Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0005632

Physical Location & Seq

Genomic Coordinates Reverse (-)

68713822 .. 68722859

Gene Structure 9038 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG482200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

ATGGGTGACAAGGAGATATTGGAAAATGGGTTCGCTGAAAGAGATGAGCAACATTCTGAGTCTTCGATTGGCAAGGTTGACCCGGGGAAACCTGCATCACTGATGTGGCAGCGAAAACTAAACAGCAAGGGAAATGATATCGTGCAGTTCAATCTAACTTTGAAAGAAGTTATTCATTTGGCTCCAATTGGTCTTCGTCTATGGCGCCATCAACGAGAAGAAGCTGCTAAAGGAAGGGAGTCTATGATTGATCCATTTACTAAGCGCAGTCGATCATCTAGTCATGGTGTACCACTGGGTGGTATTGGAGGAGGAAGCATCGGAAGAAGTATAAGAGGTGAGTTTCAGCGCTGGCAGCTACTCCCCAGAACATGTGAAGAGGATCCAGTTTTAGCAGATCAATTTTCTGTATTTGTTTCCCGCAGCAATGGTGAAAAGTATTCTACTGTACTCTGTCCGAGGAACCCAGAGGTCAAAGGAAACAACGCTTCAGGGATTGGATCTTGGGACTGGAATTTGAAAGGGGATAAATCTACCTATCATGCCCTTTTCCCAAGGGCTTGGTCTGTTTATGAGGGTGAACCTGACCCAGCACTCAAAATAGTCTGTCGTCAAATTTCACCTATTATTCCCCATAATTACAAGGAGAGCAGCTTCCCTGTCTCAGTTTTTACTTTCACTCTATATAATTCTGGAAGTACTGCTGCAGATACCACTTTGATTTTCACATGGGCAAATTCTGTTGGAGGGCTTTCTGAAATTTCTGGTCAACACTTTAATTCAAGAGCAGAGGTGAAGGATGGCGTGCATAGTGTGCTTCTACATCACAAGAGTGCGACCGGAAAATCCCCATTGACGTTTGCAATAGCAGCAGAGCAGACTGATGGTGTTCACGTGTCAGAGTGCCCTTGCTTTGTGATATCTGGTGACTCCAAGGGTATTAGTGCTAAAGACATGTGGAATGAGATAAAACAGCATGGATCGTTTGACGGTCTTAATTCAGCTGAAACATCATTACCTTCAGAACAAGGATCGTCTATTGGGGCAGCCATTGCTGCATCTGTGACGGTACCCTCAGATGGAGTACGTACTGTAACATTTTCACTGGCATGGGATTGCCCGGAAATAGTTATGGGTGGAAAGACCTATTACAGGCGTTACACTAAATTCTATGGCACACGTGGGAATGCAGCTGCAAATATTGCTCATGATGCTATTCTCGAGCATCACAATTGGGAGTCCCAAGTCGAAGCATGGCAAAGACCAATTCTTGAAGATAAGAGACTTCCTGAATGGTACCCTGTTACTCTGTTCAATGAGCTATATTATCTTAATTCTGGCGGCACAATTTGGACAGATGGATCACCTCCTGTGCATAGTTTAGCAAGTATTGGAGGAAGGAAGTTTTCCCTTGATAAGTCCTCATTAGGTTTGAAAAACATCATTGATTCACCCCAGCAAAATGATACTGCTGTTGACATTCTTGGAAGAATGACTACAATACTCGAGCAAATTCACACGCCCATGGCATCAAATTCTGCATTTGGACCAAATCTACTTCAGGAGGGAGAAGAAAACATTGGTCAATTCCTTTATCTTGAAGGAGTTGAATATCACATGTGGAACACTTACGATGTCCATTTTTACTCATCTTTTTCATTGGTCATGCTATTTCCAAAACTTGAACTCAGCATACAAAGAGACTTTGCAGCAGCAGTAATGATGCACGACCCCAGTAAGATGAGTCTTTTATGTGATGGAAATTCGGTCCAAAGAAAGGTTCTTGGAGCTGTTCCCCACGATATTGGGATCCATGATCCATGGTTTGAAGTAAATGCTTATAATCTTTACAATACGGATAGGTGGAAAGACTTGAATCCTAAGTTTGTTCTCCAAGTTTACAGGGATGTGGTTGCCACTGGTGATAAGAAGTTTGCAGAAGCTGTTTGGCCTTCTGTTTATGTTGCAATGGCTTATATGGAACAATTTGACAGGGATGGTGATGGTATGATTGAGAATGAAGGCTTCCCTGATCAAACGTATGATACATGGTCTGTCTCTGGTGTGAGTGCATATAGCGGTGGGTTGTGGTTAGCAGCTCTGCAGGCTGCTTCAGCCATGGCAGGTGAAGTAGGTGACAAGGGTTCTGAGGATTATTTTTGGTGCAAGTTTCAGAAGGCAAAAGTGGTGTATGAAAAATTATGGAATGGATCTTACTTCAATTATGATAACAGTGGTCAGAGTGCAAGCTCATCAATTCAAGCAGATCAATTGGCTGGACAATGGTATACCAGAGCGTGTGGACTTTTGCCAATCGTTGATGAAGACAAGGCACATAGTGCATTGGAAAAGGTTTATACTTATAATGTCTTAAAGGTGAAGGGCGGGAAACTGGGGGCTGTTAACGGGATGCTTCCTGATGGAAAGGTTGACATGACATCAATGCAGTCAAGAGAAGTATGGTCAGGGGTCACATATGCTGTTGCTGCAACAATGATCCATGAAGATATGCTTGATATGGCATTTAACACTGCTGGTGGAATCTATGCAGCTGCTTGGTCTGAAGAAGGTCTTGGACTCTTTTCAGACCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004348 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005790 GO:0005886 GO:0006082 GO:0006629 GO:0006643 GO:0006664 GO:0006665 GO:0006687 GO:0006807 GO:0007275 GO:0007399 GO:0007417 GO:0008150 GO:0008152 GO:0008202 GO:0008206 GO:0008422 GO:0009056 GO:0009987 GO:0012505 GO:0015926 GO:0016020 GO:0016021 GO:0016137 GO:0016139 GO:0016787 GO:0016798 GO:0019752 GO:0021953 GO:0021954 GO:0022008 GO:0030154 GO:0030182 GO:0031224 GO:0032501 GO:0032502 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0048468 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0071704 GO:0071944 GO:1901135 GO:1901136 GO:1901360 GO:1901564 GO:1901575 GO:1901615 GO:1901657 GO:1901658 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00511 ko00600 ko01100 map00511 map00600 map01100

