Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0005632

Physical Location & Seq

Genomic Coordinates Reverse (-)

69439557 .. 69451675

Gene Structure 12119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG514800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGGGTGACAAGGAGACATTGGAGAATGGGTTTGCTGAAAGAGATGAGCGACATTCTGAGTCTTCAATTGGGAAGGTTGACCCGGGGAAACCTGCATCACTGACGTGGCAGCGAAAATTAATCAGCAAGGGAAATAATATCGTGGAGTTCAATCTAACTTTGAAAGAAGTTATTCATTTGGCTCCAATTGGTCTTCGTCTATGGCGCCATCTAAGAGAAGAAACTGCTAAAGGAAGGGAGATTATGATTGATCCATTTAGTAAGCGCAGTCGATCATCTAGTCATGGTGTACCATTGGGTGGTATTGGTGGAGGAAGCATCGGTAGAAGTATAAGAGGTGAGTTTCAGCGCTGGCAGCTACTCCCCAGAACATGTGAAGAGGATCCAGTTTTAGCAGATCAATTTTCTGTATTTGTTTCCCGCAGCAATGGTGAAAAGTATTCTACTGTACTCTGTCCGAGGAACCCAGAGGTCAAAGGAAACAACGCGTCAGGGATTGGATCTTGGGACTGGAATTTGAAGGGGGATAAATCTACCTATCATGCCCTTTTCCCAAGGGCTTGGTCTATTTATGAGGGTGAACCTGACCCAGCACTCAAAATAGTCTGTCGTCAGATTTCACCTATTATTCCCCATAATTACAAGGAGAGCAGCTTCCCTGTCTCAGTTTTTACTTTCACTCTATATAATTCCGGAAGTACTGCTGCAGATGCCACTTTGCTTTTCACATGGGCAAATTCTGTTGGAGGGCTCTCTGAATTTTCTGGTCAACACTTTAATTCAAGAGCAGAGGTGAAGGATGGCGTGCATAGTGTACTTCTACATCACAAGAGTGCGACTGGAAAATCCCCATTGACATTTGCAATAGCAGCAGAGCAGACTGATGGTGTTCACGTGTCAGAGTGCCCTTGCTTTGTGATATCTGGTGACTCCAAGGGTATTAGTGCTAAAGACATGTGGAATGAGATAAAACAGCATGGATCATTTGACGGTCTTAATTCAGCTGAAACATCATTACCTTCAGAACAAGGATCGTCTATTGGGGCAGCCATTGCTGCATCTGTGACTGTACCATCAGATGGAGTACGTACTGTAACATTTTCACTGGCATGGGATTGCCCTGAAATAATTATGGGTGGAAAGACCTACTACAGGCGTTACACTAAATTCTATGGCACACGTGGGAATGCAGCTGCAAATATTGCTCATGATGCTATTCTCGAGCATCACAATTGGGAGTCCCAAGTCGAAGCATGGCAAAAACCAATTCTTGAAGATGAGAGACTTCCTGAATGGTACCCTGTTACTCTGTTCAATGAGCTATATTATCTTAATTCTGGCGGCACAATTTGGACAGATGGATCACCTCCTGTGCATAGTTTAGCAAGTATTGGAGGAAGGAAGTTTTCCCTTGATAAGTCCTCATTAGGTTTGAAAAACATCATTGATTCACCCCAGCAAAATGATACTGCTGTTGACATTCTTGGAAGAATGACTAAAATACTTGAGCAAATTCACACGCCCATGGCATCAAATTCTGCATTTGGACCAAATCTACTTCAGGAGGGAGAAGAAAACATTGGTCAATTCCTTTATCTTGAAGGAGTTGAATATCACATGTGGAACACTTACGATGTCCATTTTTACTCATCTTTTTCACTTGTCATGCTATTTCCAAAACTTGAACTCAGCATACAAAGAGACTTTGCAGCAGCAGTAATGATGCACGACCCCAGTAAGATGAGTCTTTTATGTGATGGAAAGTTGGTCCAAAGAAAGGTTCTTGGAGCTGTTCCCCATGATATTGGGATCTATGATCCATGGTTTGAAGTAAATGCTTATAACCTTTACAATACAGATAGGTGGAAGGACTTGAATCCTAAGTTTGTTCTCCAAGTTTACAGGGATGTGGTTGCCACTGGTGATAAGAAGTTTGCAGAAGCTGTTTGGCCTTCTGTTTATGTTGCAATGGCTTATATGGAACAATTTGACAGGGATGGTGATGGTATGATTGAGAATGAAGGCTTCCCTGATCAAACGTATGATACATGGTCTGTCTCTGGTGTGAGTGCATATAGCGGTGGGTTGTGGTTAGCAGCTCTGCAGGCTGCTTCAGCCATGGCACGTGAAGTAGGTGACAAGGGTTCTGAGGATTATTTTTGGTGCAAATTTCAGAGGGCAAAAGCGGTGTATGAAAAATTATGGAATGGATCTTACTTCAATTATGATAACAGTGGTCAAAGTGCAAGTTCATCAATTCAAGCAGATCAACTGGCTGGACAATGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004348 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005790 GO:0005886 GO:0006082 GO:0006629 GO:0006643 GO:0006664 GO:0006665 GO:0006687 GO:0006807 GO:0007275 GO:0007399 GO:0007417 GO:0008150 GO:0008152 GO:0008202 GO:0008206 GO:0008422 GO:0009056 GO:0009987 GO:0012505 GO:0015926 GO:0016020 GO:0016021 GO:0016137 GO:0016139 GO:0016787 GO:0016798 GO:0019752 GO:0021953 GO:0021954 GO:0022008 GO:0030154 GO:0030182 GO:0031224 GO:0032501 GO:0032502 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0048468 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0071704 GO:0071944 GO:1901135 GO:1901136 GO:1901360 GO:1901564 GO:1901575 GO:1901615 GO:1901657 GO:1901658 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00511 ko00600 ko01100 map00511 map00600 map01100

