pycom15g32920

pumilio homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0012349
Physical Location & Seq
Forward (+)
32227701 .. 32232194
4494 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g32920.4

Sequence Viewer

Length: 2157 bp
ATGATGTTCAAACTATCTGAGGAAGACAAGAAGGTTTTACAGAGGGAAGGAGGAGAGCTGGAAAAGCTCTGGAATGAGAATCCCACCAGGAATCAGCATTATTCCAGTCTTTTCCACCTCCTTCATCCCCCGCATCACCGCCACCTTCTCGGCGGCTCTCCGGTGAGCAGAGCCTCTCTCCCGTCGGAGTTCTTTCCGTCGAGCTCTGTCTCAAGTGGGTTATATTCCTCCGAGGACGGTTCTCCGTCTCCGTATTCAACCCCATTTGAAGAGGCAAAGTATCAAACACCTTACGTGAATGGGTTGTGGCTGGACTCTAAGCCGCCGCCGGATGATCTGGGTTTGCCTGAGAGTTTCTATAGGATGCATATTGGGGAGGAACAGGCGGGTGGGACTAAAAGGATGGGATTTGAGAGAGGCCCGGATGGGATTGGACTCGGTGGTGGGTTTTTTGGGGGGATTAGTCCTTGGAATGCTGAAAATCATGGCCTATTTGAGAGTTCTAAGAACAATGTTTCGGGTTTTGATGGTTTTCAATCTGCGGGATTCGGCTGTGGAGGGAGATGTGATGGGAGTATGGAGTCAGCATTGCTTGGATTGCAACCGAAATGCGCTGTTGGCGATTCAATGGGGTCTTTTTGTAATCGTATGTACCCGAATGCATTGTATGGGCCTAGTGGTGTTAAAAGAATGGAACAGGGATATGCCTGGTATCAGAGGAACCCATCTAGTGCTATGTCTCACCCTGATGAGGATTATTTTAGCTTACTACATGCAACGGGTTCTAATGGCGGAAAGAGTCTTAAGCATCCGATGAGTTCCCCTCAGTTTCCCTCGGTTGAACAGTTGAATGTGGACAATCTTTCGCATAACCATTCAATGATAAATCAATGGACTAGAGTGAATCCAACTAATGGGGTTCCCGAATCTTTCAAGTCCATGAATTGTGCAGGGGAACTTGAGGGTTACGGTTGCAAGGATAGTATGATCATGCAAGGAAAACAGTTGAATCATGCCATCAATAAAGGTAGCAAGTCTTCGAAGGGATACAAGAACTCTTACACTAAGATGGCAATGCAGACAGGAGAGAAAAGCTCTAGACTTGATCCCGATTCATATGATGGCAGAATGAGTGGAAATGAATGGAGACAGAGTGACAATAGCTTGTTTCGGTCAGTACTAAGTTTAAGCTCATTGACCGAGGTCCAGGGATATATATATTTCATTGCAAAGGATCAGTACGGCTGTCGGTTCTTACAAAGGATGCTTGATGAGGGGACCAGCCAAGATTTGCAATTAATATTTGACAAAATAATCAACCATGTTTTCGAACTTATGACGAACCCGTTTGGCAATTACCTAATGCAAAAGTTGTTGGATATGTGCAATGAACAACAAAGAATGCAATTTGTAATCATGGTGACAAAAGAACCAGGACAGCTTGTCAGAGTTTCCTTAGACACACATGGGACTCGCGTGGTACAGAAGTTGATTGAGACTGTGAAAATTGGGAAACAGATTGTTTTAGTTAAATCGTCCCTTGAATGCGGTTTTCTTGATCTTATTAAGGATCCAAATGGTAATCATGTGGTACAACGTTGCCTGGACTGCTTTAGCAATGAAGACAATAAGTTTATTTTTGATGCTGCTGCAAGATTTTGTGTCGAGATTGCAACTCAACGACATGGATGCTGTGTACTACAAAAATGCATTGCACACGCCATTGGGAGACATCGAGATAAGCTGATCAATGAAATTTCAAGAAATGGGCTTCTCCTTTCACAAGATCCTTATGGGAATTATGTTGTTCAATATATCATAGAGCTGAAGATCCCATCTGCAGTGGCCAAACTGACTAATCAGTTAAAAGGAAATTTCGTACGCCTCTCCATGCAGAAGTGCAGTAGTCATGTTGTTGAAAAGTGCCTCAAGTATTTTGAAGAGAGCCGGCCAAAAATCATCCATGAATTGCTCTCAGTTCCACGTTTTGATCAGTTGTTGCAAGACCCTTATGCCAACTATGTCATTCAATCTGCTCTTGGAGTTACCAAGGGCCCTCTTCATGCTGCTCTGGTCGAAGCAGTTAAGCCTCATACAATCTTACGCACCAGTCCGTACTGCAAGAGGATTTTCTCAAAGGACCTGAAGAAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PUF