Pfam Domains

Protein Families

DUF608 Glyco_hydr_116N

Protein Analysis

864

Amino Acids

95.44

Weight (kDa)

5.38

Isoelectric Point (pI)

38.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydr_116N	PF12215	96 - 412	1.3e-108	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term
DUF608	PF04685	528 - 858	1e-149	Glycosyl-hydrolase family 116, catalytic region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49900 AT5G49900 AT5G49900
fragaria_vesca	FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140
malus_domestica	MD08G1245400.v1.1 MD15G1440400.v1.1
prunus_persica	Prupe.1G582500_v2.0.a1 Prupe.1G582500_v2.0.a1
pyrus_communis	pycom08g21280 pycom15g38820
rosa_chinensis	RchiOBHm_Chr7g0241141
rosa_laevigata	RLG00000000592
rosa_multiflora	Rmu_sc0006665.1_g000004
rosa_roxburghii	Rroxscaffold_3G00219230
rosa_rugosa	Rorug07G0343100 Rorug07G0343200 Rorug07G0343300 Rorug07G0343400.1 Rorug07G0343500.1
rosa_samantha	Rh7AG498100 Rh7BG468700 Rh7CG514800 Rh7DG482200
rosa_wichuraiana	Rw7G042010

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1842, 2364
AarI	CACCTGC	1 cut(s)	2114
Acc36I	ACCTGC	2 cut(s)	100, 2114
Acc65I	GGTACC	2 cut(s)	1069, 1296
AccB1I	GGYRCC	3 cut(s)	204, 1069, 1296
AccB7I	CCANNNNNTGG	1 cut(s)	299
AccI	GTMKAC	1 cut(s)	2288
AciI	CCGC	4 cut(s)	421, 1341, 2079, 2385
AcsI	RAATTY	8 cut(s)	514, 615, 736, 759, 1166, 1512, 1534, 1762
AcuI	CTGAAG	5 cut(s)	474, 1005, 1544, 2097, 2583
AcvI	CACGTG	2 cut(s)	895, 1181
AcyI	GRCGYC	1 cut(s)	205
AdeI	CACNNNGTG	2 cut(s)	299, 2339
AfaI	GTAC	7 cut(s)	291, 450, 700, 1071, 1086, 1090, 1298
AfeI	AGCGCT	1 cut(s)	350
AfiI	CCNNNNNNNGG	4 cut(s)	299, 1079, 1152, 1777
AflIII	ACRYGT	5 cut(s)	371, 894, 954, 1178, 1617
AjuI	GAANNNNNNNTTGG	6 cut(s)	1563, 1595, 1764, 1796, 2556, 2588
AleI	CACNNNNGTG	2 cut(s)	103, 831
AloI	GAACNNNNNNTCC	2 cut(s)	14, 46
Alw26I	GTCTC	4 cut(s)	667, 1276, 1695, 2062
AlwNI	CAGNNNCTG	1 cut(s)	1943
Ama87I	CYCGRG	3 cut(s)	82, 1220, 1505
Aor51HI	AGCGCT	1 cut(s)	350
AoxI	GGCC	1 cut(s)	1949
ApoI	RAATTY	8 cut(s)	514, 615, 736, 759, 1166, 1512, 1534, 1762
Asp700I	GAANNNNTTC	1 cut(s)	171
Asp718I	GGTACC	2 cut(s)	1069, 1296
AspLEI	GCGC	3 cut(s)	207, 267, 351
AspS9I	GGNCC	2 cut(s)	1547, 1768
AsuC2I	CCSGG	3 cut(s)	83, 84, 1121
AvaI	CYCGRG	3 cut(s)	82, 1220, 1505
AvaII	GGWCC	2 cut(s)	1547, 1768
BaeGI	GKGCMC	1 cut(s)	908
BaeI	ACNNNNGTAYC	2 cut(s)	1458, 1491
BamHI	GGATCC	2 cut(s)	382, 1809
BanI	GGYRCC	3 cut(s)	204, 1069, 1296
BarI	GAAGNNNNNNTAC	2 cut(s)	1480, 1512
BbrPI	CACGTG	2 cut(s)	895, 1181
