pycom08g15510

pumilio homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0012349
Physical Location & Seq
Forward (+)
15262260 .. 15266003
3744 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g15510.3

Sequence Viewer

Length: 2145 bp
ATGATGTACAAAATATCTGAGGACAAGAGGGTTTTACAGAGGGAAGGAGGAGAGCTGGAAAAGCTCTGGAATGAGAATCCCACTAGGAATCAACATTATTCCAGTCTTTTCCACCTCCTTCATCCTCCGCACCAACACCACTTTCTCGGCGACTCTCCGGTGAGCAGAGCCTCTCTGCCGTCGGAGTTCTCTCCGTCGAGCTCTTTCTCAAATGGGTTCTATTCCTCCGGCGACGGTTCTCCGTCTCCGTATTCAACCCCATTTGAAGGGGCAAAGTATCAAACACCTTACGTGAACGGGTTGTGCCTGGACTCTAAGCCGCCCCCGAATGATCTGGGTTTGGCTGAGCGTTTCTATAGGATGCATATTGGGGAAGAACAGGAAAATGGGACTAAAAGGAGGCGATTTGAGAGAGGCCCAGATGGGATTGGACTCGGTGGTGGGTTTTTTGGGGGGACTAGTCCTTGGAATGCTGAAAACTATGGCCTATTTGAGAGTTCTAAGAACAATGTTTCGGATTTTGATGGGTTTCAATCTGCGGGTTTGGGAGGTAGAGGGAGATTTGGTAGGACTATGGAGTCAGCAATACTTGGATTGCAGCCGAAATGCACTGTTGGCGATTCAATGGGGTCTTTTCGCAATCATATGCAACCCAATGCTTTGTATTCTGGGCCTAGTTGTGTTAAAAGAATGGAACAGGGAGATGGCTGGTATCAGAGGAACCCATCTAGTGCTAGGTCTTACCCAGATGAGGACTACTTTTGCTTACAGCCACGTGAATCGGGTTCTAGTGACGGAAAGGGTCTTATGTATCCGATGAGTTCCCCTCAGTTCCCCTCGGCTGCTAAGTTGAATGTGGACAATCTTTCACATAACCATTCAATGATAAAACAAAGGACTAGAGTGAATCCAACTAGTGGGCTTCCTGAATCTTTCAAGTCCATGAATTGTGCACGGGACTTTGAGGGTTATGGTTGCGAGGATAGTTCCATCATGCAAGGAAACCATTTGAATCACACCACCAGTAAAGGTAGCAAGTCTTCAAGGGGCTACAAGAACTCTTGCTCTAAGATGGCAATGCCGACAGGAGAGAAAAGCTCCAGACTTGATTCCGATTCATATGATGGTGGAAATGAATGGAGCCAGAGTGACAATAACTCATTTTGGTCAGTTCTAAGTTTGAGTTCATTGGCTGAGGAATATATATATTTCATTGCAAAGGATCAGTACGGCTGTCGGTTCTTACAAAGGATGCTTGATGAGGGGACTAGCCAAGATTTGCAACTAATATTTGACAAAATAATCAACCATGTTTTCGAACTTATGACAAACCCGTTTGGCAATTACCTTATGCAGAAGTTGTTGGATGTTTGCAATGAACAACAAAGAATGCAATTTGTAATCAAGGTGATAAAAGAACCAGGACAGCTTGTCAGAGTTTCCTTAGACACACATGGGACTCGTGTGGTACAGAAATTGATTGAGACTGTGAAACCTGGGAAACAGATAGCGTTAGTTAAATCGTCCCTTGAATGCGGTTTTCTTGATCATATTAAGGATCCAAATGGCAATCATGTAGTACAACGTTGCTTGGATTGCTTTAGCAACGAAGACAATAAGTTTATTTTTGATGCTGCTGCAAGATATTGTGTCGAGATTGCAACTCAACGCCATGGATGCTGTGTACTACAAAAATGCATTGCACATGCCATTGGGAGACATCGAGATAAGCTGATCATTGAAATTTCAAGAAATGGGCTTCTCCTTTCACAAGATCCTTATGGGAATTATGTTGTTCAATATGTGATAGAACTGAAGATCCCATCTGCCATGGCCAAACTGACTACTCAGTTAAAAGGAAATTTTGTACGCCTCTCCATGCAGAAGTGCAGTAGTCATGTTGTTGAAAAGTGCCTCAAGTATTTTGAAGAGAGCCGTCCTAAAATCATCCACGAATTGCTCTCATTTCCGCGTTTTGATCAGTTGCTACAAGACCCTTATGCGAACTACGTGATTCAATCTGCTCTTGGAGTTACAAAGGGCCCTCTTCATGCTGCTCTGGTCGAAGCAGTGAAGCCTCATACAATCTTACGCACCAGTCCATACTGCAAGAGGATTTTCTCAAGGGACCTTCTGAAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PUF