Protein Analysis

719

Amino Acids

80.33

Weight (kDa)

8.27

Isoelectric Point (pI)

43.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22240 AT1G78160 AT1G78160
fragaria_vesca FvH4_5g37620
malus_domestica MD08G1181900.v1.1 MD15G1367200.v1.1
prunus_persica Prupe.1G515100_v2.0.a1
pyrus_communis pycom08g15510 pycom15g32920
rosa_chinensis RchiOBHm_Chr7g0239301
rosa_laevigata RLG00000000765
rosa_multiflora Rmu_sc0007840.1_g000004
rosa_roxburghii Rroxscaffold_3G00221040
rosa_rugosa Rorug07G0327100
rosa_samantha Rh7AG480500 Rh7BG453200 Rh7CG498400 Rh7DG466500
rosa_wichuraiana Rw7G040250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 914
AccII CGCG 1 cut(s) 1476
AciI CCGC 9 cut(s) 131, 139, 153, 323, 326, 386, 542, 792, 1548
AclI AACGTT 1 cut(s) 1597
AclWI GGATC 6 cut(s) 1100, 1242, 1565, 1578, 1781, 1825
AcoI YGGCCR 2 cut(s) 1845, 1949
AcsI RAATTY 2 cut(s) 1755, 1873
AcuI CTGAAG 1 cut(s) 1847
AfaI GTAC 8 cut(s) 653, 1179, 1241, 1482, 1593, 1698, 1881, 2117
AfiI CCNNNNNNNGG 2 cut(s) 751, 914
AflII CTTAAG 1 cut(s) 803
AhdI GACNNNNNGTC 1 cut(s) 1442
AjnI CCWGG 5 cut(s) 86, 707, 1206, 1432, 1602
Alw21I GWGCWC 1 cut(s) 206
Alw26I GTCTC 6 cut(s) 214, 252, 744, 1141, 1490, 1723
AlwI GGATC 6 cut(s) 1100, 1242, 1565, 1578, 1781, 1825
AoxI GGCC 6 cut(s) 418, 487, 671, 1845, 1949, 2053
ApaI GGGCCC 1 cut(s) 2057
ApeKI GCWGC 3 cut(s) 1646, 1649, 2066
ApoI RAATTY 2 cut(s) 1755, 1873
AseI ATTAAT 1 cut(s) 1298
AspLEI GCGC 1 cut(s) 614
AspS9I GGNCC 7 cut(s) 419, 671, 1204, 1278, 2053, 2054, 2140
AsuC2I CCSGG 1 cut(s) 422
AsuHPI GGTGA 4 cut(s) 128, 175, 734, 1432
AsuII TTCGAA 2 cut(s) 1040, 1329
AvaII GGWCC 3 cut(s) 1204, 1278, 2140
BaeGI GKGCMC 1 cut(s) 2057
BaeI ACNNNNGTAYC 2 cut(s) 1472, 1505
BalI TGGCCA 1 cut(s) 1847
BamHI GGATCC 1 cut(s) 1570
BanII GRGCYC 2 cut(s) 206, 2057
BarI GAAGNNNNNNTAC 2 cut(s) 1021, 1053
BbsI GAAGAC 3 cut(s) 30, 1029, 1629
Bbv12I GWGCWC 1 cut(s) 206
BbvI GCAGC 3 cut(s) 1633, 1636, 2053