BbsI	GAAGAC	3 cut(s)	54, 185, 2331
BccI	CCATC	9 cut(s)	216, 794, 878, 1073, 1352, 1751, 1991, 1997, 2414
BclI	TGATCA	1 cut(s)	2032
BcnI	CCSGG	3 cut(s)	83, 84, 1121
BcoDI	GTCTC	4 cut(s)	667, 1276, 1695, 2062
BfaI	CTAG	1 cut(s)	279
BfmI	CTRYAG	2 cut(s)	705, 2102
BfoI	RGCGCY	2 cut(s)	208, 352
BfuAI	ACCTGC	2 cut(s)	100, 2114
BmcAI	AGTACT	1 cut(s)	700
Bme1390I	CCNGG	3 cut(s)	83, 84, 1121
Bme18I	GGWCC	2 cut(s)	1547, 1768
BmeT110I	CYCGRG	3 cut(s)	82, 1220, 1505
BmgT120I	GGNCC	2 cut(s)	1547, 1768
BmiI	GGNNCC	7 cut(s)	183, 206, 384, 464, 1071, 1298, 1811
BmrFI	CCNGG	3 cut(s)	83, 84, 1121
BmrI	ACTGGG	3 cut(s)	305, 1728, 2402
BmsI	GCATC	8 cut(s)	104, 327, 1067, 1201, 1234, 1538, 1713, 2400
BmuI	ACTGGG	3 cut(s)	305, 1728, 2402
BpiI	GAAGAC	3 cut(s)	54, 185, 2331
BpuMI	CCSGG	3 cut(s)	83, 84, 1121
BsaAI	YACGTR	3 cut(s)	895, 1088, 1181
BsaHI	GRCGYC	1 cut(s)	205
BsaJI	CCNNGG	8 cut(s)	82, 83, 458, 554, 933, 1524, 1820, 2118
BsaWI	WCCGGW	1 cut(s)	839
Bsc4I	CCNNNNNNNGG	4 cut(s)	299, 1079, 1152, 1777
Bse1I	ACTGG	7 cut(s)	300, 386, 515, 1110, 1734, 1924, 2397
Bse3DI	GCAATG	3 cut(s)	433, 1050, 1974
BseDI	CCNNGG	8 cut(s)	82, 83, 458, 554, 933, 1524, 1820, 2118
BseGI	GGATG	4 cut(s)	805, 1912, 2002, 2415
BseLI	CCNNNNNNNGG	4 cut(s)	299, 1079, 1152, 1777
BseMI	GCAATG	3 cut(s)	433, 1050, 1974
BseMII	CTCAG	5 cut(s)	48, 678, 1089, 1702, 2139
BseNI	ACTGG	7 cut(s)	300, 386, 515, 1110, 1734, 1924, 2397
BseRI	GAGGAG	1 cut(s)	324
BseSI	GKGCMC	1 cut(s)	908
BseYI	CCCAGC	2 cut(s)	589, 1455
BsgI	GTGCAG	1 cut(s)	164
Bsh1285I	CGRYCG	1 cut(s)	840
BshFI	GGCC	1 cut(s)	1951
BshNI	GGYRCC	3 cut(s)	204, 1069, 1296
BsiEI	CGRYCG	1 cut(s)	840
BsiHKCI	CYCGRG	3 cut(s)	82, 1220, 1505
BsiSI	CCGG	3 cut(s)	83, 840, 1121
BslFI	GGGAC	2 cut(s)	521, 1225
BslI	CCNNNNNNNGG	4 cut(s)	299, 1079, 1152, 1777
BsmAI	GTCTC	4 cut(s)	667, 1276, 1695, 2062
BsmFI	GGGAC	2 cut(s)	521, 1225
BsmI	GAATGC	1 cut(s)	1192
BsnI	GGCC	1 cut(s)	1951
BsoBI	CYCGRG	3 cut(s)	82, 1220, 1505
Bsp1286I	GDGCHC	1 cut(s)	908
Bsp19I	CCATGG	3 cut(s)	1524, 1820, 2118
BspACI	CCGC	4 cut(s)	421, 1341, 2079, 2385
BspANI	GGCC	1 cut(s)	1951
BspCNI	CTCAG	5 cut(s)	49, 677, 1088, 1701, 2140
BspHI	TCATGA	1 cut(s)	1207
BspLI	GGNNCC	7 cut(s)	183, 206, 384, 464, 1071, 1298, 1811
BspMAI	CTGCAG	2 cut(s)	709, 2106
BspMI	ACCTGC	2 cut(s)	100, 2114
BspT107I	GGYRCC	3 cut(s)	204, 1069, 1296
BsrDI	GCAATG	3 cut(s)	433, 1050, 1974
BsrI	ACTGG	7 cut(s)	300, 386, 515, 1110, 1734, 1924, 2397
BssECI	CCNNGG	8 cut(s)	82, 83, 458, 554, 933, 1524, 1820, 2118
