RLG00000000765

pumilio homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0012349
Physical Location & Seq
Forward (+)
5093215 .. 5097303
4089 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000765

Sequence Viewer

Length: 2229 bp
ATGTTGAGAATAGCTGAGCAAGACCAGAGGGTTTTGATGAACATGAAGAATGATAAAAATAACAACAACAACCCGAGAATCCCTCCACCTTATTGTGATTCCAATCTTTTTCAGCTTCTGCTTCAGTCTAACCATCACCATGTGAGTGGTTCACCTATTAGCAGAGCTTCTCTGCAATCTGAGTTTTCTCCTTCGAGTTCCTTCTCAAATGGGTTTTATTCCTCTGAGGATAGCTCTCCTTATTCTCCAACCCCATTTGAGGAGGCAAAGTATCAAACACCTCTTAAGCATTACATGAATGGAGGAGGGTTGTGGTTGGACTCCAAGGCAGCACCACCACAACATGAGTCTCATTTCAATGAGATTTTGGGGGATGATCTGGGGTTGGCTGAGAGTTTTTACAGGATGAATATTGGGGATGGACATGAGGGTGGTGGTAAAAGGAGGGGGTTTGAGAGAGACCCAGATGGGTTTGGGCTTGGTGGTGGTTTCTTAGGGGGTAATATTCCTTGGAATGTTGAGAACTATGGTTTGTTTGAAACTTCTAGGAACAATATGTCTGATGTTGAAGCTTTTCAGTCCTCTCATTTTGGTGTTAGAGGTGGTTTTAATGGTTATGTGGAGCCTGAGTTTCTTGGATTGGGGCCAGAATATGTTGGTGGTGATTCAATGGGGGCTATTCTAAATCATGTGCAGCAGCCTAGTGCTTTGTGTTGTGGTCCTAGTGGTGTTAAGAACCAAATGGGTTACATGGTAGAGCAAAGAAAGGAACTGAGAGATGATTGGTATTACAGAAATGTTCAAGTAGAGAACCCATATGTTGCCAGGCCTTACCTTGATGATGAATTTGTTTATTCACAGCTATTTGGAACAGATTCTAGTGCTGGAAAGGGTCTTATGTATCCGATGAACTCCCCTCAGTTCCCCTCAGTTGCTCAGCTGTGTGTGGACAATGGTTCACATAATCATCCACTGATAAGACAAAGGACTAGAGGAAATCCAACTAGGAAATGTGCAGGGCACGTAGAGGGTTTTAGAGGTGAGGATAGTCTTGCTGTACAAGGAAAACATTTGAATCATGGTGTCACTAAGGTTTCCAAGTCTTCAAAGGCTAACAAGAAGAATTCTTGCACTAAGATGCCAATGAGGACAGAAGGAGAGAAAAGCTCTAGAATAGATTTGGATTCATATAATGGTGGAAGTAGTGGAAATGAATGTAGTCAGAGCAGTAATGACTCAATGAAGTCACTGCTTACTTTGGGTTCATTGTCTGAGGTCCAGGGATACATATACTTCCTAGCAAAGGATCAGCATGGTTGCCGGTTCTTACAGAGAATGCTCGATGAGGGAACCCGTCAAGATGTGCAACTAATATTTGATAGGATAATCAATCATGTTCTTGAACTTATGACAGACCCGTTTGGCAATTACCTAATGCAGAAGTTCTTGGACATGTGTAATGAACAGCAAAGAATGCAGTTTGTACTTAAGGTGACCAAAGAACCGGGACAGCTTGCGAGAGTTTCCTTGGACACACATGGCACTCGGGTGGTGCAGAAGTTGATCGAGACTGTGGAAAATGGGAAACAGGTCTCTTTGATCATATCATCCCTTGAATGTGGTTTTCTTGATCTTATTAAGGATCCAAATGGCAATCATGTGGTACAGCGGTGCTTGGACTGCTTCAGCACTGAAGAGAACAGGTTCATATTTGATGCTGCTGCAAGATTCTGTGTTGAGATTGCAACTCAGCGTCATGGATGCTGTGTGCTACAAAAATGCATTGCACATGCCAGTGGGAGACATCGAGATAAGCTGGTCACTGAAGTTTCTAGGAATGGGCTTCTCCTTTCCCAAGATCCGTATGGAAACTATGTTGTTCAGTATGTCATAGAGCTGAAAATCCCATCAGTCATGGCCAGATTGATCTCTCAGTTGAAGGGACACTTTGTACTCCTCTCCATGCAGAAATGCAGTAGTCATGTTGTTGAAAAATGCCTCAAGCACTATGAAGAGAGCCGAGCAAAAGTCATCCAGGAATTGCTCTCAGTTTCTCACTTTGAACAACTGTTGCAAGACCCTTATGCTAACTATGTCATTCAATCTGCTCTTTCAGTTACCAAGGGCCCTCTTCATGCTGCACTGGTTGAAGCTGTCAAGCCTCATACAATCTTGCGCCACAGCCCATACTGCAAGAGGATTTTCACAAAGGACCTCCTGAAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PUF