BccI CCATC 9 cut(s) 397, 419, 521, 563, 733, 1025, 1063, 1115, 1843
BceAI ACGGC 1 cut(s) 1258
BcgI CGANNNNNNTGC 2 cut(s) 1671, 1705
BciT130I CCWGG 5 cut(s) 88, 709, 1208, 1434, 1604
BciVI GTATCC 1 cut(s) 1040
BclI TGATCA 3 cut(s) 987, 1746, 1990
BcnI CCSGG 1 cut(s) 422
BcoDI GTCTC 6 cut(s) 214, 252, 744, 1141, 1490, 1723
BfaI CTAG 4 cut(s) 675, 729, 897, 1098
BfmI CTRYAG 2 cut(s) 358, 1839
BfrI CTTAAG 1 cut(s) 803
BfuI GTATCC 1 cut(s) 1040
BisI GCNGC 6 cut(s) 154, 323, 326, 1647, 1650, 2067
BlsI GCNGC 6 cut(s) 155, 324, 327, 1648, 1651, 2068
BmcAI AGTACT 1 cut(s) 1179
Bme1390I CCNGG 6 cut(s) 88, 422, 709, 1208, 1434, 1604
Bme18I GGWCC 3 cut(s) 1204, 1278, 2140
BmeRI GACNNNNNGTC 1 cut(s) 1442
BmgT120I GGNCC 7 cut(s) 419, 671, 1204, 1278, 2053, 2054, 2140
BmiI GGNNCC 5 cut(s) 722, 921, 1279, 1572, 2055
BmrFI CCNGG 6 cut(s) 88, 422, 709, 1208, 1434, 1604
BmsI GCATC 6 cut(s) 142, 354, 817, 1254, 1633, 1679
BoxI GACNNNNGTC 1 cut(s) 1202
BpiI GAAGAC 3 cut(s) 30, 1029, 1629
BplI GAGNNNNNCTC 6 cut(s) 162, 194, 808, 840, 1079, 1111
Bpu14I TTCGAA 2 cut(s) 1040, 1329
BpuEI CTTGAG 3 cut(s) 196, 980, 1913
BpuMI CCSGG 1 cut(s) 422
BsaAI YACGTR 1 cut(s) 295
BsaJI CCNNGG 6 cut(s) 231, 467, 834, 1200, 1207, 2049
BsaWI WCCGGW 1 cut(s) 160
BsaXI ACNNNNNCTCC 2 cut(s) 1138, 1168
Bsc4I CCNNNNNNNGG 2 cut(s) 751, 914
Bse118I RCCGGY 1 cut(s) 1947
Bse1I ACTGG 2 cut(s) 105, 2109
Bse3DI GCAATG 6 cut(s) 587, 1080, 1224, 1393, 1624, 1710
BseBI CCWGG 5 cut(s) 88, 709, 1208, 1434, 1604
BseDI CCNNGG 6 cut(s) 231, 467, 834, 1200, 1207, 2049
BseGI GGATG 9 cut(s) 124, 337, 369, 408, 430, 808, 1269, 1694, 1959
BseLI CCNNNNNNNGG 2 cut(s) 751, 914
BseMI GCAATG 6 cut(s) 587, 1080, 1224, 1393, 1624, 1710
BseMII CTCAG 4 cut(s) 9, 339, 839, 1989
BseNI ACTGG 2 cut(s) 105, 2109
BseRI GAGGAG 1 cut(s) 66
BseSI GKGCMC 1 cut(s) 2057
BseXI GCAGC 3 cut(s) 1633, 1636, 2053
BsgI GTGCAG 2 cut(s) 969, 1921
Bsh1236I CGCG 1 cut(s) 1476
BshFI GGCC 6 cut(s) 420, 489, 673, 1847, 1951, 2055
BsiHKAI GWGCWC 1 cut(s) 206
BsiSI CCGG 4 cut(s) 161, 329, 422, 1948
BsiWI CGTACG 1 cut(s) 1879
BslFI GGGAC 4 cut(s) 406, 1291, 1483, 1522
BslI CCNNNNNNNGG 2 cut(s) 751, 914
BsmAI GTCTC 6 cut(s) 214, 252, 744, 1141, 1490, 1723
