Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0005632

Physical Location & Seq

Genomic Coordinates Forward (+)

20802704 .. 20809502

Gene Structure 6799 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g21280.17

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2862 bp

ATGCTTGAGAAGAAGATATTCGAGAATGGGTTTGCTGAAAGAGATAACGAGCATTCCCATTCTTCACTTGAAAAGGTTGACCCTGGGAAGCCTGCATCACTGACATGGCAACGAAAATTAAACAGCACGGGCAACGCACCTTTGCCATTCAATCTATATTTAAAAGAGATCATTCATTTGGCTCCAATAGGTATTCGGCTATGGCGTCATCTACGAGAAGAAGCTGCTAACGGAAGGGAGGGCTTCATTAATCCATTTGTTAAGCACCATTTGACATCTAATCATGGTGTCCCACTTGGTGGAATTGGGGCAGGAAACATCGGAAGAAGTTATAGTGGTGATTTTCAGCGGTGGCAGCTCTTCCCTGGAAGATGTGAAGAGAAACCTGTTTTAGCACAAGATCGATCAATTTTCTTTGTTTCCCGCACGAATGGTGAAAAATACTCTACTGTGCTCTGTCCGAGGATCCCAGACGTTCTGAAAGAAAGTCAAGTTTCAGGGATTGGATCTTGGGACTGGAATCTGAACGGGGATAATTCTACATATCATGCCCTTTTCCCAAGGGCTTGGTCTGTTTACGATGGTGAACCTGATCCAGCTCTCAAAGTAGTCTGTCGTCAAATTTCGCCTTTTATTCCCCATAATTACAAGGAGAGCAGCCTACCTGTTTCAGTTTTTACTTACACGATATATAATTCTGGGAAGACTGCAGCCGATGTCACACTGCTTTTCACTTGGGCAAATTCTGTTGGAGGGATTTCTGAATTTTCTGGTCATCACTCCAATTCAAGAGCAGTGATGAAGGATGGCGTGCATGGCGTACTTCTACATCACAAGACTGCAGATGGGCTGCCCCCAGTGACATTTGCAATAGCAGCACAGGAGACTGATGGTGTTCACGTATCAGAGTGCCCTTGCTTTGTGATTTCTGGCGACTCCGAAGGTATCACAGCTAAAGAAATGTGGAGTGAGATAAAAGAGCATGGATCCTTTGACAGTCTTAATTCTGCAGAAACGCCATTACCTTCAGAACCTGGATCATCTATTGGGGCAGCCATTGCTGCTTCTGTGGCAGTTCCACCTGATGGAGTACGCACTGTAACATTTTCATTGGCATGGGATTGCCCAGAAGTAAAATTTATGGGTGGGAAGACATATCACAGGCGGTACACTAAATTCTATGGCAAACTTGGGGATGCAGCTGCAAATATTGCTCATGATGCTATTCTTGAGCATCACCATTGGGAATCCCAGATTGAAGCATGGCAAAGACCAGTTCTTGAGGACAAGAGACTTCCTGAATGGTACCCTGTCACTCTGTTCAATGAGCTCTACATTCTGAATTCCGGGGGCACAGTTTGGACAGATGGATCACTGCCAGTCCATAGCTTAACGAGCATTGGAGAAAGGAAGTTTTCCCTGGATAAGTCATCATTAGGTTTGAAAAGCGTCATTGATGCATCCCAACAAAATGATACTGCTATTGACATTCTTGGAAGGATGATATCAATACTTGAGCAAGTTCATTCTCCCATAGCATCAAACCCTGCATTTGGAACAAATCTCCTTCAGGAGGGAGAAGAAAACATTGGCCAATTTCTCTGTCTTGAAGGAATTGAATATCATATGTGGAACAGTTACGATGTCCATTTCTACTCTTCGTTTGCACTAGTCATGCTATTCCCAAAACTTGAGCTCAGCATCCAACGGGACTTTGCGGCAGCAGTAATGATGCACGACCCCTCTAAGATGAAACTTCTATCTGATGGAAAATGGGTCCAAAGAAAGGTTCTTGGAGCTGTTCCTCATGATATCGGCCTCCATGACCCCTGGTTTGAAGTAAATGCTTACAACCTGTATGACACGGATAGGTGGAAAGACTTGAATCCTAAGTTTGTTCTCCAAGTTTACAGGGATGTGGTTGCCACTGGTGATAAGAAATTTGCAGAAGCCGTTTGGCCCGCTGTTTACGTTGCAATGGCTTATATGGAACAATTTGATAAAGATGGCGATGGAATGGTTGAGAGTGATGGCTCCCCAGATCAGACTTATGATACGTGGTCGGTCTCTGGTGTGGGTGCATATAGTGGTGGGCTGTGGGTAGCAGCATTGCAGGCTGCATCAGCCATGGCAAGAGAAGTAGGTGACAAGGGTTCAGAGGTTTATTTTTGGCACAAGTATCAGAAGGCAAAATCTGTGTATGCGAAATTATGGAATGGATCTTACTTTAATTATGACAACAGTGGTCAAACATCAAGTTCATCAATCCAAGCTGATCAACTGGCCGGACAATGGTATGCAAGAGCATCCGGTCAGTTGCCAATTGTTGATGAAGACAAGGCACGGAGTGCGCTGGAAACGGTTTATAATTACAACGTCCTAAAGTTTAAGGACGGGAGACAAGGAGCAGTTAATGGGATGCTACCTGATGGAAAGGTTGACATGTCAGCAATGCAGTCAAGAGAAATATGGCCTGGAGTTACATACGCTTTAGCTGCAACGATGATTCAGGAAGATATGGTTGATATAGGATTTCATACTGCGGCTGGAGTATATGAAGCTGCATGGTCCAAAGAAGGTCTTGGATACTCTTTTCAAACTCCCGAAGCTTGGACCACCAGCGGAGAATTCAGATCTTTAACTTACATGCGCCCTCTGGCCATTTGGTCAATGCAGTGGGCATTATCAAAACCACCGCTGTTCAAGCAGGAGACGGAGTTGGAAGCAGCTGAAGTTTCTTCGCTTAGGCACGAGGCTGGATTCTCAAAAGTTGCTCAGCTTCTAAAGTTGCCGGAAGACGATTCGTCAAGAAGTATTTTGCAGACTGTTTTCGATTATACTTGCAAGAGGATGTGGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004348 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005790 GO:0005886 GO:0006082 GO:0006629 GO:0006643 GO:0006664 GO:0006665 GO:0006687 GO:0006807 GO:0007275 GO:0007399 GO:0007417 GO:0008150 GO:0008152 GO:0008202 GO:0008206 GO:0008422 GO:0009056 GO:0009987 GO:0012505 GO:0015926 GO:0016020 GO:0016021 GO:0016137 GO:0016139 GO:0016787 GO:0016798 GO:0019752 GO:0021953 GO:0021954 GO:0022008 GO:0030154 GO:0030182 GO:0031224 GO:0032501 GO:0032502 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0048468 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0071704 GO:0071944 GO:1901135 GO:1901136 GO:1901360 GO:1901564 GO:1901575 GO:1901615 GO:1901657 GO:1901658 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00511 ko00600 ko01100 map00511 map00600 map01100