Protein Analysis

743

Amino Acids

83.14

Weight (kDa)

6.98

Isoelectric Point (pI)

46.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUF PF00806 430 - 463 4.3e-11 Pumilio-family RNA binding repeat
PUF PF00806 465 - 497 5.8e-09 Pumilio-family RNA binding repeat
PUF PF00806 542 - 572 3.6e-08 Pumilio-family RNA binding repeat
PUF PF00806 578 - 610 7.8e-13 Pumilio-family RNA binding repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22240 AT1G78160 AT1G78160
fragaria_vesca FvH4_5g37620
malus_domestica MD08G1181900.v1.1 MD15G1367200.v1.1
prunus_persica Prupe.1G515100_v2.0.a1
pyrus_communis pycom08g15510 pycom15g32920
rosa_chinensis RchiOBHm_Chr7g0239301
rosa_laevigata RLG00000000765
rosa_multiflora Rmu_sc0007840.1_g000004
rosa_roxburghii Rroxscaffold_3G00221040
rosa_rugosa Rorug07G0327100
rosa_samantha Rh7AG480500 Rh7BG453200 Rh7CG498400 Rh7DG466500
rosa_wichuraiana Rw7G040250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 1669
AclWI GGATC 4 cut(s) 1314, 1637, 1650, 1853
AcoI YGGCCR 1 cut(s) 1917
AcsI RAATTY 2 cut(s) 845, 1123
AcuI CTGAAG 4 cut(s) 107, 1669, 1713, 1845
AdeI CACNNNGTG 1 cut(s) 142
AfaI GTAC 4 cut(s) 1059, 1485, 1665, 1953
AfiI CCNNNNNNNGG 2 cut(s) 259, 1303
AflII CTTAAG 2 cut(s) 284, 1487
AflIII ACRYGT 1 cut(s) 1452
AjnI CCWGG 3 cut(s) 824, 1278, 2034
AleI CACNNNNGTG 1 cut(s) 1547
Alw26I GTCTC 5 cut(s) 354, 453, 1562, 1597, 1795
AlwI GGATC 4 cut(s) 1314, 1637, 1650, 1853
AlwNI CAGNNNCTG 1 cut(s) 118
Ama87I CYCGRG 2 cut(s) 73, 1545
AoxI GGCC 4 cut(s) 644, 827, 1917, 2125
ApaI GGGCCC 1 cut(s) 2129
ApeKI GCWGC 6 cut(s) 329, 694, 697, 1718, 1721, 2138
ApoI RAATTY 2 cut(s) 845, 1123
Asp700I GAANNNNTTC 3 cut(s) 573, 874, 1703
AspLEI GCGC 1 cut(s) 2178
AspS9I GGNCC 6 cut(s) 644, 719, 1276, 2125, 2126, 2212
AsuC2I CCSGG 1 cut(s) 1506
AsuHPI GGTGA 5 cut(s) 128, 144, 674, 1052, 1504
AvaI CYCGRG 2 cut(s) 73, 1545