Protein Analysis

715

Amino Acids

80.28

Weight (kDa)

8.45

Isoelectric Point (pI)

49.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22240 AT1G78160 AT1G78160
fragaria_vesca FvH4_5g37620
malus_domestica MD08G1181900.v1.1 MD15G1367200.v1.1
prunus_persica Prupe.1G515100_v2.0.a1
pyrus_communis pycom08g15510 pycom15g32920
rosa_chinensis RchiOBHm_Chr7g0239301
rosa_laevigata RLG00000000765
rosa_multiflora Rmu_sc0007840.1_g000004
rosa_roxburghii Rroxscaffold_3G00221040
rosa_rugosa Rorug07G0327100
rosa_samantha Rh7AG480500 Rh7BG453200 Rh7CG498400 Rh7DG466500
rosa_wichuraiana Rw7G040250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 577
AccB7I CCANNNNNTGG 1 cut(s) 917
AccII CGCG 1 cut(s) 1972
AciI CCGC 5 cut(s) 128, 320, 539, 1536, 1970
AclI AACGTT 1 cut(s) 1585
AclWI GGATC 5 cut(s) 1230, 1553, 1566, 1769, 1813
AcoI YGGCCR 1 cut(s) 1833
AcsI RAATTY 2 cut(s) 1743, 1861
AcuI CTGAAG 1 cut(s) 1835
AcvI CACGTG 1 cut(s) 776
AfaI GTAC 6 cut(s) 8, 1229, 1470, 1581, 1686, 1869
AfiI CCNNNNNNNGG 3 cut(s) 266, 751, 917
AhdI GACNNNNNGTC 1 cut(s) 1430
AhlI ACTAGT 2 cut(s) 458, 914
AjnI CCWGG 3 cut(s) 306, 1420, 1495
AjuI GAANNNNNNNTTGG 2 cut(s) 126, 158
AloI GAACNNNNNNTCC 2 cut(s) 1803, 1835
AluBI AGCT 6 cut(s) 55, 64, 201, 1098, 1429, 1732
AluI AGCT 6 cut(s) 55, 64, 201, 1098, 1429, 1732
Alw21I GWGCWC 2 cut(s) 203, 955
Alw26I GTCTC 3 cut(s) 249, 1478, 1711
Alw44I GTGCAC 1 cut(s) 951
AlwI GGATC 5 cut(s) 1230, 1553, 1566, 1769, 1813
AoxI GGCC 5 cut(s) 415, 484, 671, 1833, 2041
ApaI GGGCCC 1 cut(s) 2045
ApaLI GTGCAC 1 cut(s) 951
ApeKI GCWGC 5 cut(s) 598, 842, 1634, 1637, 2054
ApoI RAATTY 2 cut(s) 1743, 1861
AspS9I GGNCC 5 cut(s) 416, 671, 2041, 2042, 2128
AsuHPI GGTGA 2 cut(s) 172, 1420
AsuII TTCGAA 1 cut(s) 1317
AvaII GGWCC 1 cut(s) 2128
BaeGI GKGCMC 2 cut(s) 955, 2045
BalI TGGCCA 1 cut(s) 1835