Pfam Domains

Protein Families

DUF608 Glyco_hydr_116N

Protein Analysis

954

Amino Acids

106.11

Weight (kDa)

5.57

Isoelectric Point (pI)

38.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49900 AT5G49900 AT5G49900
fragaria_vesca	FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140
malus_domestica	MD08G1245400.v1.1 MD15G1440400.v1.1
prunus_persica	Prupe.1G582500_v2.0.a1 Prupe.1G582500_v2.0.a1
pyrus_communis	pycom08g21280 pycom15g38820
rosa_chinensis	RchiOBHm_Chr7g0241141
rosa_laevigata	RLG00000000592
rosa_multiflora	Rmu_sc0006665.1_g000004
rosa_roxburghii	Rroxscaffold_3G00219230
rosa_rugosa	Rorug07G0343100 Rorug07G0343200 Rorug07G0343300 Rorug07G0343400.1 Rorug07G0343500.1
rosa_samantha	Rh7AG498100 Rh7BG468700 Rh7CG514800 Rh7DG482200
rosa_wichuraiana	Rw7G042010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2367
Acc65I	GGTACC	1 cut(s)	1305
AccB1I	GGYRCC	1 cut(s)	1305
AccB7I	CCANNNNNTGG	2 cut(s)	299, 1085
AciI	CCGC	8 cut(s)	349, 424, 1165, 1718, 1962, 2543, 2622, 2696
AclWI	GGATC	9 cut(s)	460, 473, 514, 587, 981, 994, 1045, 1378, 2227
AcoI	YGGCCR	3 cut(s)	1591, 2283, 2658
AcsI	RAATTY	8 cut(s)	621, 742, 764, 1136, 1175, 1342, 1940, 2627
AcuI	CTGAAG	3 cut(s)	1011, 1553, 2751
AcyI	GRCGYC	1 cut(s)	205
AdeI	CACNNNGTG	2 cut(s)	299, 2348
AfaI	GTAC	4 cut(s)	822, 1092, 1169, 1307
AfiI	CCNNNNNNNGG	7 cut(s)	299, 1085, 1553, 1573, 1786, 2292, 2610
AflIII	ACRYGT	1 cut(s)	2442
AhdI	GACNNNNNGTC	1 cut(s)	2803
AhlI	ACTAGT	1 cut(s)	1669
AjnI	CCWGG	6 cut(s)	82, 364, 1033, 1419, 1829, 2473
AjuI	GAANNNNNNNTTGG	4 cut(s)	1572, 1604, 1773, 1805
Alw21I	GWGCWC	3 cut(s)	456, 1332, 1698
Alw26I	GTCTC	5 cut(s)	878, 1285, 2071, 2392, 2705
AlwI	GGATC	9 cut(s)	460, 473, 514, 587, 981, 994, 1045, 1378, 2227
AlwNI	CAGNNNCTG	1 cut(s)	1034
AoxI	GGCC	6 cut(s)	1591, 1816, 1958, 2283, 2471, 2658
ApoI	RAATTY	8 cut(s)	621, 742, 764, 1136, 1175, 1342, 1940, 2627
ArsI	GACNNNNNNTTYG	2 cut(s)	1817, 1849
AseI	ATTAAT	1 cut(s)	249
Asp700I	GAANNNNTTC	1 cut(s)	17
Asp718I	GGTACC	1 cut(s)	1305
AspLEI	GCGC	2 cut(s)	2353, 2652
AspS9I	GGNCC	4 cut(s)	1777, 1959, 2568, 2613
AsuC2I	CCSGG	1 cut(s)	1348
AsuHPI	GGTGA	6 cut(s)	350, 446, 596, 1229, 1943, 2156
AvaII	GGWCC	3 cut(s)	1777, 2568, 2613