AvaII GGWCC 3 cut(s) 719, 1276, 2212
BaeGI GKGCMC 2 cut(s) 1023, 2129
BaeI ACNNNNGTAYC 2 cut(s) 1655, 1688
BalI TGGCCA 1 cut(s) 1919
BamHI GGATCC 1 cut(s) 1642
BanII GRGCYC 1 cut(s) 2129
BbsI GAAGAC 1 cut(s) 1095
BbvI GCAGC 6 cut(s) 341, 706, 709, 1705, 1708, 2125
BccI CCATC 4 cut(s) 141, 413, 461, 1915
BciT130I CCWGG 3 cut(s) 826, 1280, 2036
BciVI GTATCC 2 cut(s) 912, 1277
BclI TGATCA 1 cut(s) 1599
BcnI CCSGG 1 cut(s) 1506
BcoDI GTCTC 5 cut(s) 354, 453, 1562, 1597, 1795
BfaI CTAG 9 cut(s) 546, 702, 723, 879, 990, 1005, 1170, 1298, 1833
BfrI CTTAAG 2 cut(s) 284, 1487
BfuI GTATCC 2 cut(s) 912, 1277
BisI GCNGC 6 cut(s) 330, 695, 698, 1719, 1722, 2139
BlpI GCTNAGC 2 cut(s) 15, 936
BlsI GCNGC 6 cut(s) 331, 696, 699, 1720, 1723, 2140
Bme1390I CCNGG 4 cut(s) 826, 1280, 1506, 2036
Bme18I GGWCC 3 cut(s) 719, 1276, 2212
BmeT110I CYCGRG 2 cut(s) 73, 1545
BmgT120I GGNCC 6 cut(s) 644, 719, 1276, 2125, 2126, 2212
BmiI GGNNCC 5 cut(s) 624, 645, 1351, 1644, 2127
BmrFI CCNGG 4 cut(s) 826, 1280, 1506, 2036
BmsI GCATC 3 cut(s) 1128, 1705, 1751
BpiI GAAGAC 1 cut(s) 1095
BplI GAGNNNNNCTC 6 cut(s) 67, 99, 218, 250, 1151, 1183
Bpu1102I GCTNAGC 2 cut(s) 15, 936
BpuEI CTTGAG 1 cut(s) 1985
BpuMI CCSGG 1 cut(s) 1506
BsaAI YACGTR 1 cut(s) 1024
BsaBI GATNNNNATC 1 cut(s) 102
BsaI GGTCTC 2 cut(s) 453, 1597
BsaJI CCNNGG 5 cut(s) 324, 509, 1279, 1527, 2121
BsaXI ACNNNNNCTCC 4 cut(s) 254, 284, 614, 644
Bsc4I CCNNNNNNNGG 2 cut(s) 259, 1303
Bse118I RCCGGY 1 cut(s) 1320
Bse1I ACTGG 2 cut(s) 1794, 2148
Bse3DI GCAATG 1 cut(s) 1782
Bse8I GATNNNNATC 1 cut(s) 102
BseBI CCWGG 3 cut(s) 826, 1280, 2036
BseDI CCNNGG 5 cut(s) 324, 509, 1279, 1527, 2121
BseGI GGATG 7 cut(s) 379, 411, 424, 967, 1607, 1766, 2031
BseJI GATNNNNATC 1 cut(s) 102
BseLI CCNNNNNNNGG 2 cut(s) 259, 1303
BseMI GCAATG 1 cut(s) 1782
BseNI ACTGG 2 cut(s) 1794, 2148
BseRI GAGGAG 3 cut(s) 275, 318, 1946
BseSI GKGCMC 2 cut(s) 1023, 2129
BseXI GCAGC 6 cut(s) 341, 706, 709, 1705, 1708, 2125
BsgI GTGCAG 4 cut(s) 713, 1035, 1574, 2124
BshFI GGCC 4 cut(s) 646, 829, 1919, 2127
BsiHKCI CYCGRG 2 cut(s) 73, 1545
BsiSI CCGG 2 cut(s) 1321, 1505
BslFI GGGAC 2 cut(s) 1521, 1956
BslI CCNNNNNNNGG 2 cut(s) 259, 1303
BsmAI GTCTC 5 cut(s) 354, 453, 1562, 1597, 1795
