1436, 2943, 2956, 3469, 4091 |
| AcoI | YGGCCR | 2 cut(s) | 2314, 3782 |
| AcuI | CTGAAG | 9 cut(s) | 1848, 2049, 2992, 3018, 3569, 3728, 3881, 5102, 5126 |
| AcvI | CACGTG | 1 cut(s) | 3479 |
| AdeI | CACNNNGTG | 1 cut(s) | 3578 |
| AfaI | GTAC | 8 cut(s) | 435, 745, 1869, 2673, 3777, 3801, 4093, 4800 |
| AflIII | ACRYGT | 2 cut(s) | 1945, 4842 |
| AgeI | ACCGGT | 1 cut(s) | 5215 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 2023, 3390 |
| AjnI | CCWGG | 8 cut(s) | 1191, 1661, 2884, 3916, 4243, 4416, 4680, 4889 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 450, 482, 2687, 2719, 3851, 3883, 5349, 5381 |
| AleI | CACNNNNGTG | 1 cut(s) | 3481 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4767, 4799 |
| Alw21I | GWGCWC | 2 cut(s) | 329, 4260 |
| Alw26I | GTCTC | 8 cut(s) | 1499, 1745, 2953, 3137, 3398, 3425, 4021, 4175 |
| AlwI | GGATC | 5 cut(s) | 1436, 2943, 2956, 3469, 4091 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2507, 2594 |
| Ama87I | CYCGRG | 4 cut(s) | 29, 1920, 2396, 3018 |
| Aor13HI | TCCGGA | 2 cut(s) | 1235, 2843 |
| AoxI | GGCC | 9 cut(s) | 523, 1664, 2314, 3444, 3509, 3542, 3610, 3782, 4478 |
| ApeKI | GCWGC | 7 cut(s) | 776, 809, 821, 1822, 2657, 3766, 3824 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3868, 3900 |
| AseI | ATTAAT | 1 cut(s) | 2150 |
| AsiGI | ACCGGT | 1 cut(s) | 5215 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1360, 2211, 2462, 4224 |
| AspLEI | GCGC | 6 cut(s) | 456, 655, 1770, 3040, 4374, 4416 |
| AsuC2I | CCSGG | 2 cut(s) | 754, 1038 |
| AsuII | TTCGAA | 1 cut(s) | 478 |
| AsuNHI | GCTAGC | 2 cut(s) | 760, 3653 |
| AvaI | CYCGRG | 4 cut(s) | 29, 1920, 2396, 3018 |
| AvaII | GGWCC | 9 cut(s) | 556, 1059, 1076, 1455, 2157, 2528, 3003, 4123, 4894 |
| BaeGI | GKGCMC | 1 cut(s) | 1180 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3656, 3689 |
| BalI | TGGCCA | 1 cut(s) | 2316 |
| BamHI | GGATCC | 1 cut(s) | 2948 |
| BanI | GGYRCC | 1 cut(s) | 4688 |
| BanII | GRGCYC | 1 cut(s) | 4260 |
| BbrPI | CACGTG | 1 cut(s) | 3479 |
| Bbv12I | GWGCWC | 2 cut(s) | 329, 4260 |
| BbvCI | CCTCAGC | 1 cut(s) | 4047 |
| BbvI | GCAGC | 7 cut(s) | 788, 808, 821, 1834, 2669, 3753, 3811 |
| BceAI | ACGGC | 4 cut(s) | 326, 3000, 4601, 4676 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3238, 3272 |
| BciT130I | CCWGG | 8 cut(s) | 1193, 1663, 2886, 3918, 4245, 4418, 4682, 4891 |
| BciVI | GTATCC | 2 cut(s) | 675, 4978 |
| BclI | TGATCA | 2 cut(s) | 736, 1648 |
| BcnI | CCSGG | 2 cut(s) | 754, 1038 |