Pfam Domains

Protein Families

DUF608 Glyco_hydr_116N

Protein Analysis

762

Amino Acids

84.72

Weight (kDa)

5.56

Isoelectric Point (pI)

40.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydr_116N	PF12215	96 - 412	1.1e-108	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term
DUF608	PF04685	528 - 762	2.1e-107	Glycosyl-hydrolase family 116, catalytic region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49900 AT5G49900 AT5G49900
fragaria_vesca	FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140
malus_domestica	MD08G1245400.v1.1 MD15G1440400.v1.1
prunus_persica	Prupe.1G582500_v2.0.a1 Prupe.1G582500_v2.0.a1
pyrus_communis	pycom08g21280 pycom15g38820
rosa_chinensis	RchiOBHm_Chr7g0241141
rosa_laevigata	RLG00000000592
rosa_multiflora	Rmu_sc0006665.1_g000004
rosa_roxburghii	Rroxscaffold_3G00219230
rosa_rugosa	Rorug07G0343100 Rorug07G0343200 Rorug07G0343300 Rorug07G0343400.1 Rorug07G0343500.1
rosa_samantha	Rh7AG498100 Rh7BG468700 Rh7CG514800 Rh7DG482200
rosa_wichuraiana	Rw7G042010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1842
Acc36I	ACCTGC	1 cut(s)	100
Acc65I	GGTACC	1 cut(s)	1296
AccB1I	GGYRCC	2 cut(s)	204, 1296
AccB7I	CCANNNNNTGG	2 cut(s)	299, 1079
AccII	CGCG	1 cut(s)	488
AccIII	TCCGGA	1 cut(s)	692
AciI	CCGC	4 cut(s)	421, 1341, 2079, 2186
AcsI	RAATTY	7 cut(s)	514, 736, 758, 1166, 1512, 1534, 2168
AcuI	CTGAAG	3 cut(s)	1005, 1544, 2097
AcvI	CACGTG	3 cut(s)	895, 1181, 2126
AcyI	GRCGYC	1 cut(s)	205
AfaI	GTAC	8 cut(s)	291, 450, 700, 816, 1071, 1086, 1090, 1298
AfeI	AGCGCT	1 cut(s)	350
AfiI	CCNNNNNNNGG	4 cut(s)	299, 1079, 1152, 1777
AflIII	ACRYGT	6 cut(s)	371, 486, 894, 954, 1178, 1617
AjiI	CACGTC	1 cut(s)	105
AjuI	GAANNNNNNNTTGG	4 cut(s)	1563, 1595, 1764, 1796
AleI	CACNNNNGTG	2 cut(s)	103, 831
AluBI	AGCT	8 cut(s)	358, 654, 1004, 1193, 1321, 1790, 1943, 2099
AluI	AGCT	8 cut(s)	358, 654, 1004, 1193, 1321, 1790, 1943, 2099
Alw26I	GTCTC	5 cut(s)	8, 667, 1276, 1695, 2062
AlwNI	CAGNNNCTG	1 cut(s)	1943
Ama87I	CYCGRG	2 cut(s)	82, 1220
Aor13HI	TCCGGA	1 cut(s)	692
Aor51HI	AGCGCT	1 cut(s)	350
AoxI	GGCC	1 cut(s)	1949