BsmFI GGGAC 2 cut(s) 1521, 1956
BsmI GAATGC 2 cut(s) 1341, 1479
BsnI GGCC 4 cut(s) 646, 829, 1919, 2127
Bso31I GGTCTC 2 cut(s) 453, 1597
BsoBI CYCGRG 2 cut(s) 73, 1545
Bsp120I GGGCCC 1 cut(s) 2125
Bsp1286I GDGCHC 2 cut(s) 1023, 2129
Bsp1407I TGTACA 1 cut(s) 1057
Bsp143I GATC 8 cut(s) 376, 1306, 1563, 1599, 1630, 1642, 1858, 1926
Bsp1720I GCTNAGC 2 cut(s) 15, 936
BspACI CCGC 1 cut(s) 1669
BspANI GGCC 4 cut(s) 646, 829, 1919, 2127
BspLI GGNNCC 5 cut(s) 624, 645, 1351, 1644, 2127
BspPI GGATC 4 cut(s) 1314, 1637, 1650, 1853
BspTI CTTAAG 2 cut(s) 284, 1487
BspTNI GGTCTC 2 cut(s) 453, 1597
BsrDI GCAATG 1 cut(s) 1782
BsrFI RCCGGY 1 cut(s) 1320
BsrGI TGTACA 1 cut(s) 1057
BsrI ACTGG 2 cut(s) 1794, 2148
BssAI RCCGGY 1 cut(s) 1320
BssECI CCNNGG 5 cut(s) 324, 509, 1279, 1527, 2121
BssMI GATC 8 cut(s) 376, 1306, 1563, 1599, 1630, 1642, 1858, 1926
BssT1I CCWWGG 4 cut(s) 324, 509, 1527, 2121
Bst2UI CCWGG 3 cut(s) 826, 1280, 2036
Bst4CI ACNGT 2 cut(s) 1573, 2070
Bst6I CTCTTC 3 cut(s) 1689, 2007, 2136
BstAFI CTTAAG 2 cut(s) 284, 1487
BstAPI GCANNNNNTGC 1 cut(s) 1474
BstAUI TGTACA 1 cut(s) 1057
BstBAI YACGTR 1 cut(s) 1024
BstC8I GCNNGC 1 cut(s) 1515
BstEII GGTNACC 1 cut(s) 1492
BstENI CCTNNNNNAGG 1 cut(s) 1301
BstF5I GGATG 7 cut(s) 379, 411, 424, 967, 1607, 1766, 2031
BstHHI GCGC 1 cut(s) 2178
BstKTI GATC 8 cut(s) 379, 1309, 1566, 1602, 1633, 1645, 1861, 1929
BstMAI GTCTC 5 cut(s) 354, 453, 1562, 1597, 1795
BstMBI GATC 8 cut(s) 376, 1306, 1563, 1599, 1630, 1642, 1858, 1926
BstMWI GCNNNNNNNGC 3 cut(s) 1474, 1680, 2190
BstNI CCWGG 3 cut(s) 826, 1280, 2036
BstNSI RCATGY 2 cut(s) 1456, 1793
BstPI GGTNACC 1 cut(s) 1492
BstSCI CCNGG 4 cut(s) 824, 1278, 1504, 2034
BstSLI GKGCMC 2 cut(s) 1023, 2129
BstV1I GCAGC 6 cut(s) 341, 706, 709, 1705, 1708, 2125
BstV2I GAAGAC 1 cut(s) 1095
BstX2I RGATCY 2 cut(s) 1642, 1858
BstXI CCANNNNNNTGG 1 cut(s) 146
BstYI RGATCY 2 cut(s) 1642, 1858
BsuI GTATCC 2 cut(s) 912, 1277
BsuRI GGCC 4 cut(s) 646, 829, 1919, 2127
BtsCI GGATG 7 cut(s) 379, 411, 424, 967, 1607, 1766, 2031
BtsI GCAGTG 1 cut(s) 1247
BtsIMutI CAGTG 6 cut(s) 971, 1247, 1689, 1801, 1821, 2141
Cac8I GCNNGC 1 cut(s) 1515
CaiI CAGNNNCTG 1 cut(s) 118
CfoI GCGC 1 cut(s) 2178
Cfr10I RCCGGY 1 cut(s) 1320
