Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0016204

Physical Location & Seq

Genomic Coordinates Forward (+)

9842565 .. 9844782

Gene Structure 2218 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGCCATCTTACAATCCCCGCCAATTTTTCTCTCTCACCCTCTTCCTCTTCAAACCAAACCCTAACCTCCATCTTCTATATCGCTCGCGGCGATTCTTCTCCAACCAATCATGGCTCTCCGTACGCGGCAATCCCATCATCAAGTGGCCCGCACCACCCGACGTACCCTGCTCCCTCCCGCACCCAAACCCCGCTCCAAACACAAACCCTAACCCTAGCTCCGGCCCCAGTTTTTCACCGATGGACTTCTCCATCATCGCTAACTTGCTCACCGACCCAACCATTTCCCCCGGTTCATCGCTCCAGAGCGCATTGGACCGGACCGGAATCGAGCCGGGTCCGGGTCTGGTACAAGCTGTGTTCGACCACTTCGATTCGTCGCCCAAATTGCTGCACACTCTGTTTCTTTGGGCGGAGAAGCAGCCCGGGTTTCGATCCTCCGCGAAGCTCTTCGGGTCCATGATCAATGTGCTGGCAAAGTCGAGGGAGTTCGACTCCGCCTGGTCTCTGATTCTCAATCGGGTCGGAGGAGATGAGGAGCCCGGTTTGGTTTCGGCTGATACGTTTGTGATCATGATTAGACGGTATACTCGCGCAGGCATGCCCGAATCTGCAATTCGGACTTTTGAGTTTGCGAGTAATTTAGACTCATTTCTCAACTCTGAAGCAGAAATGAGTTTGTTTGAAGTATTATTGGATTCCCTTTCTAAGGAAGGCCTCATTAGGGTGGCTTCAGAATACTTCGATAGGAAAAGGAAGTTGCATCCGAATTGGATTCCATCAGTTCGTGTTTATAATATACTGCTGAATGGATGGTTCCGATCAAGGAAGCTGAAACAGGCAGAGCGGCTTTGGGTGGAAATGAGGAGGGAGAATGTGAAACCTAGTGTTGTAACGTATGGTACACTTGTGGAAGGATACTGCCGGATGCGTCGCGCTGAAATTGCAATTGAGTTGGTGAGCGAGATGAGGAGGGAAGGAGTTGAGCCCAATGCTATTGTGTATAATCCAATAATTGATGCGTTGGGGGAAGCTGGGAGGTTAAAAGAGGCGCTGGGGATGATGGAGCGCTTTTTGGTCCTGGAATCAGGCCCCACTATTTCAACATACAATTCTCTGGTAAAGGGCTATTGCAAGGCTGGAGACCTTGTAGGGGCTAGTAAGATCCTTAAGATGATGATAAGTCGGGGTACTGCCCCTACTCCAACAACCTATAACTACTTCTTTAGGTACTTTTCAAAGCATGGGAAAATTGAGGATGGAATGAACCTTTATACCAAAATGATTGAATCTGGATATACCCCAGATCGGCTTACTTTCCAACTTTTGTTGAAGATGTTGTGCGAGGAGGAGAGATTGGATTTGGCAATTCAAGTTAGCAAGGAAATGAGATCTAGGGGATTGGATATGGATTTAGCTACGAGCACCATGTTGATTCATTTGCTTTGCAATATGCATAAACTCAAAGAGGCTTTTGAAGAGTTTGAGGACATGATACGGAGGGGTTTAGTTCCTCAGTATATTACTTTCCAAAGAATGGATGATGTGTTGAGGAAACAAGGAATGAATCAAATGGCTCGGAAGCTGTGCAAAATGATGTCTTCTGTTCCCCATTCAACAAACTTGCCGGATACATATGTCAGAGATGCAGATGCATCTCGCGCAAGGAGAAAGTCTATAGTTCAGAAGGCCGAAGCAATGTCTGATTTGTTAAAAACTTGTTCAGATCCAAGAGAACTTGTCAAGTTTAGAAGATCGCCTGAAAATCTTGTATCAATAGCGAACCAGTTGATAGAGGATATTAAGAGAAAAGCTAACATCCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009787 GO:0009788 GO:0009791 GO:0009845 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010646 GO:0010648 GO:0016070 GO:0016787 GO:0016788 GO:0023051 GO:0023057 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1900140 GO:1901360 GO:1901363 GO:1901419 GO:1901420 GO:1905957 GO:1905958 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

