Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006665.1

Orthogroup ID

OG0005632

Physical Location & Seq

Genomic Coordinates Forward (+)

20659 .. 35150

Gene Structure 14492 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006665.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3183 bp

atgcctaagcatctatcaacacgatgctcaagttccaaaccgagacataatcgtgttctcccaaaatccttcatctcaaactcggatttcaagtgttcagcggtttcctttaactctttaagagcttctaatgaagatcatgtccaacatgaacagcgatggaatccgaaacttgttatggaaacaagtgggcatatcccctcccaatcaagtagtcattttagcgagcgtttcaacctagcttctaatgaagaccatgtccaacatgaacagcgatggaatccgaaacttgttatggaaacaagtgggcatatcccctcccaatcaacacaggttgatgatgtaggcggcggttcggtggttcaggaggccggttcgcgtggttctaggccgctgctggtgcagtttggtagcagtaggcagggaggaaagcttcgaaccgggcaggaaggatatcggtatttctgggggccggtttgggtatttgccggccggttctggggacagccccgccggttctgggctcctggagatgagagattcaaggtgggcggcggaggtttctggggtttgaaggctacaaatattagtcagtcaggaaatatgggtgacatagagaatttggagaatgggttcgctgaaagagatgagcaacattctgagtcttcaattggcaaggttgacccggggaaacctgcatcactgacgtggcagcgaaaactaaacagcaagggaaatgatatcgtgcagttcaatctaactttgaaagaagttattcatttggctccaattggtcttcgtctatggcgccatcaacgagaagaagctgctaaaggaagggaggttatgattgatccatttactaagcgcagtcgatcatctagtcatggtgtaccactgggtggtattggtggaggaagcatcggaagaagtataagaggtgagtttcagcgctggcagctactccccagaacatgtgaagaggatccagttttagcagatcaattttctgtatttgtttcccgcagcaatggtgaaaagtattctactgtactctgtccgaggaacccagaggtcaaaggaaacaacacttcagggattggatcttgggactggaatttgaaaggggataaatctacctatcatgcccttttcccaagggcttggtctgtttatgagggtgaacctgacccagcactcaaaatagtctgtcgtcaaatttcacctattattccccataattacaaggagagcagcttccctgtctcagtttttactttcactctatataattctggaagtactgctgcagataccactttgcttttcacatgggcaaattctgttggagggctttctgaaatttctggtcaacactttaattcaagagcagaggtgaaggatggcgtgcatagtgtgcttctacatcacaagagtgcgaccggaaaatccccattgacgtttgcaatagcagcagagcagactgatggtgttcacgtgtcagagtgcccttgctttgtgatatctggtgactccaagggtattagtgctaaagacatgtggaatgagataaaacagcatggatcgtttgacggtcttaattcagctgaaacatcattaccttcagaacaaggatcgtctattggggcagccattgctgcatctgtgacggtaccatcagatggagtacgtactgtaacattttcactggcatgggattgcccggaaatagttatgggtggaaagacctattacaggcgttacactaaattctatggcacacgtgggaatgcagctgcaaatattgctcatgatgctattctcgagcatcacaattgggagtcccaagtcgaagcatggcaaagaccaattcttgaagataagagacttcctgaatggtaccctgttactctgttcaatgagctatattatcttaattctggcggcacaatttggacagatggatcacctcctgtgcatagtttagcaagtattggaggaaggaagttttcccttgataagtcctcattaggtttgaaaaacatcattgattcaccccagcaaaatgatactgctgttgacattcttggaagaatgactacaatactcgagcaaattcacacgcccatggcatcaaattctgcatttggaccaaatctacttcaggagggagaagaaaacattggtcaattcctttatcttgaaggagttgaatatcacatgtggaacacttacgatgtccatttttactcatctttttcattggtcatgctatttccaaaacttgaactcagcatacaaagagactttgcagcagcagtaatgatgcacgaccccagtaagatgagtcttttatgtgatggaaattcggtccaaagaaaggttcttggagctgttccccatgatattgggatccatgatccatggtttgaagtaaatgcttataatctttacaatacggataggtggaaagacttgaatcctaagtttgttctccaagtttacagggatgtggttgccactggtgataagaagtttgcagaagctgtttggccttctgtttatgttgcaatggcttatatggaacaatttgacagggatggtgatggtatgattgagaatgaaggcttccctgatcaaacgtatgatacatggtctgtctctggtgtgagtgcatatagcggtgggttgtggttagcagctctgcaggctgcttcagccatggcaggtgaagtaggtgacaagggttctgaggattatttttggtgcaagtttcagaaggcaaaagcggtgtatgaaaaattatggaatggatcttacttcaattatgataacagtggtcagagtgcaagctcatcaattcaagcagatcaattggctggacaatggtataccagagcgtgtggacttttgccaatcgttgatgaagacaaggcacaaagtgcattggaaaaggtttatacttataatgtcttaaaggtgaagggcgggaaactgggggctgttaacgggatgcttcctgatggaaaggttgacatgacatcaatgcagtcaagagaagtatggtcaggggtcacatatgctgttgctgcaacaatgatccatgaagatatgcttgatatggcatttaacactgctggtggaatctatgcagctgcttggtctgaagaaggtcttgggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004348 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005790 GO:0005886 GO:0006082 GO:0006629 GO:0006643 GO:0006664 GO:0006665 GO:0006687 GO:0006807 GO:0007275 GO:0007399 GO:0007417 GO:0008150 GO:0008152 GO:0008202 GO:0008206 GO:0008422 GO:0009056 GO:0009987 GO:0012505 GO:0015926 GO:0016020 GO:0016021 GO:0016137 GO:0016139 GO:0016787 GO:0016798 GO:0019752 GO:0021953 GO:0021954 GO:0022008 GO:0030154 GO:0030182 GO:0031224 GO:0032501 GO:0032502 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0048468 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0071704 GO:0071944 GO:1901135 GO:1901136 GO:1901360 GO:1901564 GO:1901575 GO:1901615 GO:1901657 GO:1901658 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00511 ko00600 ko01100 map00511 map00600 map01100