Cfr13I GGNCC 6 cut(s) 644, 719, 1276, 2125, 2126, 2212
CseI GACGC 1 cut(s) 1742
Csp6I GTAC 4 cut(s) 1058, 1484, 1664, 1952
CviQI GTAC 4 cut(s) 1058, 1484, 1664, 1952
DpnI GATC 8 cut(s) 378, 1308, 1565, 1601, 1632, 1644, 1860, 1928
DpnII GATC 8 cut(s) 376, 1306, 1563, 1599, 1630, 1642, 1858, 1926
DraIII CACNNNGTG 1 cut(s) 142
EaeI YGGCCR 1 cut(s) 1917
Eam1104I CTCTTC 3 cut(s) 1689, 2007, 2136
EarI CTCTTC 3 cut(s) 1689, 2007, 2136
Eco130I CCWWGG 4 cut(s) 324, 509, 1527, 2121
Eco147I AGGCCT 1 cut(s) 829
Eco24I GRGCYC 1 cut(s) 2129
Eco31I GGTCTC 2 cut(s) 453, 1597
Eco47I GGWCC 3 cut(s) 719, 1276, 2212
Eco57I CTGAAG 4 cut(s) 107, 1669, 1713, 1845
Eco88I CYCGRG 2 cut(s) 73, 1545
Eco91I GGTNACC 1 cut(s) 1492
EcoNI CCTNNNNNAGG 1 cut(s) 1301
EcoO109I RGGNCCY 3 cut(s) 2125, 2126, 2212
EcoO65I GGTNACC 1 cut(s) 1492
EcoRI GAATTC 1 cut(s) 1123
EcoRII CCWGG 3 cut(s) 824, 1278, 2034
EcoT14I CCWWGG 4 cut(s) 324, 509, 1527, 2121
EcoT22I ATGCAT 1 cut(s) 1784
EcoT38I GRGCYC 1 cut(s) 2129
ErhI CCWWGG 4 cut(s) 324, 509, 1527, 2121
FalI AAGNNNNNCTT 2 cut(s) 1931, 1963
FaqI GGGAC 2 cut(s) 1521, 1956
FauNDI CATATG 1 cut(s) 817
FbaI TGATCA 1 cut(s) 1599
Fnu4HI GCNGC 6 cut(s) 330, 695, 698, 1719, 1722, 2139
FokI GGATG 7 cut(s) 386, 418, 431, 954, 1594, 1773, 2018
FriOI GRGCYC 1 cut(s) 2129
Fsp4HI GCNGC 6 cut(s) 330, 695, 698, 1719, 1722, 2139
FspBI CTAG 9 cut(s) 546, 702, 723, 879, 990, 1005, 1170, 1298, 1833
GlaI GCGC 1 cut(s) 2177
GluI GCNGC 6 cut(s) 330, 695, 698, 1719, 1722, 2139
HaeIII GGCC 4 cut(s) 646, 829, 1919, 2127
HapII CCGG 2 cut(s) 1321, 1505
HgaI GACGC 1 cut(s) 1742
HhaI GCGC 1 cut(s) 2178
Hin6I GCGC 1 cut(s) 2176
HinP1I GCGC 1 cut(s) 2176
HindIII AAGCTT 1 cut(s) 570
HpaII CCGG 2 cut(s) 1321, 1505
HphI GGTGA 5 cut(s) 128, 144, 674, 1052, 1504
Hpy166II GTNNAC 3 cut(s) 152, 949, 959
Hpy188I TCNGA 6 cut(s) 181, 226, 562, 906, 1224, 1273
Hpy188III TCNNGA 7 cut(s) 1170, 1358, 1400, 1567, 1628, 1808, 2218
Hpy8I GTNNAC 3 cut(s) 152, 949, 959
HpyAV CCTTC 4 cut(s) 201, 211, 1148, 1933
HpyCH4III ACNGT 2 cut(s) 1573, 2070
HpyCH4IV ACGT 1 cut(s) 1023
HpyF10VI GCNNNNNNNGC 3 cut(s) 1474, 1680, 2190
HpySE526I ACGT 1 cut(s) 1023
HspAI GCGC 1 cut(s) 2176
Ksp22I TGATCA 1 cut(s) 1599