BamHI GGATCC 1 cut(s) 1558
BanII GRGCYC 2 cut(s) 203, 2045
BarI GAAGNNNNNNTAC 2 cut(s) 1024, 1056
BauI CACGAG 1 cut(s) 1461
BbrPI CACGTG 1 cut(s) 776
BbsI GAAGAC 2 cut(s) 1032, 1617
Bbv12I GWGCWC 2 cut(s) 203, 955
BbvCI CCTCAGC 1 cut(s) 1194
BbvI GCAGC 5 cut(s) 610, 829, 1621, 1624, 2041
BccI CCATC 8 cut(s) 416, 518, 698, 733, 998, 1066, 1118, 1831
BceAI ACGGC 3 cut(s) 163, 1246, 1920
BciT130I CCWGG 3 cut(s) 308, 1422, 1497
BciVI GTATCC 1 cut(s) 822
BclI TGATCA 3 cut(s) 1546, 1734, 1978
BcoDI GTCTC 3 cut(s) 249, 1478, 1711
BcuI ACTAGT 2 cut(s) 458, 914
BfaI CTAG 9 cut(s) 84, 459, 675, 729, 735, 789, 900, 915, 1269
BfmI CTRYAG 1 cut(s) 355
BfuI GTATCC 1 cut(s) 822
BisI GCNGC 6 cut(s) 320, 599, 843, 1635, 1638, 2055
BlpI GCTNAGC 1 cut(s) 345
BlsI GCNGC 6 cut(s) 321, 600, 844, 1636, 1639, 2056
Bme1390I CCNGG 3 cut(s) 308, 1422, 1497
Bme18I GGWCC 1 cut(s) 2128
BmeRI GACNNNNNGTC 1 cut(s) 1430
BmgT120I GGNCC 5 cut(s) 416, 671, 2041, 2042, 2128
BmiI GGNNCC 5 cut(s) 722, 1142, 1560, 2043, 2129
BmrFI CCNGG 3 cut(s) 308, 1422, 1497
BmsI GCATC 4 cut(s) 351, 1242, 1621, 1667
BpiI GAAGAC 2 cut(s) 1032, 1617
BplI GAGNNNNNCTC 4 cut(s) 811, 843, 1082, 1114
BpmI CTGGAG 1 cut(s) 1084
Bpu10I CCTNAGC 1 cut(s) 1194
Bpu1102I GCTNAGC 1 cut(s) 345
Bpu14I TTCGAA 1 cut(s) 1317
BpuEI CTTGAG 2 cut(s) 1901, 2107
BsaAI YACGTR 3 cut(s) 292, 776, 2011
BsaJI CCNNGG 5 cut(s) 464, 837, 1496, 1672, 1830
BsaWI WCCGGW 1 cut(s) 157
BsaXI ACNNNNNCTCC 4 cut(s) 550, 580, 1132, 1162
Bsc4I CCNNNNNNNGG 3 cut(s) 266, 751, 917
Bse1I ACTGG 3 cut(s) 102, 1023, 2097
Bse3DI GCAATG 4 cut(s) 1083, 1212, 1381, 1698
BseBI CCWGG 3 cut(s) 308, 1422, 1497
BseDI CCNNGG 5 cut(s) 464, 837, 1496, 1672, 1830
BseGI GGATG 6 cut(s) 121, 366, 1257, 1372, 1682, 1947
BseLI CCNNNNNNNGG 3 cut(s) 266, 751, 917
BseMI GCAATG 4 cut(s) 1083, 1212, 1381, 1698
BseMII CTCAG 5 cut(s) 9, 336, 842, 1185, 1862
BseNI ACTGG 3 cut(s) 102, 1023, 2097
BseRI GAGGAG 1 cut(s) 63
BseSI GKGCMC 2 cut(s) 955, 2045
BseXI GCAGC 5 cut(s) 610, 829, 1621, 1624, 2041
BsgI GTGCAG 1 cut(s) 1909
Bsh1236I CGCG 1 cut(s) 1972
BshFI GGCC 5 cut(s) 417, 486, 673, 1835, 2043
BsiHKAI GWGCWC 2 cut(s) 203, 955
