Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005632

Physical Location & Seq

Genomic Coordinates Forward (+)

2378090 .. 2388319

Gene Structure 10230 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000000592

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2934 bp

ATGTGTATCATGCGAAAGGTTCTAGTCAATGGTCGTATATATATGGCAGCCGACAGGCAATTCTATGATTGTCAGTCAGGAAATATGGGTGACAAGGAGATATTGGAGAATGGGTTCGCTGAAAGAGATGACCAACATTCTGAGTCTTCAATTGGCAAGGTTGACCCCGGGAAACCTGCATCACTGACGTGGCAGCGAAAATTAAACAGCAAGGGAAATGATATCGTGCAGTTCAATCTAACTTTGAAAGAAGTTATTCATTTGGCTCCAATTGGTCTTCGTCTATGGCGCCATCTACGAGAAGAAGCTGCTAAAGGAAGGGAGGCTATGATTGATCCATTTACCAAGCGCAGTCGATCATCTAGTCATGCTGTACCACTGGGTGGTATTGGTGGAGGAAGCATCGGAAGAAGTATAAGAGGTGAGTTTCAGCGTTGGCAGCTACTCCCCAGAACATGTGAAGAGGATCCAGTTTTAGCAGATCAATTTTCTGTATTTGTTTCCCGCAGCAATGGTGAAAAGTATTCTACTGTACTCTGTCCGAGGAACCCGGAGGTCAAAGGAAACAACGCTTCAGGTATTGGATCTTGGGACTGGAATTTGAAAGGGGATAAATCTACCTATCATGCCCTTTTCCCAAGGGCTTGGTCTGTTTATGAGGGTGAACCTGACCCAGCACTCAAAATAGTCTGTCGACAAATTTCACCTATTATTCCCCATAATTACAAGGAGAGCAGCTTCCCTGTCTCAGTTTTTACTTTCACTCTATATAATTCCGGGAGTACTGCTGCAGATACCACTTTGCTTTTCACATGGGCAAATTCTATTGGAGGGATTTCTGAATTTTCTGGTCAACACTTTAATTCAAGAGCAGAGGTGAAGGATGGCGTGCATAGTGTACTTCTACATCACAAGAGTGCGACCGGAAAATCCCCATTGACGTTTGCAATAGCAGCAGAGCAGACTGATGGTGTTCACTTGTCAGAGTGCCCTTGCTTTGTGATATCTGGTGACTCCAAGGGTATTAGTGCTAAAGACATGTGGAATGAGATAAAACAGCATGGATCGTTTGACGGTCTTAATTCAGCTGAAACATCATTACCTTCAGAACAAGGATCGTCTATTGGGGCAGCCATTGCTGCATCTGTGACAGTGCCATCAGATGGAGTACGTACTGTAACATTTTCACTGGCATGGGATTGCCCTGAAATAATTATGGATGGAAAGACCTATTACAGGCGTTACACTAAATTCTATGGCACACGTGGGAATGCAGCTGCAAATATTGCTCATGATGCTATTCTCGAGCATCACAATTGGGAGTCCCAAGTCGAAGCATGGCAAAGACCAATTCTTGAAGATAAGAGACTTCCTGAATGGTACCCTGTTACTCTGTTCAATGAGCTATATTATCTTAATTCTGGCGGCACAATTTGGACAGATGGATCACCTCCTGTGCATAGTTTAGCAAGTATTGGAGGAAGGAAGTTTTCCCTTGATAAGTCCTCATTAGGTTTGAAAAACATCATTGATTCACCCCAGCAAAATGATACTGCTGTTGACATTCTTGGAAGAATGACTACAATACTCGAGCAAATTCACACGCCCATGGCATCAAATTCTGCATTTGGACCAAATCTACTTCAGGAGGGAGAAGAAAACATTGGTCAATTCCTTTATCTTGAAGGAGTTGAATATCACATGTGGAACACTTATGATGTCCATTTTTACTCATCTTTTTCATTGGTCATGCTATTTCCAAAACTTGAACTCAGCATACAAAGAGACTTTGCAGCAGCAGTAATGATGCACGACCCCAGTAAGATGAGTCTTTTATGTGATGGAAGGTCGGTCCAAAGAAAGGTTCTTGGAGCTGTTCCCCATGATATTGGGATCCATGATCCATGGTTTGAAGTAAATGCTTATAATCTTTACAATACGGATAGGTGGAAAGACTTGAATCCTAAGTTTGTTCTCCAAGTTTACAGGGATGTGGTTGCCACTGGTGATAAGAAGTTTGCAGAAGCTGTTTGGCCTTCTGTTTATGTTGCAATGGCTTATATGGAACAATTTGACAGGGATGGTGATGGTATGATTGAGAATGAAGGCTTCCCTGATCAAACGTATGATACATGGTCTGTCTCTGGTGTGAGTGCATATAGCGGTGGATTGTGGTTAGCAGCTCTGCAGGCTGCTTCAGCCATGGCAGGTGAAGTAGGTGACAAGGGTTCTGAGGATTATTTTTGGTGCAAGTTTCAGAAGGCAAAAGCGGTGTATGAAAAATTATGGAATGGATCTTACTTCAATTATGATAACAGTGGTCAAAGTGCAAGCTCATCAATTCAAGCAGATCAATTGGCTGGACAATGGTATGCCAGAGCGTGTGGACTTTTGCCAATCGTTGATGAAGACAAGGCACAAAGTGCATTGGAAAAGATTTATACGTATAATGTCTTAAAGGTGAAGGGTGGGAAACTGGGGGCTATTAATGGGATGCTTCCTGATGGAAAGGTTGACATGACTTCAATGCAGTCAAGAGAAATATGGTCAGGGGTCACATATGCTGTTGCTGCAACAATGATACATGAAGATATGCTTGATATGGCATTTAACACTGCTGGTGGAATCTATGCAGCTGCTTGGTCTGAAGAAGGTCTTGGATACTCTTTTCAGACCCCAGAAGCTTGGAACACCAATGAGGAATTCAGATCATTAGTTTACATGCGCCCTCTGGCCATATGGGCAATGCAGTGGGCATTATCAAGACCGAAGGTTCTTAAGCAGGAGACGAGATCAGAAGTAGATCAAGTTTCTTTGCTCCGGCATGAGGCTGGATTCGCAAGAGTTGCTCAGCTTTTAAAGTTGCCGAAAGAGGAAGCATCAAGAAGCATTTTACAGGTTGTTTATGATTATACTTGCAGGAGGATGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004348 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005790 GO:0005886 GO:0006082 GO:0006629 GO:0006643 GO:0006664 GO:0006665 GO:0006687 GO:0006807 GO:0007275 GO:0007399 GO:0007417 GO:0008150 GO:0008152 GO:0008202 GO:0008206 GO:0008422 GO:0009056 GO:0009987 GO:0012505 GO:0015926 GO:0016020 GO:0016021 GO:0016137 GO:0016139 GO:0016787 GO:0016798 GO:0019752 GO:0021953 GO:0021954 GO:0022008 GO:0030154 GO:0030182 GO:0031224 GO:0032501 GO:0032502 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0048468 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0071704 GO:0071944 GO:1901135 GO:1901136 GO:1901360 GO:1901564 GO:1901575 GO:1901615 GO:1901657 GO:1901658 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00511 ko00600 ko01100 map00511 map00600 map01100

