WD repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g28620 FvH4_2g28630 |
| prunus_persica | Prupe.1G484500_v2.0.a1 |
| pyrus_communis | pycom08g13020 pycom15g11630 |
| rosa_laevigata | RLG00000011602 |
| rosa_multiflora | Rmu_sc0004989.1_g000004 Rmu_sc0004989.1_g000008 |
| rosa_roxburghii | Rroxscaffold_7G00170540 Rroxscaffold_7G00170550 |
| rosa_rugosa | Rorug06G0271700 |
| rosa_samantha | Rh6AG383000 Rh6BG391300 Rh6BG391400 Rh6CG396300 Rh6CG396400 Rh6DG383600 Rh6DG383800 |
| rosa_wichuraiana | Rw6G033350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 428 |
| AcsI | RAATTY | 4 cut(s) | 242, 331, 495, 564 |
| AcuI | CTGAAG | 2 cut(s) | 94, 377 |
| AfaI | GTAC | 3 cut(s) | 170, 323, 618 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 647 |
| AgsI | TTSAA | 3 cut(s) | 128, 175, 416 |
| AjiI | CACGTC | 1 cut(s) | 470 |
| AjnI | CCWGG | 1 cut(s) | 640 |
| AleI | CACNNNNGTG | 1 cut(s) | 188 |
| AluBI | AGCT | 3 cut(s) | 77, 114, 229 |
| AluI | AGCT | 3 cut(s) | 77, 114, 229 |
| Alw26I | GTCTC | 1 cut(s) | 399 |
| AoxI | GGCC | 2 cut(s) | 459, 520 |
| ApeKI | GCWGC | 2 cut(s) | 5, 584 |
| ApoI | RAATTY | 4 cut(s) | 242, 331, 495, 564 |
| AseI | ATTAAT | 2 cut(s) | 438, 666 |
| AspS9I | GGNCC | 1 cut(s) | 459 |
| AsuHPI | GGTGA | 1 cut(s) | 175 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 361, 394 |
| BauI | CACGAG | 1 cut(s) | 570 |
| BbvI | GCAGC | 1 cut(s) | 596 |
| BceAI | ACGGC | 2 cut(s) | 193, 304 |
| BciT130I | CCWGG | 1 cut(s) | 642 |
| BcoDI | GTCTC | 1 cut(s) | 399 |
| BfaI | CTAG | 1 cut(s) | 533 |
| BfmI | CTRYAG | 1 cut(s) | 508 |
| BisI | GCNGC | 3 cut(s) | 6, 429, 585 |
| BlsI | GCNGC | 3 cut(s) | 7, 430, 586 |
| BmcAI | AGTACT | 1 cut(s) | 170 |
| Bme1390I | CCNGG | 1 cut(s) | 642 |
| BmgBI | CACGTC | 1 cut(s) | 470 |
| BmgT120I | GGNCC | 1 cut(s) | 459 |
| BmiI | GGNNCC | 1 cut(s) | 460 |
| BmrFI | CCNGG | 1 cut(s) | 642 |
| BmsI | GCATC | 2 cut(s) | 13, 584 |
| BpmI | CTGGAG | 1 cut(s) | 564 |
| BpuEI | CTTGAG | 1 cut(s) | 107 |
| BsaI | GGTCTC | 1 cut(s) | 399 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 647 |
| Bse3DI | GCAATG | 2 cut(s) | 438, 608 |
| BseBI | CCWGG | 1 cut(s) | 642 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 647 |
| BseMI | GCAATG | 2 cut(s) | 438, 608 |
| BseRI | GAGGAG | 2 cut(s) | 290, 534 |
| BseXI | GCAGC | 1 cut(s) | 596 |
| Bsh1285I | CGRYCG | 1 cut(s) | 351 |
| BshFI | GGCC | 2 cut(s) | 461, 522 |
| BsiEI | CGRYCG | 1 cut(s) | 351 |
| BsiSI | CCGG | 1 cut(s) | 99 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 647 |