BsiSI CCGG 2 cut(s) 158, 228
BslFI GGGAC 7 cut(s) 403, 469, 971, 1279, 1471, 1510, 2141
BslI CCNNNNNNNGG 3 cut(s) 266, 751, 917
BsmAI GTCTC 3 cut(s) 249, 1478, 1711
BsmBI CGTCTC 1 cut(s) 249
BsmFI GGGAC 7 cut(s) 403, 469, 971, 1279, 1471, 1510, 2141
BsmI GAATGC 3 cut(s) 475, 1395, 1538
BsnI GGCC 5 cut(s) 417, 486, 673, 1835, 2043
Bsp119I TTCGAA 1 cut(s) 1317
Bsp120I GGGCCC 1 cut(s) 2041
Bsp1286I GDGCHC 3 cut(s) 203, 955, 2045
Bsp1407I TGTACA 1 cut(s) 6
Bsp143I GATC 8 cut(s) 331, 1222, 1546, 1558, 1734, 1774, 1818, 1978
Bsp1720I GCTNAGC 1 cut(s) 345
Bsp19I CCATGG 2 cut(s) 1672, 1830
BspACI CCGC 5 cut(s) 128, 320, 539, 1536, 1970
BspANI GGCC 5 cut(s) 417, 486, 673, 1835, 2043
BspCNI CTCAG 5 cut(s) 10, 337, 841, 1186, 1861
BspFNI CGCG 1 cut(s) 1972
BspLI GGNNCC 5 cut(s) 722, 1142, 1560, 2043, 2129
BspPI GGATC 5 cut(s) 1230, 1553, 1566, 1769, 1813
BspT104I TTCGAA 1 cut(s) 1317
BsrDI GCAATG 4 cut(s) 1083, 1212, 1381, 1698
BsrGI TGTACA 1 cut(s) 6
BsrI ACTGG 3 cut(s) 102, 1023, 2097
BssECI CCNNGG 5 cut(s) 464, 837, 1496, 1672, 1830
BssMI GATC 8 cut(s) 331, 1222, 1546, 1558, 1734, 1774, 1818, 1978
BssSI CACGAG 1 cut(s) 1461
BssT1I CCWWGG 3 cut(s) 464, 1672, 1830
Bst2BI CACGAG 1 cut(s) 1461
Bst2UI CCWGG 3 cut(s) 308, 1422, 1497
Bst4CI ACNGT 3 cut(s) 236, 613, 1489
Bst6I CTCTTC 2 cut(s) 1923, 2052
BstAUI TGTACA 1 cut(s) 6
BstBAI YACGTR 3 cut(s) 292, 776, 2011
BstBI TTCGAA 1 cut(s) 1317
BstDSI CCRYGG 2 cut(s) 1672, 1830
BstF5I GGATG 6 cut(s) 121, 366, 1257, 1372, 1682, 1947
BstFNI CGCG 1 cut(s) 1972
BstKTI GATC 8 cut(s) 334, 1225, 1549, 1561, 1737, 1777, 1821, 1981
BstMAI GTCTC 3 cut(s) 249, 1478, 1711
BstMBI GATC 8 cut(s) 331, 1222, 1546, 1558, 1734, 1774, 1818, 1978
BstMWI GCNNNNNNNGC 4 cut(s) 61, 615, 1596, 1677
BstNI CCWGG 3 cut(s) 308, 1422, 1497
BstNSI RCATGY 1 cut(s) 1709
BstSCI CCNGG 3 cut(s) 306, 1420, 1495
BstSFI CTRYAG 1 cut(s) 355
BstSLI GKGCMC 2 cut(s) 955, 2045
BstUI CGCG 1 cut(s) 1972
BstV1I GCAGC 5 cut(s) 610, 829, 1621, 1624, 2041
BstV2I GAAGAC 2 cut(s) 1032, 1617
BstX2I RGATCY 3 cut(s) 1558, 1774, 1818
BstYI RGATCY 3 cut(s) 1558, 1774, 1818
BsuI GTATCC 1 cut(s) 822