ApoI	RAATTY	7 cut(s)	514, 736, 758, 1166, 1512, 1534, 2168
AseI	ATTAAT	1 cut(s)	119
Asp700I	GAANNNNTTC	1 cut(s)	171
Asp718I	GGTACC	1 cut(s)	1296
AspLEI	GCGC	3 cut(s)	207, 267, 351
AspS9I	GGNCC	2 cut(s)	1547, 1768
AsuC2I	CCSGG	2 cut(s)	83, 84
AvaI	CYCGRG	2 cut(s)	82, 1220
AvaII	GGWCC	2 cut(s)	1547, 1768
BaeGI	GKGCMC	1 cut(s)	908
BaeI	ACNNNNGTAYC	2 cut(s)	1458, 1491
BamHI	GGATCC	1 cut(s)	382
BanI	GGYRCC	2 cut(s)	204, 1296
BanII	GRGCYC	1 cut(s)	753
BbrPI	CACGTG	3 cut(s)	895, 1181, 2126
BbsI	GAAGAC	2 cut(s)	54, 185
BccI	CCATC	9 cut(s)	216, 794, 878, 1073, 1081, 1352, 1751, 1991, 1997
BclI	TGATCA	1 cut(s)	2032
BcnI	CCSGG	2 cut(s)	83, 84
BcoDI	GTCTC	5 cut(s)	8, 667, 1276, 1695, 2062
BfaI	CTAG	1 cut(s)	279
BfmI	CTRYAG	3 cut(s)	705, 1150, 2102
BfoI	RGCGCY	2 cut(s)	208, 352
BfuAI	ACCTGC	1 cut(s)	100
BmcAI	AGTACT	1 cut(s)	700
Bme1390I	CCNGG	2 cut(s)	83, 84
Bme18I	GGWCC	2 cut(s)	1547, 1768
BmeT110I	CYCGRG	2 cut(s)	82, 1220
BmgBI	CACGTC	1 cut(s)	105
BmgT120I	GGNCC	2 cut(s)	1547, 1768
BmiI	GGNNCC	5 cut(s)	183, 206, 384, 464, 1298
BmrFI	CCNGG	2 cut(s)	83, 84
BmrI	ACTGGG	1 cut(s)	1728
BmsI	GCATC	8 cut(s)	104, 327, 700, 1067, 1201, 1234, 1538, 1713
BmuI	ACTGGG	1 cut(s)	1728
BpiI	GAAGAC	2 cut(s)	54, 185
BpuEI	CTTGAG	1 cut(s)	1526
BpuMI	CCSGG	2 cut(s)	83, 84
BsaAI	YACGTR	4 cut(s)	895, 1088, 1181, 2126
BsaHI	GRCGYC	1 cut(s)	205
BsaJI	CCNNGG	8 cut(s)	82, 83, 458, 554, 933, 1524, 1820, 2118
BsaWI	WCCGGW	1 cut(s)	692
BsaXI	ACNNNNNCTCC	2 cut(s)	14, 44
Bsc4I	CCNNNNNNNGG	4 cut(s)	299, 1079, 1152, 1777
Bse1I	ACTGG	7 cut(s)	386, 515, 844, 1110, 1734, 1924, 2277
Bse3DI	GCAATG	3 cut(s)	433, 1050, 1974
BseAI	TCCGGA	1 cut(s)	692
BseDI	CCNNGG	8 cut(s)	82, 83, 458, 554, 933, 1524, 1820, 2118
BseGI	GGATG	3 cut(s)	805, 1912, 2002
BseLI	CCNNNNNNNGG	4 cut(s)	299, 1079, 1152, 1777
BseMI	GCAATG	3 cut(s)	433, 1050, 1974
BseMII	CTCAG	4 cut(s)	48, 678, 1702, 2139
BseNI	ACTGG	7 cut(s)	386, 515, 844, 1110, 1734, 1924, 2277
BseSI	GKGCMC	1 cut(s)	908
BseYI	CCCAGC	2 cut(s)	589, 1455
Bsh1236I	CGCG	1 cut(s)	488
BshFI	GGCC	1 cut(s)	1951
BshNI	GGYRCC	2 cut(s)	204, 1296
BsiHKCI	CYCGRG	2 cut(s)	82, 1220
BsiSI	CCGG	2 cut(s)	83, 693