Pfam Domains

Protein Families

DUF608 Glyco_hydr_116N

Protein Analysis

978

Amino Acids

108.91

Weight (kDa)

5.7

Isoelectric Point (pI)

42.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydr_116N	PF12215	124 - 440	4.7e-108	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term
DUF608	PF04685	556 - 916	4.4e-165	Glycosyl-hydrolase family 116, catalytic region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49900 AT5G49900 AT5G49900
fragaria_vesca	FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140
malus_domestica	MD08G1245400.v1.1 MD15G1440400.v1.1
prunus_persica	Prupe.1G582500_v2.0.a1 Prupe.1G582500_v2.0.a1
pyrus_communis	pycom08g21280 pycom15g38820
rosa_chinensis	RchiOBHm_Chr7g0241141
rosa_laevigata	RLG00000000592
rosa_multiflora	Rmu_sc0006665.1_g000004
rosa_roxburghii	Rroxscaffold_3G00219230
rosa_rugosa	Rorug07G0343100 Rorug07G0343200 Rorug07G0343300 Rorug07G0343400.1 Rorug07G0343500.1
rosa_samantha	Rh7AG498100 Rh7BG468700 Rh7CG514800 Rh7DG482200
rosa_wichuraiana	Rw7G042010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1926
AarI	CACCTGC	1 cut(s)	2198
Acc36I	ACCTGC	2 cut(s)	184, 2198
Acc65I	GGTACC	1 cut(s)	1380
AccB1I	GGYRCC	2 cut(s)	288, 1380
AccB7I	CCANNNNNTGG	2 cut(s)	383, 1163
AccI	GTMKAC	1 cut(s)	694
AciI	CCGC	4 cut(s)	505, 1425, 2163, 2270
AcoI	YGGCCR	1 cut(s)	2733
AcsI	RAATTY	8 cut(s)	598, 699, 820, 842, 1250, 1596, 1618, 2702
AcuI	CTGAAG	5 cut(s)	558, 1089, 1628, 2181, 2667
AcvI	CACGTG	1 cut(s)	1265
AcyI	GRCGYC	1 cut(s)	289
AdeI	CACNNNGTG	2 cut(s)	383, 2423
AfaI	GTAC	7 cut(s)	375, 534, 784, 900, 1170, 1174, 1382
AfiI	CCNNNNNNNGG	5 cut(s)	383, 1163, 1236, 1861, 2827
AflII	CTTAAG	1 cut(s)	2777
AflIII	ACRYGT	4 cut(s)	455, 1038, 1262, 1701
AjiI	CACGTC	1 cut(s)	189
AjuI	GAANNNNNNNTTGG	8 cut(s)	1647, 1679, 1848, 1880, 2640, 2672, 2687, 2719
AleI	CACNNNNGTG	2 cut(s)	187, 915
AloI	GAACNNNNNNTCC	2 cut(s)	98, 130
Alw26I	GTCTC	5 cut(s)	751, 1360, 1779, 2146, 2780
AlwNI	CAGNNNCTG	1 cut(s)	2027
Ama87I	CYCGRG	3 cut(s)	167, 1304, 1589
AoxI	GGCC	2 cut(s)	2033, 2733
ApoI	RAATTY	8 cut(s)	598, 699, 820, 842, 1250, 1596, 1618, 2702
AseI	ATTAAT	1 cut(s)	2487
Asp700I	GAANNNNTTC	2 cut(s)	113, 255
Asp718I	GGTACC	1 cut(s)	1380
AspLEI	GCGC	3 cut(s)	291, 351, 2727
AspS9I	GGNCC	2 cut(s)	1631, 1852