BsuRI GGCC 5 cut(s) 417, 486, 673, 1835, 2043
BtgI CCRYGG 2 cut(s) 1672, 1830
BtsCI GGATG 6 cut(s) 121, 366, 1257, 1372, 1682, 1947
BtsI GCAGTG 1 cut(s) 2076
BtsIMutI CAGTG 2 cut(s) 609, 2076
Cfr13I GGNCC 5 cut(s) 416, 671, 2041, 2042, 2128
Csp6I GTAC 6 cut(s) 7, 1228, 1469, 1580, 1685, 1868
CviQI GTAC 6 cut(s) 7, 1228, 1469, 1580, 1685, 1868
DpnI GATC 8 cut(s) 333, 1224, 1548, 1560, 1736, 1776, 1820, 1980
DpnII GATC 8 cut(s) 331, 1222, 1546, 1558, 1734, 1774, 1818, 1978
DrdI GACNNNNNNGTC 1 cut(s) 577
DriI GACNNNNNGTC 1 cut(s) 1430
DseDI GACNNNNNNGTC 1 cut(s) 577
EaeI YGGCCR 1 cut(s) 1833
Eam1104I CTCTTC 2 cut(s) 1923, 2052
Eam1105I GACNNNNNGTC 1 cut(s) 1430
EarI CTCTTC 2 cut(s) 1923, 2052
Ecl136II GAGCTC 1 cut(s) 201
Eco130I CCWWGG 3 cut(s) 464, 1672, 1830
Eco24I GRGCYC 2 cut(s) 203, 2045
Eco47I GGWCC 1 cut(s) 2128
Eco53kI GAGCTC 1 cut(s) 201
Eco57I CTGAAG 1 cut(s) 1835
Eco72I CACGTG 1 cut(s) 776
EcoICRI GAGCTC 1 cut(s) 201
EcoO109I RGGNCCY 3 cut(s) 2041, 2042, 2128
EcoRII CCWGG 3 cut(s) 306, 1420, 1495
EcoT14I CCWWGG 3 cut(s) 464, 1672, 1830
EcoT22I ATGCAT 2 cut(s) 366, 1700
EcoT38I GRGCYC 2 cut(s) 203, 2045
ErhI CCWWGG 3 cut(s) 464, 1672, 1830
Esp3I CGTCTC 1 cut(s) 249
FaqI GGGAC 7 cut(s) 403, 469, 971, 1279, 1471, 1510, 2141
FauI CCCGC 1 cut(s) 532
FauNDI CATATG 2 cut(s) 645, 1120
FbaI TGATCA 3 cut(s) 1546, 1734, 1978
Fnu4HI GCNGC 6 cut(s) 320, 599, 843, 1635, 1638, 2055
FokI GGATG 6 cut(s) 108, 373, 1264, 1379, 1689, 1934
FriOI GRGCYC 2 cut(s) 203, 2045
Fsp4HI GCNGC 6 cut(s) 320, 599, 843, 1635, 1638, 2055
FspBI CTAG 9 cut(s) 84, 459, 675, 729, 735, 789, 900, 915, 1269
GluI GCNGC 6 cut(s) 320, 599, 843, 1635, 1638, 2055
GsuI CTGGAG 1 cut(s) 1084
HaeIII GGCC 5 cut(s) 417, 486, 673, 1835, 2043
HapII CCGG 2 cut(s) 158, 228
HpaII CCGG 2 cut(s) 158, 228
HphI GGTGA 2 cut(s) 172, 1420
Hpy166II GTNNAC 4 cut(s) 295, 859, 953, 1685
Hpy188I TCNGA 8 cut(s) 19, 184, 517, 717, 816, 1114, 1436, 2136
Hpy188III TCNNGA 7 cut(s) 67, 926, 1101, 1544, 1654, 1724, 1749
Hpy8I GTNNAC 4 cut(s) 295, 859, 953, 1685
Hpy99I CGWCG 3 cut(s) 184, 199, 236
HpyAV CCTTC 4 cut(s) 38, 128, 260, 2141
HpyCH4III ACNGT 3 cut(s) 236, 613, 1489