609

Amino Acids

69.23

Weight (kDa)

9.3

Isoelectric Point (pI)

49.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	260 - 309	2.6e-14	PPR repeat family
PPR_long	PF17177	277 - 382	1.1e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	284 - 344	1.2e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	292 - 324	1.7e-09	PPR repeat
PPR_2	PF13041	295 - 342	9.6e-12	PPR repeat family
PPR	PF01535	298 - 328	4.9e-06	PPR repeat
PPR_1	PF12854	327 - 356	8.2e-06	PPR repeat
PPR_2	PF13041	365 - 410	9e-10	PPR repeat family
PPR_1	PF12854	365 - 393	1e-07	PPR repeat
PPR	PF01535	368 - 397	1.6e-07	PPR repeat
PPR_2	PF13041	403 - 448	1.6e-09	PPR repeat family
PPR_2	PF13041	443 - 484	2.2e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11310
fragaria_vesca	FvH4_2g30070
malus_domestica	MD08G1137400.v1.1
prunus_persica	Prupe.1G467400_v2.0.a1
pyrus_communis	pycom08g11630
rosa_chinensis	RchiOBHm_Chr6g0312841
rosa_laevigata	RLG00000010293
rosa_multiflora	Rmu_sc0008049.1_g000008
rosa_roxburghii	Rroxscaffold_7G00156440
rosa_rugosa	Rorug06G0399900
rosa_samantha	Rh6AG517200 Rh6BG528600 Rh6CG533300 Rh6DG519800
rosa_wichuraiana	Rw6G044930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	795
AccB7I	CCANNNNNTGG	1 cut(s)	1537
AccBSI	CCGCTC	2 cut(s)	194, 847
AccI	GTMKAC	1 cut(s)	587
AccII	CGCG	6 cut(s)	88, 126, 443, 594, 936, 1662
AclWI	GGATC	3 cut(s)	429, 1159, 1721
AcuI	CTGAAG	2 cut(s)	684, 717
AfaI	GTAC	6 cut(s)	123, 165, 351, 904, 1192, 1232
AfeI	AGCGCT	1 cut(s)	1070
AfiI	CCNNNNNNNGG	7 cut(s)	221, 341, 709, 724, 1153, 1308, 1537
AflII	CTTAAG	1 cut(s)	1169
AgsI	TTSAA	9 cut(s)	52, 686, 1104, 1239, 1289, 1333, 1373, 1478, 1617
AjnI	CCWGG	2 cut(s)	500, 1080
AluBI	AGCT	8 cut(s)	219, 356, 448, 832, 1034, 1418, 1585, 1814
AluI	AGCT	8 cut(s)	219, 356, 448, 832, 1034, 1418, 1585, 1814
Alw21I	GWGCWC	1 cut(s)	1427
Alw26I	GTCTC	2 cut(s)	510, 1137
AlwI	GGATC	3 cut(s)	429, 1159, 1721
Ama87I	CYCGRG	1 cut(s)	425
Aor51HI	AGCGCT	1 cut(s)	1070