Pfam Domains

Protein Families

DUF608 Glyco_hydr_116N

Protein Analysis

1060

Amino Acids

117.35

Weight (kDa)

5.99

Isoelectric Point (pI)

41.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49900 AT5G49900 AT5G49900
fragaria_vesca	FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140
malus_domestica	MD08G1245400.v1.1 MD15G1440400.v1.1
prunus_persica	Prupe.1G582500_v2.0.a1 Prupe.1G582500_v2.0.a1
pyrus_communis	pycom08g21280 pycom15g38820
rosa_chinensis	RchiOBHm_Chr7g0241141
rosa_laevigata	RLG00000000592
rosa_multiflora	Rmu_sc0006665.1_g000004
rosa_roxburghii	Rroxscaffold_3G00219230
rosa_rugosa	Rorug07G0343100 Rorug07G0343200 Rorug07G0343300 Rorug07G0343400.1 Rorug07G0343500.1
rosa_samantha	Rh7AG498100 Rh7BG468700 Rh7CG514800 Rh7DG482200
rosa_wichuraiana	Rw7G042010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2445, 2967
AarI	CACCTGC	1 cut(s)	2717
Acc36I	ACCTGC	2 cut(s)	703, 2717
Acc65I	GGTACC	2 cut(s)	1672, 1899
AccB1I	GGYRCC	3 cut(s)	807, 1672, 1899
AccB7I	CCANNNNNTGG	2 cut(s)	902, 1682
AccI	GTMKAC	1 cut(s)	2891
AccII	CGCG	1 cut(s)	379
AcoI	YGGCCR	1 cut(s)	490
AcsI	RAATTY	9 cut(s)	619, 1117, 1218, 1339, 1362, 1769, 2115, 2137, 2365
AcuI	CTGAAG	4 cut(s)	1077, 1608, 2147, 2700
AcvI	CACGTG	2 cut(s)	1498, 1784
AcyI	GRCGYC	1 cut(s)	808
AdeI	CACNNNGTG	2 cut(s)	902, 2942
AfaI	GTAC	7 cut(s)	894, 1053, 1303, 1674, 1689, 1693, 1901
AfeI	AGCGCT	1 cut(s)	953
AfiI	CCNNNNNNNGG	6 cut(s)	499, 520, 902, 1682, 1755, 2380
AflIII	ACRYGT	5 cut(s)	974, 1497, 1557, 1781, 2220
AjiI	CACGTC	1 cut(s)	708
AjnI	CCWGG	1 cut(s)	526
AjuI	GAANNNNNNNTTGG	5 cut(s)	2166, 2198, 2367, 2399, 3159
AleI	CACNNNNGTG	2 cut(s)	706, 1434
AloI	GAACNNNNNNTCC	2 cut(s)	617, 649
Alw26I	GTCTC	5 cut(s)	37, 1270, 1879, 2298, 2665
AlwNI	CAGNNNCTG	1 cut(s)	2546
Ama87I	CYCGRG	3 cut(s)	685, 1823, 2108
Aor51HI	AGCGCT	1 cut(s)	953
AoxI	GGCC	5 cut(s)	369, 389, 470, 490, 2552
ApoI	RAATTY	9 cut(s)	619, 1117, 1218, 1339, 1362, 1769, 2115, 2137, 2365
Asp700I	GAANNNNTTC	2 cut(s)	632, 774
Asp718I	GGTACC	2 cut(s)	1672, 1899