AsuC2I	CCSGG	4 cut(s)	168, 169, 551, 778
AvaI	CYCGRG	3 cut(s)	167, 1304, 1589
AvaII	GGWCC	2 cut(s)	1631, 1852
BaeGI	GKGCMC	1 cut(s)	992
BaeI	ACNNNNGTAYC	2 cut(s)	1542, 1575
BalI	TGGCCA	1 cut(s)	2735
BamHI	GGATCC	2 cut(s)	466, 1893
BanI	GGYRCC	2 cut(s)	288, 1380
BarI	GAAGNNNNNNTAC	2 cut(s)	1564, 1596
BbrPI	CACGTG	1 cut(s)	1265
BbsI	GAAGAC	3 cut(s)	138, 269, 2415
BciVI	GTATCC	1 cut(s)	2654
BclI	TGATCA	1 cut(s)	2116
BcnI	CCSGG	4 cut(s)	168, 169, 551, 778
BcoDI	GTCTC	5 cut(s)	751, 1360, 1779, 2146, 2780
BfaI	CTAG	2 cut(s)	23, 363
BfmI	CTRYAG	2 cut(s)	789, 2186
BfoI	RGCGCY	1 cut(s)	292
BfrI	CTTAAG	1 cut(s)	2777
BfuAI	ACCTGC	2 cut(s)	184, 2198
BfuI	GTATCC	1 cut(s)	2654
BglI	GCCNNNNNGGC	1 cut(s)	2741
BlpI	GCTNAGC	1 cut(s)	2850
BmcAI	AGTACT	1 cut(s)	784
Bme1390I	CCNGG	4 cut(s)	168, 169, 551, 778
Bme18I	GGWCC	2 cut(s)	1631, 1852
BmeT110I	CYCGRG	3 cut(s)	167, 1304, 1589
BmgBI	CACGTC	1 cut(s)	189
BmgT120I	GGNCC	2 cut(s)	1631, 1852
BmiI	GGNNCC	6 cut(s)	267, 290, 468, 548, 1382, 1895
BmrFI	CCNGG	4 cut(s)	168, 169, 551, 778
BmrI	ACTGGG	3 cut(s)	389, 1812, 2486
BmsI	GCATC	9 cut(s)	188, 411, 1151, 1285, 1318, 1622, 1797, 2484, 2888
BmuI	ACTGGG	3 cut(s)	389, 1812, 2486
BpiI	GAAGAC	3 cut(s)	138, 269, 2415
Bpu1102I	GCTNAGC	1 cut(s)	2850
BpuMI	CCSGG	4 cut(s)	168, 169, 551, 778
BsaAI	YACGTR	3 cut(s)	1172, 1265, 2445
BsaHI	GRCGYC	1 cut(s)	289
BsaJI	CCNNGG	8 cut(s)	166, 167, 542, 638, 1017, 1608, 1904, 2202
BsaWI	WCCGGW	1 cut(s)	923
BsaXI	ACNNNNNCTCC	2 cut(s)	98, 128
Bsc4I	CCNNNNNNNGG	5 cut(s)	383, 1163, 1236, 1861, 2827
Bse1I	ACTGG	7 cut(s)	384, 470, 599, 1194, 1818, 2008, 2481
Bse3DI	GCAATG	4 cut(s)	517, 1134, 2058, 2751
BseDI	CCNNGG	8 cut(s)	166, 167, 542, 638, 1017, 1608, 1904, 2202
BseGI	GGATG	6 cut(s)	889, 1225, 1996, 2086, 2499, 2931
BseLI	CCNNNNNNNGG	5 cut(s)	383, 1163, 1236, 1861, 2827
BseMI	GCAATG	4 cut(s)	517, 1134, 2058, 2751
BseMII	CTCAG	5 cut(s)	132, 762, 1786, 2223, 2864
BseNI	ACTGG	7 cut(s)	384, 470, 599, 1194, 1818, 2008, 2481
BseSI	GKGCMC	1 cut(s)	992
BseYI	CCCAGC	2 cut(s)	673, 1539
BsgI	GTGCAG	1 cut(s)	248
Bsh1285I	CGRYCG	1 cut(s)	924
BshFI	GGCC	2 cut(s)	2035, 2735
BshNI	GGYRCC	2 cut(s)	288, 1380
BsiEI	CGRYCG	1 cut(s)	924
BsiHKCI	CYCGRG	3 cut(s)	167, 1304, 1589