| BcoDI | GTCTC | 8 cut(s) | 1499, 1745, 2953, 3137, 3398, 3425, 4021, 4175 |
| BfmI | CTRYAG | 3 cut(s) | 704, 2049, 2508 |
| BfuAI | ACCTGC | 3 cut(s) | 111, 1304, 1586 |
| BfuI | GTATCC | 2 cut(s) | 675, 4978 |
| BglII | AGATCT | 1 cut(s) | 4425 |
| BisI | GCNGC | 8 cut(s) | 777, 810, 822, 1823, 2613, 2658, 3767, 3825 |
| BlsI | GCNGC | 8 cut(s) | 778, 811, 823, 1824, 2614, 2659, 3768, 3826 |
| BmcAI | AGTACT | 1 cut(s) | 435 |
| Bme18I | GGWCC | 9 cut(s) | 556, 1059, 1076, 1455, 2157, 2528, 3003, 4123, 4894 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 2023, 3390 |
| BmeT110I | CYCGRG | 4 cut(s) | 29, 1920, 2396, 3018 |
| BmrI | ACTGGG | 3 cut(s) | 2578, 4354, 4800 |
| BmtI | GCTAGC | 2 cut(s) | 764, 3657 |
| BmuI | ACTGGG | 3 cut(s) | 2578, 4354, 4800 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1872, 1904 |
| BpmI | CTGGAG | 3 cut(s) | 976, 1731, 2397 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4047 |
| Bpu14I | TTCGAA | 1 cut(s) | 478 |
| BpuEI | CTTGAG | 3 cut(s) | 141, 4096, 4205 |
| BpuMI | CCSGG | 2 cut(s) | 754, 1038 |
| Bsa29I | ATCGAT | 1 cut(s) | 2875 |
| BsaAI | YACGTR | 2 cut(s) | 3194, 3479 |
| BsaBI | GATNNNNATC | 1 cut(s) | 5185 |
| BsaI | GGTCTC | 3 cut(s) | 1745, 2953, 3425 |
| BsaWI | WCCGGW | 4 cut(s) | 1235, 1347, 2843, 5215 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 293, 323 |
| Bse118I | RCCGGY | 1 cut(s) | 5215 |
| Bse3DI | GCAATG | 6 cut(s) | 16, 168, 1604, 4309, 4405, 5131 |
| Bse8I | GATNNNNATC | 1 cut(s) | 5185 |
| BseAI | TCCGGA | 2 cut(s) | 1235, 2843 |
| BseBI | CCWGG | 8 cut(s) | 1193, 1663, 2886, 3918, 4245, 4418, 4682, 4891 |
| BseCI | ATCGAT | 1 cut(s) | 2875 |
| BseJI | GATNNNNATC | 1 cut(s) | 5185 |
| BseMI | GCAATG | 6 cut(s) | 16, 168, 1604, 4309, 4405, 5131 |
| BseRI | GAGGAG | 5 cut(s) | 282, 317, 613, 2217, 3036 |
| BseSI | GKGCMC | 1 cut(s) | 1180 |
| BseXI | GCAGC | 7 cut(s) | 788, 808, 821, 1834, 2669, 3753, 3811 |
| BseYI | CCCAGC | 4 cut(s) | 786, 2780, 3980, 4980 |
| BsgI | GTGCAG | 3 cut(s) | 1188, 1841, 4601 |
| Bsh1236I | CGCG | 3 cut(s) | 456, 1974, 4374 |
| BshFI | GGCC | 9 cut(s) | 525, 1666, 2316, 3446, 3511, 3544, 3612, 3784, 4480 |
| BshNI | GGYRCC | 1 cut(s) | 4688 |
| BshTI | ACCGGT | 1 cut(s) | 5215 |
| BshVI | ATCGAT | 1 cut(s) | 2875 |
| BsiHKAI | GWGCWC | 2 cut(s) | 329, 4260 |
| BsiHKCI | CYCGRG | 4 cut(s) | 29, 1920, 2396, 3018 |
| BsiSI | CCGG | 6 cut(s) | 754, 1037, 1236, 1348, 2844, 5216 |
| BslFI | GGGAC | 8 cut(s) | 101, 542, 1089, 2566, 4212, 4322, 4480, 4907 |