AspLEI	GCGC	3 cut(s)	810, 870, 954
AspS9I	GGNCC	3 cut(s)	470, 2150, 2371
AsuC2I	CCSGG	4 cut(s)	442, 686, 687, 1724
AsuII	TTCGAA	1 cut(s)	436
AvaI	CYCGRG	3 cut(s)	685, 1823, 2108
AvaII	GGWCC	2 cut(s)	2150, 2371
BaeGI	GKGCMC	1 cut(s)	1511
BaeI	ACNNNNGTAYC	2 cut(s)	2061, 2094
BamHI	GGATCC	2 cut(s)	985, 2412
BanI	GGYRCC	3 cut(s)	807, 1672, 1899
BanII	GRGCYC	1 cut(s)	526
BarI	GAAGNNNNNNTAC	2 cut(s)	2083, 2115
BbrPI	CACGTG	2 cut(s)	1498, 1784
BbsI	GAAGAC	4 cut(s)	258, 657, 788, 2934
BciT130I	CCWGG	1 cut(s)	528
BclI	TGATCA	1 cut(s)	2635
BcnI	CCSGG	4 cut(s)	442, 686, 687, 1724
BcoDI	GTCTC	5 cut(s)	37, 1270, 1879, 2298, 2665
BfaI	CTAG	3 cut(s)	239, 387, 882
BfmI	CTRYAG	2 cut(s)	1308, 2705
BfoI	RGCGCY	2 cut(s)	811, 955
BfuAI	ACCTGC	2 cut(s)	703, 2717
BmcAI	AGTACT	1 cut(s)	1303
Bme1390I	CCNGG	5 cut(s)	442, 528, 686, 687, 1724
Bme18I	GGWCC	2 cut(s)	2150, 2371
BmeT110I	CYCGRG	3 cut(s)	685, 1823, 2108
BmgBI	CACGTC	1 cut(s)	708
BmgT120I	GGNCC	3 cut(s)	470, 2150, 2371
BmiI	GGNNCC	9 cut(s)	471, 525, 786, 809, 987, 1067, 1674, 1901, 2414
BmrFI	CCNGG	5 cut(s)	442, 528, 686, 687, 1724
BmrI	ACTGGG	3 cut(s)	908, 2331, 3005
BmuI	ACTGGG	3 cut(s)	908, 2331, 3005
BpiI	GAAGAC	4 cut(s)	258, 657, 788, 2934
BpmI	CTGGAG	1 cut(s)	549
Bpu10I	CCTNAGC	1 cut(s)	6
Bpu14I	TTCGAA	1 cut(s)	436
BpuEI	CTTGAG	1 cut(s)	13
BpuMI	CCSGG	4 cut(s)	442, 686, 687, 1724
BsaAI	YACGTR	3 cut(s)	1498, 1691, 1784
BsaHI	GRCGYC	1 cut(s)	808
BsaJI	CCNNGG	8 cut(s)	685, 686, 1061, 1157, 1536, 2127, 2423, 2721
BsaWI	WCCGGW	1 cut(s)	1442
BsaXI	ACNNNNNCTCC	2 cut(s)	617, 647
Bsc4I	CCNNNNNNNGG	6 cut(s)	499, 520, 902, 1682, 1755, 2380
Bse118I	RCCGGY	5 cut(s)	371, 472, 488, 492, 513
Bse1I	ACTGG	7 cut(s)	903, 989, 1118, 1713, 2337, 2527, 3000
Bse3DI	GCAATG	3 cut(s)	1036, 1653, 2577
BseBI	CCWGG	1 cut(s)	528
BseDI	CCNNGG	8 cut(s)	685, 686, 1061, 1157, 1536, 2127, 2423, 2721
BseGI	GGATG	4 cut(s)	1408, 2515, 2605, 3018
BseLI	CCNNNNNNNGG	6 cut(s)	499, 520, 902, 1682, 1755, 2380
BseMI	GCAATG	3 cut(s)	1036, 1653, 2577
BseMII	CTCAG	4 cut(s)	651, 1281, 2305, 2742