BsiSI	CCGG	5 cut(s)	168, 551, 777, 924, 2821
BslFI	GGGAC	2 cut(s)	605, 1309
BslI	CCNNNNNNNGG	5 cut(s)	383, 1163, 1236, 1861, 2827
BsmAI	GTCTC	5 cut(s)	751, 1360, 1779, 2146, 2780
BsmBI	CGTCTC	1 cut(s)	2780
BsmFI	GGGAC	2 cut(s)	605, 1309
BsmI	GAATGC	1 cut(s)	1276
BsnI	GGCC	2 cut(s)	2035, 2735
BsoBI	CYCGRG	3 cut(s)	167, 1304, 1589
Bsp1286I	GDGCHC	1 cut(s)	992
Bsp1720I	GCTNAGC	1 cut(s)	2850
Bsp19I	CCATGG	3 cut(s)	1608, 1904, 2202
BspACI	CCGC	4 cut(s)	505, 1425, 2163, 2270
BspANI	GGCC	2 cut(s)	2035, 2735
BspCNI	CTCAG	5 cut(s)	133, 761, 1785, 2224, 2863
BspHI	TCATGA	1 cut(s)	1291
BspLI	GGNNCC	6 cut(s)	267, 290, 468, 548, 1382, 1895
BspMAI	CTGCAG	2 cut(s)	793, 2190
BspMI	ACCTGC	2 cut(s)	184, 2198
BspT107I	GGYRCC	2 cut(s)	288, 1380
BspTI	CTTAAG	1 cut(s)	2777
BsrDI	GCAATG	4 cut(s)	517, 1134, 2058, 2751
BsrI	ACTGG	7 cut(s)	384, 470, 599, 1194, 1818, 2008, 2481
BssECI	CCNNGG	8 cut(s)	166, 167, 542, 638, 1017, 1608, 1904, 2202
BssNI	GRCGYC	1 cut(s)	289
BssT1I	CCWWGG	5 cut(s)	638, 1017, 1608, 1904, 2202
Bst4CI	ACNGT	5 cut(s)	532, 1076, 1153, 1177, 2318
Bst6I	CTCTTC	1 cut(s)	456
BstACI	GRCGYC	1 cut(s)	289
BstAFI	CTTAAG	1 cut(s)	2777
BstAPI	GCANNNNNTGC	4 cut(s)	1136, 1286, 2423, 2846
BstBAI	YACGTR	3 cut(s)	1172, 1265, 2445
BstC8I	GCNNGC	3 cut(s)	890, 2190, 2332
BstDEI	CTNAG	6 cut(s)	141, 748, 1772, 1965, 2232, 2850
BstDSI	CCRYGG	3 cut(s)	1608, 1904, 2202
BstENI	CCTNNNNNAGG	1 cut(s)	1234
BstF5I	GGATG	6 cut(s)	889, 1225, 1996, 2086, 2499, 2931
BstH2I	RGCGCY	1 cut(s)	292
BstHHI	GCGC	3 cut(s)	291, 351, 2727
BstMAI	GTCTC	5 cut(s)	751, 1360, 1779, 2146, 2780
BstMCI	CGRYCG	1 cut(s)	924
BstNSI	RCATGY	4 cut(s)	459, 1042, 1705, 2725
BstSCI	CCNGG	4 cut(s)	166, 167, 549, 776
BstSFI	CTRYAG	2 cut(s)	789, 2186
BstSLI	GKGCMC	1 cut(s)	992
BstSNI	TACGTA	2 cut(s)	1172, 2445
BstV2I	GAAGAC	3 cut(s)	138, 269, 2415
BstX2I	RGATCY	4 cut(s)	466, 584, 1893, 2294
BstXI	CCANNNNNNTGG	3 cut(s)	645, 1889, 2685
BstYI	RGATCY	4 cut(s)	466, 584, 1893, 2294
BsuI	GTATCC	1 cut(s)	2654
BsuRI	GGCC	2 cut(s)	2035, 2735
BtgI	CCRYGG	3 cut(s)	1608, 1904, 2202
BtrI	CACGTC	1 cut(s)	189
BtsCI	GGATG	6 cut(s)	889, 1225, 1996, 2086, 2499, 2931
BtsI	GCAGTG	2 cut(s)	2613, 2756
BtsIMutI	CAGTG	8 cut(s)	182, 377, 1158, 1187, 2001, 2323, 2613, 2756
BveI	ACCTGC	2 cut(s)	184, 2198