BaeGI	GKGCMC	2 cut(s)	914, 1355
BalI	TGGCCA	2 cut(s)	1593, 2660
BamHI	GGATCC	2 cut(s)	465, 986
BanI	GGYRCC	1 cut(s)	1305
BanII	GRGCYC	2 cut(s)	1332, 1698
BauI	CACGAG	1 cut(s)	2750
BbsI	GAAGAC	4 cut(s)	710, 1157, 2340, 2802
Bbv12I	GWGCWC	3 cut(s)	456, 1332, 1698
BceAI	ACGGC	1 cut(s)	1937
BciT130I	CCWGG	6 cut(s)	84, 366, 1035, 1421, 1831, 2475
BciVI	GTATCC	1 cut(s)	2579
BclI	TGATCA	1 cut(s)	2275
BcnI	CCSGG	1 cut(s)	1348
BcoDI	GTCTC	5 cut(s)	878, 1285, 2071, 2392, 2705
BcuI	ACTAGT	1 cut(s)	1669
BfaI	CTAG	1 cut(s)	1670
BfmI	CTRYAG	3 cut(s)	708, 840, 1008
BfuI	GTATCC	1 cut(s)	2579
BglII	AGATCT	1 cut(s)	2633
BlpI	GCTNAGC	2 cut(s)	1697, 2775
Bme1390I	CCNGG	7 cut(s)	84, 366, 1035, 1348, 1421, 1831, 2475
Bme18I	GGWCC	3 cut(s)	1777, 2568, 2613
BmeRI	GACNNNNNGTC	1 cut(s)	2803
BmgT120I	GGNCC	4 cut(s)	1777, 1959, 2568, 2613
BmiI	GGNNCC	6 cut(s)	183, 467, 988, 1307, 1778, 2035
BmrFI	CCNGG	7 cut(s)	84, 366, 1035, 1348, 1421, 1831, 2475
BmrI	ACTGGG	1 cut(s)	851
BmuI	ACTGGG	1 cut(s)	851
BpiI	GAAGAC	4 cut(s)	710, 1157, 2340, 2802
BpmI	CTGGAG	2 cut(s)	2496, 2568
Bpu10I	CCTNAGC	1 cut(s)	2744
Bpu1102I	GCTNAGC	2 cut(s)	1697, 2775
BpuEI	CTTGAG	5 cut(s)	26, 1250, 1301, 1535, 1712
BpuMI	CCSGG	1 cut(s)	1348
Bsa29I	ATCGAT	1 cut(s)	403
BsaAI	YACGTR	2 cut(s)	901, 2058
BsaHI	GRCGYC	1 cut(s)	205
BsaI	GGTCTC	1 cut(s)	2071
BsaJI	CCNNGG	9 cut(s)	82, 83, 364, 461, 560, 1347, 1419, 1829, 2127
BsaWI	WCCGGW	1 cut(s)	2309
BsaXI	ACNNNNNCTCC	2 cut(s)	2702, 2732
Bsc4I	CCNNNNNNNGG	7 cut(s)	299, 1085, 1553, 1573, 1786, 2292, 2610
Bse1I	ACTGG	6 cut(s)	521, 857, 1274, 1379, 1933, 2286
Bse3DI	GCAATG	4 cut(s)	1056, 1983, 2108, 2457
BseBI	CCWGG	6 cut(s)	84, 366, 1035, 1421, 1831, 2475
BseCI	ATCGAT	1 cut(s)	403
BseDI	CCNNGG	9 cut(s)	82, 83, 364, 461, 560, 1347, 1419, 1829, 2127
BseGI	GGATG	9 cut(s)	811, 1201, 1460, 1506, 1701, 1921, 2306, 2424, 2856
BseLI	CCNNNNNNNGG	7 cut(s)	299, 1085, 1553, 1573, 1786, 2292, 2610
BseMI	GCAATG	4 cut(s)	1056, 1983, 2108, 2457
BseMII	CTCAG	2 cut(s)	1711, 2789
BseNI	ACTGG	6 cut(s)	521, 857, 1274, 1379, 1933, 2286
BseSI	GKGCMC	2 cut(s)	914, 1355
BshFI	GGCC	6 cut(s)	1593, 1818, 1960, 2285, 2473, 2660
BshNI	GGYRCC	1 cut(s)	1305
BshVI	ATCGAT	1 cut(s)	403
BsiHKAI	GWGCWC	3 cut(s)	456, 1332, 1698