Kzo9I GATC 8 cut(s) 376, 1306, 1563, 1599, 1630, 1642, 1858, 1926
LmnI GCTCC 1 cut(s) 622
Lsp1109I GCAGC 6 cut(s) 341, 706, 709, 1705, 1708, 2125
LweI GCATC 3 cut(s) 1128, 1705, 1751
MaeI CTAG 9 cut(s) 546, 702, 723, 879, 990, 1005, 1170, 1298, 1833
MaeII ACGT 1 cut(s) 1023
MaeIII GTNAC 6 cut(s) 746, 1084, 1245, 1492, 1819, 2116
MalI GATC 8 cut(s) 378, 1308, 1565, 1601, 1632, 1644, 1860, 1928
MboI GATC 8 cut(s) 376, 1306, 1563, 1599, 1630, 1642, 1858, 1926
MboII GAAGA 6 cut(s) 58, 1095, 1132, 1706, 2024, 2123
MflI RGATCY 2 cut(s) 1642, 1858
MhlI GDGCHC 2 cut(s) 1023, 2129
MlsI TGGCCA 1 cut(s) 1919
MluCI AATT 4 cut(s) 845, 1123, 1426, 2039
MluNI TGGCCA 1 cut(s) 1919
MlyI GAGTC 3 cut(s) 314, 356, 1229
MmeI TCCRAC 3 cut(s) 272, 297, 1025
Mox20I TGGCCA 1 cut(s) 1919
Mph1103I ATGCAT 1 cut(s) 1784
MroXI GAANNNNTTC 3 cut(s) 573, 874, 1703
MscI TGGCCA 1 cut(s) 1919
MseI TTAA 5 cut(s) 285, 609, 732, 1488, 1638
MslI CAYNNNNRTG 8 cut(s) 138, 144, 357, 429, 591, 1136, 1547, 1794
Msp20I TGGCCA 1 cut(s) 1919
MspA1I CMGCKG 2 cut(s) 940, 1669
MspCI CTTAAG 2 cut(s) 284, 1487
MspI CCGG 2 cut(s) 1321, 1505
MspR9I CCNGG 4 cut(s) 826, 1280, 1506, 2036
Mva1269I GAATGC 2 cut(s) 1341, 1479
MvaI CCWGG 3 cut(s) 826, 1280, 2036
MwoI GCNNNNNNNGC 3 cut(s) 1474, 1680, 2190
NciI CCSGG 1 cut(s) 1506
NdeI CATATG 1 cut(s) 817
NdeII GATC 8 cut(s) 376, 1306, 1563, 1599, 1630, 1642, 1858, 1926
NlaIV GGNNCC 5 cut(s) 624, 645, 1351, 1644, 2127
NmeAIII GCCGAG 1 cut(s) 2045
NmuCI GTSAC 4 cut(s) 1084, 1245, 1492, 1819
NsiI ATGCAT 1 cut(s) 1784
NspI RCATGY 2 cut(s) 1456, 1793
OliI CACNNNNGTG 1 cut(s) 1547
PceI AGGCCT 1 cut(s) 829
PciI ACATGT 1 cut(s) 1452
PctI GAATGC 2 cut(s) 1341, 1479
PdmI GAANNNNTTC 3 cut(s) 573, 874, 1703
PfeI GAWTC 7 cut(s) 78, 98, 665, 875, 1075, 1184, 1728
PfoI TCCNGGA 1 cut(s) 2034
PkrI GCNGC 6 cut(s) 331, 696, 699, 1720, 1723, 2140
PleI GAGTC 3 cut(s) 314, 355, 1229
PpsI GAGTC 3 cut(s) 314, 355, 1229
Ppu21I YACGTR 1 cut(s) 1024
PpuMI RGGWCCY 1 cut(s) 2212
PscI ACATGT 1 cut(s) 1452
Psp5II RGGWCCY 1 cut(s) 2212
Psp6I CCWGG 3 cut(s) 824, 1278, 2034
PspEI GGTNACC 1 cut(s) 1492
PspGI CCWGG 3 cut(s) 824, 1278, 2034
PspN4I GGNNCC 5 cut(s) 624, 645, 1351, 1644, 2127
PspOMI GGGCCC 1 cut(s) 2125