AoxI	GGCC	5 cut(s)	146, 223, 715, 1090, 1689
ApeKI	GCWGC	2 cut(s)	391, 421
Asp700I	GAANNNNTTC	1 cut(s)	449
AspLEI	GCGC	6 cut(s)	311, 596, 938, 1054, 1071, 1664
AspS9I	GGNCC	8 cut(s)	147, 224, 316, 321, 338, 456, 1078, 1091
AsuC2I	CCSGG	6 cut(s)	291, 336, 342, 426, 427, 543
AsuHPI	GGTGA	4 cut(s)	28, 228, 262, 970
AvaI	CYCGRG	1 cut(s)	425
AvaII	GGWCC	5 cut(s)	316, 321, 338, 456, 1078
BaeI	ACNNNNGTAYC	6 cut(s)	552, 585, 894, 927, 1623, 1656
BanII	GRGCYC	2 cut(s)	543, 990
BbsI	GAAGAC	1 cut(s)	1593
Bbv12I	GWGCWC	1 cut(s)	1427
BbvI	GCAGC	2 cut(s)	378, 433
BccI	CCATC	9 cut(s)	13, 78, 143, 235, 260, 787, 807, 1057, 1253
BciT130I	CCWGG	2 cut(s)	502, 1082
BciVI	GTATCC	2 cut(s)	911, 1624
BclI	TGATCA	2 cut(s)	462, 570
BcnI	CCSGG	6 cut(s)	291, 336, 342, 426, 427, 543
BcoDI	GTCTC	2 cut(s)	510, 1137
BfaI	CTAG	4 cut(s)	216, 885, 1158, 1395
BfmI	CTRYAG	1 cut(s)	1677
BfoI	RGCGCY	2 cut(s)	1055, 1072
BfrI	CTTAAG	1 cut(s)	1169
BfuI	GTATCC	2 cut(s)	911, 1624
BglII	AGATCT	1 cut(s)	1391
BisI	GCNGC	5 cut(s)	89, 127, 392, 422, 848
BlsI	GCNGC	5 cut(s)	90, 128, 393, 423, 849
Bme1390I	CCNGG	8 cut(s)	291, 336, 342, 426, 427, 502, 543, 1082
Bme18I	GGWCC	5 cut(s)	316, 321, 338, 456, 1078
BmeT110I	CYCGRG	1 cut(s)	425
BmgT120I	GGNCC	8 cut(s)	147, 224, 316, 321, 338, 456, 1078, 1091
BmiI	GGNNCC	6 cut(s)	226, 339, 457, 540, 818, 1093
BmrFI	CCNGG	8 cut(s)	291, 336, 342, 426, 427, 502, 543, 1082
BmrI	ACTGGG	1 cut(s)	222
BmsI	GCATC	6 cut(s)	772, 918, 1009, 1636, 1642, 1664
BmuI	ACTGGG	1 cut(s)	222
BpiI	GAAGAC	1 cut(s)	1593
BplI	GAGNNNNNCTC	2 cut(s)	479, 511
BpmI	CTGGAG	2 cut(s)	287, 1161
BpuMI	CCSGG	6 cut(s)	291, 336, 342, 426, 427, 543
BsaI	GGTCTC	2 cut(s)	510, 1137
BsaJI	CCNNGG	2 cut(s)	289, 425
BsaWI	WCCGGW	2 cut(s)	318, 323
BsaXI	ACNNNNNCTCC	4 cut(s)	203, 233, 1134, 1164
Bsc4I	CCNNNNNNNGG	7 cut(s)	221, 341, 709, 724, 1153, 1308, 1537
Bse1I	ACTGG	3 cut(s)	228, 1786, 1822
Bse3DI	GCAATG	1 cut(s)	1704
BseBI	CCWGG	2 cut(s)	502, 1082
BseDI	CCNNGG	2 cut(s)	289, 425
BseGI	GGATG	7 cut(s)	763, 818, 933, 1065, 1264, 1546, 1818
BseLI	CCNNNNNNNGG	7 cut(s)	221, 341, 709, 724, 1153, 1308, 1537
BseMI	GCAATG	1 cut(s)	1704
BseMII	CTCAG	1 cut(s)	1529
BseNI	ACTGG	3 cut(s)	228, 1786, 1822