HpyCH4IV ACGT 4 cut(s) 291, 775, 1585, 2010
HpyF10VI GCNNNNNNNGC 4 cut(s) 61, 615, 1596, 1677
HpySE526I ACGT 4 cut(s) 291, 775, 1585, 2010
Ksp22I TGATCA 3 cut(s) 1546, 1734, 1978
Kzo9I GATC 8 cut(s) 331, 1222, 1546, 1558, 1734, 1774, 1818, 1978
LmnI GCTCC 2 cut(s) 1103, 1140
Lsp1109I GCAGC 5 cut(s) 610, 829, 1621, 1624, 2041
LweI GCATC 4 cut(s) 351, 1242, 1621, 1667
MaeI CTAG 9 cut(s) 84, 459, 675, 729, 735, 789, 900, 915, 1269
MaeII ACGT 4 cut(s) 291, 775, 1585, 2010
MaeIII GTNAC 3 cut(s) 791, 1148, 2032
MalI GATC 8 cut(s) 333, 1224, 1548, 1560, 1736, 1776, 1820, 1980
MboI GATC 8 cut(s) 331, 1222, 1546, 1558, 1734, 1774, 1818, 1978
MboII GAAGA 6 cut(s) 386, 1032, 1622, 1828, 1940, 2039
MflI RGATCY 3 cut(s) 1558, 1774, 1818
MhlI GDGCHC 3 cut(s) 203, 955, 2045
MlsI TGGCCA 1 cut(s) 1835
MluCI AATT 8 cut(s) 946, 1342, 1394, 1475, 1743, 1786, 1861, 1955
MluNI TGGCCA 1 cut(s) 1835
MlyI GAGTC 5 cut(s) 146, 305, 426, 587, 1453
MmeI TCCRAC 3 cut(s) 162, 935, 1344
Mox20I TGGCCA 1 cut(s) 1835
Mph1103I ATGCAT 2 cut(s) 366, 1700
MscI TGGCCA 1 cut(s) 1835
MseI TTAA 4 cut(s) 684, 1518, 1554, 1853
Msp20I TGGCCA 1 cut(s) 1835
MspI CCGG 2 cut(s) 158, 228
MspR9I CCNGG 3 cut(s) 308, 1422, 1497
Mva1269I GAATGC 3 cut(s) 475, 1395, 1538
MvaI CCWGG 3 cut(s) 308, 1422, 1497
MvnI CGCG 1 cut(s) 1972
MwoI GCNNNNNNNGC 4 cut(s) 61, 615, 1596, 1677
NcoI CCATGG 2 cut(s) 1672, 1830
NdeI CATATG 2 cut(s) 645, 1120
NdeII GATC 8 cut(s) 331, 1222, 1546, 1558, 1734, 1774, 1818, 1978
NlaIV GGNNCC 5 cut(s) 722, 1142, 1560, 2043, 2129
NmeAIII GCCGAG 2 cut(s) 126, 818
NmuCI GTSAC 2 cut(s) 791, 1148
NsiI ATGCAT 2 cut(s) 366, 1700
NspI RCATGY 1 cut(s) 1709
NspV TTCGAA 1 cut(s) 1317
PctI GAATGC 3 cut(s) 475, 1395, 1538
PflMI CCANNNNNTGG 1 cut(s) 917
PkrI GCNGC 6 cut(s) 321, 600, 844, 1636, 1639, 2056
PleI GAGTC 5 cut(s) 146, 305, 426, 586, 1453
PmaCI CACGTG 1 cut(s) 776
PmlI CACGTG 1 cut(s) 776
PpsI GAGTC 5 cut(s) 146, 305, 426, 586, 1453
Ppu21I YACGTR 3 cut(s) 292, 776, 2011
PpuMI RGGWCCY 1 cut(s) 2128
Psp124BI GAGCTC 1 cut(s) 203
Psp1406I AACGTT 1 cut(s) 1585
Psp5II RGGWCCY 1 cut(s) 2128
Psp6I CCWGG 3 cut(s) 306, 1420, 1495