| BsmAI | GTCTC | 8 cut(s) | 1499, 1745, 2953, 3137, 3398, 3425, 4021, 4175 |
| BsmFI | GGGAC | 8 cut(s) | 101, 542, 1089, 2566, 4212, 4322, 4480, 4907 |
| BsmI | GAATGC | 2 cut(s) | 1408, 2791 |
| BsnI | GGCC | 9 cut(s) | 525, 1666, 2316, 3446, 3511, 3544, 3612, 3784, 4480 |
| Bso31I | GGTCTC | 3 cut(s) | 1745, 2953, 3425 |
| BsoBI | CYCGRG | 4 cut(s) | 29, 1920, 2396, 3018 |
| Bsp119I | TTCGAA | 1 cut(s) | 478 |
| Bsp1286I | GDGCHC | 3 cut(s) | 329, 1180, 4260 |
| Bsp13I | TCCGGA | 2 cut(s) | 1235, 2843 |
| Bsp1407I | TGTACA | 2 cut(s) | 1867, 4798 |
| Bsp19I | CCATGG | 2 cut(s) | 67, 4897 |
| BspANI | GGCC | 9 cut(s) | 525, 1666, 2316, 3446, 3511, 3544, 3612, 3784, 4480 |
| BspDI | ATCGAT | 1 cut(s) | 2875 |
| BspEI | TCCGGA | 2 cut(s) | 1235, 2843 |
| BspFNI | CGCG | 3 cut(s) | 456, 1974, 4374 |
| BspHI | TCATGA | 1 cut(s) | 874 |
| BspMAI | CTGCAG | 2 cut(s) | 708, 2512 |
| BspMI | ACCTGC | 3 cut(s) | 111, 1304, 1586 |
| BspOI | GCTAGC | 2 cut(s) | 764, 3657 |
| BspPI | GGATC | 5 cut(s) | 1436, 2943, 2956, 3469, 4091 |
| BspQI | GCTCTTC | 1 cut(s) | 2161 |
| BspT104I | TTCGAA | 1 cut(s) | 478 |
| BspT107I | GGYRCC | 1 cut(s) | 4688 |
| BspTNI | GGTCTC | 3 cut(s) | 1745, 2953, 3425 |
| BsrDI | GCAATG | 6 cut(s) | 16, 168, 1604, 4309, 4405, 5131 |
| BsrFI | RCCGGY | 1 cut(s) | 5215 |
| BsrGI | TGTACA | 2 cut(s) | 1867, 4798 |
| BssAI | RCCGGY | 1 cut(s) | 5215 |
| BssT1I | CCWWGG | 4 cut(s) | 67, 390, 4897, 5365 |
| Bst2UI | CCWGG | 8 cut(s) | 1193, 1663, 2886, 3918, 4245, 4418, 4682, 4891 |
| Bst6I | CTCTTC | 2 cut(s) | 2161, 3748 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4388 |
| BstAUI | TGTACA | 2 cut(s) | 1867, 4798 |
| BstBAI | YACGTR | 2 cut(s) | 3194, 3479 |
| BstBI | TTCGAA | 1 cut(s) | 478 |
| BstDSI | CCRYGG | 4 cut(s) | 67, 2311, 3706, 4897 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 3605, 5194 |
| BstFNI | CGCG | 3 cut(s) | 456, 1974, 4374 |
| BstHHI | GCGC | 6 cut(s) | 456, 655, 1770, 3040, 4374, 4416 |
| BstMAI | GTCTC | 8 cut(s) | 1499, 1745, 2953, 3137, 3398, 3425, 4021, 4175 |
| BstNI | CCWGG | 8 cut(s) | 1193, 1663, 2886, 3918, 4245, 4418, 4682, 4891 |
| BstNSI | RCATGY | 9 cut(s) | 101, 1004, 1768, 1949, 1982, 2090, 2197, 4799, 4846 |
| BstSFI | CTRYAG | 3 cut(s) | 704, 2049, 2508 |
| BstSLI | GKGCMC | 1 cut(s) | 1180 |
| BstSNI | TACGTA | 1 cut(s) | 3194 |
| BstUI | CGCG | 3 cut(s) | 456, 1974, 4374 |
| BstV1I | GCAGC | 7 cut(s) | 788, 808, 821, 1834, 2669, 3753, 3811 |
| BstX2I | RGATCY | 3 cut(s) | 2948, 4096, 4425 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2154, 4463 |