| BsmAI | GTCTC | 1 cut(s) | 399 |
| BsnI | GGCC | 2 cut(s) | 461, 522 |
| Bso31I | GGTCTC | 1 cut(s) | 399 |
| Bsp1407I | TGTACA | 1 cut(s) | 616 |
| BspACI | CCGC | 1 cut(s) | 428 |
| BspANI | GGCC | 2 cut(s) | 461, 522 |
| BspLI | GGNNCC | 1 cut(s) | 460 |
| BspTNI | GGTCTC | 1 cut(s) | 399 |
| BsrDI | GCAATG | 2 cut(s) | 438, 608 |
| BsrGI | TGTACA | 1 cut(s) | 616 |
| BssSI | CACGAG | 1 cut(s) | 570 |
| Bst2BI | CACGAG | 1 cut(s) | 570 |
| Bst2UI | CCWGG | 1 cut(s) | 642 |
| Bst4CI | ACNGT | 2 cut(s) | 190, 512 |
| Bst6I | CTCTTC | 1 cut(s) | 159 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 425 |
| BstAUI | TGTACA | 1 cut(s) | 616 |
| BstC8I | GCNNGC | 1 cut(s) | 116 |
| BstMAI | GTCTC | 1 cut(s) | 399 |
| BstMCI | CGRYCG | 1 cut(s) | 351 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 235, 425, 533, 581 |
| BstNI | CCWGG | 1 cut(s) | 642 |
| BstSCI | CCNGG | 1 cut(s) | 640 |
| BstSFI | CTRYAG | 1 cut(s) | 508 |
| BstV1I | GCAGC | 1 cut(s) | 596 |
| BsuRI | GGCC | 2 cut(s) | 461, 522 |
| BtrI | CACGTC | 1 cut(s) | 470 |
| BtsIMutI | CAGTG | 1 cut(s) | 195 |
| Cac8I | GCNNGC | 1 cut(s) | 116 |
| Cfr13I | GGNCC | 1 cut(s) | 459 |
| Csp6I | GTAC | 3 cut(s) | 169, 322, 617 |
| CviAII | CATG | 3 cut(s) | 194, 296, 368 |
| CviQI | GTAC | 3 cut(s) | 169, 322, 617 |
| Eam1104I | CTCTTC | 1 cut(s) | 159 |
| EarI | CTCTTC | 1 cut(s) | 159 |
| Eco31I | GGTCTC | 1 cut(s) | 399 |
| Eco32I | GATATC | 1 cut(s) | 491 |
| Eco57I | CTGAAG | 2 cut(s) | 94, 377 |
| EcoRI | GAATTC | 1 cut(s) | 495 |
| EcoRII | CCWGG | 1 cut(s) | 640 |
| EcoRV | GATATC | 1 cut(s) | 491 |
| FaeI | CATG | 3 cut(s) | 197, 299, 371 |
| FaiI | YATR | 9 cut(s) | 121, 195, 273, 297, 359, 369, 402, 443, 554 |
| FatI | CATG | 3 cut(s) | 193, 295, 367 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 429, 585 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 429, 585 |
| FspBI | CTAG | 1 cut(s) | 533 |
| GluI | GCNGC | 3 cut(s) | 6, 429, 585 |
| GsuI | CTGGAG | 1 cut(s) | 564 |
| HaeIII | GGCC | 2 cut(s) | 461, 522 |
| HapII | CCGG | 1 cut(s) | 99 |
| Hin1II | CATG | 3 cut(s) | 197, 299, 371 |
| HinfI | GANTC | 1 cut(s) | 95 |
| HpaII | CCGG | 1 cut(s) | 99 |
| HphI | GGTGA | 1 cut(s) | 175 |
| Hpy188I | TCNGA | 2 cut(s) | 488, 650 |
| HpyAV | CCTTC | 2 cut(s) | 208, 322 |
| HpyCH4III | ACNGT | 2 cut(s) | 190, 512 |
| HpyCH4IV | ACGT | 2 cut(s) | 372, 469 |
| HpyCH4V | TGCA | 4 cut(s) | 43, 193, 341, 562 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 235, 425, 533, 581 |