BsmBI CGTCTC 1 cut(s) 252
BsmFI GGGAC 4 cut(s) 406, 1291, 1483, 1522
BsmI GAATGC 4 cut(s) 478, 664, 1407, 1550
BsnI GGCC 6 cut(s) 420, 489, 673, 1847, 1951, 2055
Bsp119I TTCGAA 2 cut(s) 1040, 1329
Bsp120I GGGCCC 1 cut(s) 2053
Bsp1286I GDGCHC 2 cut(s) 206, 2057
BspACI CCGC 9 cut(s) 131, 139, 153, 323, 326, 386, 542, 792, 1548
BspANI GGCC 6 cut(s) 420, 489, 673, 1847, 1951, 2055
BspCNI CTCAG 4 cut(s) 10, 340, 838, 1988
BspFNI CGCG 1 cut(s) 1476
BspLI GGNNCC 5 cut(s) 722, 921, 1279, 1572, 2055
BspMAI CTGCAG 1 cut(s) 1843
BspPI GGATC 6 cut(s) 1100, 1242, 1565, 1578, 1781, 1825
BspT104I TTCGAA 2 cut(s) 1040, 1329
BspTI CTTAAG 1 cut(s) 803
BsrDI GCAATG 6 cut(s) 587, 1080, 1224, 1393, 1624, 1710
BsrFI RCCGGY 1 cut(s) 1947
BsrI ACTGG 2 cut(s) 105, 2109
BssAI RCCGGY 1 cut(s) 1947
BssECI CCNNGG 6 cut(s) 231, 467, 834, 1200, 1207, 2049
BssT1I CCWWGG 2 cut(s) 467, 2049
Bst2UI CCWGG 5 cut(s) 88, 709, 1208, 1434, 1604
Bst4CI ACNGT 5 cut(s) 239, 846, 971, 1005, 1501
Bst6I CTCTTC 3 cut(s) 264, 1935, 2064
BstAFI CTTAAG 1 cut(s) 803
BstBAI YACGTR 1 cut(s) 295
BstBI TTCGAA 2 cut(s) 1040, 1329
BstC8I GCNNGC 1 cut(s) 1949
BstDEI CTNAG 9 cut(s) 18, 318, 348, 504, 825, 1065, 1181, 1456, 1975
BstF5I GGATG 9 cut(s) 124, 337, 369, 408, 430, 808, 1269, 1694, 1959
BstFNI CGCG 1 cut(s) 1476
BstHHI GCGC 1 cut(s) 614
BstMAI GTCTC 6 cut(s) 214, 252, 744, 1141, 1490, 1723
BstMWI GCNNNNNNNGC 4 cut(s) 64, 598, 618, 1608
BstNI CCWGG 5 cut(s) 88, 709, 1208, 1434, 1604
BstNSI RCATGY 1 cut(s) 776
BstPAI GACNNNNGTC 1 cut(s) 1202
BstSCI CCNGG 6 cut(s) 86, 420, 707, 1206, 1432, 1602
BstSFI CTRYAG 2 cut(s) 358, 1839
BstSLI GKGCMC 1 cut(s) 2057
BstUI CGCG 1 cut(s) 1476
BstV1I GCAGC 3 cut(s) 1633, 1636, 2053
BstV2I GAAGAC 3 cut(s) 30, 1029, 1629
BstX2I RGATCY 3 cut(s) 1570, 1786, 1830
BstYI RGATCY 3 cut(s) 1570, 1786, 1830
BsuI GTATCC 1 cut(s) 1040
BsuRI GGCC 6 cut(s) 420, 489, 673, 1847, 1951, 2055
BtsCI GGATG 9 cut(s) 124, 337, 369, 408, 430, 808, 1269, 1694, 1959
BtsI GCAGTG 1 cut(s) 1848
BtsIMutI CAGTG 1 cut(s) 1848
Cac8I GCNNGC 1 cut(s) 1949
CfoI GCGC 1 cut(s) 614
Cfr10I RCCGGY 1 cut(s) 1947
Cfr13I GGNCC 7 cut(s) 419, 671, 1204, 1278, 2053, 2054, 2140
Csp6I GTAC 8 cut(s) 652, 1178, 1240, 1481, 1592, 1697, 1880, 2116