BseNI	ACTGG	7 cut(s)	903, 989, 1118, 1713, 2337, 2527, 3000
BseSI	GKGCMC	1 cut(s)	1511
BseX3I	CGGCCG	1 cut(s)	490
BseYI	CCCAGC	2 cut(s)	1192, 2058
BsgI	GTGCAG	2 cut(s)	422, 767
Bsh1236I	CGCG	1 cut(s)	379
Bsh1285I	CGRYCG	2 cut(s)	493, 1443
BshFI	GGCC	5 cut(s)	371, 391, 472, 492, 2554
BshNI	GGYRCC	3 cut(s)	807, 1672, 1899
BsiEI	CGRYCG	2 cut(s)	493, 1443
BsiHKCI	CYCGRG	3 cut(s)	685, 1823, 2108
BsiSI	CCGG	9 cut(s)	372, 441, 473, 489, 493, 514, 686, 1443, 1724
BslFI	GGGAC	3 cut(s)	516, 1124, 1828
BslI	CCNNNNNNNGG	6 cut(s)	499, 520, 902, 1682, 1755, 2380
BsmAI	GTCTC	5 cut(s)	37, 1270, 1879, 2298, 2665
BsmFI	GGGAC	3 cut(s)	516, 1124, 1828
BsmI	GAATGC	1 cut(s)	1795
BsnI	GGCC	5 cut(s)	371, 391, 472, 492, 2554
BsoBI	CYCGRG	3 cut(s)	685, 1823, 2108
Bsp119I	TTCGAA	1 cut(s)	436
Bsp1286I	GDGCHC	2 cut(s)	526, 1511
Bsp19I	CCATGG	3 cut(s)	2127, 2423, 2721
BspANI	GGCC	5 cut(s)	371, 391, 472, 492, 2554
BspCNI	CTCAG	4 cut(s)	652, 1280, 2304, 2743
BspFNI	CGCG	1 cut(s)	379
BspHI	TCATGA	1 cut(s)	1810
BspLI	GGNNCC	9 cut(s)	471, 525, 786, 809, 987, 1067, 1674, 1901, 2414
BspMAI	CTGCAG	2 cut(s)	1312, 2709
BspMI	ACCTGC	2 cut(s)	703, 2717
BspT104I	TTCGAA	1 cut(s)	436
BspT107I	GGYRCC	3 cut(s)	807, 1672, 1899
BsrDI	GCAATG	3 cut(s)	1036, 1653, 2577
BsrFI	RCCGGY	5 cut(s)	371, 472, 488, 492, 513
BsrI	ACTGG	7 cut(s)	903, 989, 1118, 1713, 2337, 2527, 3000
BssAI	RCCGGY	5 cut(s)	371, 472, 488, 492, 513
BssECI	CCNNGG	8 cut(s)	685, 686, 1061, 1157, 1536, 2127, 2423, 2721
BssNAI	GTATAC	1 cut(s)	2892
BssNI	GRCGYC	1 cut(s)	808
BssT1I	CCWWGG	5 cut(s)	1157, 1536, 2127, 2423, 2721
Bst1107I	GTATAC	1 cut(s)	2892
Bst2UI	CCWGG	1 cut(s)	528
Bst4CI	ACNGT	5 cut(s)	1051, 1595, 1672, 1696, 2837
Bst6I	CTCTTC	1 cut(s)	975
BstACI	GRCGYC	1 cut(s)	808
BstAPI	GCANNNNNTGC	4 cut(s)	1417, 1655, 1805, 2942
BstBAI	YACGTR	3 cut(s)	1498, 1691, 1784
BstBI	TTCGAA	1 cut(s)	436
BstC8I	GCNNGC	6 cut(s)	227, 490, 956, 1409, 2709, 2851
BstDEI	CTNAG	7 cut(s)	6, 660, 864, 1267, 2291, 2484, 2751
BstDSI	CCRYGG	3 cut(s)	2127, 2423, 2721
BstENI	CCTNNNNNAGG	1 cut(s)	1753