BsiSI	CCGG	4 cut(s)	1347, 2286, 2310, 2792
BslFI	GGGAC	3 cut(s)	275, 527, 1724
BslI	CCNNNNNNNGG	7 cut(s)	299, 1085, 1553, 1573, 1786, 2292, 2610
BsmAI	GTCTC	5 cut(s)	878, 1285, 2071, 2392, 2705
BsmBI	CGTCTC	1 cut(s)	2705
BsmFI	GGGAC	3 cut(s)	275, 527, 1724
BsmI	GAATGC	1 cut(s)	52
BsnI	GGCC	6 cut(s)	1593, 1818, 1960, 2285, 2473, 2660
Bso31I	GGTCTC	1 cut(s)	2071
Bsp1286I	GDGCHC	5 cut(s)	456, 914, 1332, 1355, 1698
Bsp1720I	GCTNAGC	2 cut(s)	1697, 2775
Bsp19I	CCATGG	1 cut(s)	2127
BspACI	CCGC	8 cut(s)	349, 424, 1165, 1718, 1962, 2543, 2622, 2696
BspANI	GGCC	6 cut(s)	1593, 1818, 1960, 2285, 2473, 2660
BspCNI	CTCAG	2 cut(s)	1710, 2788
BspDI	ATCGAT	1 cut(s)	403
BspHI	TCATGA	2 cut(s)	1216, 1807
BspLI	GGNNCC	6 cut(s)	183, 467, 988, 1307, 1778, 2035
BspMAI	CTGCAG	3 cut(s)	712, 844, 1012
BspPI	GGATC	9 cut(s)	460, 473, 514, 587, 981, 994, 1045, 1378, 2227
BspQI	GCTCTTC	1 cut(s)	365
BspT107I	GGYRCC	1 cut(s)	1305
BspTNI	GGTCTC	1 cut(s)	2071
BsrDI	GCAATG	4 cut(s)	1056, 1983, 2108, 2457
BsrI	ACTGG	6 cut(s)	521, 857, 1274, 1379, 1933, 2286
BssECI	CCNNGG	9 cut(s)	82, 83, 364, 461, 560, 1347, 1419, 1829, 2127
BssNI	GRCGYC	1 cut(s)	205
BssSI	CACGAG	1 cut(s)	2750
BssT1I	CCWWGG	2 cut(s)	560, 2127
Bst2BI	CACGAG	1 cut(s)	2750
Bst2UI	CCWGG	6 cut(s)	84, 366, 1035, 1421, 1831, 2475
Bst4CI	ACNGT	8 cut(s)	451, 998, 1099, 1357, 1637, 2243, 2362, 2827
Bst6I	CTCTTC	3 cut(s)	365, 372, 1663
BstACI	GRCGYC	1 cut(s)	205
BstAPI	GCANNNNNTGC	3 cut(s)	1058, 1211, 2348
BstBAI	YACGTR	2 cut(s)	901, 2058
BstC8I	GCNNGC	4 cut(s)	93, 812, 1962, 2115
BstDEI	CTNAG	5 cut(s)	1697, 1746, 1890, 2744, 2775
BstDSI	CCRYGG	1 cut(s)	2127
BstENI	CCTNNNNNAGG	1 cut(s)	1571
BstF5I	GGATG	9 cut(s)	811, 1201, 1460, 1506, 1701, 1921, 2306, 2424, 2856
BstHHI	GCGC	2 cut(s)	2353, 2652
BstMAI	GTCTC	5 cut(s)	878, 1285, 2071, 2392, 2705
BstNI	CCWGG	6 cut(s)	84, 366, 1035, 1421, 1831, 2475
BstNSI	RCATGY	2 cut(s)	2446, 2650
BstSCI	CCNGG	7 cut(s)	82, 364, 1033, 1346, 1419, 1829, 2473
BstSFI	CTRYAG	3 cut(s)	708, 840, 1008
BstSLI	GKGCMC	2 cut(s)	914, 1355
BstV2I	GAAGAC	4 cut(s)	710, 1157, 2340, 2802
BstX2I	RGATCY	5 cut(s)	465, 506, 986, 2219, 2633
BstXI	CCANNNNNNTGG	1 cut(s)	567
BstYI	RGATCY	5 cut(s)	465, 506, 986, 2219, 2633
Bsu15I	ATCGAT	1 cut(s)	403