Cac8I	GCNNGC	3 cut(s)	890, 2190, 2332
CaiI	CAGNNNCTG	1 cut(s)	2027
CciI	TCATGA	1 cut(s)	1291
CfoI	GCGC	3 cut(s)	291, 351, 2727
Cfr13I	GGNCC	2 cut(s)	1631, 1852
Cfr9I	CCCGGG	1 cut(s)	167
Csp6I	GTAC	7 cut(s)	374, 533, 783, 899, 1169, 1173, 1381
CviQI	GTAC	7 cut(s)	374, 533, 783, 899, 1169, 1173, 1381
DdeI	CTNAG	6 cut(s)	141, 748, 1772, 1965, 2232, 2850
DinI	GGCGCC	1 cut(s)	290
DraI	TTTAAA	1 cut(s)	2859
DraIII	CACNNNGTG	2 cut(s)	383, 2423
EaeI	YGGCCR	1 cut(s)	2733
Eam1104I	CTCTTC	1 cut(s)	456
EarI	CTCTTC	1 cut(s)	456
Eco105I	TACGTA	2 cut(s)	1172, 2445
Eco130I	CCWWGG	5 cut(s)	638, 1017, 1608, 1904, 2202
Eco32I	GATATC	2 cut(s)	223, 1005
Eco47I	GGWCC	2 cut(s)	1631, 1852
Eco57I	CTGAAG	5 cut(s)	558, 1089, 1628, 2181, 2667
Eco72I	CACGTG	1 cut(s)	1265
Eco88I	CYCGRG	3 cut(s)	167, 1304, 1589
EcoNI	CCTNNNNNAGG	1 cut(s)	1234
EcoRI	GAATTC	1 cut(s)	2702
EcoRV	GATATC	2 cut(s)	223, 1005
EcoT14I	CCWWGG	5 cut(s)	638, 1017, 1608, 1904, 2202
EgeI	GGCGCC	1 cut(s)	290
EheI	GGCGCC	1 cut(s)	290
ErhI	CCWWGG	5 cut(s)	638, 1017, 1608, 1904, 2202
Esp3I	CGTCTC	1 cut(s)	2780
FalI	AAGNNNNNCTT	4 cut(s)	2580, 2612, 2640, 2672
FaqI	GGGAC	2 cut(s)	605, 1309
FauI	CCCGC	1 cut(s)	512
FauNDI	CATATG	2 cut(s)	2560, 2738
FbaI	TGATCA	1 cut(s)	2116
FblI	GTMKAC	1 cut(s)	694
FokI	GGATG	5 cut(s)	896, 1232, 2003, 2093, 2506
FspBI	CTAG	2 cut(s)	23, 363
GlaI	GCGC	3 cut(s)	290, 350, 2726
GsaI	CCCAGC	2 cut(s)	677, 1543
HaeII	RGCGCY	1 cut(s)	292
HaeIII	GGCC	2 cut(s)	2035, 2735
HapII	CCGG	5 cut(s)	168, 551, 777, 924, 2821
HhaI	GCGC	3 cut(s)	291, 351, 2727
Hin1I	GRCGYC	1 cut(s)	289
Hin6I	GCGC	3 cut(s)	289, 349, 2725
HinP1I	GCGC	3 cut(s)	289, 349, 2725
HincII	GTYRAC	5 cut(s)	163, 695, 854, 1561, 2515
HindII	GTYRAC	5 cut(s)	163, 695, 854, 1561, 2515
HindIII	AAGCTT	1 cut(s)	2682
HinfI	GANTC	8 cut(s)	143, 1013, 1322, 1532, 1828, 1960, 2625, 2835
HpaII	CCGG	5 cut(s)	168, 551, 777, 924, 2821
HpyCH4III	ACNGT	5 cut(s)	532, 1076, 1153, 1177, 2318
HpyCH4IV	ACGT	6 cut(s)	188, 941, 1171, 1264, 2123, 2444
HpyF3I	CTNAG	6 cut(s)	141, 748, 1772, 1965, 2232, 2850
HpySE526I	ACGT	6 cut(s)	188, 941, 1171, 1264, 2123, 2444
Hsp92I	GRCGYC	1 cut(s)	289
HspAI	GCGC	3 cut(s)	289, 349, 2725
KasI	GGCGCC	1 cut(s)	288
KpnI	GGTACC	1 cut(s)	1384
Ksp22I	TGATCA	1 cut(s)	2116