BslFI	GGGAC	2 cut(s)	521, 1225
BslI	CCNNNNNNNGG	4 cut(s)	299, 1079, 1152, 1777
BsmAI	GTCTC	5 cut(s)	8, 667, 1276, 1695, 2062
BsmFI	GGGAC	2 cut(s)	521, 1225
BsmI	GAATGC	1 cut(s)	1192
BsnI	GGCC	1 cut(s)	1951
BsoBI	CYCGRG	2 cut(s)	82, 1220
Bsp1286I	GDGCHC	2 cut(s)	753, 908
Bsp13I	TCCGGA	1 cut(s)	692
Bsp19I	CCATGG	3 cut(s)	1524, 1820, 2118
BspACI	CCGC	4 cut(s)	421, 1341, 2079, 2186
BspANI	GGCC	1 cut(s)	1951
BspCNI	CTCAG	4 cut(s)	49, 677, 1701, 2140
BspEI	TCCGGA	1 cut(s)	692
BspFNI	CGCG	1 cut(s)	488
BspHI	TCATGA	1 cut(s)	1207
BspLI	GGNNCC	5 cut(s)	183, 206, 384, 464, 1298
BspMAI	CTGCAG	2 cut(s)	709, 2106
BspMI	ACCTGC	1 cut(s)	100
BspT107I	GGYRCC	2 cut(s)	204, 1296
BsrDI	GCAATG	3 cut(s)	433, 1050, 1974
BsrI	ACTGG	7 cut(s)	386, 515, 844, 1110, 1734, 1924, 2277
BssECI	CCNNGG	8 cut(s)	82, 83, 458, 554, 933, 1524, 1820, 2118
BssNI	GRCGYC	1 cut(s)	205
BssT1I	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
Bst4CI	ACNGT	5 cut(s)	448, 992, 1069, 1093, 2234
Bst6I	CTCTTC	1 cut(s)	372
BstACI	GRCGYC	1 cut(s)	205
BstAPI	GCANNNNNTGC	2 cut(s)	1052, 1202
BstBAI	YACGTR	4 cut(s)	895, 1088, 1181, 2126
BstC8I	GCNNGC	3 cut(s)	353, 806, 2106
BstDEI	CTNAG	6 cut(s)	57, 212, 664, 1688, 1881, 2148
BstDSI	CCRYGG	3 cut(s)	1524, 1820, 2118
BstENI	CCTNNNNNAGG	1 cut(s)	1150
BstF5I	GGATG	3 cut(s)	805, 1912, 2002
BstFNI	CGCG	1 cut(s)	488
BstH2I	RGCGCY	2 cut(s)	208, 352
BstHHI	GCGC	3 cut(s)	207, 267, 351
BstMAI	GTCTC	5 cut(s)	8, 667, 1276, 1695, 2062
BstMWI	GCNNNNNNNGC	9 cut(s)	355, 710, 869, 1052, 1055, 1202, 1211, 2105, 2114
BstNSI	RCATGY	3 cut(s)	375, 958, 1621
BstSCI	CCNGG	2 cut(s)	81, 82
BstSFI	CTRYAG	3 cut(s)	705, 1150, 2102
BstSLI	GKGCMC	1 cut(s)	908
BstSNI	TACGTA	1 cut(s)	1088
BstUI	CGCG	1 cut(s)	488
BstV2I	GAAGAC	2 cut(s)	54, 185
BstX2I	RGATCY	4 cut(s)	382, 500, 1809, 2210
BstXI	CCANNNNNNTGG	2 cut(s)	561, 1805
BstYI	RGATCY	4 cut(s)	382, 500, 1809, 2210
BsuRI	GGCC	1 cut(s)	1951
BtgI	CCRYGG	3 cut(s)	1524, 1820, 2118
BtrI	CACGTC	1 cut(s)	105
BtsCI	GGATG	3 cut(s)	805, 1912, 2002
BtsIMutI	CAGTG	4 cut(s)	98, 1103, 1917, 2239
BveI	ACCTGC	1 cut(s)	100
Cac8I	GCNNGC	3 cut(s)	353, 806, 2106