| HpySE526I | ACGT | 2 cut(s) | 372, 469 |
| Hsp92II | CATG | 3 cut(s) | 197, 299, 371 |
| Lsp1109I | GCAGC | 1 cut(s) | 596 |
| LweI | GCATC | 2 cut(s) | 13, 584 |
| MaeI | CTAG | 1 cut(s) | 533 |
| MaeII | ACGT | 2 cut(s) | 372, 469 |
| MboII | GAAGA | 4 cut(s) | 100, 140, 176, 311 |
| MluCI | AATT | 5 cut(s) | 242, 331, 495, 564, 672 |
| MmeI | TCCRAC | 1 cut(s) | 623 |
| MseI | TTAA | 2 cut(s) | 438, 666 |
| MslI | CAYNNNNRTG | 1 cut(s) | 188 |
| MspI | CCGG | 1 cut(s) | 99 |
| MspR9I | CCNGG | 1 cut(s) | 642 |
| MvaI | CCWGG | 1 cut(s) | 642 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 235, 425, 533, 581 |
| NlaIII | CATG | 3 cut(s) | 197, 299, 371 |
| NlaIV | GGNNCC | 1 cut(s) | 460 |
| OliI | CACNNNNGTG | 1 cut(s) | 188 |
| PfeI | GAWTC | 1 cut(s) | 95 |
| PkrI | GCNGC | 3 cut(s) | 7, 430, 586 |
| PshBI | ATTAAT | 2 cut(s) | 438, 666 |
| Psp6I | CCWGG | 1 cut(s) | 640 |
| PspGI | CCWGG | 1 cut(s) | 640 |
| PspN4I | GGNNCC | 1 cut(s) | 460 |
| PspPI | GGNCC | 1 cut(s) | 459 |
| RsaI | GTAC | 3 cut(s) | 170, 323, 618 |
| RsaNI | GTAC | 3 cut(s) | 169, 322, 617 |
| RseI | CAYNNNNRTG | 1 cut(s) | 188 |
| SaqAI | TTAA | 2 cut(s) | 438, 666 |
| SatI | GCNGC | 3 cut(s) | 6, 429, 585 |
| Sau96I | GGNCC | 1 cut(s) | 459 |
| ScaI | AGTACT | 1 cut(s) | 170 |
| ScrFI | CCNGG | 1 cut(s) | 642 |
| SfaNI | GCATC | 2 cut(s) | 13, 584 |
| SfcI | CTRYAG | 1 cut(s) | 508 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 188 |
| SmlI | CTYRAG | 1 cut(s) | 86 |
| SmoI | CTYRAG | 1 cut(s) | 86 |
| Sse9I | AATT | 5 cut(s) | 242, 331, 495, 564, 672 |
| SsiI | CCGC | 1 cut(s) | 428 |
| SspMI | CTAG | 1 cut(s) | 533 |
| StyD4I | CCNGG | 1 cut(s) | 640 |
| TaaI | ACNGT | 2 cut(s) | 190, 512 |
| TaiI | ACGT | 2 cut(s) | 375, 472 |
| TaqI | TCGA | 2 cut(s) | 79, 493 |
| TaqII | GACCGA | 1 cut(s) | 365 |
| TasI | AATT | 5 cut(s) | 242, 331, 495, 564, 672 |
| TatI | WGTACW | 2 cut(s) | 168, 616 |
| TauI | GCSGC | 1 cut(s) | 431 |
| TfiI | GAWTC | 1 cut(s) | 95 |
| Tru1I | TTAA | 2 cut(s) | 438, 666 |
| Tru9I | TTAA | 2 cut(s) | 438, 666 |
| TscAI | CASTG | 1 cut(s) | 195 |
| TseI | GCWGC | 2 cut(s) | 5, 584 |
| TspDTI | ATGAA | 4 cut(s) | 127, 300, 312, 374 |
| TspGWI | ACGGA | 1 cut(s) | 159 |
| TspRI | CASTG | 1 cut(s) | 195 |
| VspI | ATTAAT | 2 cut(s) | 438, 666 |
| XapI | RAATTY | 4 cut(s) | 242, 331, 495, 564 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 469, 512 |
| XspI | CTAG | 1 cut(s) | 533 |
| ZrmI | AGTACT | 1 cut(s) | 170 |