BseRI	GAGGAG	6 cut(s)	543, 551, 880, 985, 1361, 1364
BseXI	GCAGC	2 cut(s)	378, 433
BseYI	CCCAGC	2 cut(s)	1034, 1054
BsgI	GTGCAG	1 cut(s)	377
Bsh1236I	CGCG	6 cut(s)	88, 126, 443, 594, 936, 1662
BshFI	GGCC	5 cut(s)	148, 225, 717, 1092, 1691
BsiHKAI	GWGCWC	1 cut(s)	1427
BsiHKCI	CYCGRG	1 cut(s)	425
BsiWI	CGTACG	1 cut(s)	121
BslI	CCNNNNNNNGG	7 cut(s)	221, 341, 709, 724, 1153, 1308, 1537
BsmAI	GTCTC	2 cut(s)	510, 1137
BsnI	GGCC	5 cut(s)	148, 225, 717, 1092, 1691
Bso31I	GGTCTC	2 cut(s)	510, 1137
BsoBI	CYCGRG	1 cut(s)	425
Bsp1286I	GDGCHC	3 cut(s)	543, 990, 1427
Bsp143I	GATC	9 cut(s)	434, 462, 570, 821, 1164, 1306, 1391, 1726, 1754
BspANI	GGCC	5 cut(s)	148, 225, 717, 1092, 1691
BspCNI	CTCAG	1 cut(s)	1528
BspFNI	CGCG	6 cut(s)	88, 126, 443, 594, 936, 1662
BspHI	TCATGA	1 cut(s)	573
BspLI	GGNNCC	6 cut(s)	226, 339, 457, 540, 818, 1093
BspPI	GGATC	3 cut(s)	429, 1159, 1721
BspQI	GCTCTTC	1 cut(s)	455
BspTI	CTTAAG	1 cut(s)	1169
BspTNI	GGTCTC	2 cut(s)	510, 1137
BsrBI	CCGCTC	2 cut(s)	194, 847
BsrDI	GCAATG	1 cut(s)	1704
BsrI	ACTGG	3 cut(s)	228, 1786, 1822
BssECI	CCNNGG	2 cut(s)	289, 425
BssMI	GATC	9 cut(s)	434, 462, 570, 821, 1164, 1306, 1391, 1726, 1754
BssNAI	GTATAC	1 cut(s)	588
Bst1107I	GTATAC	1 cut(s)	588
Bst2UI	CCWGG	2 cut(s)	502, 1082
Bst4CI	ACNGT	1 cut(s)	585
Bst6I	CTCTTC	4 cut(s)	47, 53, 455, 1473
BstAFI	CTTAAG	1 cut(s)	1169
BstC8I	GCNNGC	5 cut(s)	86, 150, 474, 598, 602
BstDEI	CTNAG	2 cut(s)	708, 1515
BstENI	CCTNNNNNAGG	1 cut(s)	707
BstF5I	GGATG	7 cut(s)	763, 818, 933, 1065, 1264, 1546, 1818
BstFNI	CGCG	6 cut(s)	88, 126, 443, 594, 936, 1662
BstH2I	RGCGCY	2 cut(s)	1055, 1072
BstHHI	GCGC	6 cut(s)	311, 596, 938, 1054, 1071, 1664
BstKTI	GATC	9 cut(s)	437, 465, 573, 824, 1167, 1309, 1394, 1729, 1757
BstMAI	GTCTC	2 cut(s)	510, 1137
BstMBI	GATC	9 cut(s)	434, 462, 570, 821, 1164, 1306, 1391, 1726, 1754
BstMWI	GCNNNNNNNGC	3 cut(s)	388, 944, 1661
BstNI	CCWGG	2 cut(s)	502, 1082
BstNSI	RCATGY	1 cut(s)	604
BstSCI	CCNGG	8 cut(s)	289, 334, 340, 424, 425, 500, 541, 1080
BstSFI	CTRYAG	1 cut(s)	1677
BstUI	CGCG	6 cut(s)	88, 126, 443, 594, 936, 1662
BstV1I	GCAGC	2 cut(s)	378, 433
BstV2I	GAAGAC	1 cut(s)	1593
BstX2I	RGATCY	3 cut(s)	1164, 1391, 1726
BstYI	RGATCY	3 cut(s)	1164, 1391, 1726