CaiI	CAGNNNCTG	1 cut(s)	1943
CciI	TCATGA	1 cut(s)	1207
CfoI	GCGC	3 cut(s)	207, 267, 351
Cfr13I	GGNCC	2 cut(s)	1547, 1768
Cfr9I	CCCGGG	1 cut(s)	82
CseI	GACGC	1 cut(s)	477
Csp6I	GTAC	8 cut(s)	290, 449, 699, 815, 1070, 1085, 1089, 1297
CviQI	GTAC	8 cut(s)	290, 449, 699, 815, 1070, 1085, 1089, 1297
DdeI	CTNAG	6 cut(s)	57, 212, 664, 1688, 1881, 2148
DinI	GGCGCC	1 cut(s)	206
Eam1104I	CTCTTC	1 cut(s)	372
EarI	CTCTTC	1 cut(s)	372
Eco105I	TACGTA	1 cut(s)	1088
Eco130I	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
Eco24I	GRGCYC	1 cut(s)	753
Eco32I	GATATC	1 cut(s)	921
Eco47I	GGWCC	2 cut(s)	1547, 1768
Eco47III	AGCGCT	1 cut(s)	350
Eco57I	CTGAAG	3 cut(s)	1005, 1544, 2097
Eco72I	CACGTG	3 cut(s)	895, 1181, 2126
Eco88I	CYCGRG	2 cut(s)	82, 1220
EcoNI	CCTNNNNNAGG	1 cut(s)	1150
EcoRV	GATATC	1 cut(s)	921
EcoT14I	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
EcoT38I	GRGCYC	1 cut(s)	753
EgeI	GGCGCC	1 cut(s)	206
EheI	GGCGCC	1 cut(s)	206
ErhI	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
FaqI	GGGAC	2 cut(s)	521, 1225
FauI	CCCGC	1 cut(s)	428
FbaI	TGATCA	1 cut(s)	2032
FokI	GGATG	3 cut(s)	812, 1919, 2009
FriOI	GRGCYC	1 cut(s)	753
FspBI	CTAG	1 cut(s)	279
GlaI	GCGC	3 cut(s)	206, 266, 350
GsaI	CCCAGC	2 cut(s)	593, 1459
HaeII	RGCGCY	2 cut(s)	208, 352
HaeIII	GGCC	1 cut(s)	1951
HapII	CCGG	2 cut(s)	83, 693
HgaI	GACGC	1 cut(s)	477
HhaI	GCGC	3 cut(s)	207, 267, 351
Hin1I	GRCGYC	1 cut(s)	205
Hin6I	GCGC	3 cut(s)	205, 265, 349
HinP1I	GCGC	3 cut(s)	205, 265, 349
HincII	GTYRAC	3 cut(s)	79, 770, 1477
HindII	GTYRAC	3 cut(s)	79, 770, 1477
HinfI	GANTC	6 cut(s)	59, 929, 1238, 1448, 1744, 1876
HpaII	CCGG	2 cut(s)	83, 693
Hpy166II	GTNNAC	8 cut(s)	79, 290, 581, 770, 815, 892, 1477, 1900
Hpy188I	TCNGA	9 cut(s)	58, 459, 615, 757, 901, 1024, 1078, 2149, 2175
Hpy188III	TCNNGA	8 cut(s)	693, 783, 1208, 1220, 1271, 1289, 1562, 1598
Hpy8I	GTNNAC	8 cut(s)	79, 290, 581, 770, 815, 892, 1477, 1900
HpyCH4III	ACNGT	5 cut(s)	448, 992, 1069, 1093, 2234
HpyCH4IV	ACGT	6 cut(s)	104, 894, 1087, 1180, 2039, 2125
HpyF10VI	GCNNNNNNNGC	9 cut(s)	355, 710, 869, 1052, 1055, 1202, 1211, 2105, 2114