| BstYI | RGATCY | 3 cut(s) | 2948, 4096, 4425 |
| Bsu15I | ATCGAT | 1 cut(s) | 2875 |
| BsuI | GTATCC | 2 cut(s) | 675, 4978 |
| BsuRI | GGCC | 9 cut(s) | 525, 1666, 2316, 3446, 3511, 3544, 3612, 3784, 4480 |
| BsuTUI | ATCGAT | 1 cut(s) | 2875 |
| BtgI | CCRYGG | 4 cut(s) | 67, 2311, 3706, 4897 |
| BtgZI | GCGATG | 3 cut(s) | 3027, 3989, 4947 |
| BtsI | GCAGTG | 2 cut(s) | 964, 2517 |
| BveI | ACCTGC | 3 cut(s) | 111, 1304, 1586 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2507, 2594 |
| CciI | TCATGA | 1 cut(s) | 874 |
| CfoI | GCGC | 6 cut(s) | 456, 655, 1770, 3040, 4374, 4416 |
| Cfr10I | RCCGGY | 1 cut(s) | 5215 |
| ClaI | ATCGAT | 1 cut(s) | 2875 |
| CseI | GACGC | 1 cut(s) | 2361 |
| Csp6I | GTAC | 8 cut(s) | 434, 744, 1868, 2672, 3776, 3800, 4092, 4799 |
| CspAI | ACCGGT | 1 cut(s) | 5215 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2323, 2358 |
| CviQI | GTAC | 8 cut(s) | 434, 744, 1868, 2672, 3776, 3800, 4092, 4799 |
| DraI | TTTAAA | 3 cut(s) | 2925, 3303, 5016 |
| DraIII | CACNNNGTG | 1 cut(s) | 3578 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 980 |
| DriI | GACNNNNNGTC | 2 cut(s) | 2023, 3390 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 980 |
| EaeI | YGGCCR | 2 cut(s) | 2314, 3782 |
| Eam1104I | CTCTTC | 2 cut(s) | 2161, 3748 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 2023, 3390 |
| EarI | CTCTTC | 2 cut(s) | 2161, 3748 |
| Ecl136II | GAGCTC | 1 cut(s) | 4258 |
| Eco105I | TACGTA | 1 cut(s) | 3194 |
| Eco130I | CCWWGG | 4 cut(s) | 67, 390, 4897, 5365 |
| Eco24I | GRGCYC | 1 cut(s) | 4260 |
| Eco31I | GGTCTC | 3 cut(s) | 1745, 2953, 3425 |
| Eco32I | GATATC | 4 cut(s) | 348, 486, 994, 3028 |
| Eco47I | GGWCC | 9 cut(s) | 556, 1059, 1076, 1455, 2157, 2528, 3003, 4123, 4894 |
| Eco53kI | GAGCTC | 1 cut(s) | 4258 |
| Eco57I | CTGAAG | 9 cut(s) | 1848, 2049, 2992, 3018, 3569, 3728, 3881, 5102, 5126 |
| Eco72I | CACGTG | 1 cut(s) | 3479 |
| Eco88I | CYCGRG | 4 cut(s) | 29, 1920, 2396, 3018 |
| EcoICRI | GAGCTC | 1 cut(s) | 4258 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 3605, 5194 |
| EcoO109I | RGGNCCY | 4 cut(s) | 556, 1076, 3003, 4123 |
| EcoRI | GAATTC | 3 cut(s) | 1152, 1612, 3058 |
| EcoRII | CCWGG | 8 cut(s) | 1191, 1661, 2884, 3916, 4243, 4416, 4680, 4889 |
| EcoRV | GATATC | 4 cut(s) | 348, 486, 994, 3028 |
| EcoT14I | CCWWGG | 4 cut(s) | 67, 390, 4897, 5365 |
| EcoT22I | ATGCAT | 5 cut(s) | 938, 2791, 3261, 5188, 5282 |
| EcoT38I | GRGCYC | 1 cut(s) | 4260 |
| ErhI | CCWWGG | 4 cut(s) | 67, 390, 4897, 5365 |