LmnI	GCTCC	3 cut(s)	271, 1871, 2823
LweI	GCATC	9 cut(s)	188, 411, 1151, 1285, 1318, 1622, 1797, 2484, 2888
MaeI	CTAG	2 cut(s)	23, 363
MaeII	ACGT	6 cut(s)	188, 941, 1171, 1264, 2123, 2444
MaeIII	GTNAC	8 cut(s)	89, 1010, 1147, 1177, 1241, 1387, 2219, 2554
MfeI	CAATTG	4 cut(s)	150, 270, 1315, 2354
MflI	RGATCY	4 cut(s)	466, 584, 1893, 2294
MhlI	GDGCHC	1 cut(s)	992
MlsI	TGGCCA	1 cut(s)	2735
MluNI	TGGCCA	1 cut(s)	2735
Mly113I	GGCGCC	1 cut(s)	289
MlyI	GAGTC	4 cut(s)	152, 1007, 1331, 1837
Mox20I	TGGCCA	1 cut(s)	2735
MroXI	GAANNNNTTC	2 cut(s)	113, 255
MscI	TGGCCA	1 cut(s)	2735
MseI	TTAA	9 cut(s)	203, 861, 1080, 1416, 2456, 2487, 2610, 2778, 2858
MslI	CAYNNNNRTG	4 cut(s)	187, 915, 1192, 1607
Msp20I	TGGCCA	1 cut(s)	2735
MspA1I	CMGCKG	3 cut(s)	1088, 1277, 2636
MspCI	CTTAAG	1 cut(s)	2777
MspI	CCGG	5 cut(s)	168, 551, 777, 924, 2821
MspR9I	CCNGG	4 cut(s)	168, 169, 551, 778
MunI	CAATTG	4 cut(s)	150, 270, 1315, 2354
Mva1269I	GAATGC	1 cut(s)	1276
NarI	GGCGCC	1 cut(s)	289
NciI	CCSGG	4 cut(s)	168, 169, 551, 778
NcoI	CCATGG	3 cut(s)	1608, 1904, 2202
NdeI	CATATG	2 cut(s)	2560, 2738
NlaIV	GGNNCC	6 cut(s)	267, 290, 468, 548, 1382, 1895
NmuCI	GTSAC	5 cut(s)	89, 1010, 1147, 2219, 2554
NspI	RCATGY	4 cut(s)	459, 1042, 1705, 2725
OliI	CACNNNNGTG	2 cut(s)	187, 915
PaeR7I	CTCGAG	2 cut(s)	1304, 1589
PagI	TCATGA	1 cut(s)	1291
PaqCI	CACCTGC	1 cut(s)	2198
PciI	ACATGT	3 cut(s)	455, 1038, 1701
PctI	GAATGC	1 cut(s)	1276
PdmI	GAANNNNTTC	2 cut(s)	113, 255
PfeI	GAWTC	4 cut(s)	1532, 1960, 2625, 2835
PflMI	CCANNNNNTGG	2 cut(s)	383, 1163
PfoI	TCCNGGA	1 cut(s)	776
PleI	GAGTC	4 cut(s)	151, 1007, 1330, 1836
PluTI	GGCGCC	1 cut(s)	292
PmaCI	CACGTG	1 cut(s)	1265
PmlI	CACGTG	1 cut(s)	1265
PpsI	GAGTC	4 cut(s)	151, 1007, 1330, 1836
Ppu21I	YACGTR	3 cut(s)	1172, 1265, 2445
PscI	ACATGT	3 cut(s)	455, 1038, 1701
PshBI	ATTAAT	1 cut(s)	2487
PsiI	TTATAA	1 cut(s)	1926
PspCI	CACGTG	1 cut(s)	1265
PspFI	CCCAGC	2 cut(s)	673, 1539
PspN4I	GGNNCC	6 cut(s)	267, 290, 468, 548, 1382, 1895
PspPI	GGNCC	2 cut(s)	1631, 1852
PspXI	VCTCGAGB	1 cut(s)	1589
PsrI	GAACNNNNNNTAC	2 cut(s)	1761, 1793
PstI	CTGCAG	2 cut(s)	793, 2190
PstNI	CAGNNNCTG	1 cut(s)	2027
PsuI	RGATCY	4 cut(s)	466, 584, 1893, 2294
PvuII	CAGCTG	3 cut(s)	1088, 1277, 2636
RsaI	GTAC	7 cut(s)	375, 534, 784, 900, 1170, 1174, 1382