BstF5I	GGATG	4 cut(s)	1408, 2515, 2605, 3018
BstFNI	CGCG	1 cut(s)	379
BstH2I	RGCGCY	2 cut(s)	811, 955
BstHHI	GCGC	3 cut(s)	810, 870, 954
BstMAI	GTCTC	5 cut(s)	37, 1270, 1879, 2298, 2665
BstMCI	CGRYCG	2 cut(s)	493, 1443
BstNI	CCWGG	1 cut(s)	528
BstNSI	RCATGY	3 cut(s)	978, 1561, 2224
BstSCI	CCNGG	5 cut(s)	440, 526, 684, 685, 1722
BstSFI	CTRYAG	2 cut(s)	1308, 2705
BstSLI	GKGCMC	1 cut(s)	1511
BstSNI	TACGTA	1 cut(s)	1691
BstUI	CGCG	1 cut(s)	379
BstV2I	GAAGAC	4 cut(s)	258, 657, 788, 2934
BstX2I	RGATCY	4 cut(s)	985, 1103, 2412, 2813
BstXI	CCANNNNNNTGG	2 cut(s)	1164, 2408
BstYI	RGATCY	4 cut(s)	985, 1103, 2412, 2813
BstZ17I	GTATAC	1 cut(s)	2892
BstZI	CGGCCG	1 cut(s)	490
BsuRI	GGCC	5 cut(s)	371, 391, 472, 492, 2554
BtgI	CCRYGG	3 cut(s)	2127, 2423, 2721
BtgZI	GCGATG	2 cut(s)	172, 289
BtrI	CACGTC	1 cut(s)	708
BtsCI	GGATG	4 cut(s)	1408, 2515, 2605, 3018
BtsI	GCAGTG	1 cut(s)	3132
BtsIMutI	CAGTG	6 cut(s)	701, 896, 1706, 2520, 2842, 3132
BveI	ACCTGC	2 cut(s)	703, 2717
Cac8I	GCNNGC	6 cut(s)	227, 490, 956, 1409, 2709, 2851
CaiI	CAGNNNCTG	1 cut(s)	2546
CciI	TCATGA	1 cut(s)	1810
CfoI	GCGC	3 cut(s)	810, 870, 954
Cfr10I	RCCGGY	5 cut(s)	371, 472, 488, 492, 513
Cfr13I	GGNCC	3 cut(s)	470, 2150, 2371
Cfr9I	CCCGGG	1 cut(s)	685
Csp6I	GTAC	7 cut(s)	893, 1052, 1302, 1673, 1688, 1692, 1900
CviQI	GTAC	7 cut(s)	893, 1052, 1302, 1673, 1688, 1692, 1900
DdeI	CTNAG	7 cut(s)	6, 660, 864, 1267, 2291, 2484, 2751
DinI	GGCGCC	1 cut(s)	809
DraIII	CACNNNGTG	2 cut(s)	902, 2942
EaeI	YGGCCR	1 cut(s)	490
EagI	CGGCCG	1 cut(s)	490
Eam1104I	CTCTTC	1 cut(s)	975
EarI	CTCTTC	1 cut(s)	975
EciI	GGCGGA	1 cut(s)	570
EclXI	CGGCCG	1 cut(s)	490
Eco105I	TACGTA	1 cut(s)	1691
Eco130I	CCWWGG	5 cut(s)	1157, 1536, 2127, 2423, 2721
Eco24I	GRGCYC	1 cut(s)	526
Eco32I	GATATC	3 cut(s)	455, 742, 1524
Eco47I	GGWCC	2 cut(s)	2150, 2371
Eco47III	AGCGCT	1 cut(s)	953
Eco52I	CGGCCG	1 cut(s)	490
Eco57I	CTGAAG	4 cut(s)	1077, 1608, 2147, 2700
Eco72I	CACGTG	2 cut(s)	1498, 1784
Eco88I	CYCGRG	3 cut(s)	685, 1823, 2108
EcoNI	CCTNNNNNAGG	1 cut(s)	1753
EcoRII	CCWGG	1 cut(s)	526