PspCI CACGTG 1 cut(s) 776
PspGI CCWGG 3 cut(s) 306, 1420, 1495
PspN4I GGNNCC 5 cut(s) 722, 1142, 1560, 2043, 2129
PspOMI GGGCCC 1 cut(s) 2041
PspPI GGNCC 5 cut(s) 416, 671, 2041, 2042, 2128
PspPPI RGGWCCY 1 cut(s) 2128
PsuI RGATCY 3 cut(s) 1558, 1774, 1818
RsaI GTAC 6 cut(s) 8, 1229, 1470, 1581, 1686, 1869
RsaNI GTAC 6 cut(s) 7, 1228, 1469, 1580, 1685, 1868
SacI GAGCTC 1 cut(s) 203
SaqAI TTAA 4 cut(s) 684, 1518, 1554, 1853
SatI GCNGC 6 cut(s) 320, 599, 843, 1635, 1638, 2055
Sau3AI GATC 8 cut(s) 331, 1222, 1546, 1558, 1734, 1774, 1818, 1978
Sau96I GGNCC 5 cut(s) 416, 671, 2041, 2042, 2128
SchI GAGTC 5 cut(s) 146, 305, 426, 587, 1453
ScrFI CCNGG 3 cut(s) 308, 1422, 1497
SduI GDGCHC 3 cut(s) 203, 955, 2045
SfaNI GCATC 4 cut(s) 351, 1242, 1621, 1667
SfcI CTRYAG 1 cut(s) 355
SfuI TTCGAA 1 cut(s) 1317
SinI GGWCC 1 cut(s) 2128
SmlI CTYRAG 2 cut(s) 1916, 2122
SmoI CTYRAG 2 cut(s) 1916, 2122
SpeI ACTAGT 2 cut(s) 458, 914
Sse9I AATT 8 cut(s) 946, 1342, 1394, 1475, 1743, 1786, 1861, 1955
SsiI CCGC 5 cut(s) 128, 320, 539, 1536, 1970
SspI AATATT 1 cut(s) 1290
SspMI CTAG 9 cut(s) 84, 459, 675, 729, 735, 789, 900, 915, 1269
SstI GAGCTC 1 cut(s) 203
StyD4I CCNGG 3 cut(s) 306, 1420, 1495
StyI CCWWGG 3 cut(s) 464, 1672, 1830
TaaI ACNGT 3 cut(s) 236, 613, 1489
TaiI ACGT 4 cut(s) 294, 778, 1588, 2013
TaqI TCGA 5 cut(s) 197, 1317, 1653, 1723, 2064
TasI AATT 8 cut(s) 946, 1342, 1394, 1475, 1743, 1786, 1861, 1955
TatI WGTACW 3 cut(s) 6, 1579, 1684
TauI GCSGC 1 cut(s) 322
Tru1I TTAA 4 cut(s) 684, 1518, 1554, 1853
Tru9I TTAA 4 cut(s) 684, 1518, 1554, 1853
TscAI CASTG 2 cut(s) 616, 2076
TseFI GTSAC 2 cut(s) 791, 1148
TseI GCWGC 5 cut(s) 598, 842, 1634, 1637, 2054
Tsp45I GTSAC 2 cut(s) 791, 1148
TspDTI ATGAA 8 cut(s) 110, 959, 1107, 1149, 1176, 1201, 1392, 2039
TspGWI ACGGA 4 cut(s) 183, 231, 237, 810
TspRI CASTG 2 cut(s) 616, 2076
Van91I CCANNNNNTGG 1 cut(s) 917
VneI GTGCAC 1 cut(s) 951
VpaK11BI GGWCC 1 cut(s) 2128
XapI RAATTY 2 cut(s) 1743, 1861
XceI RCATGY 1 cut(s) 1709
XspI CTAG 9 cut(s) 84, 459, 675, 729, 735, 789, 900, 915, 1269
Zsp2I ATGCAT 2 cut(s) 366, 1700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.