HpyF3I	CTNAG	6 cut(s)	57, 212, 664, 1688, 1881, 2148
HpySE526I	ACGT	6 cut(s)	104, 894, 1087, 1180, 2039, 2125
Hsp92I	GRCGYC	1 cut(s)	205
HspAI	GCGC	3 cut(s)	205, 265, 349
KasI	GGCGCC	1 cut(s)	204
Kpn2I	TCCGGA	1 cut(s)	692
KpnI	GGTACC	1 cut(s)	1300
Ksp22I	TGATCA	1 cut(s)	2032
LmnI	GCTCC	2 cut(s)	187, 1787
LweI	GCATC	8 cut(s)	104, 327, 700, 1067, 1201, 1234, 1538, 1713
MaeI	CTAG	1 cut(s)	279
MaeII	ACGT	6 cut(s)	104, 894, 1087, 1180, 2039, 2125
MaeIII	GTNAC	7 cut(s)	5, 926, 1063, 1093, 1157, 1303, 2135
MboII	GAAGA	7 cut(s)	54, 185, 230, 389, 1286, 1500, 1583
MfeI	CAATTG	3 cut(s)	66, 186, 1231
MflI	RGATCY	4 cut(s)	382, 500, 1809, 2210
MhlI	GDGCHC	2 cut(s)	753, 908
MluI	ACGCGT	1 cut(s)	486
Mly113I	GGCGCC	1 cut(s)	205
MlyI	GAGTC	4 cut(s)	68, 923, 1247, 1753
MmeI	TCCRAC	1 cut(s)	724
MroI	TCCGGA	1 cut(s)	692
MroXI	GAANNNNTTC	1 cut(s)	171
MseI	TTAA	4 cut(s)	119, 777, 996, 1332
MslI	CAYNNNNRTG	4 cut(s)	103, 831, 1108, 1523
MspA1I	CMGCKG	2 cut(s)	1004, 1193
MspI	CCGG	2 cut(s)	83, 693
MspR9I	CCNGG	2 cut(s)	83, 84
MunI	CAATTG	3 cut(s)	66, 186, 1231
Mva1269I	GAATGC	1 cut(s)	1192
MvnI	CGCG	1 cut(s)	488
MwoI	GCNNNNNNNGC	9 cut(s)	355, 710, 869, 1052, 1055, 1202, 1211, 2105, 2114
NarI	GGCGCC	1 cut(s)	205
NciI	CCSGG	2 cut(s)	83, 84
NcoI	CCATGG	3 cut(s)	1524, 1820, 2118
NlaIV	GGNNCC	5 cut(s)	183, 206, 384, 464, 1298
NmuCI	GTSAC	4 cut(s)	5, 926, 1063, 2135
NspI	RCATGY	3 cut(s)	375, 958, 1621
OliI	CACNNNNGTG	2 cut(s)	103, 831
PaeR7I	CTCGAG	1 cut(s)	1220
PagI	TCATGA	1 cut(s)	1207
PciI	ACATGT	3 cut(s)	371, 954, 1617
PctI	GAATGC	1 cut(s)	1192
PdmI	GAANNNNTTC	1 cut(s)	171
PfeI	GAWTC	2 cut(s)	1448, 1876
PflMI	CCANNNNNTGG	2 cut(s)	299, 1079
PleI	GAGTC	4 cut(s)	67, 923, 1246, 1752
PluTI	GGCGCC	1 cut(s)	208
PmaCI	CACGTG	3 cut(s)	895, 1181, 2126
PmlI	CACGTG	3 cut(s)	895, 1181, 2126
PpsI	GAGTC	4 cut(s)	67, 923, 1246, 1752
Ppu21I	YACGTR	4 cut(s)	895, 1088, 1181, 2126
PscI	ACATGT	3 cut(s)	371, 954, 1617
PshBI	ATTAAT	1 cut(s)	119
PsiI	TTATAA	1 cut(s)	1842
PspCI	CACGTG	3 cut(s)	895, 1181, 2126
PspFI	CCCAGC	2 cut(s)	589, 1455
PspN4I	GGNNCC	5 cut(s)	183, 206, 384, 464, 1298