EcoRV	GATATC	3 cut(s)	455, 742, 1524
EcoT14I	CCWWGG	5 cut(s)	1157, 1536, 2127, 2423, 2721
EcoT38I	GRGCYC	1 cut(s)	526
EgeI	GGCGCC	1 cut(s)	809
EheI	GGCGCC	1 cut(s)	809
ErhI	CCWWGG	5 cut(s)	1157, 1536, 2127, 2423, 2721
FalI	AAGNNNNNCTT	3 cut(s)	3099, 3131, 3159
FaqI	GGGAC	3 cut(s)	516, 1124, 1828
FauI	CCCGC	3 cut(s)	518, 1031, 2981
FauNDI	CATATG	1 cut(s)	3079
FbaI	TGATCA	1 cut(s)	2635
FblI	GTMKAC	1 cut(s)	2891
FokI	GGATG	4 cut(s)	1415, 2522, 2612, 3025
FriOI	GRGCYC	1 cut(s)	526
FspBI	CTAG	3 cut(s)	239, 387, 882
GlaI	GCGC	3 cut(s)	809, 869, 953
GsaI	CCCAGC	2 cut(s)	1196, 2062
GsuI	CTGGAG	1 cut(s)	549
HaeII	RGCGCY	2 cut(s)	811, 955
HaeIII	GGCC	5 cut(s)	371, 391, 472, 492, 2554
HapII	CCGG	9 cut(s)	372, 441, 473, 489, 493, 514, 686, 1443, 1724
HhaI	GCGC	3 cut(s)	810, 870, 954
Hin1I	GRCGYC	1 cut(s)	808
Hin6I	GCGC	3 cut(s)	808, 868, 952
HinP1I	GCGC	3 cut(s)	808, 868, 952
HincII	GTYRAC	5 cut(s)	682, 1373, 2080, 3007, 3034
HindII	GTYRAC	5 cut(s)	682, 1373, 2080, 3007, 3034
HindIII	AAGCTT	1 cut(s)	431
HpaI	GTTAAC	1 cut(s)	3007
HpaII	CCGG	9 cut(s)	372, 441, 473, 489, 493, 514, 686, 1443, 1724
HpyCH4III	ACNGT	5 cut(s)	1051, 1595, 1672, 1696, 2837
HpyCH4IV	ACGT	6 cut(s)	707, 1460, 1497, 1690, 1783, 2642
HpyF3I	CTNAG	7 cut(s)	6, 660, 864, 1267, 2291, 2484, 2751
HpySE526I	ACGT	6 cut(s)	707, 1460, 1497, 1690, 1783, 2642
Hsp92I	GRCGYC	1 cut(s)	808
HspAI	GCGC	3 cut(s)	808, 868, 952
KasI	GGCGCC	1 cut(s)	807
KpnI	GGTACC	2 cut(s)	1676, 1903
KroI	GCCGGC	1 cut(s)	488
KroNI	GCCGGC	1 cut(s)	490
Ksp22I	TGATCA	1 cut(s)	2635
KspAI	GTTAAC	1 cut(s)	3007
LmnI	GCTCC	3 cut(s)	529, 790, 2390
MaeI	CTAG	3 cut(s)	239, 387, 882
MaeII	ACGT	6 cut(s)	707, 1460, 1497, 1690, 1783, 2642
MaeIII	GTNAC	8 cut(s)	608, 1529, 1666, 1696, 1760, 1906, 2738, 3073
MfeI	CAATTG	4 cut(s)	669, 789, 1834, 2873
MflI	RGATCY	4 cut(s)	985, 1103, 2412, 2813
MhlI	GDGCHC	2 cut(s)	526, 1511
Mly113I	GGCGCC	1 cut(s)	808
MlyI	GAGTC	4 cut(s)	671, 1526, 1850, 2356
MmeI	TCCRAC	3 cut(s)	169, 286, 1327
MroNI	GCCGGC	1 cut(s)	488
MroXI	GAANNNNTTC	2 cut(s)	632, 774