BssNAI	GTATAC	1 cut(s)	2289
BssNI	GRCGYC	1 cut(s)	205
BssT1I	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
Bst1107I	GTATAC	1 cut(s)	2289
Bst4CI	ACNGT	5 cut(s)	448, 992, 1069, 1093, 2234
Bst6I	CTCTTC	1 cut(s)	372
BstACI	GRCGYC	1 cut(s)	205
BstAPI	GCANNNNNTGC	4 cut(s)	814, 1052, 1202, 2339
BstBAI	YACGTR	3 cut(s)	895, 1088, 1181
BstC8I	GCNNGC	4 cut(s)	353, 806, 2106, 2248
BstDEI	CTNAG	7 cut(s)	57, 261, 664, 1075, 1688, 1881, 2148
BstDSI	CCRYGG	3 cut(s)	1524, 1820, 2118
BstENI	CCTNNNNNAGG	1 cut(s)	1150
BstF5I	GGATG	4 cut(s)	805, 1912, 2002, 2415
BstH2I	RGCGCY	2 cut(s)	208, 352
BstHHI	GCGC	3 cut(s)	207, 267, 351
BstMAI	GTCTC	4 cut(s)	667, 1276, 1695, 2062
BstMCI	CGRYCG	1 cut(s)	840
BstNSI	RCATGY	3 cut(s)	375, 958, 1621
BstSCI	CCNGG	3 cut(s)	81, 82, 1119
BstSFI	CTRYAG	2 cut(s)	705, 2102
BstSLI	GKGCMC	1 cut(s)	908
BstSNI	TACGTA	1 cut(s)	1088
BstV2I	GAAGAC	3 cut(s)	54, 185, 2331
BstX2I	RGATCY	4 cut(s)	382, 500, 1809, 2210
BstXI	CCANNNNNNTGG	2 cut(s)	561, 1805
BstYI	RGATCY	4 cut(s)	382, 500, 1809, 2210
BstZ17I	GTATAC	1 cut(s)	2289
BsuRI	GGCC	1 cut(s)	1951
BtgI	CCRYGG	3 cut(s)	1524, 1820, 2118
BtsCI	GGATG	4 cut(s)	805, 1912, 2002, 2415
BtsI	GCAGTG	1 cut(s)	2529
BtsIMutI	CAGTG	6 cut(s)	98, 293, 1103, 1917, 2239, 2529
BveI	ACCTGC	2 cut(s)	100, 2114
Cac8I	GCNNGC	4 cut(s)	353, 806, 2106, 2248
CaiI	CAGNNNCTG	1 cut(s)	1943
CciI	TCATGA	1 cut(s)	1207
CfoI	GCGC	3 cut(s)	207, 267, 351
Cfr13I	GGNCC	2 cut(s)	1547, 1768
Cfr9I	CCCGGG	1 cut(s)	82
Csp6I	GTAC	7 cut(s)	290, 449, 699, 1070, 1085, 1089, 1297
CviQI	GTAC	7 cut(s)	290, 449, 699, 1070, 1085, 1089, 1297
DdeI	CTNAG	7 cut(s)	57, 261, 664, 1075, 1688, 1881, 2148
DinI	GGCGCC	1 cut(s)	206
DraIII	CACNNNGTG	2 cut(s)	299, 2339
Eam1104I	CTCTTC	1 cut(s)	372
EarI	CTCTTC	1 cut(s)	372
Eco105I	TACGTA	1 cut(s)	1088
Eco130I	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
Eco32I	GATATC	2 cut(s)	139, 921
Eco47I	GGWCC	2 cut(s)	1547, 1768
Eco47III	AGCGCT	1 cut(s)	350
Eco57I	CTGAAG	5 cut(s)	474, 1005, 1544, 2097, 2583
Eco72I	CACGTG	2 cut(s)	895, 1181
Eco88I	CYCGRG	3 cut(s)	82, 1220, 1505
EcoNI	CCTNNNNNAGG	1 cut(s)	1150
EcoRV	GATATC	2 cut(s)	139, 921
EcoT14I	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
EgeI	GGCGCC	1 cut(s)	206
EheI	GGCGCC	1 cut(s)	206
ErhI	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
FalI	AAGNNNNNCTT	4 cut(s)	2496, 2528, 2556, 2588
FaqI	GGGAC	2 cut(s)	521, 1225
FauI	CCCGC	2 cut(s)	428, 2378
FauNDI	CATATG	1 cut(s)	2476
FbaI	TGATCA	1 cut(s)	2032
FblI	GTMKAC	1 cut(s)	2288