| FaqI | GGGAC | 8 cut(s) | 101, 542, 1089, 2566, 4212, 4322, 4480, 4907 |
| FauI | CCCGC | 2 cut(s) | 4108, 5400 |
| FauNDI | CATATG | 1 cut(s) | 1645 |
| FbaI | TGATCA | 2 cut(s) | 736, 1648 |
| FblI | GTMKAC | 2 cut(s) | 1803, 2048 |
| Fnu4HI | GCNGC | 8 cut(s) | 777, 810, 822, 1823, 2613, 2658, 3767, 3825 |
| FriOI | GRGCYC | 1 cut(s) | 4260 |
| Fsp4HI | GCNGC | 8 cut(s) | 777, 810, 822, 1823, 2613, 2658, 3767, 3825 |
| FspI | TGCGCA | 1 cut(s) | 654 |
| GlaI | GCGC | 6 cut(s) | 455, 654, 1769, 3039, 4373, 4415 |
| GluI | GCNGC | 8 cut(s) | 777, 810, 822, 1823, 2613, 2658, 3767, 3825 |
| GsaI | CCCAGC | 4 cut(s) | 790, 2784, 3984, 4984 |
| GsuI | CTGGAG | 3 cut(s) | 976, 1731, 2397 |
| HaeIII | GGCC | 9 cut(s) | 525, 1666, 2316, 3446, 3511, 3544, 3612, 3784, 4480 |
| HapII | CCGG | 6 cut(s) | 754, 1037, 1236, 1348, 2844, 5216 |
| HgaI | GACGC | 1 cut(s) | 2361 |
| HhaI | GCGC | 6 cut(s) | 456, 655, 1770, 3040, 4374, 4416 |
| Hin6I | GCGC | 6 cut(s) | 454, 653, 1768, 3038, 4372, 4414 |
| HinP1I | GCGC | 6 cut(s) | 454, 653, 1768, 3038, 4372, 4414 |
| HincII | GTYRAC | 4 cut(s) | 1804, 2065, 5088, 5430 |
| HindII | GTYRAC | 4 cut(s) | 1804, 2065, 5088, 5430 |
| HindIII | AAGCTT | 2 cut(s) | 2299, 4138 |
| HpaI | GTTAAC | 1 cut(s) | 5088 |
| HpaII | CCGG | 6 cut(s) | 754, 1037, 1236, 1348, 2844, 5216 |
| Hpy99I | CGWCG | 1 cut(s) | 1808 |
| HpyCH4IV | ACGT | 4 cut(s) | 3193, 3478, 3667, 4886 |
| HpySE526I | ACGT | 4 cut(s) | 3193, 3478, 3667, 4886 |
| HspAI | GCGC | 6 cut(s) | 454, 653, 1768, 3038, 4372, 4414 |
| Kpn2I | TCCGGA | 2 cut(s) | 1235, 2843 |
| Ksp22I | TGATCA | 2 cut(s) | 736, 1648 |
| KspAI | GTTAAC | 1 cut(s) | 5088 |
| LguI | GCTCTTC | 1 cut(s) | 2161 |
| LmnI | GCTCC | 7 cut(s) | 2122, 2275, 2545, 2992, 3708, 3871, 4683 |
| Lsp1109I | GCAGC | 7 cut(s) | 788, 808, 821, 1834, 2669, 3753, 3811 |
| MaeII | ACGT | 4 cut(s) | 3193, 3478, 3667, 4886 |
| MaeIII | GTNAC | 9 cut(s) | 309, 833, 1478, 1852, 1907, 2239, 2503, 3672, 4822 |
| MfeI | CAATTG | 2 cut(s) | 2262, 3584 |
| MflI | RGATCY | 3 cut(s) | 2948, 4096, 4425 |
| MhlI | GDGCHC | 3 cut(s) | 329, 1180, 4260 |
| MlsI | TGGCCA | 1 cut(s) | 2316 |
| MluNI | TGGCCA | 1 cut(s) | 2316 |
| MlyI | GAGTC | 1 cut(s) | 4651 |
| MmeI | TCCRAC | 4 cut(s) | 662, 3661, 3669, 4132 |
| Mox20I | TGGCCA | 1 cut(s) | 2316 |
| Mph1103I | ATGCAT | 5 cut(s) | 938, 2791, 3261, 5188, 5282 |
| MroI | TCCGGA | 2 cut(s) | 1235, 2843 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1360, 2211, 2462, 4224 |
| MscI | TGGCCA | 1 cut(s) | 2316 |