MseI	TTAA	8 cut(s)	111, 119, 1380, 1599, 1935, 2975, 3006, 3129
MslI	CAYNNNNRTG	5 cut(s)	51, 706, 1434, 1711, 2126
MspA1I	CMGCKG	5 cut(s)	101, 394, 1607, 1796, 3155
MspI	CCGG	9 cut(s)	372, 441, 473, 489, 493, 514, 686, 1443, 1724
MspR9I	CCNGG	5 cut(s)	442, 528, 686, 687, 1724
MunI	CAATTG	4 cut(s)	669, 789, 1834, 2873
Mva1269I	GAATGC	1 cut(s)	1795
MvaI	CCWGG	1 cut(s)	528
MvnI	CGCG	1 cut(s)	379
NaeI	GCCGGC	1 cut(s)	490
NarI	GGCGCC	1 cut(s)	808
NciI	CCSGG	4 cut(s)	442, 686, 687, 1724
NcoI	CCATGG	3 cut(s)	2127, 2423, 2721
NdeI	CATATG	1 cut(s)	3079
NgoMIV	GCCGGC	1 cut(s)	488
NlaIV	GGNNCC	9 cut(s)	471, 525, 786, 809, 987, 1067, 1674, 1901, 2414
NmuCI	GTSAC	5 cut(s)	608, 1529, 1666, 2738, 3073
NspI	RCATGY	3 cut(s)	978, 1561, 2224
NspV	TTCGAA	1 cut(s)	436
OliI	CACNNNNGTG	2 cut(s)	706, 1434
PaeR7I	CTCGAG	2 cut(s)	1823, 2108
PagI	TCATGA	1 cut(s)	1810
PaqCI	CACCTGC	1 cut(s)	2717
PciI	ACATGT	3 cut(s)	974, 1557, 2220
PctI	GAATGC	1 cut(s)	1795
PdiI	GCCGGC	1 cut(s)	490
PdmI	GAANNNNTTC	2 cut(s)	632, 774
PfeI	GAWTC	6 cut(s)	163, 280, 540, 2051, 2479, 3144
PflFI	GACNNNGTC	1 cut(s)	257
PflMI	CCANNNNNTGG	2 cut(s)	902, 1682
PfoI	TCCNGGA	1 cut(s)	526
PleI	GAGTC	4 cut(s)	670, 1526, 1849, 2355
PluTI	GGCGCC	1 cut(s)	811
PmaCI	CACGTG	2 cut(s)	1498, 1784
PmlI	CACGTG	2 cut(s)	1498, 1784
PpsI	GAGTC	4 cut(s)	670, 1526, 1849, 2355
Ppu21I	YACGTR	3 cut(s)	1498, 1691, 1784
PscI	ACATGT	3 cut(s)	974, 1557, 2220
PsiI	TTATAA	2 cut(s)	2445, 2967
Psp6I	CCWGG	1 cut(s)	526
PspCI	CACGTG	2 cut(s)	1498, 1784
PspFI	CCCAGC	2 cut(s)	1192, 2058
PspGI	CCWGG	1 cut(s)	526
PspN4I	GGNNCC	9 cut(s)	471, 525, 786, 809, 987, 1067, 1674, 1901, 2414
PspPI	GGNCC	3 cut(s)	470, 2150, 2371
PspXI	VCTCGAGB	1 cut(s)	2108
PsrI	GAACNNNNNNTAC	2 cut(s)	2280, 2312
PstI	CTGCAG	2 cut(s)	1312, 2709
PstNI	CAGNNNCTG	1 cut(s)	2546
PsuI	RGATCY	4 cut(s)	985, 1103, 2412, 2813
PsyI	GACNNNGTC	1 cut(s)	257
PvuII	CAGCTG	3 cut(s)	1607, 1796, 3155
RsaI	GTAC	7 cut(s)	894, 1053, 1303, 1674, 1689, 1693, 1901
RsaNI	GTAC	7 cut(s)	893, 1052, 1302, 1673, 1688, 1692, 1900