BstZ17I	GTATAC	1 cut(s)	588
BsuI	GTATCC	2 cut(s)	911, 1624
BsuRI	GGCC	5 cut(s)	148, 225, 717, 1092, 1691
BtgZI	GCGATG	2 cut(s)	241, 282
BtsCI	GGATG	7 cut(s)	763, 818, 933, 1065, 1264, 1546, 1818
Cac8I	GCNNGC	5 cut(s)	86, 150, 474, 598, 602
CciI	TCATGA	1 cut(s)	573
CfoI	GCGC	6 cut(s)	311, 596, 938, 1054, 1071, 1664
Cfr13I	GGNCC	8 cut(s)	147, 224, 316, 321, 338, 456, 1078, 1091
Cfr9I	CCCGGG	1 cut(s)	425
CpoI	CGGWCCG	1 cut(s)	321
CseI	GACGC	1 cut(s)	920
Csp6I	GTAC	6 cut(s)	122, 164, 350, 903, 1191, 1231
CspI	CGGWCCG	1 cut(s)	321
CviAII	CATG	7 cut(s)	111, 460, 574, 601, 1244, 1429, 1492
CviQI	GTAC	6 cut(s)	122, 164, 350, 903, 1191, 1231
DdeI	CTNAG	2 cut(s)	708, 1515
DpnI	GATC	9 cut(s)	436, 464, 572, 823, 1166, 1308, 1393, 1728, 1756
DpnII	GATC	9 cut(s)	434, 462, 570, 821, 1164, 1306, 1391, 1726, 1754
Eam1104I	CTCTTC	4 cut(s)	47, 53, 455, 1473
EarI	CTCTTC	4 cut(s)	47, 53, 455, 1473
EciI	GGCGGA	2 cut(s)	428, 487
Eco147I	AGGCCT	1 cut(s)	717
Eco24I	GRGCYC	2 cut(s)	543, 990
Eco31I	GGTCTC	2 cut(s)	510, 1137
Eco47I	GGWCC	5 cut(s)	316, 321, 338, 456, 1078
Eco47III	AGCGCT	1 cut(s)	1070
Eco57I	CTGAAG	2 cut(s)	684, 717
Eco88I	CYCGRG	1 cut(s)	425
EcoNI	CCTNNNNNAGG	1 cut(s)	707
EcoO109I	RGGNCCY	1 cut(s)	1091
EcoRII	CCWGG	2 cut(s)	500, 1080
EcoT22I	ATGCAT	2 cut(s)	1458, 1657
EcoT38I	GRGCYC	2 cut(s)	543, 990
FaeI	CATG	7 cut(s)	114, 463, 577, 604, 1247, 1432, 1495
FatI	CATG	7 cut(s)	110, 459, 573, 600, 1243, 1428, 1491
FauI	CCCGC	4 cut(s)	26, 157, 186, 199
FauNDI	CATATG	1 cut(s)	1636
FbaI	TGATCA	2 cut(s)	462, 570
FblI	GTMKAC	1 cut(s)	587
Fnu4HI	GCNGC	5 cut(s)	89, 127, 392, 422, 848
FokI	GGATG	7 cut(s)	750, 825, 940, 1072, 1271, 1553, 1805
FriOI	GRGCYC	2 cut(s)	543, 990
Fsp4HI	GCNGC	5 cut(s)	89, 127, 392, 422, 848
FspBI	CTAG	4 cut(s)	216, 885, 1158, 1395
GlaI	GCGC	6 cut(s)	310, 595, 937, 1053, 1070, 1663
GluI	GCNGC	5 cut(s)	89, 127, 392, 422, 848
GsaI	CCCAGC	2 cut(s)	1038, 1058
GsuI	CTGGAG	2 cut(s)	287, 1161
HaeII	RGCGCY	2 cut(s)	1055, 1072
HaeIII	GGCC	5 cut(s)	148, 225, 717, 1092, 1691
HgaI	GACGC	1 cut(s)	920
HhaI	GCGC	6 cut(s)	311, 596, 938, 1054, 1071, 1664
Hin1II	CATG	7 cut(s)	114, 463, 577, 604, 1247, 1432, 1495
Hin6I	GCGC	6 cut(s)	309, 594, 936, 1052, 1069, 1662