BsuI	GTATCC	1 cut(s)	2579
BsuRI	GGCC	6 cut(s)	1593, 1818, 1960, 2285, 2473, 2660
BsuTUI	ATCGAT	1 cut(s)	403
BtgI	CCRYGG	1 cut(s)	2127
BtgZI	GCGATG	1 cut(s)	2025
BtsCI	GGATG	9 cut(s)	811, 1201, 1460, 1506, 1701, 1921, 2306, 2424, 2856
BtsI	GCAGTG	4 cut(s)	722, 801, 1373, 2681
BtsIMutI	CAGTG	9 cut(s)	98, 722, 801, 864, 1095, 1373, 1926, 2248, 2681
Cac8I	GCNNGC	4 cut(s)	93, 812, 1962, 2115
CaiI	CAGNNNCTG	1 cut(s)	1034
CciI	TCATGA	2 cut(s)	1216, 1807
CfoI	GCGC	2 cut(s)	2353, 2652
Cfr13I	GGNCC	4 cut(s)	1777, 1959, 2568, 2613
ClaI	ATCGAT	1 cut(s)	403
CseI	GACGC	2 cut(s)	194, 1438
Csp6I	GTAC	4 cut(s)	821, 1091, 1168, 1306
CviQI	GTAC	4 cut(s)	821, 1091, 1168, 1306
DdeI	CTNAG	5 cut(s)	1697, 1746, 1890, 2744, 2775
DraI	TTTAAA	1 cut(s)	162
DraIII	CACNNNGTG	2 cut(s)	299, 2348
DriI	GACNNNNNGTC	1 cut(s)	2803
EaeI	YGGCCR	3 cut(s)	1591, 2283, 2658
Eam1104I	CTCTTC	3 cut(s)	365, 372, 1663
Eam1105I	GACNNNNNGTC	1 cut(s)	2803
EarI	CTCTTC	3 cut(s)	365, 372, 1663
Ecl136II	GAGCTC	2 cut(s)	1330, 1696
Eco130I	CCWWGG	2 cut(s)	560, 2127
Eco24I	GRGCYC	2 cut(s)	1332, 1698
Eco31I	GGTCTC	1 cut(s)	2071
Eco32I	GATATC	2 cut(s)	1506, 1813
Eco47I	GGWCC	3 cut(s)	1777, 2568, 2613
Eco53kI	GAGCTC	2 cut(s)	1330, 1696
Eco57I	CTGAAG	3 cut(s)	1011, 1553, 2751
EcoICRI	GAGCTC	2 cut(s)	1330, 1696
EcoNI	CCTNNNNNAGG	1 cut(s)	1571
EcoRI	GAATTC	2 cut(s)	1342, 2627
EcoRII	CCWGG	6 cut(s)	82, 364, 1033, 1419, 1829, 2473
EcoRV	GATATC	2 cut(s)	1506, 1813
EcoT14I	CCWWGG	2 cut(s)	560, 2127
EcoT22I	ATGCAT	1 cut(s)	1462
EcoT38I	GRGCYC	2 cut(s)	1332, 1698
ErhI	CCWWGG	2 cut(s)	560, 2127
Esp3I	CGTCTC	1 cut(s)	2705
FalI	AAGNNNNNCTT	2 cut(s)	2565, 2597
FaqI	GGGAC	3 cut(s)	275, 527, 1724
FauI	CCCGC	2 cut(s)	431, 1969
FauNDI	CATATG	1 cut(s)	1626
FbaI	TGATCA	1 cut(s)	2275
FokI	GGATG	8 cut(s)	818, 1208, 1447, 1513, 1688, 1928, 2293, 2431
FriOI	GRGCYC	2 cut(s)	1332, 1698
FspBI	CTAG	1 cut(s)	1670
GlaI	GCGC	2 cut(s)	2352, 2651
GsuI	CTGGAG	2 cut(s)	2496, 2568
HaeIII	GGCC	6 cut(s)	1593, 1818, 1960, 2285, 2473, 2660
HapII	CCGG	4 cut(s)	1347, 2286, 2310, 2792
HgaI	GACGC	2 cut(s)	194, 1438
HhaI	GCGC	2 cut(s)	2353, 2652
Hin1I	GRCGYC	1 cut(s)	205
Hin6I	GCGC	2 cut(s)	2351, 2650
HinP1I	GCGC	2 cut(s)	2351, 2650
HincII	GTYRAC	2 cut(s)	79, 2440