PspPI	GGNCC	2 cut(s)	1547, 1768
PsrI	GAACNNNNNNTAC	2 cut(s)	1677, 1709
PstI	CTGCAG	2 cut(s)	709, 2106
PstNI	CAGNNNCTG	1 cut(s)	1943
PsuI	RGATCY	4 cut(s)	382, 500, 1809, 2210
PvuII	CAGCTG	2 cut(s)	1004, 1193
RsaI	GTAC	8 cut(s)	291, 450, 700, 816, 1071, 1086, 1090, 1298
RsaNI	GTAC	8 cut(s)	290, 449, 699, 815, 1070, 1085, 1089, 1297
RseI	CAYNNNNRTG	4 cut(s)	103, 831, 1108, 1523
SaqAI	TTAA	4 cut(s)	119, 777, 996, 1332
Sau96I	GGNCC	2 cut(s)	1547, 1768
ScaI	AGTACT	1 cut(s)	700
SchI	GAGTC	4 cut(s)	68, 923, 1247, 1753
ScrFI	CCNGG	2 cut(s)	83, 84
SduI	GDGCHC	2 cut(s)	753, 908
SfaNI	GCATC	8 cut(s)	104, 327, 700, 1067, 1201, 1234, 1538, 1713
SfcI	CTRYAG	3 cut(s)	705, 1150, 2102
SfoI	GGCGCC	1 cut(s)	206
Sfr274I	CTCGAG	1 cut(s)	1220
SinI	GGWCC	2 cut(s)	1547, 1768
SlaI	CTCGAG	1 cut(s)	1220
SmaI	CCCGGG	1 cut(s)	84
SmiMI	CAYNNNNRTG	4 cut(s)	103, 831, 1108, 1523
SmlI	CTYRAG	2 cut(s)	1220, 1505
SmoI	CTYRAG	2 cut(s)	1220, 1505
SnaBI	TACGTA	1 cut(s)	1088
SsiI	CCGC	4 cut(s)	421, 1341, 2079, 2186
SspDI	GGCGCC	1 cut(s)	204
SspI	AATATT	1 cut(s)	1201
SspMI	CTAG	1 cut(s)	279
StyD4I	CCNGG	2 cut(s)	81, 82
StyI	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
TaaI	ACNGT	5 cut(s)	448, 992, 1069, 1093, 2234
TaiI	ACGT	6 cut(s)	107, 897, 1090, 1183, 2042, 2128
TaqI	TCGA	3 cut(s)	271, 1221, 1248
TatI	WGTACW	3 cut(s)	448, 698, 814
TauI	GCSGC	1 cut(s)	1344
TfiI	GAWTC	2 cut(s)	1448, 1876
Tru1I	TTAA	4 cut(s)	119, 777, 996, 1332
Tru9I	TTAA	4 cut(s)	119, 777, 996, 1332
TscAI	CASTG	4 cut(s)	105, 1110, 1924, 2239
TseFI	GTSAC	4 cut(s)	5, 926, 1063, 2135
Tsp45I	GTSAC	4 cut(s)	5, 926, 1063, 2135
TspDTI	ATGAA	4 cut(s)	164, 2034, 2208, 2241
TspMI	CCCGGG	1 cut(s)	82
TspRI	CASTG	4 cut(s)	105, 1110, 1924, 2239
Van91I	CCANNNNNTGG	2 cut(s)	299, 1079
VpaK11BI	GGWCC	2 cut(s)	1547, 1768
VspI	ATTAAT	1 cut(s)	119
XagI	CCTNNNNNAGG	1 cut(s)	1150
XapI	RAATTY	7 cut(s)	514, 736, 758, 1166, 1512, 1534, 2168
XceI	RCATGY	3 cut(s)	375, 958, 1621
XhoI	CTCGAG	1 cut(s)	1220
XmaI	CCCGGG	1 cut(s)	82
XmnI	GAANNNNTTC	1 cut(s)	171
XspI	CTAG	1 cut(s)	279
ZrmI	AGTACT	1 cut(s)	700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.