| MslI | CAYNNNNRTG | 9 cut(s) | 931, 2152, 2680, 3053, 3481, 4338, 4461, 5081, 5437 |
| Msp20I | TGGCCA | 1 cut(s) | 2316 |
| MspA1I | CMGCKG | 3 cut(s) | 779, 2491, 4103 |
| MspI | CCGG | 6 cut(s) | 754, 1037, 1236, 1348, 2844, 5216 |
| MssI | GTTTAAAC | 1 cut(s) | 5016 |
| MunI | CAATTG | 2 cut(s) | 2262, 3584 |
| Mva1269I | GAATGC | 2 cut(s) | 1408, 2791 |
| MvaI | CCWGG | 8 cut(s) | 1193, 1663, 2886, 3918, 4245, 4418, 4682, 4891 |
| MvnI | CGCG | 3 cut(s) | 456, 1974, 4374 |
| NciI | CCSGG | 2 cut(s) | 754, 1038 |
| NcoI | CCATGG | 2 cut(s) | 67, 4897 |
| NdeI | CATATG | 1 cut(s) | 1645 |
| NheI | GCTAGC | 2 cut(s) | 760, 3653 |
| NmeAIII | GCCGAG | 2 cut(s) | 2273, 4904 |
| NmuCI | GTSAC | 3 cut(s) | 1907, 2239, 2503 |
| NsbI | TGCGCA | 1 cut(s) | 654 |
| NsiI | ATGCAT | 5 cut(s) | 938, 2791, 3261, 5188, 5282 |
| NspI | RCATGY | 9 cut(s) | 101, 1004, 1768, 1949, 1982, 2090, 2197, 4799, 4846 |
| NspV | TTCGAA | 1 cut(s) | 478 |
| OliI | CACNNNNGTG | 1 cut(s) | 3481 |
| PaeI | GCATGC | 2 cut(s) | 1768, 2090 |
| PaeR7I | CTCGAG | 2 cut(s) | 1920, 3018 |
| PagI | TCATGA | 1 cut(s) | 874 |
| PaqCI | CACCTGC | 2 cut(s) | 111, 1586 |
| PciI | ACATGT | 2 cut(s) | 1945, 4842 |
| PciSI | GCTCTTC | 1 cut(s) | 2161 |
| PctI | GAATGC | 2 cut(s) | 1408, 2791 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1360, 2211, 2462, 4224 |
| PflFI | GACNNNGTC | 1 cut(s) | 1808 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1198 |
| PfoI | TCCNGGA | 1 cut(s) | 4680 |
| PinAI | ACCGGT | 1 cut(s) | 5215 |
| PkrI | GCNGC | 8 cut(s) | 778, 811, 823, 1824, 2614, 2659, 3768, 3826 |
| PleI | GAGTC | 1 cut(s) | 4650 |
| PmaCI | CACGTG | 1 cut(s) | 3479 |
| PmeI | GTTTAAAC | 1 cut(s) | 5016 |
| PmlI | CACGTG | 1 cut(s) | 3479 |
| PpsI | GAGTC | 1 cut(s) | 4650 |
| Ppu21I | YACGTR | 2 cut(s) | 3194, 3479 |
| PpuMI | RGGWCCY | 4 cut(s) | 556, 1076, 3003, 4123 |
| PscI | ACATGT | 2 cut(s) | 1945, 4842 |
| PshBI | ATTAAT | 1 cut(s) | 2150 |
| Psp124BI | GAGCTC | 1 cut(s) | 4260 |
| Psp5II | RGGWCCY | 4 cut(s) | 556, 1076, 3003, 4123 |
| Psp6I | CCWGG | 8 cut(s) | 1191, 1661, 2884, 3916, 4243, 4416, 4680, 4889 |
| PspCI | CACGTG | 1 cut(s) | 3479 |
| PspFI | CCCAGC | 4 cut(s) | 786, 2780, 3980, 4980 |
| PspGI | CCWGG | 8 cut(s) | 1191, 1661, 2884, 3916, 4243, 4416, 4680, 4889 |
| PspPPI | RGGWCCY | 4 cut(s) | 556, 1076, 3003, 4123 |
| PspXI | VCTCGAGB | 1 cut(s) | 3018 |
| PstI | CTGCAG | 2 cut(s) | 708, 2512 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2507, 2594 |
| PsuI | RGATCY | 3 cut(s) | 2948, 4096, 4425 |