RsaNI	GTAC	7 cut(s)	374, 533, 783, 899, 1169, 1173, 1381
RseI	CAYNNNNRTG	4 cut(s)	187, 915, 1192, 1607
SalI	GTCGAC	1 cut(s)	693
SaqAI	TTAA	9 cut(s)	203, 861, 1080, 1416, 2456, 2487, 2610, 2778, 2858
Sau96I	GGNCC	2 cut(s)	1631, 1852
ScaI	AGTACT	1 cut(s)	784
SchI	GAGTC	4 cut(s)	152, 1007, 1331, 1837
ScrFI	CCNGG	4 cut(s)	168, 169, 551, 778
SduI	GDGCHC	1 cut(s)	992
SfaNI	GCATC	9 cut(s)	188, 411, 1151, 1285, 1318, 1622, 1797, 2484, 2888
SfcI	CTRYAG	2 cut(s)	789, 2186
SfoI	GGCGCC	1 cut(s)	290
Sfr274I	CTCGAG	2 cut(s)	1304, 1589
SinI	GGWCC	2 cut(s)	1631, 1852
SlaI	CTCGAG	2 cut(s)	1304, 1589
SmaI	CCCGGG	1 cut(s)	169
SmiMI	CAYNNNNRTG	4 cut(s)	187, 915, 1192, 1607
SmlI	CTYRAG	3 cut(s)	1304, 1589, 2777
SmoI	CTYRAG	3 cut(s)	1304, 1589, 2777
SnaBI	TACGTA	2 cut(s)	1172, 2445
SsiI	CCGC	4 cut(s)	505, 1425, 2163, 2270
SspDI	GGCGCC	1 cut(s)	288
SspI	AATATT	1 cut(s)	1285
SspMI	CTAG	2 cut(s)	23, 363
StyD4I	CCNGG	4 cut(s)	166, 167, 549, 776
StyI	CCWWGG	5 cut(s)	638, 1017, 1608, 1904, 2202
TaaI	ACNGT	5 cut(s)	532, 1076, 1153, 1177, 2318
TaiI	ACGT	6 cut(s)	191, 944, 1174, 1267, 2126, 2447
TaqI	TCGA	5 cut(s)	355, 694, 1305, 1332, 1590
TaqII	GACCGA	2 cut(s)	1840, 2782
TatI	WGTACW	3 cut(s)	532, 782, 898
TauI	GCSGC	1 cut(s)	1428
TfiI	GAWTC	4 cut(s)	1532, 1960, 2625, 2835
Tru1I	TTAA	9 cut(s)	203, 861, 1080, 1416, 2456, 2487, 2610, 2778, 2858
Tru9I	TTAA	9 cut(s)	203, 861, 1080, 1416, 2456, 2487, 2610, 2778, 2858
TscAI	CASTG	8 cut(s)	189, 384, 1158, 1194, 2008, 2323, 2620, 2756
TseFI	GTSAC	5 cut(s)	89, 1010, 1147, 2219, 2554
Tsp45I	GTSAC	5 cut(s)	89, 1010, 1147, 2219, 2554
TspDTI	ATGAA	6 cut(s)	248, 1731, 2118, 2292, 2421, 2601
TspGWI	ACGGA	1 cut(s)	1955
TspMI	CCCGGG	1 cut(s)	167
TspRI	CASTG	8 cut(s)	189, 384, 1158, 1194, 2008, 2323, 2620, 2756
Van91I	CCANNNNNTGG	2 cut(s)	383, 1163
Vha464I	CTTAAG	1 cut(s)	2777
VpaK11BI	GGWCC	2 cut(s)	1631, 1852
VspI	ATTAAT	1 cut(s)	2487
XagI	CCTNNNNNAGG	1 cut(s)	1234
XapI	RAATTY	8 cut(s)	598, 699, 820, 842, 1250, 1596, 1618, 2702
XceI	RCATGY	4 cut(s)	459, 1042, 1705, 2725
XhoI	CTCGAG	2 cut(s)	1304, 1589
XmaI	CCCGGG	1 cut(s)	167
XmiI	GTMKAC	1 cut(s)	694
XmnI	GAANNNNTTC	2 cut(s)	113, 255
XspI	CTAG	2 cut(s)	23, 363
ZrmI	AGTACT	1 cut(s)	784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.