RseI	CAYNNNNRTG	5 cut(s)	51, 706, 1434, 1711, 2126
SaqAI	TTAA	8 cut(s)	111, 119, 1380, 1599, 1935, 2975, 3006, 3129
Sau96I	GGNCC	3 cut(s)	470, 2150, 2371
ScaI	AGTACT	1 cut(s)	1303
SchI	GAGTC	4 cut(s)	671, 1526, 1850, 2356
ScrFI	CCNGG	5 cut(s)	442, 528, 686, 687, 1724
SduI	GDGCHC	2 cut(s)	526, 1511
SfcI	CTRYAG	2 cut(s)	1308, 2705
SfoI	GGCGCC	1 cut(s)	809
Sfr274I	CTCGAG	2 cut(s)	1823, 2108
SfuI	TTCGAA	1 cut(s)	436
SinI	GGWCC	2 cut(s)	2150, 2371
SlaI	CTCGAG	2 cut(s)	1823, 2108
SmaI	CCCGGG	1 cut(s)	687
SmiMI	CAYNNNNRTG	5 cut(s)	51, 706, 1434, 1711, 2126
SmlI	CTYRAG	3 cut(s)	28, 1823, 2108
SmoI	CTYRAG	3 cut(s)	28, 1823, 2108
SnaBI	TACGTA	1 cut(s)	1691
SspDI	GGCGCC	1 cut(s)	807
SspI	AATATT	2 cut(s)	586, 1804
SspMI	CTAG	3 cut(s)	239, 387, 882
StyD4I	CCNGG	5 cut(s)	440, 526, 684, 685, 1722
StyI	CCWWGG	5 cut(s)	1157, 1536, 2127, 2423, 2721
TaaI	ACNGT	5 cut(s)	1051, 1595, 1672, 1696, 2837
TaiI	ACGT	6 cut(s)	710, 1463, 1500, 1693, 1786, 2645
TaqI	TCGA	5 cut(s)	436, 874, 1824, 1851, 2109
TaqII	GACCGA	1 cut(s)	2359
TatI	WGTACW	2 cut(s)	1051, 1301
TauI	GCSGC	4 cut(s)	351, 394, 555, 1947
TfiI	GAWTC	6 cut(s)	163, 280, 540, 2051, 2479, 3144
Tru1I	TTAA	8 cut(s)	111, 119, 1380, 1599, 1935, 2975, 3006, 3129
Tru9I	TTAA	8 cut(s)	111, 119, 1380, 1599, 1935, 2975, 3006, 3129
TscAI	CASTG	6 cut(s)	708, 903, 1713, 2527, 2842, 3139
TseFI	GTSAC	5 cut(s)	608, 1529, 1666, 2738, 3073
Tsp45I	GTSAC	5 cut(s)	608, 1529, 1666, 2738, 3073
TspGWI	ACGGA	1 cut(s)	2474
TspMI	CCCGGG	1 cut(s)	685
TspRI	CASTG	6 cut(s)	708, 903, 1713, 2527, 2842, 3139
Tth111I	GACNNNGTC	1 cut(s)	257
Van91I	CCANNNNNTGG	2 cut(s)	902, 1682
VpaK11BI	GGWCC	2 cut(s)	2150, 2371
XagI	CCTNNNNNAGG	1 cut(s)	1753
XapI	RAATTY	9 cut(s)	619, 1117, 1218, 1339, 1362, 1769, 2115, 2137, 2365
XceI	RCATGY	3 cut(s)	978, 1561, 2224
XhoI	CTCGAG	2 cut(s)	1823, 2108
XmaI	CCCGGG	1 cut(s)	685
XmiI	GTMKAC	1 cut(s)	2891
XmnI	GAANNNNTTC	2 cut(s)	632, 774
XspI	CTAG	3 cut(s)	239, 387, 882
ZrmI	AGTACT	1 cut(s)	1303

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.