FokI	GGATG	4 cut(s)	812, 1919, 2009, 2422
FspBI	CTAG	1 cut(s)	279
GlaI	GCGC	3 cut(s)	206, 266, 350
GsaI	CCCAGC	2 cut(s)	593, 1459
HaeII	RGCGCY	2 cut(s)	208, 352
HaeIII	GGCC	1 cut(s)	1951
HapII	CCGG	3 cut(s)	83, 840, 1121
HhaI	GCGC	3 cut(s)	207, 267, 351
Hin1I	GRCGYC	1 cut(s)	205
Hin6I	GCGC	3 cut(s)	205, 265, 349
HinP1I	GCGC	3 cut(s)	205, 265, 349
HincII	GTYRAC	5 cut(s)	79, 770, 1477, 2404, 2431
HindII	GTYRAC	5 cut(s)	79, 770, 1477, 2404, 2431
HinfI	GANTC	9 cut(s)	59, 239, 929, 1238, 1448, 1744, 1876, 2541, 2577
HpaI	GTTAAC	1 cut(s)	2404
HpaII	CCGG	3 cut(s)	83, 840, 1121
HpyCH4III	ACNGT	5 cut(s)	448, 992, 1069, 1093, 2234
HpyCH4IV	ACGT	5 cut(s)	857, 894, 1087, 1180, 2039
HpyF3I	CTNAG	7 cut(s)	57, 261, 664, 1075, 1688, 1881, 2148
HpySE526I	ACGT	5 cut(s)	857, 894, 1087, 1180, 2039
Hsp92I	GRCGYC	1 cut(s)	205
HspAI	GCGC	3 cut(s)	205, 265, 349
KasI	GGCGCC	1 cut(s)	204
KpnI	GGTACC	2 cut(s)	1073, 1300
Ksp22I	TGATCA	1 cut(s)	2032
KspAI	GTTAAC	1 cut(s)	2404
LmnI	GCTCC	2 cut(s)	187, 1787
LweI	GCATC	8 cut(s)	104, 327, 1067, 1201, 1234, 1538, 1713, 2400
MaeI	CTAG	1 cut(s)	279
MaeII	ACGT	5 cut(s)	857, 894, 1087, 1180, 2039
MaeIII	GTNAC	8 cut(s)	5, 926, 1063, 1093, 1157, 1303, 2135, 2470
MfeI	CAATTG	3 cut(s)	186, 1231, 2270
MflI	RGATCY	4 cut(s)	382, 500, 1809, 2210
MhlI	GDGCHC	1 cut(s)	908
Mly113I	GGCGCC	1 cut(s)	205
MlyI	GAGTC	6 cut(s)	68, 248, 923, 1247, 1753, 2571
MmeI	TCCRAC	1 cut(s)	724
MroXI	GAANNNNTTC	1 cut(s)	171
MseI	TTAA	6 cut(s)	777, 996, 1332, 2372, 2403, 2526
MslI	CAYNNNNRTG	4 cut(s)	103, 831, 1108, 1523
MspA1I	CMGCKG	3 cut(s)	1004, 1193, 2552
MspI	CCGG	3 cut(s)	83, 840, 1121
MspR9I	CCNGG	3 cut(s)	83, 84, 1121
MunI	CAATTG	3 cut(s)	186, 1231, 2270
Mva1269I	GAATGC	1 cut(s)	1192
NarI	GGCGCC	1 cut(s)	205
NciI	CCSGG	3 cut(s)	83, 84, 1121
NcoI	CCATGG	3 cut(s)	1524, 1820, 2118
NdeI	CATATG	1 cut(s)	2476
NlaIV	GGNNCC	7 cut(s)	183, 206, 384, 464, 1071, 1298, 1811
NmuCI	GTSAC	5 cut(s)	5, 926, 1063, 2135, 2470
NspI	RCATGY	3 cut(s)	375, 958, 1621
OliI	CACNNNNGTG	2 cut(s)	103, 831
PaeR7I	CTCGAG	2 cut(s)	1220, 1505
PagI	TCATGA	1 cut(s)	1207
PaqCI	CACCTGC	1 cut(s)	2114
PciI	ACATGT	3 cut(s)	371, 954, 1617
PctI	GAATGC	1 cut(s)	1192
PdmI	GAANNNNTTC	1 cut(s)	171
PfeI	GAWTC	3 cut(s)	1448, 1876, 2541
PflMI	CCANNNNNTGG	1 cut(s)	299
PleI	GAGTC	6 cut(s)	67, 247, 923, 1246, 1752, 2571
PluTI	GGCGCC	1 cut(s)	208
PmaCI	CACGTG	2 cut(s)	895, 1181
PmlI	CACGTG	2 cut(s)	895, 1181
PpsI	GAGTC	6 cut(s)	67, 247, 923, 1246, 1752, 2571
Ppu21I	YACGTR	3 cut(s)	895, 1088, 1181