HinP1I	GCGC	6 cut(s)	309, 594, 936, 1052, 1069, 1662
HphI	GGTGA	4 cut(s)	28, 228, 262, 970
Hpy166II	GTNNAC	2 cut(s)	588, 905
Hpy188III	TCNNGA	3 cut(s)	304, 574, 1293
Hpy8I	GTNNAC	2 cut(s)	588, 905
Hpy99I	CGWCG	3 cut(s)	164, 382, 936
HpyAV	CCTTC	4 cut(s)	707, 908, 971, 1681
HpyCH4III	ACNGT	1 cut(s)	585
HpyCH4IV	ACGT	3 cut(s)	162, 563, 896
HpyF10VI	GCNNNNNNNGC	3 cut(s)	388, 944, 1661
HpyF3I	CTNAG	2 cut(s)	708, 1515
HpySE526I	ACGT	3 cut(s)	162, 563, 896
Hsp92II	CATG	7 cut(s)	114, 463, 577, 604, 1247, 1432, 1495
HspAI	GCGC	6 cut(s)	309, 594, 936, 1052, 1069, 1662
Ksp22I	TGATCA	2 cut(s)	462, 570
Kzo9I	GATC	9 cut(s)	434, 462, 570, 821, 1164, 1306, 1391, 1726, 1754
LguI	GCTCTTC	1 cut(s)	455
LmnI	GCTCC	6 cut(s)	176, 199, 224, 306, 538, 1066
Lsp1109I	GCAGC	2 cut(s)	378, 433
LweI	GCATC	6 cut(s)	772, 918, 1009, 1636, 1642, 1664
MaeI	CTAG	4 cut(s)	216, 885, 1158, 1395
MaeII	ACGT	3 cut(s)	162, 563, 896
MaeIII	GTNAC	1 cut(s)	892
MalI	GATC	9 cut(s)	436, 464, 572, 823, 1166, 1308, 1393, 1728, 1756
MbiI	CCGCTC	2 cut(s)	194, 847
MboI	GATC	9 cut(s)	434, 462, 570, 821, 1164, 1306, 1391, 1726, 1754
MboII	GAAGA	9 cut(s)	34, 40, 65, 88, 442, 1345, 1490, 1593, 1764
MfeI	CAATTG	1 cut(s)	948
MflI	RGATCY	3 cut(s)	1164, 1391, 1726
MhlI	GDGCHC	3 cut(s)	543, 990, 1427
MlyI	GAGTC	2 cut(s)	488, 641
MmeI	TCCRAC	4 cut(s)	126, 505, 1229, 1345
Mph1103I	ATGCAT	2 cut(s)	1458, 1657
MroXI	GAANNNNTTC	1 cut(s)	449
MseI	TTAA	4 cut(s)	1043, 1170, 1712, 1803
MslI	CAYNNNNRTG	1 cut(s)	725
MspCI	CTTAAG	1 cut(s)	1169
MspR9I	CCNGG	8 cut(s)	291, 336, 342, 426, 427, 502, 543, 1082
MunI	CAATTG	1 cut(s)	948
MvaI	CCWGG	2 cut(s)	502, 1082
MvnI	CGCG	6 cut(s)	88, 126, 443, 594, 936, 1662
MwoI	GCNNNNNNNGC	3 cut(s)	388, 944, 1661
NciI	CCSGG	6 cut(s)	291, 336, 342, 426, 427, 543
NdeI	CATATG	1 cut(s)	1636
NdeII	GATC	9 cut(s)	434, 462, 570, 821, 1164, 1306, 1391, 1726, 1754
NlaIII	CATG	7 cut(s)	114, 463, 577, 604, 1247, 1432, 1495
NlaIV	GGNNCC	6 cut(s)	226, 339, 457, 540, 818, 1093
NsiI	ATGCAT	2 cut(s)	1458, 1657
NspI	RCATGY	1 cut(s)	604
PaeI	GCATGC	1 cut(s)	604
PagI	TCATGA	1 cut(s)	573
PceI	AGGCCT	1 cut(s)	717
PciSI	GCTCTTC	1 cut(s)	455
PcsI	WCGNNNNNNNCGW	3 cut(s)	88, 369, 560
PdmI	GAANNNNTTC	1 cut(s)	449