HindII	GTYRAC	2 cut(s)	79, 2440
HindIII	AAGCTT	1 cut(s)	2607
HinfI	GANTC	7 cut(s)	520, 935, 1247, 1885, 2506, 2760, 2801
HpaII	CCGG	4 cut(s)	1347, 2286, 2310, 2792
HphI	GGTGA	6 cut(s)	350, 446, 596, 1229, 1943, 2156
Hpy166II	GTNNAC	8 cut(s)	79, 577, 587, 898, 1170, 1909, 1969, 2440
Hpy8I	GTNNAC	8 cut(s)	79, 577, 587, 898, 1170, 1909, 1969, 2440
HpyAV	CCTTC	9 cut(s)	228, 796, 935, 1035, 1491, 1577, 1604, 2179, 2570
HpyCH4III	ACNGT	8 cut(s)	451, 998, 1099, 1357, 1637, 2243, 2362, 2827
HpyCH4IV	ACGT	5 cut(s)	474, 900, 1971, 2057, 2376
HpyF3I	CTNAG	5 cut(s)	1697, 1746, 1890, 2744, 2775
HpySE526I	ACGT	5 cut(s)	474, 900, 1971, 2057, 2376
Hsp92I	GRCGYC	1 cut(s)	205
HspAI	GCGC	2 cut(s)	2351, 2650
KpnI	GGTACC	1 cut(s)	1309
Ksp22I	TGATCA	1 cut(s)	2275
LguI	GCTCTTC	1 cut(s)	365
LmnI	GCTCC	4 cut(s)	187, 1796, 2039, 2405
MaeI	CTAG	1 cut(s)	1670
MaeII	ACGT	5 cut(s)	474, 900, 1971, 2057, 2376
MaeIII	GTNAC	7 cut(s)	718, 859, 1099, 1312, 1637, 2144, 2479
MfeI	CAATTG	1 cut(s)	2322
MflI	RGATCY	5 cut(s)	465, 506, 986, 2219, 2633
MhlI	GDGCHC	5 cut(s)	456, 914, 1332, 1355, 1698
MlsI	TGGCCA	2 cut(s)	1593, 2660
MluNI	TGGCCA	2 cut(s)	1593, 2660
MlyI	GAGTC	1 cut(s)	929
MmeI	TCCRAC	3 cut(s)	730, 1729, 2700
Mox20I	TGGCCA	2 cut(s)	1593, 2660
Mph1103I	ATGCAT	1 cut(s)	1462
MroXI	GAANNNNTTC	1 cut(s)	17
MscI	TGGCCA	2 cut(s)	1593, 2660
MslI	CAYNNNNRTG	2 cut(s)	103, 1114
Msp20I	TGGCCA	2 cut(s)	1593, 2660
MspA1I	CMGCKG	6 cut(s)	349, 1202, 1964, 2622, 2698, 2729
MspI	CCGG	4 cut(s)	1347, 2286, 2310, 2792
MspR9I	CCNGG	7 cut(s)	84, 366, 1035, 1348, 1421, 1831, 2475
MunI	CAATTG	1 cut(s)	2322
Mva1269I	GAATGC	1 cut(s)	52
MvaI	CCWGG	6 cut(s)	84, 366, 1035, 1421, 1831, 2475
NciI	CCSGG	1 cut(s)	1348
NcoI	CCATGG	1 cut(s)	2127
NdeI	CATATG	1 cut(s)	1626
NlaIV	GGNNCC	6 cut(s)	183, 467, 988, 1307, 1778, 2035
NmuCI	GTSAC	4 cut(s)	718, 859, 1312, 2144
NsiI	ATGCAT	1 cut(s)	1462
NspI	RCATGY	2 cut(s)	2446, 2650
PagI	TCATGA	2 cut(s)	1216, 1807
PasI	CCCWGGG	1 cut(s)	83
PciI	ACATGT	1 cut(s)	2442
PciSI	GCTCTTC	1 cut(s)	365
PcsI	WCGNNNNNNNCGW	1 cut(s)	202
PctI	GAATGC	1 cut(s)	52
PdmI	GAANNNNTTC	1 cut(s)	17
PfeI	GAWTC	6 cut(s)	520, 1247, 1885, 2506, 2760, 2801
PflMI	CCANNNNNTGG	2 cut(s)	299, 1085
PleI	GAGTC	1 cut(s)	929
PpsI	GAGTC	1 cut(s)	929