PspPI GGNCC 6 cut(s) 644, 719, 1276, 2125, 2126, 2212
PspPPI RGGWCCY 1 cut(s) 2212
PstNI CAGNNNCTG 1 cut(s) 118
PsuI RGATCY 2 cut(s) 1642, 1858
PvuII CAGCTG 1 cut(s) 940
RsaI GTAC 4 cut(s) 1059, 1485, 1665, 1953
RsaNI GTAC 4 cut(s) 1058, 1484, 1664, 1952
RseI CAYNNNNRTG 8 cut(s) 138, 144, 357, 429, 591, 1136, 1547, 1794
SaqAI TTAA 5 cut(s) 285, 609, 732, 1488, 1638
SatI GCNGC 6 cut(s) 330, 695, 698, 1719, 1722, 2139
Sau3AI GATC 8 cut(s) 376, 1306, 1563, 1599, 1630, 1642, 1858, 1926
Sau96I GGNCC 6 cut(s) 644, 719, 1276, 2125, 2126, 2212
SchI GAGTC 3 cut(s) 314, 356, 1229
ScrFI CCNGG 4 cut(s) 826, 1280, 1506, 2036
SduI GDGCHC 2 cut(s) 1023, 2129
SfaNI GCATC 3 cut(s) 1128, 1705, 1751
SinI GGWCC 3 cut(s) 719, 1276, 2212
SmiMI CAYNNNNRTG 8 cut(s) 138, 144, 357, 429, 591, 1136, 1547, 1794
SmlI CTYRAG 3 cut(s) 284, 1487, 2000
SmoI CTYRAG 3 cut(s) 284, 1487, 2000
Sse9I AATT 4 cut(s) 845, 1123, 1426, 2039
SseBI AGGCCT 1 cut(s) 829
SsiI CCGC 1 cut(s) 1669
SspI AATATT 3 cut(s) 412, 505, 1374
SspMI CTAG 9 cut(s) 546, 702, 723, 879, 990, 1005, 1170, 1298, 1833
StuI AGGCCT 1 cut(s) 829
StyD4I CCNGG 4 cut(s) 824, 1278, 1504, 2034
StyI CCWWGG 4 cut(s) 324, 509, 1527, 2121
TaaI ACNGT 2 cut(s) 1573, 2070
TaiI ACGT 1 cut(s) 1026
TaqI TCGA 4 cut(s) 194, 1341, 1566, 1807
TasI AATT 4 cut(s) 845, 1123, 1426, 2039
TatI WGTACW 3 cut(s) 1057, 1483, 1951
TfiI GAWTC 7 cut(s) 78, 98, 665, 875, 1075, 1184, 1728
Tru1I TTAA 5 cut(s) 285, 609, 732, 1488, 1638
Tru9I TTAA 5 cut(s) 285, 609, 732, 1488, 1638
TscAI CASTG 6 cut(s) 978, 1254, 1696, 1801, 1828, 2148
TseFI GTSAC 4 cut(s) 1084, 1245, 1492, 1819
TseI GCWGC 6 cut(s) 329, 694, 697, 1718, 1721, 2138
Tsp45I GTSAC 4 cut(s) 1084, 1245, 1492, 1819
TspGWI ACGGA 1 cut(s) 1851
TspRI CASTG 6 cut(s) 978, 1254, 1696, 1801, 1828, 2148
Vha464I CTTAAG 2 cut(s) 284, 1487
VpaK11BI GGWCC 3 cut(s) 719, 1276, 2212
XagI CCTNNNNNAGG 1 cut(s) 1301
XapI RAATTY 2 cut(s) 845, 1123
XbaI TCTAGA 1 cut(s) 1169
XceI RCATGY 2 cut(s) 1456, 1793
XcmI CCANNNNNNNNNTGG 1 cut(s) 1862
XmnI GAANNNNTTC 3 cut(s) 573, 874, 1703
XspI CTAG 9 cut(s) 546, 702, 723, 879, 990, 1005, 1170, 1298, 1833
Zsp2I ATGCAT 1 cut(s) 1784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.