PscI	ACATGT	3 cut(s)	371, 954, 1617
PsiI	TTATAA	2 cut(s)	1842, 2364
PspCI	CACGTG	2 cut(s)	895, 1181
PspFI	CCCAGC	2 cut(s)	589, 1455
PspN4I	GGNNCC	7 cut(s)	183, 206, 384, 464, 1071, 1298, 1811
PspPI	GGNCC	2 cut(s)	1547, 1768
PspXI	VCTCGAGB	1 cut(s)	1505
PsrI	GAACNNNNNNTAC	2 cut(s)	1677, 1709
PstI	CTGCAG	2 cut(s)	709, 2106
PstNI	CAGNNNCTG	1 cut(s)	1943
PsuI	RGATCY	4 cut(s)	382, 500, 1809, 2210
PvuII	CAGCTG	3 cut(s)	1004, 1193, 2552
RsaI	GTAC	7 cut(s)	291, 450, 700, 1071, 1086, 1090, 1298
RsaNI	GTAC	7 cut(s)	290, 449, 699, 1070, 1085, 1089, 1297
RseI	CAYNNNNRTG	4 cut(s)	103, 831, 1108, 1523
SaqAI	TTAA	6 cut(s)	777, 996, 1332, 2372, 2403, 2526
Sau96I	GGNCC	2 cut(s)	1547, 1768
ScaI	AGTACT	1 cut(s)	700
SchI	GAGTC	6 cut(s)	68, 248, 923, 1247, 1753, 2571
ScrFI	CCNGG	3 cut(s)	83, 84, 1121
SduI	GDGCHC	1 cut(s)	908
SfaNI	GCATC	8 cut(s)	104, 327, 1067, 1201, 1234, 1538, 1713, 2400
SfcI	CTRYAG	2 cut(s)	705, 2102
SfoI	GGCGCC	1 cut(s)	206
Sfr274I	CTCGAG	2 cut(s)	1220, 1505
SinI	GGWCC	2 cut(s)	1547, 1768
SlaI	CTCGAG	2 cut(s)	1220, 1505
SmaI	CCCGGG	1 cut(s)	84
SmiMI	CAYNNNNRTG	4 cut(s)	103, 831, 1108, 1523
SmlI	CTYRAG	2 cut(s)	1220, 1505
SmoI	CTYRAG	2 cut(s)	1220, 1505
SnaBI	TACGTA	1 cut(s)	1088
SsiI	CCGC	4 cut(s)	421, 1341, 2079, 2385
SspDI	GGCGCC	1 cut(s)	204
SspI	AATATT	1 cut(s)	1201
SspMI	CTAG	1 cut(s)	279
StyD4I	CCNGG	3 cut(s)	81, 82, 1119
StyI	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
TaaI	ACNGT	5 cut(s)	448, 992, 1069, 1093, 2234
TaiI	ACGT	5 cut(s)	860, 897, 1090, 1183, 2042
TaqI	TCGA	5 cut(s)	65, 271, 1221, 1248, 1506
TaqII	GACCGA	1 cut(s)	1756
TatI	WGTACW	2 cut(s)	448, 698
TauI	GCSGC	1 cut(s)	1344
TfiI	GAWTC	3 cut(s)	1448, 1876, 2541
Tru1I	TTAA	6 cut(s)	777, 996, 1332, 2372, 2403, 2526
Tru9I	TTAA	6 cut(s)	777, 996, 1332, 2372, 2403, 2526
TscAI	CASTG	6 cut(s)	105, 300, 1110, 1924, 2239, 2536
TseFI	GTSAC	5 cut(s)	5, 926, 1063, 2135, 2470
Tsp45I	GTSAC	5 cut(s)	5, 926, 1063, 2135, 2470
TspDTI	ATGAA	6 cut(s)	164, 1647, 2034, 2208, 2337, 2517
TspGWI	ACGGA	1 cut(s)	1871
TspMI	CCCGGG	1 cut(s)	82
TspRI	CASTG	6 cut(s)	105, 300, 1110, 1924, 2239, 2536
Van91I	CCANNNNNTGG	1 cut(s)	299
VpaK11BI	GGWCC	2 cut(s)	1547, 1768
XagI	CCTNNNNNAGG	1 cut(s)	1150
XapI	RAATTY	8 cut(s)	514, 615, 736, 759, 1166, 1512, 1534, 1762
XceI	RCATGY	3 cut(s)	375, 958, 1621
XhoI	CTCGAG	2 cut(s)	1220, 1505
XmaI	CCCGGG	1 cut(s)	82
XmiI	GTMKAC	1 cut(s)	2288
XmnI	GAANNNNTTC	1 cut(s)	171
XspI	CTAG	1 cut(s)	279
ZrmI	AGTACT	1 cut(s)	700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.