Ppu21I	YACGTR	2 cut(s)	901, 2058
PscI	ACATGT	1 cut(s)	2442
PshBI	ATTAAT	1 cut(s)	249
PsiI	TTATAA	1 cut(s)	2367
Psp124BI	GAGCTC	2 cut(s)	1332, 1698
Psp6I	CCWGG	6 cut(s)	82, 364, 1033, 1419, 1829, 2473
PspGI	CCWGG	6 cut(s)	82, 364, 1033, 1419, 1829, 2473
PspN4I	GGNNCC	6 cut(s)	183, 467, 988, 1307, 1778, 2035
PspPI	GGNCC	4 cut(s)	1777, 1959, 2568, 2613
PstI	CTGCAG	3 cut(s)	712, 844, 1012
PstNI	CAGNNNCTG	1 cut(s)	1034
PsuI	RGATCY	5 cut(s)	465, 506, 986, 2219, 2633
PvuII	CAGCTG	2 cut(s)	1202, 2729
RsaI	GTAC	4 cut(s)	822, 1092, 1169, 1307
RsaNI	GTAC	4 cut(s)	821, 1091, 1168, 1306
RseI	CAYNNNNRTG	2 cut(s)	103, 1114
SacI	GAGCTC	2 cut(s)	1332, 1698
SapI	GCTCTTC	1 cut(s)	365
Sau96I	GGNCC	4 cut(s)	1777, 1959, 2568, 2613
SchI	GAGTC	1 cut(s)	929
ScrFI	CCNGG	7 cut(s)	84, 366, 1035, 1348, 1421, 1831, 2475
SduI	GDGCHC	5 cut(s)	456, 914, 1332, 1355, 1698
SfcI	CTRYAG	3 cut(s)	708, 840, 1008
SinI	GGWCC	3 cut(s)	1777, 2568, 2613
SmiMI	CAYNNNNRTG	2 cut(s)	103, 1114
SmlI	CTYRAG	5 cut(s)	5, 1229, 1280, 1514, 1691
SmoI	CTYRAG	5 cut(s)	5, 1229, 1280, 1514, 1691
SpeI	ACTAGT	1 cut(s)	1669
SsiI	CCGC	8 cut(s)	349, 424, 1165, 1718, 1962, 2543, 2622, 2696
SspI	AATATT	1 cut(s)	1210
SspMI	CTAG	1 cut(s)	1670
SstI	GAGCTC	2 cut(s)	1332, 1698
StyD4I	CCNGG	7 cut(s)	82, 364, 1033, 1346, 1419, 1829, 2473
StyI	CCWWGG	2 cut(s)	560, 2127
TaaI	ACNGT	8 cut(s)	451, 998, 1099, 1357, 1637, 2243, 2362, 2827
TaiI	ACGT	5 cut(s)	477, 903, 1974, 2060, 2379
TaqI	TCGA	3 cut(s)	21, 403, 2832
TaqII	GACCGA	1 cut(s)	2053
TauI	GCSGC	2 cut(s)	1721, 2546
TfiI	GAWTC	6 cut(s)	520, 1247, 1885, 2506, 2760, 2801
TscAI	CASTG	9 cut(s)	105, 729, 801, 864, 1102, 1380, 1933, 2248, 2681
TseFI	GTSAC	4 cut(s)	718, 859, 1312, 2144
Tsp45I	GTSAC	4 cut(s)	718, 859, 1312, 2144
TspGWI	ACGGA	4 cut(s)	246, 1880, 2359, 2729
TspRI	CASTG	9 cut(s)	105, 729, 801, 864, 1102, 1380, 1933, 2248, 2681
Van91I	CCANNNNNTGG	2 cut(s)	299, 1085
VpaK11BI	GGWCC	3 cut(s)	1777, 2568, 2613
VspI	ATTAAT	1 cut(s)	249
XagI	CCTNNNNNAGG	1 cut(s)	1571
XapI	RAATTY	8 cut(s)	621, 742, 764, 1136, 1175, 1342, 1940, 2627
XceI	RCATGY	2 cut(s)	2446, 2650
XmnI	GAANNNNTTC	1 cut(s)	17
XspI	CTAG	1 cut(s)	1670
Zsp2I	ATGCAT	1 cut(s)	1462

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.