CviQI GTAC 8 cut(s) 652, 1178, 1240, 1481, 1592, 1697, 1880, 2116
DdeI CTNAG 9 cut(s) 18, 318, 348, 504, 825, 1065, 1181, 1456, 1975
DriI GACNNNNNGTC 1 cut(s) 1442
EaeI YGGCCR 2 cut(s) 1845, 1949
Eam1104I CTCTTC 3 cut(s) 264, 1935, 2064
Eam1105I GACNNNNNGTC 1 cut(s) 1442
EarI CTCTTC 3 cut(s) 264, 1935, 2064
EciI GGCGGA 1 cut(s) 807
Ecl136II GAGCTC 1 cut(s) 204
Eco130I CCWWGG 2 cut(s) 467, 2049
Eco24I GRGCYC 2 cut(s) 206, 2057
Eco47I GGWCC 3 cut(s) 1204, 1278, 2140
Eco53kI GAGCTC 1 cut(s) 204
Eco57I CTGAAG 1 cut(s) 1847
EcoICRI GAGCTC 1 cut(s) 204
EcoO109I RGGNCCY 3 cut(s) 2053, 2054, 2140
EcoRII CCWGG 5 cut(s) 86, 707, 1206, 1432, 1602
EcoT14I CCWWGG 2 cut(s) 467, 2049
EcoT22I ATGCAT 3 cut(s) 369, 664, 1712
EcoT38I GRGCYC 2 cut(s) 206, 2057
ErhI CCWWGG 2 cut(s) 467, 2049
Esp3I CGTCTC 1 cut(s) 252
FaqI GGGAC 4 cut(s) 406, 1291, 1483, 1522
FauI CCCGC 3 cut(s) 138, 379, 535
FauNDI CATATG 1 cut(s) 1117
FbaI TGATCA 3 cut(s) 987, 1746, 1990
Fnu4HI GCNGC 6 cut(s) 154, 323, 326, 1647, 1650, 2067
FokI GGATG 9 cut(s) 111, 344, 376, 415, 437, 795, 1276, 1701, 1946
FriOI GRGCYC 2 cut(s) 206, 2057
Fsp4HI GCNGC 6 cut(s) 154, 323, 326, 1647, 1650, 2067
FspBI CTAG 4 cut(s) 675, 729, 897, 1098
GlaI GCGC 1 cut(s) 613
GluI GCNGC 6 cut(s) 154, 323, 326, 1647, 1650, 2067
HaeIII GGCC 6 cut(s) 420, 489, 673, 1847, 1951, 2055
HapII CCGG 4 cut(s) 161, 329, 422, 1948
HhaI GCGC 1 cut(s) 614
Hin6I GCGC 1 cut(s) 612
HinP1I GCGC 1 cut(s) 612
HpaII CCGG 4 cut(s) 161, 329, 422, 1948
HphI GGTGA 4 cut(s) 128, 175, 734, 1432
Hpy166II GTNNAC 2 cut(s) 856, 1697
Hpy188I TCNGA 6 cut(s) 19, 187, 232, 717, 813, 1448
Hpy188III TCNNGA 8 cut(s) 70, 923, 1098, 1109, 1556, 1666, 1736, 1761
Hpy8I GTNNAC 2 cut(s) 856, 1697
Hpy99I CGWCG 2 cut(s) 187, 202
HpyAV CCTTC 5 cut(s) 25, 41, 131, 155, 1036
HpyCH4III ACNGT 5 cut(s) 239, 846, 971, 1005, 1501
HpyCH4IV ACGT 3 cut(s) 294, 1597, 1984
HpyF10VI GCNNNNNNNGC 4 cut(s) 64, 598, 618, 1608
HpyF3I CTNAG 9 cut(s) 18, 318, 348, 504, 825, 1065, 1181, 1456, 1975
HpySE526I ACGT 3 cut(s) 294, 1597, 1984
HspAI GCGC 1 cut(s) 612
KroI GCCGGC 1 cut(s) 1947
KroNI GCCGGC 1 cut(s) 1949
Ksp22I TGATCA 3 cut(s) 987, 1746, 1990
Lsp1109I GCAGC 3 cut(s) 1633, 1636, 2053