| PsyI | GACNNNGTC | 1 cut(s) | 1808 |
| PvuII | CAGCTG | 1 cut(s) | 779 |
| RsaI | GTAC | 8 cut(s) | 435, 745, 1869, 2673, 3777, 3801, 4093, 4800 |
| RsaNI | GTAC | 8 cut(s) | 434, 744, 1868, 2672, 3776, 3800, 4092, 4799 |
| RseI | CAYNNNNRTG | 9 cut(s) | 931, 2152, 2680, 3053, 3481, 4338, 4461, 5081, 5437 |
| SacI | GAGCTC | 1 cut(s) | 4260 |
| SalI | GTCGAC | 1 cut(s) | 1802 |
| SapI | GCTCTTC | 1 cut(s) | 2161 |
| SatI | GCNGC | 8 cut(s) | 777, 810, 822, 1823, 2613, 2658, 3767, 3825 |
| ScaI | AGTACT | 1 cut(s) | 435 |
| SchI | GAGTC | 1 cut(s) | 4651 |
| SduI | GDGCHC | 3 cut(s) | 329, 1180, 4260 |
| SfcI | CTRYAG | 3 cut(s) | 704, 2049, 2508 |
| Sfr274I | CTCGAG | 2 cut(s) | 1920, 3018 |
| SfuI | TTCGAA | 1 cut(s) | 478 |
| SinI | GGWCC | 9 cut(s) | 556, 1059, 1076, 1455, 2157, 2528, 3003, 4123, 4894 |
| SlaI | CTCGAG | 2 cut(s) | 1920, 3018 |
| SmiI | ATTTAAAT | 1 cut(s) | 2925 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 931, 2152, 2680, 3053, 3481, 4338, 4461, 5081, 5437 |
| SmlI | CTYRAG | 5 cut(s) | 156, 1920, 3018, 4111, 4184 |
| SmoI | CTYRAG | 5 cut(s) | 156, 1920, 3018, 4111, 4184 |
| SnaBI | TACGTA | 1 cut(s) | 3194 |
| SphI | GCATGC | 2 cut(s) | 1768, 2090 |
| SspI | AATATT | 3 cut(s) | 1816, 2325, 5419 |
| SstI | GAGCTC | 1 cut(s) | 4260 |
| StyI | CCWWGG | 4 cut(s) | 67, 390, 4897, 5365 |
| SwaI | ATTTAAAT | 1 cut(s) | 2925 |
| TaiI | ACGT | 4 cut(s) | 3196, 3481, 3670, 4889 |
| TaqII | GACCGA | 1 cut(s) | 2977 |
| TatI | WGTACW | 6 cut(s) | 433, 1867, 3775, 3799, 4091, 4798 |
| TauI | GCSGC | 1 cut(s) | 2615 |
| TseFI | GTSAC | 3 cut(s) | 1907, 2239, 2503 |
| TseI | GCWGC | 7 cut(s) | 776, 809, 821, 1822, 2657, 3766, 3824 |
| Tsp45I | GTSAC | 3 cut(s) | 1907, 2239, 2503 |
| TspGWI | ACGGA | 3 cut(s) | 2146, 2300, 3695 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1808 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1198 |
| VpaK11BI | GGWCC | 9 cut(s) | 556, 1059, 1076, 1455, 2157, 2528, 3003, 4123, 4894 |
| VspI | ATTAAT | 1 cut(s) | 2150 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 3605, 5194 |
| XbaI | TCTAGA | 3 cut(s) | 1364, 1700, 2570 |
| XceI | RCATGY | 9 cut(s) | 101, 1004, 1768, 1949, 1982, 2090, 2197, 4799, 4846 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1733 |
| XhoI | CTCGAG | 2 cut(s) | 1920, 3018 |
| XmiI | GTMKAC | 2 cut(s) | 1803, 2048 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1360, 2211, 2462, 4224 |
| ZrmI | AGTACT | 1 cut(s) | 435 |
| Zsp2I | ATGCAT | 5 cut(s) | 938, 2791, 3261, 5188, 5282 |