Pfl23II	CGTACG	1 cut(s)	121
PflMI	CCANNNNNTGG	1 cut(s)	1537
PfoI	TCCNGGA	1 cut(s)	1080
PkrI	GCNGC	5 cut(s)	90, 128, 393, 423, 849
PleI	GAGTC	2 cut(s)	488, 641
PpsI	GAGTC	2 cut(s)	488, 641
PsiI	TTATAA	1 cut(s)	795
Psp6I	CCWGG	2 cut(s)	500, 1080
PspFI	CCCAGC	2 cut(s)	1034, 1054
PspGI	CCWGG	2 cut(s)	500, 1080
PspLI	CGTACG	1 cut(s)	121
PspN4I	GGNNCC	6 cut(s)	226, 339, 457, 540, 818, 1093
PspPI	GGNCC	8 cut(s)	147, 224, 316, 321, 338, 456, 1078, 1091
PsuI	RGATCY	3 cut(s)	1164, 1391, 1726
RsaI	GTAC	6 cut(s)	123, 165, 351, 904, 1192, 1232
RsaNI	GTAC	6 cut(s)	122, 164, 350, 903, 1191, 1231
RseI	CAYNNNNRTG	1 cut(s)	725
Rsr2I	CGGWCCG	1 cut(s)	321
RsrII	CGGWCCG	1 cut(s)	321
SapI	GCTCTTC	1 cut(s)	455
SaqAI	TTAA	4 cut(s)	1043, 1170, 1712, 1803
SatI	GCNGC	5 cut(s)	89, 127, 392, 422, 848
Sau3AI	GATC	9 cut(s)	434, 462, 570, 821, 1164, 1306, 1391, 1726, 1754
Sau96I	GGNCC	8 cut(s)	147, 224, 316, 321, 338, 456, 1078, 1091
SchI	GAGTC	2 cut(s)	488, 641
ScrFI	CCNGG	8 cut(s)	291, 336, 342, 426, 427, 502, 543, 1082
SduI	GDGCHC	3 cut(s)	543, 990, 1427
SfaNI	GCATC	6 cut(s)	772, 918, 1009, 1636, 1642, 1664
SfcI	CTRYAG	1 cut(s)	1677
SinI	GGWCC	5 cut(s)	316, 321, 338, 456, 1078
SmaI	CCCGGG	1 cut(s)	427
SmiMI	CAYNNNNRTG	1 cut(s)	725
SmlI	CTYRAG	1 cut(s)	1169
SmoI	CTYRAG	1 cut(s)	1169
SphI	GCATGC	1 cut(s)	604
SseBI	AGGCCT	1 cut(s)	717
SspMI	CTAG	4 cut(s)	216, 885, 1158, 1395
StuI	AGGCCT	1 cut(s)	717
StyD4I	CCNGG	8 cut(s)	289, 334, 340, 424, 425, 500, 541, 1080
TaaI	ACNGT	1 cut(s)	585
TaiI	ACGT	3 cut(s)	165, 566, 899
TaqI	TCGA	7 cut(s)	330, 363, 372, 433, 482, 492, 744
TauI	GCSGC	3 cut(s)	91, 129, 850
Tru1I	TTAA	4 cut(s)	1043, 1170, 1712, 1803
Tru9I	TTAA	4 cut(s)	1043, 1170, 1712, 1803
TseI	GCWGC	2 cut(s)	391, 421
TspDTI	ATGAA	4 cut(s)	285, 1280, 1427, 1580
TspGWI	ACGGA	2 cut(s)	109, 1513
TspMI	CCCGGG	1 cut(s)	425
Van91I	CCANNNNNTGG	1 cut(s)	1537
Vha464I	CTTAAG	1 cut(s)	1169
VpaK11BI	GGWCC	5 cut(s)	316, 321, 338, 456, 1078
XagI	CCTNNNNNAGG	1 cut(s)	707
XceI	RCATGY	1 cut(s)	604
XmaI	CCCGGG	1 cut(s)	425
XmiI	GTMKAC	1 cut(s)	587
XmnI	GAANNNNTTC	1 cut(s)	449
XspI	CTAG	4 cut(s)	216, 885, 1158, 1395
Zsp2I	ATGCAT	2 cut(s)	1458, 1657

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.