LweI GCATC 6 cut(s) 142, 354, 817, 1254, 1633, 1679
MaeI CTAG 4 cut(s) 675, 729, 897, 1098
MaeII ACGT 3 cut(s) 294, 1597, 1984
MaeIII GTNAC 4 cut(s) 965, 1154, 1420, 2044
MboII GAAGA 7 cut(s) 35, 281, 1029, 1634, 1840, 1952, 2051
MflI RGATCY 3 cut(s) 1570, 1786, 1830
MhlI GDGCHC 2 cut(s) 206, 2057
MlsI TGGCCA 1 cut(s) 1847
MluCI AATT 9 cut(s) 943, 1295, 1354, 1406, 1506, 1755, 1798, 1873, 1967
MluNI TGGCCA 1 cut(s) 1847
MlyI GAGTC 5 cut(s) 308, 429, 590, 808, 1465
MmeI TCCRAC 3 cut(s) 165, 932, 1356
Mox20I TGGCCA 1 cut(s) 1847
Mph1103I ATGCAT 3 cut(s) 369, 664, 1712
MroNI GCCGGC 1 cut(s) 1947
MscI TGGCCA 1 cut(s) 1847
MseI TTAA 8 cut(s) 684, 804, 1187, 1298, 1530, 1566, 1865, 2085
MslI CAYNNNNRTG 2 cut(s) 747, 1067
Msp20I TGGCCA 1 cut(s) 1847
MspCI CTTAAG 1 cut(s) 803
MspI CCGG 4 cut(s) 161, 329, 422, 1948
MspR9I CCNGG 6 cut(s) 88, 422, 709, 1208, 1434, 1604
Mva1269I GAATGC 4 cut(s) 478, 664, 1407, 1550
MvaI CCWGG 5 cut(s) 88, 709, 1208, 1434, 1604
MvnI CGCG 1 cut(s) 1476
MwoI GCNNNNNNNGC 4 cut(s) 64, 598, 618, 1608
NaeI GCCGGC 1 cut(s) 1949
NciI CCSGG 1 cut(s) 422
NdeI CATATG 1 cut(s) 1117
NgoMIV GCCGGC 1 cut(s) 1947
NlaIV GGNNCC 5 cut(s) 722, 921, 1279, 1572, 2055
NmeAIII GCCGAG 1 cut(s) 129
NmuCI GTSAC 2 cut(s) 1154, 1420
NsiI ATGCAT 3 cut(s) 369, 664, 1712
NspI RCATGY 1 cut(s) 776
NspV TTCGAA 2 cut(s) 1040, 1329
PctI GAATGC 4 cut(s) 478, 664, 1407, 1550
PdiI GCCGGC 1 cut(s) 1949
PfeI GAWTC 8 cut(s) 79, 91, 546, 623, 904, 926, 1009, 1112
Pfl23II CGTACG 1 cut(s) 1879
PflMI CCANNNNNTGG 1 cut(s) 914
PkrI GCNGC 6 cut(s) 155, 324, 327, 1648, 1651, 2068
PleI GAGTC 5 cut(s) 308, 429, 589, 807, 1465
PpsI GAGTC 5 cut(s) 308, 429, 589, 807, 1465
Ppu21I YACGTR 1 cut(s) 295
PpuMI RGGWCCY 1 cut(s) 2140
PshAI GACNNNNGTC 1 cut(s) 1202
PshBI ATTAAT 1 cut(s) 1298
Psp124BI GAGCTC 1 cut(s) 206
Psp1406I AACGTT 1 cut(s) 1597
Psp5II RGGWCCY 1 cut(s) 2140
Psp6I CCWGG 5 cut(s) 86, 707, 1206, 1432, 1602
PspGI CCWGG 5 cut(s) 86, 707, 1206, 1432, 1602
PspLI CGTACG 1 cut(s) 1879
PspN4I GGNNCC 5 cut(s) 722, 921, 1279, 1572, 2055
PspOMI GGGCCC 1 cut(s) 2053
PspPI GGNCC 7 cut(s) 419, 671, 1204, 1278, 2053, 2054, 2140
PspPPI RGGWCCY 1 cut(s) 2140
PstI CTGCAG 1 cut(s) 1843
PsuI RGATCY 3 cut(s) 1570, 1786, 1830
RsaI GTAC 8 cut(s) 653, 1179, 1241, 1482, 1593, 1698, 1881, 2117
RsaNI GTAC 8 cut(s) 652, 1178, 1240, 1481, 1592, 1697, 1880, 2116
RseI CAYNNNNRTG 2 cut(s) 747, 1067
SacI GAGCTC 1 cut(s) 206
SaqAI TTAA 8 cut(s) 684, 804, 1187, 1298, 1530, 1566, 1865, 2085
SatI GCNGC 6 cut(s) 154, 323, 326, 1647, 1650, 2067
Sau96I GGNCC 7 cut(s) 419, 671, 1204, 1278, 2053, 2054, 2140
ScaI AGTACT 1 cut(s) 1179
SchI GAGTC 5 cut(s) 308, 429, 590, 808, 1465
ScrFI CCNGG 6 cut(s) 88, 422, 709, 1208, 1434, 1604
SduI GDGCHC 2 cut(s) 206, 2057
SfaNI GCATC 6 cut(s) 142, 354, 817, 1254, 1633, 1679
SfcI CTRYAG 2 cut(s) 358, 1839
SfuI TTCGAA 2 cut(s) 1040, 1329
SinI GGWCC 3 cut(s) 1204, 1278, 2140
SmiMI CAYNNNNRTG 2 cut(s) 747, 1067
SmlI CTYRAG 4 cut(s) 211, 803, 959, 1928
SmoI CTYRAG 4 cut(s) 211, 803, 959, 1928
Sse9I AATT 9 cut(s) 943, 1295, 1354, 1406, 1506, 1755, 1798, 1873, 1967
SsiI CCGC 9 cut(s) 131, 139, 153, 323, 326, 386, 542, 792, 1548
SspI AATATT 1 cut(s) 1302
SspMI CTAG 4 cut(s) 675, 729, 897, 1098
SstI GAGCTC 1 cut(s) 206
StyD4I CCNGG 6 cut(s) 86, 420, 707, 1206, 1432, 1602
StyI CCWWGG 2 cut(s) 467, 2049
TaaI ACNGT 5 cut(s) 239, 846, 971, 1005, 1501
TaiI ACGT 3 cut(s) 297, 1600, 1987
TaqI TCGA 6 cut(s) 200, 1040, 1329, 1665, 1735, 2076
TaqII GACCGA 2 cut(s) 1161, 1214
TasI AATT 9 cut(s) 943, 1295, 1354, 1406, 1506, 1755, 1798, 1873, 1967
TatI WGTACW 2 cut(s) 1177, 1696
TauI GCSGC 3 cut(s) 156, 325, 328
TfiI GAWTC 8 cut(s) 79, 91, 546, 623, 904, 926, 1009, 1112
Tru1I TTAA 8 cut(s) 684, 804, 1187, 1298, 1530, 1566, 1865, 2085
Tru9I TTAA 8 cut(s) 684, 804, 1187, 1298, 1530, 1566, 1865, 2085
TscAI CASTG 1 cut(s) 1848
TseFI GTSAC 2 cut(s) 1154, 1420
TseI GCWGC 3 cut(s) 1646, 1649, 2066
Tsp45I GTSAC 2 cut(s) 1154, 1420
TspGWI ACGGA 4 cut(s) 186, 234, 240, 2103
TspRI CASTG 1 cut(s) 1848
Van91I CCANNNNNTGG 1 cut(s) 914
Vha464I CTTAAG 1 cut(s) 803
VpaK11BI GGWCC 3 cut(s) 1204, 1278, 2140
VspI ATTAAT 1 cut(s) 1298
XapI RAATTY 2 cut(s) 1755, 1873
XbaI TCTAGA 1 cut(s) 1097
XceI RCATGY 1 cut(s) 776
XspI CTAG 4 cut(s) 675, 729, 897, 1098
ZrmI AGTACT 1 cut(s) 1179
Zsp2I ATGCAT 3 cut(s) 369, 664, 1712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.